##gff-version 3
CHM13_chrY	CAT	gene	77271	78619	.	+	.	source_gene_common_name=ENSG00000292329;source_gene=ENSG00000292329.1;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;gene_id=CHM13_chrY_G0000001;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000292329;gene_sources=liftoff;ID=CHM13_chrY_G0000001;Name=ENSG00000292329
CHM13_chrY	CAT	transcript	77271	78619	1000	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=CHM13_chrY_T0000001;gene_id=CHM13_chrY_G0000001;Parent=CHM13_chrY_G0000001;transcript_name=CHM13_chrY_T0000001;gene_name=ENSG00000292329;ID=CHM13_chrY_T0000001;Name=ENSG00000292329
CHM13_chrY	CAT	exon	77271	77374	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=CHM13_chrY_T0000001;gene_id=CHM13_chrY_G0000001;Parent=CHM13_chrY_T0000001;transcript_name=CHM13_chrY_T0000001;gene_name=ENSG00000292329;ID=exon:CHM13_chrY_T0000001:0;Name=ENSG00000292329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	77375	78464	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=CHM13_chrY_T0000001;gene_id=CHM13_chrY_G0000001;Parent=CHM13_chrY_T0000001;transcript_name=CHM13_chrY_T0000001;gene_name=ENSG00000292329;ID=intron:CHM13_chrY_T0000001:0;Name=ENSG00000292329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	78465	78619	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=CHM13_chrY_T0000001;gene_id=CHM13_chrY_G0000001;Parent=CHM13_chrY_T0000001;transcript_name=CHM13_chrY_T0000001;gene_name=ENSG00000292329;ID=exon:CHM13_chrY_T0000001:1;Name=ENSG00000292329;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	91516	103937	.	-	.	source_gene_common_name=ENSG00000310553;source_gene=ENSG00000310553.1;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;gene_id=CHM13_chrY_G0000002;gene_biotype=lncRNA;gene_name=ENSG00000310553;gene_sources=liftoff;ID=CHM13_chrY_G0000002;Name=ENSG00000310553
CHM13_chrY	CAT	transcript	91516	103937	1000	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=CHM13_chrY_T0000002;gene_id=CHM13_chrY_G0000002;Parent=CHM13_chrY_G0000002;transcript_name=CHM13_chrY_T0000002;gene_name=ENSG00000310553;ID=CHM13_chrY_T0000002;Name=ENSG00000310553
CHM13_chrY	CAT	exon	91516	91707	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=CHM13_chrY_T0000002;gene_id=CHM13_chrY_G0000002;Parent=CHM13_chrY_T0000002;transcript_name=CHM13_chrY_T0000002;gene_name=ENSG00000310553;ID=exon:CHM13_chrY_T0000002:0;Name=ENSG00000310553;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	91708	103409	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=CHM13_chrY_T0000002;gene_id=CHM13_chrY_G0000002;Parent=CHM13_chrY_T0000002;transcript_name=CHM13_chrY_T0000002;gene_name=ENSG00000310553;ID=intron:CHM13_chrY_T0000002:0;Name=ENSG00000310553;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	103410	103548	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=CHM13_chrY_T0000002;gene_id=CHM13_chrY_G0000002;Parent=CHM13_chrY_T0000002;transcript_name=CHM13_chrY_T0000002;gene_name=ENSG00000310553;ID=exon:CHM13_chrY_T0000002:1;Name=ENSG00000310553;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	103549	103788	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=CHM13_chrY_T0000002;gene_id=CHM13_chrY_G0000002;Parent=CHM13_chrY_T0000002;transcript_name=CHM13_chrY_T0000002;gene_name=ENSG00000310553;ID=intron:CHM13_chrY_T0000002:1;Name=ENSG00000310553;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	103789	103937	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1,ENST00000850732.1;transcript_id=CHM13_chrY_T0000002;gene_id=CHM13_chrY_G0000002;Parent=CHM13_chrY_T0000002;transcript_name=CHM13_chrY_T0000002;gene_name=ENSG00000310553;ID=exon:CHM13_chrY_T0000002:2;Name=ENSG00000310553;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	104049	130734	.	+	.	source_gene_common_name=PLCXD1;source_gene=ENSG00000292344.1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;gene_id=CHM13_chrY_G0000003;gene_biotype=protein_coding;gene_name=PLCXD1;gene_sources=liftoff,transMap,transMap_pairwise;ID=CHM13_chrY_G0000003;Name=PLCXD1
CHM13_chrY	CAT	transcript	104049	130731	100	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_G0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=CHM13_chrY_T0000003;Name=PLCXD1
CHM13_chrY	CAT	exon	104049	104121	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	104122	109051	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	109052	109254	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	109255	111946	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	111947	112094	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	111968	112094	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	111968	111970	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=start_codon:CHM13_chrY_T0000003;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	112095	116730	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	116731	116867	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	116731	116867	.	+	2	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	116868	118645	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	118646	118774	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	118646	118774	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	118775	119372	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	119373	119528	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	119373	119528	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	119529	120908	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	120909	121092	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	120909	121092	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	121093	126472	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	126473	130731	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000003:7;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	126473	126711	.	+	2	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	126709	126711	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=CHM13_chrY_T0000003;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000003;transcript_name=CHM13_chrY_T0000003;gene_name=PLCXD1;ID=stop_codon:CHM13_chrY_T0000003;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	104051	119411	1000	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=CHM13_chrY_T0000004;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_G0000003;transcript_name=CHM13_chrY_T0000004;gene_name=PLCXD1;ID=CHM13_chrY_T0000004;Name=PLCXD1
CHM13_chrY	CAT	exon	104051	104121	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=CHM13_chrY_T0000004;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000004;transcript_name=CHM13_chrY_T0000004;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	104122	111946	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=CHM13_chrY_T0000004;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000004;transcript_name=CHM13_chrY_T0000004;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	111947	112094	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=CHM13_chrY_T0000004;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000004;transcript_name=CHM13_chrY_T0000004;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	112095	116730	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=CHM13_chrY_T0000004;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000004;transcript_name=CHM13_chrY_T0000004;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	116731	116867	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=CHM13_chrY_T0000004;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000004;transcript_name=CHM13_chrY_T0000004;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	116868	118645	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=CHM13_chrY_T0000004;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000004;transcript_name=CHM13_chrY_T0000004;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	118646	118790	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=CHM13_chrY_T0000004;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000004;transcript_name=CHM13_chrY_T0000004;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	118791	119372	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=CHM13_chrY_T0000004;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000004;transcript_name=CHM13_chrY_T0000004;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	119373	119411	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=299.63;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=CHM13_chrY_T0000004;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000004;transcript_name=CHM13_chrY_T0000004;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	104080	119503	100	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_G0000003;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=CHM13_chrY_T0000005;Name=PLCXD1
CHM13_chrY	CAT	exon	104080	104121	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	104122	111946	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	111947	112094	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	111968	112094	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	111968	111970	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=start_codon:CHM13_chrY_T0000005;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	112095	116730	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	116731	116867	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	116731	116867	.	+	2	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	116868	118645	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	118646	118774	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	118646	118774	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	118775	119372	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	119373	119503	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	119373	119503	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=CHM13_chrY_T0000005;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000005;transcript_name=CHM13_chrY_T0000005;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	108624	116867	100	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000007;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_G0000003;transcript_name=CHM13_chrY_T0000007;gene_name=PLCXD1;ID=CHM13_chrY_T0000007;Name=PLCXD1
CHM13_chrY	CAT	exon	108624	108691	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000007;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000007;transcript_name=CHM13_chrY_T0000007;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	108692	109051	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000007;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000007;transcript_name=CHM13_chrY_T0000007;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	109052	109254	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000007;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000007;transcript_name=CHM13_chrY_T0000007;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	109255	111946	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000007;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000007;transcript_name=CHM13_chrY_T0000007;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	111947	112094	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000007;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000007;transcript_name=CHM13_chrY_T0000007;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	111968	112094	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000007;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000007;transcript_name=CHM13_chrY_T0000007;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	111968	111970	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000007;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000007;transcript_name=CHM13_chrY_T0000007;gene_name=PLCXD1;ID=start_codon:CHM13_chrY_T0000007;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	112095	116730	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000007;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000007;transcript_name=CHM13_chrY_T0000007;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	116731	116867	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000007;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000007;transcript_name=CHM13_chrY_T0000007;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000007:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	116731	116867	.	+	2	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000007;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000007;transcript_name=CHM13_chrY_T0000007;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	108667	116867	9720	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000008;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_G0000003;transcript_name=CHM13_chrY_T0000008;gene_name=PLCXD1;ID=CHM13_chrY_T0000008;Name=PLCXD1
CHM13_chrY	CAT	exon	108667	108691	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000008;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000008;transcript_name=CHM13_chrY_T0000008;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	108692	109051	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000008;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000008;transcript_name=CHM13_chrY_T0000008;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	109052	109254	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000008;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000008;transcript_name=CHM13_chrY_T0000008;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	109255	111946	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000008;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000008;transcript_name=CHM13_chrY_T0000008;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	111947	112094	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000008;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000008;transcript_name=CHM13_chrY_T0000008;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	111968	112094	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000008;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000008;transcript_name=CHM13_chrY_T0000008;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	111968	111970	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000008;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000008;transcript_name=CHM13_chrY_T0000008;gene_name=PLCXD1;ID=start_codon:CHM13_chrY_T0000008;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	112095	116730	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000008;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000008;transcript_name=CHM13_chrY_T0000008;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	116731	116867	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000008;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000008;transcript_name=CHM13_chrY_T0000008;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	116731	116867	.	+	2	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000008;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000008;transcript_name=CHM13_chrY_T0000008;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	108672	116867	9720	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000009;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_G0000003;transcript_name=CHM13_chrY_T0000009;gene_name=PLCXD1;ID=CHM13_chrY_T0000009;Name=PLCXD1
CHM13_chrY	CAT	exon	108672	108691	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000009;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000009;transcript_name=CHM13_chrY_T0000009;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	108692	109051	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000009;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000009;transcript_name=CHM13_chrY_T0000009;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	109052	109254	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000009;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000009;transcript_name=CHM13_chrY_T0000009;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	109255	111946	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000009;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000009;transcript_name=CHM13_chrY_T0000009;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	111947	112094	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000009;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000009;transcript_name=CHM13_chrY_T0000009;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	111968	112094	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000009;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000009;transcript_name=CHM13_chrY_T0000009;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	111968	111970	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000009;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000009;transcript_name=CHM13_chrY_T0000009;gene_name=PLCXD1;ID=start_codon:CHM13_chrY_T0000009;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	112095	116730	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000009;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000009;transcript_name=CHM13_chrY_T0000009;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	116731	116867	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000009;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000009;transcript_name=CHM13_chrY_T0000009;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000009:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	116731	116867	.	+	2	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711181.1;transcript_score=199.62099999999998;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;transcript_id=CHM13_chrY_T0000009;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000009;transcript_name=CHM13_chrY_T0000009;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	108764	116785	100	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=CHM13_chrY_T0000010;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_G0000003;transcript_name=CHM13_chrY_T0000010;gene_name=PLCXD1;ID=CHM13_chrY_T0000010;Name=PLCXD1
CHM13_chrY	CAT	exon	108764	108826	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=CHM13_chrY_T0000010;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000010;transcript_name=CHM13_chrY_T0000010;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	108827	109051	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=CHM13_chrY_T0000010;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000010;transcript_name=CHM13_chrY_T0000010;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	109052	109254	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=CHM13_chrY_T0000010;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000010;transcript_name=CHM13_chrY_T0000010;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	109255	111946	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=CHM13_chrY_T0000010;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000010;transcript_name=CHM13_chrY_T0000010;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	111947	112094	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=CHM13_chrY_T0000010;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000010;transcript_name=CHM13_chrY_T0000010;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	111968	112094	.	+	0	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=CHM13_chrY_T0000010;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000010;transcript_name=CHM13_chrY_T0000010;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	111968	111970	.	+	0	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=CHM13_chrY_T0000010;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000010;transcript_name=CHM13_chrY_T0000010;gene_name=PLCXD1;ID=start_codon:CHM13_chrY_T0000010;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	112095	116730	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=CHM13_chrY_T0000010;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000010;transcript_name=CHM13_chrY_T0000010;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	116731	116785	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=CHM13_chrY_T0000010;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000010;transcript_name=CHM13_chrY_T0000010;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	116731	116785	.	+	2	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=CHM13_chrY_T0000010;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000010;transcript_name=CHM13_chrY_T0000010;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	108951	130734	100	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_G0000003;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=CHM13_chrY_T0000011;Name=PLCXD1
CHM13_chrY	CAT	exon	108951	109254	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	109255	111946	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	111947	112094	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	111968	112094	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	111968	111970	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=start_codon:CHM13_chrY_T0000011;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	112095	116730	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	116731	116867	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	116731	116867	.	+	2	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	116868	118645	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	118646	118774	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	118646	118774	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	118775	119372	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	119373	119528	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	119373	119528	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	119529	120908	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	120909	121092	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	120909	121092	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	121093	126472	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	126473	130734	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000011:6;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	126473	126711	.	+	2	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	126709	126711	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=CHM13_chrY_T0000011;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000011;transcript_name=CHM13_chrY_T0000011;gene_name=PLCXD1;ID=stop_codon:CHM13_chrY_T0000011;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	110719	116827	100	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=CHM13_chrY_T0000012;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_G0000003;transcript_name=CHM13_chrY_T0000012;gene_name=PLCXD1;ID=CHM13_chrY_T0000012;Name=PLCXD1
CHM13_chrY	CAT	exon	110719	110757	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=CHM13_chrY_T0000012;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000012;transcript_name=CHM13_chrY_T0000012;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	110758	111946	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=CHM13_chrY_T0000012;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000012;transcript_name=CHM13_chrY_T0000012;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	111947	112094	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=CHM13_chrY_T0000012;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000012;transcript_name=CHM13_chrY_T0000012;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	111968	112094	.	+	0	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=CHM13_chrY_T0000012;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000012;transcript_name=CHM13_chrY_T0000012;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	111968	111970	.	+	0	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=CHM13_chrY_T0000012;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000012;transcript_name=CHM13_chrY_T0000012;gene_name=PLCXD1;ID=start_codon:CHM13_chrY_T0000012;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	112095	116730	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=CHM13_chrY_T0000012;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000012;transcript_name=CHM13_chrY_T0000012;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	116731	116827	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=CHM13_chrY_T0000012;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000012;transcript_name=CHM13_chrY_T0000012;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	116731	116827	.	+	2	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=CHM13_chrY_T0000012;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000012;transcript_name=CHM13_chrY_T0000012;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	111022	119513	100	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_G0000003;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=CHM13_chrY_T0000013;Name=PLCXD1
CHM13_chrY	CAT	exon	111022	111045	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	111046	111946	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	111947	112094	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	111968	112094	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	111968	111970	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=start_codon:CHM13_chrY_T0000013;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	112095	116730	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	116731	116867	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	116731	116867	.	+	2	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	116868	118645	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	118646	118774	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000013:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	118646	118774	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	118775	119372	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000013:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	119373	119513	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000013:4;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	119373	119513	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=CHM13_chrY_T0000013;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000013;transcript_name=CHM13_chrY_T0000013;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000013:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	111036	119503	100	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_G0000003;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=CHM13_chrY_T0000014;Name=PLCXD1
CHM13_chrY	CAT	exon	111036	111077	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000014:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	111078	111946	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000014:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	111947	112094	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000014:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	111968	112094	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000014:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	111968	111970	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=start_codon:CHM13_chrY_T0000014;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	112095	116730	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000014:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	116731	116867	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000014:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	116731	116867	.	+	2	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000014:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	116868	118645	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000014:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	118646	118774	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000014:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	118646	118774	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000014:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	118775	119372	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000014:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	119373	119503	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000014:4;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	119373	119503	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=CHM13_chrY_T0000014;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000014;transcript_name=CHM13_chrY_T0000014;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000014:3;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	111515	118755	100	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=CHM13_chrY_T0000015;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_G0000003;transcript_name=CHM13_chrY_T0000015;gene_name=PLCXD1;ID=CHM13_chrY_T0000015;Name=PLCXD1
CHM13_chrY	CAT	exon	111515	112094	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=CHM13_chrY_T0000015;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000015;transcript_name=CHM13_chrY_T0000015;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000015:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	111968	112094	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=CHM13_chrY_T0000015;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000015;transcript_name=CHM13_chrY_T0000015;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000015:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	111968	111970	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=CHM13_chrY_T0000015;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000015;transcript_name=CHM13_chrY_T0000015;gene_name=PLCXD1;ID=start_codon:CHM13_chrY_T0000015;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	112095	116730	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=CHM13_chrY_T0000015;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000015;transcript_name=CHM13_chrY_T0000015;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000015:0;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	116731	116867	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=CHM13_chrY_T0000015;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000015;transcript_name=CHM13_chrY_T0000015;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000015:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	116731	116867	.	+	2	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=CHM13_chrY_T0000015;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000015;transcript_name=CHM13_chrY_T0000015;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000015:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	116868	118645	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=CHM13_chrY_T0000015;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000015;transcript_name=CHM13_chrY_T0000015;gene_name=PLCXD1;ID=intron:CHM13_chrY_T0000015:1;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	118646	118755	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=CHM13_chrY_T0000015;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000015;transcript_name=CHM13_chrY_T0000015;gene_name=PLCXD1;ID=exon:CHM13_chrY_T0000015:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	118646	118755	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=CHM13_chrY_T0000015;gene_id=CHM13_chrY_G0000003;Parent=CHM13_chrY_T0000015;transcript_name=CHM13_chrY_T0000015;gene_name=PLCXD1;ID=CDS:CHM13_chrY_T0000015:2;Name=PLCXD1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	106673	109395	.	-	.	source_gene_common_name=ENSG00000310554;source_gene=ENSG00000310554.1;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;gene_id=CHM13_chrY_G0000004;gene_biotype=lncRNA;gene_name=ENSG00000310554;gene_sources=liftoff;ID=CHM13_chrY_G0000004;Name=ENSG00000310554
CHM13_chrY	CAT	transcript	106673	109395	1000	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.743;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=CHM13_chrY_T0000006;gene_id=CHM13_chrY_G0000004;Parent=CHM13_chrY_G0000004;transcript_name=CHM13_chrY_T0000006;gene_name=ENSG00000310554;ID=CHM13_chrY_T0000006;Name=ENSG00000310554
CHM13_chrY	CAT	exon	106673	107499	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=CHM13_chrY_T0000006;gene_id=CHM13_chrY_G0000004;Parent=CHM13_chrY_T0000006;transcript_name=CHM13_chrY_T0000006;gene_name=ENSG00000310554;ID=exon:CHM13_chrY_T0000006:0;Name=ENSG00000310554;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	107500	109055	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=CHM13_chrY_T0000006;gene_id=CHM13_chrY_G0000004;Parent=CHM13_chrY_T0000006;transcript_name=CHM13_chrY_T0000006;gene_name=ENSG00000310554;ID=intron:CHM13_chrY_T0000006:0;Name=ENSG00000310554;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	109056	109395	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=CHM13_chrY_T0000006;gene_id=CHM13_chrY_G0000004;Parent=CHM13_chrY_T0000006;transcript_name=CHM13_chrY_T0000006;gene_name=ENSG00000310554;ID=exon:CHM13_chrY_T0000006:1;Name=ENSG00000310554;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	130724	148939	.	-	.	source_gene_common_name=GTPBP6;source_gene=ENSG00000292358.2;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;gene_id=CHM13_chrY_G0000005;gene_biotype=protein_coding;gene_name=GTPBP6;gene_sources=liftoff,transMap,transMap_pairwise;ID=CHM13_chrY_G0000005;Name=GTPBP6
CHM13_chrY	CAT	transcript	130724	148939	100	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_G0000005;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=CHM13_chrY_T0000016;Name=GTPBP6
CHM13_chrY	CAT	exon	130724	132575	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	132452	132575	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	132452	132454	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=stop_codon:CHM13_chrY_T0000016;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	132576	134737	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	134738	134890	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	134738	134890	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	134891	135109	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	135110	135258	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	135110	135258	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	135259	138796	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	138797	139005	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	138797	139005	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	139006	140246	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	140247	140405	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	140247	140405	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	140406	141630	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	141631	141698	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	141631	141698	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	141699	142370	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	142371	142501	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	142371	142501	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	142502	142706	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	142707	142777	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	142707	142777	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	142778	147055	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	147056	147193	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	147056	147193	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	147194	148579	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	148580	148939	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000016:9;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	148580	148928	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000016:9;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	148926	148928	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=CHM13_chrY_T0000016;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000016;transcript_name=CHM13_chrY_T0000016;gene_name=GTPBP6;ID=start_codon:CHM13_chrY_T0000016;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	131907	139938	1000	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000017;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_G0000005;transcript_name=CHM13_chrY_T0000017;gene_name=GTPBP6;ID=CHM13_chrY_T0000017;Name=GTPBP6
CHM13_chrY	CAT	exon	131907	132575	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000017;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000017;transcript_name=CHM13_chrY_T0000017;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	132576	134737	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000017;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000017;transcript_name=CHM13_chrY_T0000017;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	134738	134890	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000017;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000017;transcript_name=CHM13_chrY_T0000017;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	134891	135109	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000017;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000017;transcript_name=CHM13_chrY_T0000017;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	135110	135258	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000017;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000017;transcript_name=CHM13_chrY_T0000017;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	135259	138796	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000017;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000017;transcript_name=CHM13_chrY_T0000017;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	138797	139520	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000017;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000017;transcript_name=CHM13_chrY_T0000017;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	139521	139617	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000017;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000017;transcript_name=CHM13_chrY_T0000017;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	139618	139938	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000017;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000017;transcript_name=CHM13_chrY_T0000017;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	131907	139938	1000	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000018;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_G0000005;transcript_name=CHM13_chrY_T0000018;gene_name=GTPBP6;ID=CHM13_chrY_T0000018;Name=GTPBP6
CHM13_chrY	CAT	exon	131907	132575	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000018;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000018;transcript_name=CHM13_chrY_T0000018;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000018:0;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	132576	134737	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000018;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000018;transcript_name=CHM13_chrY_T0000018;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000018:0;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	134738	134890	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000018;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000018;transcript_name=CHM13_chrY_T0000018;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000018:1;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	134891	135109	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000018;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000018;transcript_name=CHM13_chrY_T0000018;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000018:1;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	135110	135258	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000018;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000018;transcript_name=CHM13_chrY_T0000018;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000018:2;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	135259	138796	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000018;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000018;transcript_name=CHM13_chrY_T0000018;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000018:2;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	138797	139571	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000018;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000018;transcript_name=CHM13_chrY_T0000018;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000018:3;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	139572	139668	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000018;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000018;transcript_name=CHM13_chrY_T0000018;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000018:3;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	139669	139938	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000018;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000018;transcript_name=CHM13_chrY_T0000018;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000018:4;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	131907	139938	1000	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000019;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_G0000005;transcript_name=CHM13_chrY_T0000019;gene_name=GTPBP6;ID=CHM13_chrY_T0000019;Name=GTPBP6
CHM13_chrY	CAT	exon	131907	132575	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000019;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000019;transcript_name=CHM13_chrY_T0000019;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000019:0;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	132576	134737	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000019;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000019;transcript_name=CHM13_chrY_T0000019;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000019:0;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	134738	134890	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000019;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000019;transcript_name=CHM13_chrY_T0000019;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000019:1;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	134891	135109	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000019;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000019;transcript_name=CHM13_chrY_T0000019;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000019:1;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	135110	135258	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000019;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000019;transcript_name=CHM13_chrY_T0000019;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000019:2;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	135259	138796	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000019;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000019;transcript_name=CHM13_chrY_T0000019;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000019:2;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	138797	139938	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=274.504;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;transcript_id=CHM13_chrY_T0000019;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000019;transcript_name=CHM13_chrY_T0000019;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000019:3;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	132137	148937	100	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_G0000005;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=CHM13_chrY_T0000020;Name=GTPBP6
CHM13_chrY	CAT	exon	132137	132575	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000020:0;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	132452	132575	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000020:0;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	132452	132454	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=stop_codon:CHM13_chrY_T0000020;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	132576	134737	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000020:0;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	134738	134890	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000020:1;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	134738	134890	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000020:1;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	134891	135109	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000020:1;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	135110	135258	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000020:2;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	135110	135258	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000020:2;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	135259	138796	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000020:2;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	138797	139005	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000020:3;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	138797	139005	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000020:3;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	139006	140246	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000020:3;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	140247	140405	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000020:4;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	140247	140405	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000020:4;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	140406	141630	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000020:4;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	141631	141698	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000020:5;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	141631	141698	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000020:5;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	141699	142370	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000020:5;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	142371	142501	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000020:6;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	142371	142501	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000020:6;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	142502	142706	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000020:6;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	142707	142777	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000020:7;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	142707	142777	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000020:7;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	142778	147055	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000020:7;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	147056	147193	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000020:8;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	147056	147193	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000020:8;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	147194	148579	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=intron:CHM13_chrY_T0000020:8;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	148580	148937	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=exon:CHM13_chrY_T0000020:9;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	148580	148928	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=CDS:CHM13_chrY_T0000020:9;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	148926	148928	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=CHM13_chrY_T0000020;gene_id=CHM13_chrY_G0000005;Parent=CHM13_chrY_T0000020;transcript_name=CHM13_chrY_T0000020;gene_name=GTPBP6;ID=start_codon:CHM13_chrY_T0000020;Name=GTPBP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	151128	153908	.	+	.	source_gene_common_name=LINC00685;source_gene=ENSG00000292342.1;gene_id=CHM13_chrY_G0000006;gene_biotype=lncRNA;gene_name=LINC00685;gene_sources=liftoff,transMap,transMap_pairwise;ID=CHM13_chrY_G0000006;Name=LINC00685
CHM13_chrY	CAT	transcript	151128	151848	1000	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=CHM13_chrY_T0000021;gene_id=CHM13_chrY_G0000006;Parent=CHM13_chrY_G0000006;transcript_name=CHM13_chrY_T0000021;gene_name=LINC00685;ID=CHM13_chrY_T0000021;Name=LINC00685
CHM13_chrY	CAT	exon	151128	151386	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=CHM13_chrY_T0000021;gene_id=CHM13_chrY_G0000006;Parent=CHM13_chrY_T0000021;transcript_name=CHM13_chrY_T0000021;gene_name=LINC00685;ID=exon:CHM13_chrY_T0000021:0;Name=LINC00685;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	151387	151764	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=CHM13_chrY_T0000021;gene_id=CHM13_chrY_G0000006;Parent=CHM13_chrY_T0000021;transcript_name=CHM13_chrY_T0000021;gene_name=LINC00685;ID=intron:CHM13_chrY_T0000021:0;Name=LINC00685;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	151765	151848	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=CHM13_chrY_T0000021;gene_id=CHM13_chrY_G0000006;Parent=CHM13_chrY_T0000021;transcript_name=CHM13_chrY_T0000021;gene_name=LINC00685;ID=exon:CHM13_chrY_T0000021:1;Name=LINC00685;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	151128	153908	1000	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=CHM13_chrY_T0000022;gene_id=CHM13_chrY_G0000006;Parent=CHM13_chrY_G0000006;transcript_name=CHM13_chrY_T0000022;gene_name=LINC00685;ID=CHM13_chrY_T0000022;Name=LINC00685
CHM13_chrY	CAT	exon	151128	151386	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=CHM13_chrY_T0000022;gene_id=CHM13_chrY_G0000006;Parent=CHM13_chrY_T0000022;transcript_name=CHM13_chrY_T0000022;gene_name=LINC00685;ID=exon:CHM13_chrY_T0000022:0;Name=LINC00685;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	151387	153739	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=CHM13_chrY_T0000022;gene_id=CHM13_chrY_G0000006;Parent=CHM13_chrY_T0000022;transcript_name=CHM13_chrY_T0000022;gene_name=LINC00685;ID=intron:CHM13_chrY_T0000022:0;Name=LINC00685;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	153740	153908	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=CHM13_chrY_T0000022;gene_id=CHM13_chrY_G0000006;Parent=CHM13_chrY_T0000022;transcript_name=CHM13_chrY_T0000022;gene_name=LINC00685;ID=exon:CHM13_chrY_T0000022:1;Name=LINC00685;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	151128	152002	1000	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=CHM13_chrY_T0000023;gene_id=CHM13_chrY_G0000006;Parent=CHM13_chrY_G0000006;transcript_name=CHM13_chrY_T0000023;gene_name=LINC00685;ID=CHM13_chrY_T0000023;Name=LINC00685
CHM13_chrY	CAT	exon	151128	151386	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=CHM13_chrY_T0000023;gene_id=CHM13_chrY_G0000006;Parent=CHM13_chrY_T0000023;transcript_name=CHM13_chrY_T0000023;gene_name=LINC00685;ID=exon:CHM13_chrY_T0000023:0;Name=LINC00685;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	151387	151819	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=CHM13_chrY_T0000023;gene_id=CHM13_chrY_G0000006;Parent=CHM13_chrY_T0000023;transcript_name=CHM13_chrY_T0000023;gene_name=LINC00685;ID=intron:CHM13_chrY_T0000023:0;Name=LINC00685;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	151820	152002	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=CHM13_chrY_T0000023;gene_id=CHM13_chrY_G0000006;Parent=CHM13_chrY_T0000023;transcript_name=CHM13_chrY_T0000023;gene_name=LINC00685;ID=exon:CHM13_chrY_T0000023:1;Name=LINC00685;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	168543	224853	.	-	.	source_gene_common_name=PPP2R3B;source_gene=ENSG00000292327.1;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;gene_id=CHM13_chrY_G0000007;gene_biotype=protein_coding;gene_name=PPP2R3B;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000007;Name=PPP2R3B
CHM13_chrY	CAT	transcript	168543	224805	100	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_G0000007;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CHM13_chrY_T0000024;Name=PPP2R3B
CHM13_chrY	CAT	exon	168543	169127	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	168977	169127	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	168977	168979	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=stop_codon:CHM13_chrY_T0000024;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	169128	173213	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	173214	173320	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	173214	173320	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	173321	173387	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	173388	173506	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	173388	173506	.	-	2	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	173507	175391	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	175392	175567	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	175392	175567	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	175568	175933	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	175934	176023	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	175934	176023	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	176024	176509	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	176510	176558	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	176510	176558	.	-	2	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	176559	180169	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	180170	180326	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	180170	180326	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	180327	180827	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	180828	180914	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	180828	180914	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	180915	181354	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	181355	181429	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	181355	181429	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	181430	181887	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	181888	181990	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	181888	181990	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	181991	182243	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	182244	182347	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	182244	182347	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	182348	196336	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	196337	196522	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	196337	196522	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	196523	224265	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	224266	224805	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000024:12;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	224266	224589	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000024:12;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	224587	224589	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=CHM13_chrY_T0000024;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000024;transcript_name=CHM13_chrY_T0000024;gene_name=PPP2R3B;ID=start_codon:CHM13_chrY_T0000024;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	168845	176338	1000	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=CHM13_chrY_T0000025;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_G0000007;transcript_name=CHM13_chrY_T0000025;gene_name=PPP2R3B;ID=CHM13_chrY_T0000025;Name=PPP2R3B
CHM13_chrY	CAT	exon	168845	169127	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=CHM13_chrY_T0000025;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000025;transcript_name=CHM13_chrY_T0000025;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	169128	173213	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=CHM13_chrY_T0000025;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000025;transcript_name=CHM13_chrY_T0000025;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	173214	173506	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=CHM13_chrY_T0000025;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000025;transcript_name=CHM13_chrY_T0000025;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	173507	175391	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=CHM13_chrY_T0000025;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000025;transcript_name=CHM13_chrY_T0000025;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	175392	175567	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=CHM13_chrY_T0000025;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000025;transcript_name=CHM13_chrY_T0000025;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	175568	175933	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=CHM13_chrY_T0000025;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000025;transcript_name=CHM13_chrY_T0000025;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	175934	176338	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=CHM13_chrY_T0000025;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000025;transcript_name=CHM13_chrY_T0000025;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	168845	176338	1000	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000026;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_G0000007;transcript_name=CHM13_chrY_T0000026;gene_name=PPP2R3B;ID=CHM13_chrY_T0000026;Name=PPP2R3B
CHM13_chrY	CAT	exon	168845	169127	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000026;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000026;transcript_name=CHM13_chrY_T0000026;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	169128	173213	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000026;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000026;transcript_name=CHM13_chrY_T0000026;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	173214	173320	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000026;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000026;transcript_name=CHM13_chrY_T0000026;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	173321	173387	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000026;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000026;transcript_name=CHM13_chrY_T0000026;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	173388	173506	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000026;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000026;transcript_name=CHM13_chrY_T0000026;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	173507	175391	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000026;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000026;transcript_name=CHM13_chrY_T0000026;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	175392	175567	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000026;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000026;transcript_name=CHM13_chrY_T0000026;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	175568	175933	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000026;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000026;transcript_name=CHM13_chrY_T0000026;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	175934	176338	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000026;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000026;transcript_name=CHM13_chrY_T0000026;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	168849	181978	1000	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_G0000007;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=CHM13_chrY_T0000027;Name=PPP2R3B
CHM13_chrY	CAT	exon	168849	173506	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000027;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	173507	175391	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000027;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	175392	175567	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000027;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	175568	175933	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000027;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	175934	176558	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000027;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	176559	180169	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000027;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	180170	180326	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000027;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	180327	180827	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000027;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	180828	180914	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000027;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	180915	181354	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000027;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	181355	181429	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000027;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	181430	181887	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000027;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	181888	181978	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=CHM13_chrY_T0000027;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000027;transcript_name=CHM13_chrY_T0000027;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000027:6;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	168849	181978	1000	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_G0000007;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=CHM13_chrY_T0000028;Name=PPP2R3B
CHM13_chrY	CAT	exon	168849	173320	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000028:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	173321	173387	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000028:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	173388	173506	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000028:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	173507	175391	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000028:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	175392	175567	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000028:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	175568	175933	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000028:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	175934	176558	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000028:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	176559	180169	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000028:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	180170	180326	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000028:4;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	180327	180827	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000028:4;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	180828	180914	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000028:5;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	180915	181354	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000028:5;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	181355	181429	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000028:6;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	181430	181887	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000028:6;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	181888	181978	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=CHM13_chrY_T0000028;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000028;transcript_name=CHM13_chrY_T0000028;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000028:7;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	173223	180283	1000	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=CHM13_chrY_T0000029;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_G0000007;transcript_name=CHM13_chrY_T0000029;gene_name=PPP2R3B;ID=CHM13_chrY_T0000029;Name=PPP2R3B
CHM13_chrY	CAT	exon	173223	173506	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=CHM13_chrY_T0000029;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000029;transcript_name=CHM13_chrY_T0000029;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000029:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	173507	175391	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=CHM13_chrY_T0000029;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000029;transcript_name=CHM13_chrY_T0000029;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000029:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	175392	175567	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=CHM13_chrY_T0000029;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000029;transcript_name=CHM13_chrY_T0000029;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000029:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	175568	175933	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=CHM13_chrY_T0000029;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000029;transcript_name=CHM13_chrY_T0000029;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000029:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	175934	176023	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=CHM13_chrY_T0000029;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000029;transcript_name=CHM13_chrY_T0000029;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000029:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	176024	176509	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=CHM13_chrY_T0000029;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000029;transcript_name=CHM13_chrY_T0000029;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000029:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	176510	176558	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=CHM13_chrY_T0000029;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000029;transcript_name=CHM13_chrY_T0000029;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000029:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	176559	180169	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=CHM13_chrY_T0000029;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000029;transcript_name=CHM13_chrY_T0000029;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000029:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	180170	180283	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=CHM13_chrY_T0000029;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000029;transcript_name=CHM13_chrY_T0000029;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000029:4;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	175392	180280	1000	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=CHM13_chrY_T0000030;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_G0000007;transcript_name=CHM13_chrY_T0000030;gene_name=PPP2R3B;ID=CHM13_chrY_T0000030;Name=PPP2R3B
CHM13_chrY	CAT	exon	175392	175567	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=CHM13_chrY_T0000030;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000030;transcript_name=CHM13_chrY_T0000030;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000030:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	175568	175933	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=CHM13_chrY_T0000030;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000030;transcript_name=CHM13_chrY_T0000030;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000030:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	175934	176023	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=CHM13_chrY_T0000030;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000030;transcript_name=CHM13_chrY_T0000030;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000030:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	176024	176509	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=CHM13_chrY_T0000030;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000030;transcript_name=CHM13_chrY_T0000030;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000030:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	176510	176864	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=CHM13_chrY_T0000030;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000030;transcript_name=CHM13_chrY_T0000030;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000030:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	176865	180169	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=CHM13_chrY_T0000030;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000030;transcript_name=CHM13_chrY_T0000030;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000030:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	180170	180280	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=CHM13_chrY_T0000030;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000030;transcript_name=CHM13_chrY_T0000030;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000030:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	176538	181168	1000	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=CHM13_chrY_T0000031;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_G0000007;transcript_name=CHM13_chrY_T0000031;gene_name=PPP2R3B;ID=CHM13_chrY_T0000031;Name=PPP2R3B
CHM13_chrY	CAT	exon	176538	176558	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=CHM13_chrY_T0000031;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000031;transcript_name=CHM13_chrY_T0000031;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000031:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	176559	180169	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=CHM13_chrY_T0000031;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000031;transcript_name=CHM13_chrY_T0000031;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000031:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	180170	180326	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=CHM13_chrY_T0000031;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000031;transcript_name=CHM13_chrY_T0000031;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000031:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	180327	180827	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=CHM13_chrY_T0000031;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000031;transcript_name=CHM13_chrY_T0000031;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000031:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	180828	181168	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=CHM13_chrY_T0000031;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000031;transcript_name=CHM13_chrY_T0000031;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000031:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	179550	224853	1000	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_G0000007;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=CHM13_chrY_T0000032;Name=PPP2R3B
CHM13_chrY	CAT	exon	179550	180326	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000032:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	180327	180827	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000032:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	180828	180914	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000032:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	180915	181354	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000032:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	181355	181429	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000032:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	181430	181887	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000032:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	181888	181990	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000032:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	181991	182243	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000032:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	182244	182347	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000032:4;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	182348	196336	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000032:4;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	196337	196522	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000032:5;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	196523	197186	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000032:5;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	197187	197264	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000032:6;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	197265	224265	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000032:6;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	224266	224853	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.9;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=CHM13_chrY_T0000032;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000032;transcript_name=CHM13_chrY_T0000032;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000032:7;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	181291	196448	1000	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=CHM13_chrY_T0000033;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_G0000007;transcript_name=CHM13_chrY_T0000033;gene_name=PPP2R3B;ID=CHM13_chrY_T0000033;Name=PPP2R3B
CHM13_chrY	CAT	exon	181291	181429	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=CHM13_chrY_T0000033;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000033;transcript_name=CHM13_chrY_T0000033;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000033:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	181430	181887	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=CHM13_chrY_T0000033;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000033;transcript_name=CHM13_chrY_T0000033;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000033:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	181888	181990	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=CHM13_chrY_T0000033;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000033;transcript_name=CHM13_chrY_T0000033;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000033:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	181991	182243	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=CHM13_chrY_T0000033;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000033;transcript_name=CHM13_chrY_T0000033;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000033:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	182244	182347	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=CHM13_chrY_T0000033;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000033;transcript_name=CHM13_chrY_T0000033;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000033:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	182348	196336	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=CHM13_chrY_T0000033;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000033;transcript_name=CHM13_chrY_T0000033;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000033:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	196337	196448	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.78200000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=CHM13_chrY_T0000033;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000033;transcript_name=CHM13_chrY_T0000033;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000033:3;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	181374	182492	1000	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=CHM13_chrY_T0000034;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_G0000007;transcript_name=CHM13_chrY_T0000034;gene_name=PPP2R3B;ID=CHM13_chrY_T0000034;Name=PPP2R3B
CHM13_chrY	CAT	exon	181374	181429	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=CHM13_chrY_T0000034;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000034;transcript_name=CHM13_chrY_T0000034;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000034:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	181430	181887	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=CHM13_chrY_T0000034;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000034;transcript_name=CHM13_chrY_T0000034;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000034:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	181888	181990	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=CHM13_chrY_T0000034;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000034;transcript_name=CHM13_chrY_T0000034;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000034:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	181991	182243	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=CHM13_chrY_T0000034;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000034;transcript_name=CHM13_chrY_T0000034;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000034:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	182244	182492	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=CHM13_chrY_T0000034;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000034;transcript_name=CHM13_chrY_T0000034;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000034:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	182265	211883	100	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=CHM13_chrY_T0000035;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_G0000007;transcript_name=CHM13_chrY_T0000035;gene_name=PPP2R3B;ID=CHM13_chrY_T0000035;Name=PPP2R3B
CHM13_chrY	CAT	exon	182265	182347	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=CHM13_chrY_T0000035;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000035;transcript_name=CHM13_chrY_T0000035;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000035:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	182265	182347	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=CHM13_chrY_T0000035;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000035;transcript_name=CHM13_chrY_T0000035;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000035:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	182348	196336	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=CHM13_chrY_T0000035;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000035;transcript_name=CHM13_chrY_T0000035;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000035:0;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	196337	196522	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=CHM13_chrY_T0000035;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000035;transcript_name=CHM13_chrY_T0000035;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000035:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	196337	196522	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=CHM13_chrY_T0000035;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000035;transcript_name=CHM13_chrY_T0000035;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000035:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	196523	211370	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=CHM13_chrY_T0000035;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000035;transcript_name=CHM13_chrY_T0000035;gene_name=PPP2R3B;ID=intron:CHM13_chrY_T0000035:1;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	211371	211883	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=CHM13_chrY_T0000035;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000035;transcript_name=CHM13_chrY_T0000035;gene_name=PPP2R3B;ID=exon:CHM13_chrY_T0000035:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	211371	211610	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=CHM13_chrY_T0000035;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000035;transcript_name=CHM13_chrY_T0000035;gene_name=PPP2R3B;ID=CDS:CHM13_chrY_T0000035:2;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	211608	211610	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=CHM13_chrY_T0000035;gene_id=CHM13_chrY_G0000007;Parent=CHM13_chrY_T0000035;transcript_name=CHM13_chrY_T0000035;gene_name=PPP2R3B;ID=start_codon:CHM13_chrY_T0000035;Name=PPP2R3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	224860	360774	.	+	.	source_gene_common_name=ENSG00000292349;source_gene=ENSG00000292349.2;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;gene_id=CHM13_chrY_G0000008;gene_biotype=lncRNA;gene_name=ENSG00000292349;gene_sources=liftoff;ID=CHM13_chrY_G0000008;Name=ENSG00000292349
CHM13_chrY	CAT	transcript	224860	259988	1000	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=299.527;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=CHM13_chrY_T0000036;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_G0000008;transcript_name=CHM13_chrY_T0000036;gene_name=ENSG00000292349;ID=CHM13_chrY_T0000036;Name=ENSG00000292349
CHM13_chrY	CAT	exon	224860	224970	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=299.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=CHM13_chrY_T0000036;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000036;transcript_name=CHM13_chrY_T0000036;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000036:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	224971	259676	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=299.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=CHM13_chrY_T0000036;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000036;transcript_name=CHM13_chrY_T0000036;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000036:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	259677	259988	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=299.527;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=CHM13_chrY_T0000036;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000036;transcript_name=CHM13_chrY_T0000036;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000036:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	224864	259983	1000	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.779;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=CHM13_chrY_T0000037;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_G0000008;transcript_name=CHM13_chrY_T0000037;gene_name=ENSG00000292349;ID=CHM13_chrY_T0000037;Name=ENSG00000292349
CHM13_chrY	CAT	exon	224864	224970	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=CHM13_chrY_T0000037;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000037;transcript_name=CHM13_chrY_T0000037;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000037:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	224971	256959	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=CHM13_chrY_T0000037;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000037;transcript_name=CHM13_chrY_T0000037;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000037:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	256960	257448	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=CHM13_chrY_T0000037;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000037;transcript_name=CHM13_chrY_T0000037;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000037:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	257449	259676	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=CHM13_chrY_T0000037;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000037;transcript_name=CHM13_chrY_T0000037;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000037:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	259677	259983	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=CHM13_chrY_T0000037;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000037;transcript_name=CHM13_chrY_T0000037;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000037:2;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	224878	244339	1000	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.926;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=CHM13_chrY_T0000038;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_G0000008;transcript_name=CHM13_chrY_T0000038;gene_name=ENSG00000292349;ID=CHM13_chrY_T0000038;Name=ENSG00000292349
CHM13_chrY	CAT	exon	224878	225188	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=CHM13_chrY_T0000038;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000038;transcript_name=CHM13_chrY_T0000038;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000038:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	225189	243294	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=CHM13_chrY_T0000038;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000038;transcript_name=CHM13_chrY_T0000038;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000038:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	243295	244339	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=CHM13_chrY_T0000038;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000038;transcript_name=CHM13_chrY_T0000038;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000038:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	224881	315299	1000	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=CHM13_chrY_T0000039;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_G0000008;transcript_name=CHM13_chrY_T0000039;gene_name=ENSG00000292349;ID=CHM13_chrY_T0000039;Name=ENSG00000292349
CHM13_chrY	CAT	exon	224881	225188	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=CHM13_chrY_T0000039;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000039;transcript_name=CHM13_chrY_T0000039;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000039:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	225189	302413	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=CHM13_chrY_T0000039;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000039;transcript_name=CHM13_chrY_T0000039;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000039:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	302414	303026	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=CHM13_chrY_T0000039;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000039;transcript_name=CHM13_chrY_T0000039;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000039:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	303027	312691	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=CHM13_chrY_T0000039;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000039;transcript_name=CHM13_chrY_T0000039;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000039:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	312692	312812	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=CHM13_chrY_T0000039;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000039;transcript_name=CHM13_chrY_T0000039;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000039:2;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	312813	313864	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=CHM13_chrY_T0000039;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000039;transcript_name=CHM13_chrY_T0000039;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000039:2;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	313865	314063	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=CHM13_chrY_T0000039;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000039;transcript_name=CHM13_chrY_T0000039;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000039:3;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	314064	314669	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=CHM13_chrY_T0000039;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000039;transcript_name=CHM13_chrY_T0000039;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000039:3;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	314670	315299	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=CHM13_chrY_T0000039;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000039;transcript_name=CHM13_chrY_T0000039;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000039:4;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	224933	360774	1000	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_G0000008;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=CHM13_chrY_T0000040;Name=ENSG00000292349
CHM13_chrY	CAT	exon	224933	225188	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000040:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	225189	277913	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000040:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	277914	278028	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000040:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	278029	279564	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000040:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	279565	279731	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000040:2;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	279732	302413	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000040:2;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	302414	303026	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000040:3;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	303027	332338	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000040:3;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	332339	332479	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000040:4;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	332480	338882	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000040:4;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	338883	338998	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000040:5;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	338999	344942	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000040:5;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	344943	345016	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000040:6;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	345017	359711	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000040:6;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	359712	360774	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=CHM13_chrY_T0000040;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000040;transcript_name=CHM13_chrY_T0000040;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000040:7;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	243580	256718	1000	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=CHM13_chrY_T0000042;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_G0000008;transcript_name=CHM13_chrY_T0000042;gene_name=ENSG00000292349;ID=CHM13_chrY_T0000042;Name=ENSG00000292349
CHM13_chrY	CAT	exon	243580	244212	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=CHM13_chrY_T0000042;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000042;transcript_name=CHM13_chrY_T0000042;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000042:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	244213	247107	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=CHM13_chrY_T0000042;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000042;transcript_name=CHM13_chrY_T0000042;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000042:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	247108	247354	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=CHM13_chrY_T0000042;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000042;transcript_name=CHM13_chrY_T0000042;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000042:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	247355	254316	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=CHM13_chrY_T0000042;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000042;transcript_name=CHM13_chrY_T0000042;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000042:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	254317	254605	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=CHM13_chrY_T0000042;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000042;transcript_name=CHM13_chrY_T0000042;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000042:2;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	254606	256344	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=CHM13_chrY_T0000042;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000042;transcript_name=CHM13_chrY_T0000042;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000042:2;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	256345	256718	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=299.935;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=CHM13_chrY_T0000042;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000042;transcript_name=CHM13_chrY_T0000042;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000042:3;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	243836	312989	1000	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=CHM13_chrY_T0000043;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_G0000008;transcript_name=CHM13_chrY_T0000043;gene_name=ENSG00000292349;ID=CHM13_chrY_T0000043;Name=ENSG00000292349
CHM13_chrY	CAT	exon	243836	244183	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=CHM13_chrY_T0000043;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000043;transcript_name=CHM13_chrY_T0000043;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000043:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	244184	302413	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=CHM13_chrY_T0000043;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000043;transcript_name=CHM13_chrY_T0000043;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000043:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	302414	303026	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=CHM13_chrY_T0000043;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000043;transcript_name=CHM13_chrY_T0000043;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000043:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	303027	312691	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=CHM13_chrY_T0000043;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000043;transcript_name=CHM13_chrY_T0000043;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000043:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	312692	312989	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=CHM13_chrY_T0000043;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000043;transcript_name=CHM13_chrY_T0000043;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000043:2;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	252662	254636	1000	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=299.086;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=CHM13_chrY_T0000044;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_G0000008;transcript_name=CHM13_chrY_T0000044;gene_name=ENSG00000292349;ID=CHM13_chrY_T0000044;Name=ENSG00000292349
CHM13_chrY	CAT	exon	252662	253107	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=299.086;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=CHM13_chrY_T0000044;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000044;transcript_name=CHM13_chrY_T0000044;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000044:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	253108	254316	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=299.086;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=CHM13_chrY_T0000044;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000044;transcript_name=CHM13_chrY_T0000044;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000044:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	254317	254636	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=299.086;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=CHM13_chrY_T0000044;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000044;transcript_name=CHM13_chrY_T0000044;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000044:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	254316	259988	1000	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=CHM13_chrY_T0000045;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_G0000008;transcript_name=CHM13_chrY_T0000045;gene_name=ENSG00000292349;ID=CHM13_chrY_T0000045;Name=ENSG00000292349
CHM13_chrY	CAT	exon	254316	254379	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=CHM13_chrY_T0000045;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000045;transcript_name=CHM13_chrY_T0000045;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000045:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	254380	256824	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=CHM13_chrY_T0000045;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000045;transcript_name=CHM13_chrY_T0000045;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000045:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	256825	257448	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=CHM13_chrY_T0000045;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000045;transcript_name=CHM13_chrY_T0000045;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000045:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	257449	259676	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=CHM13_chrY_T0000045;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000045;transcript_name=CHM13_chrY_T0000045;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000045:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	259677	259988	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=CHM13_chrY_T0000045;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000045;transcript_name=CHM13_chrY_T0000045;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000045:2;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	257184	259985	1000	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=299.61199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=CHM13_chrY_T0000046;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_G0000008;transcript_name=CHM13_chrY_T0000046;gene_name=ENSG00000292349;ID=CHM13_chrY_T0000046;Name=ENSG00000292349
CHM13_chrY	CAT	exon	257184	257389	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=299.61199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=CHM13_chrY_T0000046;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000046;transcript_name=CHM13_chrY_T0000046;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000046:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	257390	259676	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=299.61199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=CHM13_chrY_T0000046;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000046;transcript_name=CHM13_chrY_T0000046;gene_name=ENSG00000292349;ID=intron:CHM13_chrY_T0000046:0;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	259677	259985	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=299.61199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=CHM13_chrY_T0000046;gene_id=CHM13_chrY_G0000008;Parent=CHM13_chrY_T0000046;transcript_name=CHM13_chrY_T0000046;gene_name=ENSG00000292349;ID=exon:CHM13_chrY_T0000046:1;Name=ENSG00000292349;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	225998	226287	.	-	.	source_gene_common_name=Metazoa_SRP;source_gene=ENSG00000292350.1;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;gene_id=CHM13_chrY_G0000009;gene_biotype=misc_RNA;gene_name=Metazoa_SRP;gene_sources=liftoff;ID=CHM13_chrY_G0000009;Name=Metazoa_SRP
CHM13_chrY	CAT	transcript	225998	226287	1000	-	.	source_transcript=ENST00000711149.1;source_transcript_name=Metazoa_SRP.216-201;source_gene=ENSG00000292350.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000292350.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000711149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711149.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Metazoa_SRP;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;transcript_id=CHM13_chrY_T0000041;gene_id=CHM13_chrY_G0000009;Parent=CHM13_chrY_G0000009;transcript_name=CHM13_chrY_T0000041;gene_name=Metazoa_SRP;ID=CHM13_chrY_T0000041;Name=Metazoa_SRP
CHM13_chrY	CAT	exon	225998	226287	.	-	.	source_transcript=ENST00000711149.1;source_transcript_name=Metazoa_SRP.216-201;source_gene=ENSG00000292350.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000292350.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000711149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711149.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Metazoa_SRP;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;transcript_id=CHM13_chrY_T0000041;gene_id=CHM13_chrY_G0000009;Parent=CHM13_chrY_T0000041;transcript_name=CHM13_chrY_T0000041;gene_name=Metazoa_SRP;ID=exon:CHM13_chrY_T0000041:0;Name=Metazoa_SRP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	371660	371987	.	-	.	source_gene_common_name=FABP5P13;source_gene=ENSG00000292352.1;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;gene_id=CHM13_chrY_G0000010;gene_biotype=processed_pseudogene;gene_name=FABP5P13;gene_sources=liftoff;ID=CHM13_chrY_G0000010;Name=FABP5P13
CHM13_chrY	CAT	transcript	371660	371987	1000	-	.	source_transcript=ENST00000711147.1;source_transcript_name=FABP5P13-204;source_gene=ENSG00000292352.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292352.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711147.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711147.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FABP5P13;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;transcript_id=CHM13_chrY_T0000047;gene_id=CHM13_chrY_G0000010;Parent=CHM13_chrY_G0000010;transcript_name=CHM13_chrY_T0000047;gene_name=FABP5P13;ID=CHM13_chrY_T0000047;Name=FABP5P13
CHM13_chrY	CAT	exon	371660	371987	.	-	.	source_transcript=ENST00000711147.1;source_transcript_name=FABP5P13-204;source_gene=ENSG00000292352.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292352.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711147.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711147.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FABP5P13;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;transcript_id=CHM13_chrY_T0000047;gene_id=CHM13_chrY_G0000010;Parent=CHM13_chrY_T0000047;transcript_name=CHM13_chrY_T0000047;gene_name=FABP5P13;ID=exon:CHM13_chrY_T0000047:0;Name=FABP5P13;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	397886	398002	.	-	.	source_gene_common_name=KRT18P53;source_gene=ENSG00000292353.1;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;gene_id=CHM13_chrY_G0000011;gene_biotype=processed_pseudogene;gene_name=KRT18P53;gene_sources=liftoff;ID=CHM13_chrY_G0000011;Name=KRT18P53
CHM13_chrY	CAT	transcript	397886	398002	1000	-	.	source_transcript=ENST00000711146.1;source_transcript_name=KRT18P53-204;source_gene=ENSG00000292353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711146.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711146.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P53;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;transcript_id=CHM13_chrY_T0000048;gene_id=CHM13_chrY_G0000011;Parent=CHM13_chrY_G0000011;transcript_name=CHM13_chrY_T0000048;gene_name=KRT18P53;ID=CHM13_chrY_T0000048;Name=KRT18P53
CHM13_chrY	CAT	exon	397886	398002	.	-	.	source_transcript=ENST00000711146.1;source_transcript_name=KRT18P53-204;source_gene=ENSG00000292353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711146.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711146.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P53;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;transcript_id=CHM13_chrY_T0000048;gene_id=CHM13_chrY_G0000011;Parent=CHM13_chrY_T0000048;transcript_name=CHM13_chrY_T0000048;gene_name=KRT18P53;ID=exon:CHM13_chrY_T0000048:0;Name=KRT18P53;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	454310	455122	.	+	.	source_gene_common_name=ENSG00000310543;source_gene=ENSG00000310543.1;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;gene_id=CHM13_chrY_G0000012;gene_biotype=lncRNA;gene_name=ENSG00000310543;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000012;Name=ENSG00000310543
CHM13_chrY	CAT	transcript	454310	455122	1000	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=CHM13_chrY_T0000049;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_G0000012;transcript_name=CHM13_chrY_T0000049;gene_name=ENSG00000310543;ID=CHM13_chrY_T0000049;Name=ENSG00000310543
CHM13_chrY	CAT	exon	454310	454705	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=CHM13_chrY_T0000049;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_T0000049;transcript_name=CHM13_chrY_T0000049;gene_name=ENSG00000310543;ID=exon:CHM13_chrY_T0000049:0;Name=ENSG00000310543;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	454706	454881	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=CHM13_chrY_T0000049;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_T0000049;transcript_name=CHM13_chrY_T0000049;gene_name=ENSG00000310543;ID=intron:CHM13_chrY_T0000049:0;Name=ENSG00000310543;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	454882	455122	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=CHM13_chrY_T0000049;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_T0000049;transcript_name=CHM13_chrY_T0000049;gene_name=ENSG00000310543;ID=exon:CHM13_chrY_T0000049:1;Name=ENSG00000310543;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	454400	455122	1000	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850703.1;transcript_id=CHM13_chrY_T0000050;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_G0000012;transcript_name=CHM13_chrY_T0000050;gene_name=ENSG00000310543;ID=CHM13_chrY_T0000050;Name=ENSG00000310543
CHM13_chrY	CAT	exon	454400	455122	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850703.1;transcript_id=CHM13_chrY_T0000050;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_T0000050;transcript_name=CHM13_chrY_T0000050;gene_name=ENSG00000310543;ID=exon:CHM13_chrY_T0000050:0;Name=ENSG00000310543;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	454400	455122	1000	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=CHM13_chrY_T0000051;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_G0000012;transcript_name=CHM13_chrY_T0000051;gene_name=ENSG00000310543;ID=CHM13_chrY_T0000051;Name=ENSG00000310543
CHM13_chrY	CAT	exon	454400	454705	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=CHM13_chrY_T0000051;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_T0000051;transcript_name=CHM13_chrY_T0000051;gene_name=ENSG00000310543;ID=exon:CHM13_chrY_T0000051:0;Name=ENSG00000310543;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	454706	454778	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=CHM13_chrY_T0000051;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_T0000051;transcript_name=CHM13_chrY_T0000051;gene_name=ENSG00000310543;ID=intron:CHM13_chrY_T0000051:0;Name=ENSG00000310543;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	454779	455122	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=CHM13_chrY_T0000051;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_T0000051;transcript_name=CHM13_chrY_T0000051;gene_name=ENSG00000310543;ID=exon:CHM13_chrY_T0000051:1;Name=ENSG00000310543;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	454422	455122	1000	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=CHM13_chrY_T0000052;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_G0000012;transcript_name=CHM13_chrY_T0000052;gene_name=ENSG00000310543;ID=CHM13_chrY_T0000052;Name=ENSG00000310543
CHM13_chrY	CAT	exon	454422	454705	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=CHM13_chrY_T0000052;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_T0000052;transcript_name=CHM13_chrY_T0000052;gene_name=ENSG00000310543;ID=exon:CHM13_chrY_T0000052:0;Name=ENSG00000310543;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	454706	454839	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=CHM13_chrY_T0000052;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_T0000052;transcript_name=CHM13_chrY_T0000052;gene_name=ENSG00000310543;ID=intron:CHM13_chrY_T0000052:0;Name=ENSG00000310543;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	454840	455122	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=CHM13_chrY_T0000052;gene_id=CHM13_chrY_G0000012;Parent=CHM13_chrY_T0000052;transcript_name=CHM13_chrY_T0000052;gene_name=ENSG00000310543;ID=exon:CHM13_chrY_T0000052:1;Name=ENSG00000310543;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	478002	512484	.	+	.	source_gene_common_name=SHOX;source_gene=ENSG00000292354.1;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;gene_id=CHM13_chrY_G0000013;gene_biotype=protein_coding;gene_name=SHOX;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000013;Name=SHOX
CHM13_chrY	CAT	transcript	478002	512484	100	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_G0000013;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=CHM13_chrY_T0000053;Name=SHOX
CHM13_chrY	CAT	exon	478002	478262	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=exon:CHM13_chrY_T0000053:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	478263	483767	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=intron:CHM13_chrY_T0000053:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	483768	484476	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=exon:CHM13_chrY_T0000053:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	484200	484476	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000053:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	484200	484202	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=start_codon:CHM13_chrY_T0000053;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	484477	487919	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=intron:CHM13_chrY_T0000053:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	487920	488128	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=exon:CHM13_chrY_T0000053:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	487920	488128	.	+	2	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000053:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	488129	493953	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=intron:CHM13_chrY_T0000053:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	493954	494011	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=exon:CHM13_chrY_T0000053:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	493954	494011	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000053:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	494012	494131	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=intron:CHM13_chrY_T0000053:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	494132	494220	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=exon:CHM13_chrY_T0000053:4;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	494132	494220	.	+	2	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000053:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	494221	511858	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=intron:CHM13_chrY_T0000053:4;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	511859	512484	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=exon:CHM13_chrY_T0000053:5;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	511859	511903	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000053:4;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	511901	511903	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=CHM13_chrY_T0000053;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000053;transcript_name=CHM13_chrY_T0000053;gene_name=SHOX;ID=stop_codon:CHM13_chrY_T0000053;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	478002	499888	100	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_G0000013;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=CHM13_chrY_T0000054;Name=SHOX
CHM13_chrY	CAT	exon	478002	478262	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=exon:CHM13_chrY_T0000054:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	478263	483767	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=intron:CHM13_chrY_T0000054:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	483768	484476	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=exon:CHM13_chrY_T0000054:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	484200	484476	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000054:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	484200	484202	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=start_codon:CHM13_chrY_T0000054;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	484477	487919	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=intron:CHM13_chrY_T0000054:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	487920	488128	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=exon:CHM13_chrY_T0000054:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	487920	488128	.	+	2	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000054:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	488129	493953	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=intron:CHM13_chrY_T0000054:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	493954	494011	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=exon:CHM13_chrY_T0000054:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	493954	494011	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000054:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	494012	494131	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=intron:CHM13_chrY_T0000054:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	494132	494220	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=exon:CHM13_chrY_T0000054:4;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	494132	494220	.	+	2	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000054:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	494221	497467	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=intron:CHM13_chrY_T0000054:4;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	497468	499888	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=exon:CHM13_chrY_T0000054:5;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	497468	497713	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000054:4;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	497711	497713	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=CHM13_chrY_T0000054;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000054;transcript_name=CHM13_chrY_T0000054;gene_name=SHOX;ID=stop_codon:CHM13_chrY_T0000054;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	484093	504590	9940	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_G0000013;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=CHM13_chrY_T0000055;Name=SHOX
CHM13_chrY	CAT	exon	484093	484476	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=exon:CHM13_chrY_T0000055:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	484200	484476	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000055:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	484200	484202	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=start_codon:CHM13_chrY_T0000055;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	484477	487919	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=intron:CHM13_chrY_T0000055:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	487920	488128	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=exon:CHM13_chrY_T0000055:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	487920	488128	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000055:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	488129	493953	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=intron:CHM13_chrY_T0000055:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	493954	494011	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=exon:CHM13_chrY_T0000055:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	493954	494011	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000055:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	494012	494131	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=intron:CHM13_chrY_T0000055:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	494132	494220	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=exon:CHM13_chrY_T0000055:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	494132	494220	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000055:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	494221	497467	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=intron:CHM13_chrY_T0000055:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	497468	500822	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=exon:CHM13_chrY_T0000055:4;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	497468	497713	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000055:4;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	497711	497713	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=stop_codon:CHM13_chrY_T0000055;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	500823	500904	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=intron:CHM13_chrY_T0000055:4;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	500905	504590	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;transcript_id=CHM13_chrY_T0000055;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000055;transcript_name=CHM13_chrY_T0000055;gene_name=SHOX;ID=exon:CHM13_chrY_T0000055:5;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	484093	504590	100	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_G0000013;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=CHM13_chrY_T0000056;Name=SHOX
CHM13_chrY	CAT	exon	484093	484476	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=exon:CHM13_chrY_T0000056:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	484200	484476	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000056:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	484200	484202	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=start_codon:CHM13_chrY_T0000056;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	484477	487919	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=intron:CHM13_chrY_T0000056:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	487920	488128	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=exon:CHM13_chrY_T0000056:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	487920	488128	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000056:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	488129	493953	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=intron:CHM13_chrY_T0000056:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	493954	494011	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=exon:CHM13_chrY_T0000056:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	493954	494011	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000056:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	494012	494131	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=intron:CHM13_chrY_T0000056:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	494132	494220	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=exon:CHM13_chrY_T0000056:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	494132	494220	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000056:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	494221	497467	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=intron:CHM13_chrY_T0000056:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	497468	504590	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=exon:CHM13_chrY_T0000056:4;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	497468	497713	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000056:4;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	497711	497713	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1;transcript_id=CHM13_chrY_T0000056;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000056;transcript_name=CHM13_chrY_T0000056;gene_name=SHOX;ID=stop_codon:CHM13_chrY_T0000056;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	484109	512484	100	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_G0000013;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=CHM13_chrY_T0000057;Name=SHOX
CHM13_chrY	CAT	exon	484109	484476	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=exon:CHM13_chrY_T0000057:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	484200	484476	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000057:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	484200	484202	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=start_codon:CHM13_chrY_T0000057;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	484477	487919	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=intron:CHM13_chrY_T0000057:0;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	487920	488128	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=exon:CHM13_chrY_T0000057:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	487920	488128	.	+	2	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000057:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	488129	493953	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=intron:CHM13_chrY_T0000057:1;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	493954	494011	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=exon:CHM13_chrY_T0000057:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	493954	494011	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000057:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	494012	494131	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=intron:CHM13_chrY_T0000057:2;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	494132	494220	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=exon:CHM13_chrY_T0000057:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	494132	494220	.	+	2	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000057:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	494221	511858	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=intron:CHM13_chrY_T0000057:3;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	511859	512484	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=exon:CHM13_chrY_T0000057:4;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	511859	511903	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=CDS:CHM13_chrY_T0000057:4;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	511901	511903	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=CHM13_chrY_T0000057;gene_id=CHM13_chrY_G0000013;Parent=CHM13_chrY_T0000057;transcript_name=CHM13_chrY_T0000057;gene_name=SHOX;ID=stop_codon:CHM13_chrY_T0000057;Name=SHOX;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	818664	819607	.	-	.	source_gene_common_name=ENSG00000310541;source_gene=ENSG00000310541.1;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;gene_id=CHM13_chrY_G0000014;gene_biotype=lncRNA;gene_name=ENSG00000310541;gene_sources=liftoff;ID=CHM13_chrY_G0000014;Name=ENSG00000310541
CHM13_chrY	CAT	transcript	818664	819607	1000	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=298.35699999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=CHM13_chrY_T0000058;gene_id=CHM13_chrY_G0000014;Parent=CHM13_chrY_G0000014;transcript_name=CHM13_chrY_T0000058;gene_name=ENSG00000310541;ID=CHM13_chrY_T0000058;Name=ENSG00000310541
CHM13_chrY	CAT	exon	818664	818992	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=298.35699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=CHM13_chrY_T0000058;gene_id=CHM13_chrY_G0000014;Parent=CHM13_chrY_T0000058;transcript_name=CHM13_chrY_T0000058;gene_name=ENSG00000310541;ID=exon:CHM13_chrY_T0000058:0;Name=ENSG00000310541;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	818993	819510	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=298.35699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=CHM13_chrY_T0000058;gene_id=CHM13_chrY_G0000014;Parent=CHM13_chrY_T0000058;transcript_name=CHM13_chrY_T0000058;gene_name=ENSG00000310541;ID=intron:CHM13_chrY_T0000058:0;Name=ENSG00000310541;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	819511	819607	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=298.35699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=CHM13_chrY_T0000058;gene_id=CHM13_chrY_G0000014;Parent=CHM13_chrY_T0000058;transcript_name=CHM13_chrY_T0000058;gene_name=ENSG00000310541;ID=exon:CHM13_chrY_T0000058:1;Name=ENSG00000310541;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	844547	848747	.	+	.	source_gene_common_name=ENSG00000292335;source_gene=ENSG00000292335.2;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;gene_id=CHM13_chrY_G0000015;gene_biotype=lncRNA;gene_name=ENSG00000292335;gene_sources=liftoff;ID=CHM13_chrY_G0000015;Name=ENSG00000292335
CHM13_chrY	CAT	transcript	844547	848739	1000	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.486;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=CHM13_chrY_T0000059;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_G0000015;transcript_name=CHM13_chrY_T0000059;gene_name=ENSG00000292335;ID=CHM13_chrY_T0000059;Name=ENSG00000292335
CHM13_chrY	CAT	exon	844547	844878	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=CHM13_chrY_T0000059;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000059;transcript_name=CHM13_chrY_T0000059;gene_name=ENSG00000292335;ID=exon:CHM13_chrY_T0000059:0;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	844879	847738	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=CHM13_chrY_T0000059;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000059;transcript_name=CHM13_chrY_T0000059;gene_name=ENSG00000292335;ID=intron:CHM13_chrY_T0000059:0;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	847739	847802	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=CHM13_chrY_T0000059;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000059;transcript_name=CHM13_chrY_T0000059;gene_name=ENSG00000292335;ID=exon:CHM13_chrY_T0000059:1;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	847803	848357	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=CHM13_chrY_T0000059;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000059;transcript_name=CHM13_chrY_T0000059;gene_name=ENSG00000292335;ID=intron:CHM13_chrY_T0000059:1;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	848358	848739	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=CHM13_chrY_T0000059;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000059;transcript_name=CHM13_chrY_T0000059;gene_name=ENSG00000292335;ID=exon:CHM13_chrY_T0000059:2;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	844592	848739	1000	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.552;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=CHM13_chrY_T0000060;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_G0000015;transcript_name=CHM13_chrY_T0000060;gene_name=ENSG00000292335;ID=CHM13_chrY_T0000060;Name=ENSG00000292335
CHM13_chrY	CAT	exon	844592	844878	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=CHM13_chrY_T0000060;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000060;transcript_name=CHM13_chrY_T0000060;gene_name=ENSG00000292335;ID=exon:CHM13_chrY_T0000060:0;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	844879	848357	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=CHM13_chrY_T0000060;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000060;transcript_name=CHM13_chrY_T0000060;gene_name=ENSG00000292335;ID=intron:CHM13_chrY_T0000060:0;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	848358	848739	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.552;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=CHM13_chrY_T0000060;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000060;transcript_name=CHM13_chrY_T0000060;gene_name=ENSG00000292335;ID=exon:CHM13_chrY_T0000060:1;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	844627	848739	1000	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.567;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=CHM13_chrY_T0000061;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_G0000015;transcript_name=CHM13_chrY_T0000061;gene_name=ENSG00000292335;ID=CHM13_chrY_T0000061;Name=ENSG00000292335
CHM13_chrY	CAT	exon	844627	844873	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.567;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=CHM13_chrY_T0000061;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000061;transcript_name=CHM13_chrY_T0000061;gene_name=ENSG00000292335;ID=exon:CHM13_chrY_T0000061:0;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	844874	847738	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.567;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=CHM13_chrY_T0000061;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000061;transcript_name=CHM13_chrY_T0000061;gene_name=ENSG00000292335;ID=intron:CHM13_chrY_T0000061:0;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	847739	847802	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.567;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=CHM13_chrY_T0000061;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000061;transcript_name=CHM13_chrY_T0000061;gene_name=ENSG00000292335;ID=exon:CHM13_chrY_T0000061:1;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	847803	848357	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.567;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=CHM13_chrY_T0000061;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000061;transcript_name=CHM13_chrY_T0000061;gene_name=ENSG00000292335;ID=intron:CHM13_chrY_T0000061:1;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	848358	848739	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.567;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=CHM13_chrY_T0000061;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000061;transcript_name=CHM13_chrY_T0000061;gene_name=ENSG00000292335;ID=exon:CHM13_chrY_T0000061:2;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	844642	848747	1000	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.51800000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=CHM13_chrY_T0000062;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_G0000015;transcript_name=CHM13_chrY_T0000062;gene_name=ENSG00000292335;ID=CHM13_chrY_T0000062;Name=ENSG00000292335
CHM13_chrY	CAT	exon	844642	844873	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.51800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=CHM13_chrY_T0000062;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000062;transcript_name=CHM13_chrY_T0000062;gene_name=ENSG00000292335;ID=exon:CHM13_chrY_T0000062:0;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	844874	848357	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.51800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=CHM13_chrY_T0000062;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000062;transcript_name=CHM13_chrY_T0000062;gene_name=ENSG00000292335;ID=intron:CHM13_chrY_T0000062:0;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	848358	848747	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.51800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=CHM13_chrY_T0000062;gene_id=CHM13_chrY_G0000015;Parent=CHM13_chrY_T0000062;transcript_name=CHM13_chrY_T0000062;gene_name=ENSG00000292335;ID=exon:CHM13_chrY_T0000062:1;Name=ENSG00000292335;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	862852	864450	.	-	.	source_gene_common_name=RPL14P5;source_gene=ENSG00000292328.1;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;gene_id=CHM13_chrY_G0000016;gene_biotype=processed_pseudogene;gene_name=RPL14P5;gene_sources=liftoff;ID=CHM13_chrY_G0000016;Name=RPL14P5
CHM13_chrY	CAT	transcript	862852	864450	1000	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=CHM13_chrY_T0000063;gene_id=CHM13_chrY_G0000016;Parent=CHM13_chrY_G0000016;transcript_name=CHM13_chrY_T0000063;gene_name=RPL14P5;ID=CHM13_chrY_T0000063;Name=RPL14P5
CHM13_chrY	CAT	exon	862852	862900	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=CHM13_chrY_T0000063;gene_id=CHM13_chrY_G0000016;Parent=CHM13_chrY_T0000063;transcript_name=CHM13_chrY_T0000063;gene_name=RPL14P5;ID=exon:CHM13_chrY_T0000063:0;Name=RPL14P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	862901	863440	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=CHM13_chrY_T0000063;gene_id=CHM13_chrY_G0000016;Parent=CHM13_chrY_T0000063;transcript_name=CHM13_chrY_T0000063;gene_name=RPL14P5;ID=intron:CHM13_chrY_T0000063:0;Name=RPL14P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	863441	863729	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=CHM13_chrY_T0000063;gene_id=CHM13_chrY_G0000016;Parent=CHM13_chrY_T0000063;transcript_name=CHM13_chrY_T0000063;gene_name=RPL14P5;ID=exon:CHM13_chrY_T0000063:1;Name=RPL14P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	863730	864058	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=CHM13_chrY_T0000063;gene_id=CHM13_chrY_G0000016;Parent=CHM13_chrY_T0000063;transcript_name=CHM13_chrY_T0000063;gene_name=RPL14P5;ID=intron:CHM13_chrY_T0000063:1;Name=RPL14P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	864059	864450	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=CHM13_chrY_T0000063;gene_id=CHM13_chrY_G0000016;Parent=CHM13_chrY_T0000063;transcript_name=CHM13_chrY_T0000063;gene_name=RPL14P5;ID=exon:CHM13_chrY_T0000063:2;Name=RPL14P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	968986	969969	.	+	.	source_gene_common_name=ENSG00000310548;source_gene=ENSG00000310548.1;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;gene_id=CHM13_chrY_G0000017;gene_biotype=lncRNA;gene_name=ENSG00000310548;gene_sources=liftoff;ID=CHM13_chrY_G0000017;Name=ENSG00000310548
CHM13_chrY	CAT	transcript	968986	969969	1000	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.76300000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=CHM13_chrY_T0000064;gene_id=CHM13_chrY_G0000017;Parent=CHM13_chrY_G0000017;transcript_name=CHM13_chrY_T0000064;gene_name=ENSG00000310548;ID=CHM13_chrY_T0000064;Name=ENSG00000310548
CHM13_chrY	CAT	exon	968986	969111	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.76300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=CHM13_chrY_T0000064;gene_id=CHM13_chrY_G0000017;Parent=CHM13_chrY_T0000064;transcript_name=CHM13_chrY_T0000064;gene_name=ENSG00000310548;ID=exon:CHM13_chrY_T0000064:0;Name=ENSG00000310548;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	969112	969245	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.76300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=CHM13_chrY_T0000064;gene_id=CHM13_chrY_G0000017;Parent=CHM13_chrY_T0000064;transcript_name=CHM13_chrY_T0000064;gene_name=ENSG00000310548;ID=intron:CHM13_chrY_T0000064:0;Name=ENSG00000310548;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	969246	969969	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=299.76300000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=CHM13_chrY_T0000064;gene_id=CHM13_chrY_G0000017;Parent=CHM13_chrY_T0000064;transcript_name=CHM13_chrY_T0000064;gene_name=ENSG00000310548;ID=exon:CHM13_chrY_T0000064:1;Name=ENSG00000310548;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1029790	1039462	.	+	.	source_gene_common_name=ENSG00000310556;source_gene=ENSG00000310556.1;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;gene_id=CHM13_chrY_G0000018;gene_biotype=lncRNA;gene_name=ENSG00000310556;gene_sources=liftoff;ID=CHM13_chrY_G0000018;Name=ENSG00000310556
CHM13_chrY	CAT	transcript	1029790	1034117	1000	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.616;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=CHM13_chrY_T0000065;gene_id=CHM13_chrY_G0000018;Parent=CHM13_chrY_G0000018;transcript_name=CHM13_chrY_T0000065;gene_name=ENSG00000310556;ID=CHM13_chrY_T0000065;Name=ENSG00000310556
CHM13_chrY	CAT	exon	1029790	1029876	.	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.616;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=CHM13_chrY_T0000065;gene_id=CHM13_chrY_G0000018;Parent=CHM13_chrY_T0000065;transcript_name=CHM13_chrY_T0000065;gene_name=ENSG00000310556;ID=exon:CHM13_chrY_T0000065:0;Name=ENSG00000310556;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1029877	1033161	.	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.616;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=CHM13_chrY_T0000065;gene_id=CHM13_chrY_G0000018;Parent=CHM13_chrY_T0000065;transcript_name=CHM13_chrY_T0000065;gene_name=ENSG00000310556;ID=intron:CHM13_chrY_T0000065:0;Name=ENSG00000310556;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1033162	1034117	.	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.616;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=CHM13_chrY_T0000065;gene_id=CHM13_chrY_G0000018;Parent=CHM13_chrY_T0000065;transcript_name=CHM13_chrY_T0000065;gene_name=ENSG00000310556;ID=exon:CHM13_chrY_T0000065:1;Name=ENSG00000310556;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1029818	1039462	1000	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=CHM13_chrY_T0000066;gene_id=CHM13_chrY_G0000018;Parent=CHM13_chrY_G0000018;transcript_name=CHM13_chrY_T0000066;gene_name=ENSG00000310556;ID=CHM13_chrY_T0000066;Name=ENSG00000310556
CHM13_chrY	CAT	exon	1029818	1029876	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=CHM13_chrY_T0000066;gene_id=CHM13_chrY_G0000018;Parent=CHM13_chrY_T0000066;transcript_name=CHM13_chrY_T0000066;gene_name=ENSG00000310556;ID=exon:CHM13_chrY_T0000066:0;Name=ENSG00000310556;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1029877	1033161	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=CHM13_chrY_T0000066;gene_id=CHM13_chrY_G0000018;Parent=CHM13_chrY_T0000066;transcript_name=CHM13_chrY_T0000066;gene_name=ENSG00000310556;ID=intron:CHM13_chrY_T0000066:0;Name=ENSG00000310556;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1033162	1033497	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=CHM13_chrY_T0000066;gene_id=CHM13_chrY_G0000018;Parent=CHM13_chrY_T0000066;transcript_name=CHM13_chrY_T0000066;gene_name=ENSG00000310556;ID=exon:CHM13_chrY_T0000066:1;Name=ENSG00000310556;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1033498	1039199	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=CHM13_chrY_T0000066;gene_id=CHM13_chrY_G0000018;Parent=CHM13_chrY_T0000066;transcript_name=CHM13_chrY_T0000066;gene_name=ENSG00000310556;ID=intron:CHM13_chrY_T0000066:1;Name=ENSG00000310556;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1039200	1039462	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=CHM13_chrY_T0000066;gene_id=CHM13_chrY_G0000018;Parent=CHM13_chrY_T0000066;transcript_name=CHM13_chrY_T0000066;gene_name=ENSG00000310556;ID=exon:CHM13_chrY_T0000066:2;Name=ENSG00000310556;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1050430	1072751	.	-	.	source_gene_common_name=CRLF2;source_gene=ENSG00000292363.1;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;gene_id=CHM13_chrY_G0000019;gene_biotype=protein_coding;gene_name=CRLF2;gene_sources=liftoff;ID=CHM13_chrY_G0000019;Name=CRLF2
CHM13_chrY	CAT	transcript	1050430	1072677	100	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_G0000019;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=CHM13_chrY_T0000067;Name=CRLF2
CHM13_chrY	CAT	exon	1050430	1051100	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000067:0;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1050837	1051100	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000067:0;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1050837	1050839	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=stop_codon:CHM13_chrY_T0000067;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1051101	1053169	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000067:0;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1053170	1053254	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000067:1;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1053170	1053254	.	-	1	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000067:1;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1053255	1056733	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000067:1;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1056734	1056854	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000067:2;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1056734	1056854	.	-	2	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000067:2;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1056855	1058550	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000067:2;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1058551	1058713	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000067:3;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1058551	1058713	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000067:3;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1058714	1062399	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000067:3;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1062400	1062533	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000067:4;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1062400	1062533	.	-	2	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000067:4;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1062534	1066455	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000067:4;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1066456	1066622	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000067:5;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1066456	1066622	.	-	1	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000067:5;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1066623	1068825	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000067:5;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1068826	1068928	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000067:6;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1068826	1068928	.	-	2	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000067:6;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1068929	1072583	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000067:6;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1072584	1072677	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000067:7;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1072584	1072662	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000067:7;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1072660	1072662	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=CHM13_chrY_T0000067;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000067;transcript_name=CHM13_chrY_T0000067;gene_name=CRLF2;ID=start_codon:CHM13_chrY_T0000067;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1050432	1072751	1000	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_G0000019;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=CHM13_chrY_T0000068;Name=CRLF2
CHM13_chrY	CAT	exon	1050432	1051100	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000068:0;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1051101	1053169	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000068:0;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1053170	1053254	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000068:1;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1053255	1056733	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000068:1;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1056734	1056854	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000068:2;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1056855	1058791	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000068:2;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1058792	1059136	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000068:3;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1058918	1059136	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000068:0;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1058918	1058920	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=stop_codon:CHM13_chrY_T0000068;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1059137	1062399	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000068:3;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1062400	1062533	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000068:4;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1062400	1062533	.	-	2	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000068:1;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1062534	1066455	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000068:4;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1066456	1066622	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000068:5;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1066456	1066622	.	-	1	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000068:2;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1066623	1068825	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000068:5;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1068826	1068925	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000068:6;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1068826	1068925	.	-	2	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000068:3;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1068926	1072583	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000068:6;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1072584	1072751	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000068:7;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1072584	1072662	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000068:4;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1072660	1072662	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.721;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=CHM13_chrY_T0000068;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000068;transcript_name=CHM13_chrY_T0000068;gene_name=CRLF2;ID=start_codon:CHM13_chrY_T0000068;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1050837	1072662	100	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_G0000019;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=CHM13_chrY_T0000069;Name=CRLF2
CHM13_chrY	CAT	exon	1050837	1051100	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000069:0;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1050837	1051100	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000069:0;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1050837	1050839	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=stop_codon:CHM13_chrY_T0000069;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1051101	1053169	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000069:0;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1053170	1053254	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000069:1;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1053170	1053254	.	-	1	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000069:1;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1053255	1056733	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000069:1;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1056734	1056854	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000069:2;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1056734	1056854	.	-	2	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000069:2;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1056855	1058550	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000069:2;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1058551	1058713	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000069:3;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1058551	1058713	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000069:3;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1058714	1062399	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000069:3;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1062400	1062533	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000069:4;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1062400	1062533	.	-	2	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000069:4;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1062534	1066455	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000069:4;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1066456	1066622	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000069:5;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1066456	1066468	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=CDS:CHM13_chrY_T0000069:5;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1066466	1066468	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=start_codon:CHM13_chrY_T0000069;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1066623	1072583	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=intron:CHM13_chrY_T0000069:5;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1072584	1072662	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=CHM13_chrY_T0000069;gene_id=CHM13_chrY_G0000019;Parent=CHM13_chrY_T0000069;transcript_name=CHM13_chrY_T0000069;gene_name=CRLF2;ID=exon:CHM13_chrY_T0000069:6;Name=CRLF2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1108660	1109662	.	-	.	source_gene_common_name=ENSG00000310545;source_gene=ENSG00000310545.1;alternative_source_transcripts=ENST00000850707.1,ENST00000850707.1;gene_id=CHM13_chrY_G0000020;gene_biotype=lncRNA;gene_name=ENSG00000310545;gene_sources=liftoff;ID=CHM13_chrY_G0000020;Name=ENSG00000310545
CHM13_chrY	CAT	transcript	1108660	1109662	1000	-	.	source_transcript=ENST00000850707.1;source_transcript_name=ENST00000850707;source_gene=ENSG00000310545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850707.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310545;alternative_source_transcripts=ENST00000850707.1,ENST00000850707.1;transcript_id=CHM13_chrY_T0000070;gene_id=CHM13_chrY_G0000020;Parent=CHM13_chrY_G0000020;transcript_name=CHM13_chrY_T0000070;gene_name=ENSG00000310545;ID=CHM13_chrY_T0000070;Name=ENSG00000310545
CHM13_chrY	CAT	exon	1108660	1109662	.	-	.	source_transcript=ENST00000850707.1;source_transcript_name=ENST00000850707;source_gene=ENSG00000310545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850707.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310545;alternative_source_transcripts=ENST00000850707.1,ENST00000850707.1;transcript_id=CHM13_chrY_T0000070;gene_id=CHM13_chrY_G0000020;Parent=CHM13_chrY_T0000070;transcript_name=CHM13_chrY_T0000070;gene_name=ENSG00000310545;ID=exon:CHM13_chrY_T0000070:0;Name=ENSG00000310545;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1108682	1124202	.	+	.	source_gene_common_name=ENSG00000310544;source_gene=ENSG00000310544.1;gene_id=CHM13_chrY_G0000021;gene_biotype=lncRNA;gene_name=ENSG00000310544;gene_sources=liftoff,transMap,transMap_pairwise;ID=CHM13_chrY_G0000021;Name=ENSG00000310544
CHM13_chrY	CAT	transcript	1108682	1124202	1000	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000071;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_G0000021;transcript_name=CHM13_chrY_T0000071;gene_name=ENSG00000310544;ID=CHM13_chrY_T0000071;Name=ENSG00000310544
CHM13_chrY	CAT	exon	1108682	1109616	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000071;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000071;transcript_name=CHM13_chrY_T0000071;gene_name=ENSG00000310544;ID=exon:CHM13_chrY_T0000071:0;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1109617	1122690	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000071;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000071;transcript_name=CHM13_chrY_T0000071;gene_name=ENSG00000310544;ID=intron:CHM13_chrY_T0000071:0;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1122691	1122761	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000071;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000071;transcript_name=CHM13_chrY_T0000071;gene_name=ENSG00000310544;ID=exon:CHM13_chrY_T0000071:1;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1122762	1123359	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000071;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000071;transcript_name=CHM13_chrY_T0000071;gene_name=ENSG00000310544;ID=intron:CHM13_chrY_T0000071:1;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1123360	1124202	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000071;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000071;transcript_name=CHM13_chrY_T0000071;gene_name=ENSG00000310544;ID=exon:CHM13_chrY_T0000071:2;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1108682	1124202	1000	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000072;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_G0000021;transcript_name=CHM13_chrY_T0000072;gene_name=ENSG00000310544;ID=CHM13_chrY_T0000072;Name=ENSG00000310544
CHM13_chrY	CAT	exon	1108682	1109616	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000072;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000072;transcript_name=CHM13_chrY_T0000072;gene_name=ENSG00000310544;ID=exon:CHM13_chrY_T0000072:0;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1109617	1122690	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000072;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000072;transcript_name=CHM13_chrY_T0000072;gene_name=ENSG00000310544;ID=intron:CHM13_chrY_T0000072:0;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1122691	1122737	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000072;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000072;transcript_name=CHM13_chrY_T0000072;gene_name=ENSG00000310544;ID=exon:CHM13_chrY_T0000072:1;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1122738	1123335	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000072;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000072;transcript_name=CHM13_chrY_T0000072;gene_name=ENSG00000310544;ID=intron:CHM13_chrY_T0000072:1;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1123336	1124202	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000072;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000072;transcript_name=CHM13_chrY_T0000072;gene_name=ENSG00000310544;ID=exon:CHM13_chrY_T0000072:2;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1108682	1124202	1000	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000073;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_G0000021;transcript_name=CHM13_chrY_T0000073;gene_name=ENSG00000310544;ID=CHM13_chrY_T0000073;Name=ENSG00000310544
CHM13_chrY	CAT	exon	1108682	1109616	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000073;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000073;transcript_name=CHM13_chrY_T0000073;gene_name=ENSG00000310544;ID=exon:CHM13_chrY_T0000073:0;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1109617	1122690	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000073;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000073;transcript_name=CHM13_chrY_T0000073;gene_name=ENSG00000310544;ID=intron:CHM13_chrY_T0000073:0;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1122691	1124202	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=249.621;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;transcript_id=CHM13_chrY_T0000073;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000073;transcript_name=CHM13_chrY_T0000073;gene_name=ENSG00000310544;ID=exon:CHM13_chrY_T0000073:1;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1109488	1115260	1000	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=CHM13_chrY_T0000074;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_G0000021;transcript_name=CHM13_chrY_T0000074;gene_name=ENSG00000310544;ID=CHM13_chrY_T0000074;Name=ENSG00000310544
CHM13_chrY	CAT	exon	1109488	1109616	.	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=CHM13_chrY_T0000074;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000074;transcript_name=CHM13_chrY_T0000074;gene_name=ENSG00000310544;ID=exon:CHM13_chrY_T0000074:0;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1109617	1114995	.	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=CHM13_chrY_T0000074;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000074;transcript_name=CHM13_chrY_T0000074;gene_name=ENSG00000310544;ID=intron:CHM13_chrY_T0000074:0;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1114996	1115260	.	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=CHM13_chrY_T0000074;gene_id=CHM13_chrY_G0000021;Parent=CHM13_chrY_T0000074;transcript_name=CHM13_chrY_T0000074;gene_name=ENSG00000310544;ID=exon:CHM13_chrY_T0000074:1;Name=ENSG00000310544;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1129395	1189395	.	+	.	source_gene_common_name=CSF2RA;source_gene=ENSG00000292357.2;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;gene_id=CHM13_chrY_G0000022;gene_biotype=protein_coding;gene_name=CSF2RA;gene_sources=liftoff,transMap_pairwise;ID=CHM13_chrY_G0000022;Name=CSF2RA
CHM13_chrY	CAT	transcript	1129395	1189395	100	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=CHM13_chrY_T0000075;Name=CSF2RA
CHM13_chrY	CAT	exon	1129395	1129481	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000075:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000075:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137248	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000075:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137249	1145145	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000075:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000075:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000075:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000075;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000075:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000075:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000075:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000075:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000075:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000075:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000075:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000075:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000075:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000075:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000075:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000075:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000075:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000075:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1157075	1157208	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000075:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000075:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000075:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1158174	1158203	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000075:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000075:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164513	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000075:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1164378	1164513	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000075:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1164514	1167810	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000075:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1167811	1167907	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000075:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1167811	1167907	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000075:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1167908	1169333	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000075:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169334	1169415	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000075:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1169334	1169415	.	+	1	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000075:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1169416	1189049	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000075:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1189050	1189395	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000075:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1189050	1189085	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000075:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1189083	1189085	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=CHM13_chrY_T0000075;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000075;transcript_name=CHM13_chrY_T0000075;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000075;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129402	1174177	100	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=CHM13_chrY_T0000076;Name=CSF2RA
CHM13_chrY	CAT	exon	1129402	1129481	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000076:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137272	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137273	1145145	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000076:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000076:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000076;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000076:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000076:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000076:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000076:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000076:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000076:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000076:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000076:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000076:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1157075	1157208	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000076:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000076:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1158174	1158203	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000076:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000076:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164513	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1164378	1164513	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000076:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1164514	1167148	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000076:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1167149	1167250	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1167149	1167250	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000076:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1167251	1167810	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000076:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1167811	1167907	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1167811	1167907	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000076:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1167908	1169333	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000076:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169334	1169415	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1169334	1169415	.	+	1	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000076:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1169416	1173644	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000076:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1173645	1174177	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000076:13;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1173645	1173722	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000076:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1173720	1173722	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=CHM13_chrY_T0000076;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000076;transcript_name=CHM13_chrY_T0000076;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000076;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129410	1174624	100	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=CHM13_chrY_T0000077;Name=CSF2RA
CHM13_chrY	CAT	exon	1129410	1129481	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000077:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000077:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137272	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000077:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137273	1145145	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000077:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000077:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000077:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000077;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000077:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000077:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000077:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000077:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000077:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000077:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000077:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000077:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000077:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000077:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000077:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000077:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000077:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000077:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1157075	1157208	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000077:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000077:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000077:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1158174	1158203	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000077:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000077:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164513	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000077:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1164378	1164513	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000077:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1164514	1167810	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000077:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1167811	1167907	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000077:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1167811	1167907	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000077:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1167908	1169333	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000077:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169334	1169415	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000077:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1169334	1169415	.	+	1	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000077:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1169416	1173644	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000077:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1173645	1174624	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000077:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1173645	1173722	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000077:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1173720	1173722	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=CHM13_chrY_T0000077;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000077;transcript_name=CHM13_chrY_T0000077;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000077;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129416	1174178	100	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=CHM13_chrY_T0000078;Name=CSF2RA
CHM13_chrY	CAT	exon	1129416	1129481	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000078:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000078:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137248	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000078:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137249	1145145	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000078:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000078:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000078:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000078;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000078:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000078:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000078:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000078:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000078:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000078:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000078:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000078:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000078:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000078:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000078:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000078:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000078:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000078:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1157075	1157208	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000078:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000078:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000078:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1158174	1158203	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000078:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000078:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164513	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000078:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1164378	1164513	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000078:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1164514	1167810	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000078:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1167811	1167907	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000078:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1167811	1167907	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000078:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1167908	1169333	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000078:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169334	1169415	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000078:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1169334	1169415	.	+	1	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000078:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1169416	1173644	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000078:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1173645	1174178	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000078:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1173645	1173722	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000078:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1173720	1173722	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=CHM13_chrY_T0000078;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000078;transcript_name=CHM13_chrY_T0000078;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000078;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129416	1173961	1000	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=CHM13_chrY_T0000079;Name=CSF2RA
CHM13_chrY	CAT	exon	1129416	1129481	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000079:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137272	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137273	1145145	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000079:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145510	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145351	.	+	0	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000079:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000079;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1145349	1145351	.	+	0	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000079;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145511	1148236	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000079:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000079:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000079:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000079:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000079:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000079:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000079:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164513	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1164514	1167148	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000079:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1167149	1167250	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1167251	1167810	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000079:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1167811	1167907	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1167908	1169333	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000079:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169334	1169415	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1169416	1173644	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000079:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1173645	1173961	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=CHM13_chrY_T0000079;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000079;transcript_name=CHM13_chrY_T0000079;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000079:13;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129416	1164430	1000	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=CHM13_chrY_T0000080;Name=CSF2RA
CHM13_chrY	CAT	exon	1129416	1129481	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000080:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000080:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137272	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000080:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137273	1145145	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000080:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000080:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1150969	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000080:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000080:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000080:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000080:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000080:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000080:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000080:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000080:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000080:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000080:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000080:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164430	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=CHM13_chrY_T0000080;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000080;transcript_name=CHM13_chrY_T0000080;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000080:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129420	1157142	100	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=CHM13_chrY_T0000081;Name=CSF2RA
CHM13_chrY	CAT	exon	1129420	1129481	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000081:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1145145	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000081:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000081:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000081:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000081;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000081:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000081:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000081:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000081:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000081:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000081:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000081:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000081:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000081:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000081:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000081:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000081:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000081:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157142	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000081:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1157075	1157142	.	+	2	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=CHM13_chrY_T0000081;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000081;transcript_name=CHM13_chrY_T0000081;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000081:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129420	1187197	100	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=CHM13_chrY_T0000082;Name=CSF2RA
CHM13_chrY	CAT	exon	1129420	1129481	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000082:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137272	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137273	1145145	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000082:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000082:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000082;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000082:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000082:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000082:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000082:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000082:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000082:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000082:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000082:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000082:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1157075	1157208	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000082:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000082:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1158174	1158203	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000082:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000082:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164513	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1164378	1164513	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000082:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1164514	1167810	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000082:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1167811	1167907	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1167811	1167907	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000082:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1167908	1169333	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000082:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169334	1169415	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1169334	1169415	.	+	1	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000082:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1169416	1186487	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000082:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1186488	1186510	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1186488	1186510	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000082:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1186511	1186842	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000082:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1186843	1187197	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000082:13;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1186843	1186990	.	+	1	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000082:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1186988	1186990	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=CHM13_chrY_T0000082;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000082;transcript_name=CHM13_chrY_T0000082;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000082;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129432	1174167	100	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=CHM13_chrY_T0000083;Name=CSF2RA
CHM13_chrY	CAT	exon	1129432	1129481	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000083:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137248	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137249	1144876	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000083:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1144877	1145028	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145029	1145145	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000083:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000083:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000083;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000083:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000083:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000083:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000083:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000083:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000083:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000083:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000083:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000083:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1157075	1157208	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000083:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000083:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1158174	1158203	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000083:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000083:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164513	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1164378	1164513	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000083:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1164514	1167810	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000083:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1167811	1167907	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1167811	1167907	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000083:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1167908	1169333	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000083:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169334	1169415	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1169334	1169415	.	+	1	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000083:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1169416	1173644	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000083:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1173645	1174167	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000083:13;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1173645	1173722	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000083:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1173720	1173722	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=CHM13_chrY_T0000083;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000083;transcript_name=CHM13_chrY_T0000083;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000083;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129434	1169829	100	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=CHM13_chrY_T0000084;Name=CSF2RA
CHM13_chrY	CAT	exon	1129434	1129481	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000084:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000084:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137272	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000084:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137273	1145145	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000084:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000084:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000084:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000084;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000084:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000084:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000084:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000084:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000084:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000084:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000084:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000084:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000084:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000084:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000084:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000084:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000084:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000084:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1157075	1157208	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000084:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000084:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000084:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1158174	1158203	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000084:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000084:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164513	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000084:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1164378	1164513	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000084:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1164514	1167810	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000084:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1167811	1167907	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000084:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1167811	1167907	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000084:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1167908	1169333	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000084:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169334	1169415	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000084:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1169334	1169415	.	+	1	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000084:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1169416	1169515	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000084:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169516	1169829	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000084:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1169516	1169623	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000084:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1169621	1169623	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=CHM13_chrY_T0000084;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000084;transcript_name=CHM13_chrY_T0000084;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000084;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129434	1174165	100	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=CHM13_chrY_T0000085;Name=CSF2RA
CHM13_chrY	CAT	exon	1129434	1129481	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000085:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000085:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137272	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000085:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137273	1145145	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000085:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000085:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000085:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000085;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000085:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000085:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000085:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1149624	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000085:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1149625	1149649	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000085:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1149625	1149649	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000085:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1149650	1174082	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000085:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1174083	1174165	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000085:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1174083	1174111	.	+	2	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000085:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1174109	1174111	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=CHM13_chrY_T0000085;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000085;transcript_name=CHM13_chrY_T0000085;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000085;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129436	1187216	100	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=CHM13_chrY_T0000086;Name=CSF2RA
CHM13_chrY	CAT	exon	1129436	1129481	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000086:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000086:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137272	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000086:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137273	1145145	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000086:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000086:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000086:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000086;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000086:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000086:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000086:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000086:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000086:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000086:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000086:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000086:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000086:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000086:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000086:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000086:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000086:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000086:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1157075	1157208	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000086:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000086:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000086:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1158174	1158203	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000086:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000086:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164513	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000086:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1164378	1164513	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000086:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1164514	1167810	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000086:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1167811	1167907	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000086:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1167811	1167907	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000086:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1167908	1169333	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000086:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169334	1169415	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000086:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1169334	1169415	.	+	1	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000086:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1169416	1186487	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000086:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1186488	1187216	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000086:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1186488	1186514	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000086:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1186512	1186514	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=CHM13_chrY_T0000086;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000086;transcript_name=CHM13_chrY_T0000086;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000086;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129436	1189238	100	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=CHM13_chrY_T0000087;Name=CSF2RA
CHM13_chrY	CAT	exon	1129436	1129481	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000087:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000087:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137272	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000087:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137273	1145145	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000087:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000087:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000087:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000087;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000087:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000087:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000087:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000087:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000087:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000087:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000087:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000087:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000087:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000087:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000087:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000087:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000087:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000087:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1157075	1157208	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000087:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000087:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000087:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1158174	1158203	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000087:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000087:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164513	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000087:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1164378	1164513	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000087:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1164514	1167810	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000087:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1167811	1167907	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000087:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1167811	1167907	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000087:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1167908	1169333	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000087:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169334	1169415	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000087:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1169334	1169415	.	+	1	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000087:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1169416	1189049	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000087:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1189050	1189238	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000087:12;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1189050	1189085	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000087:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1189083	1189085	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=CHM13_chrY_T0000087;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000087;transcript_name=CHM13_chrY_T0000087;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000087;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129437	1144688	1000	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=299.56399999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=CHM13_chrY_T0000088;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000088;gene_name=CSF2RA;ID=CHM13_chrY_T0000088;Name=CSF2RA
CHM13_chrY	CAT	exon	1129437	1129481	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=299.56399999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=CHM13_chrY_T0000088;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000088;transcript_name=CHM13_chrY_T0000088;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000088:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=299.56399999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=CHM13_chrY_T0000088;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000088;transcript_name=CHM13_chrY_T0000088;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000088:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137248	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=299.56399999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=CHM13_chrY_T0000088;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000088;transcript_name=CHM13_chrY_T0000088;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000088:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137249	1144334	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=299.56399999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=CHM13_chrY_T0000088;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000088;transcript_name=CHM13_chrY_T0000088;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000088:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1144335	1144688	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=299.56399999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=CHM13_chrY_T0000088;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000088;transcript_name=CHM13_chrY_T0000088;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000088:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129447	1174177	100	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=CHM13_chrY_T0000089;Name=CSF2RA
CHM13_chrY	CAT	exon	1129447	1129481	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000089:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000089:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137272	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000089:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137273	1145145	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000089:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000089:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000089:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000089;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000089:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000089:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000089:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000089:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000089:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000089:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000089:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000089:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000089:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000089:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000089:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000089:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000089:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000089:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1157075	1157208	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000089:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000089:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000089:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1158174	1158203	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000089:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000089:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164513	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000089:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1164378	1164513	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000089:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1164514	1173644	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000089:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1173645	1174177	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000089:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1173645	1173832	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000089:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1173830	1173832	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=CHM13_chrY_T0000089;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000089;transcript_name=CHM13_chrY_T0000089;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000089;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129447	1174177	100	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=CHM13_chrY_T0000090;Name=CSF2RA
CHM13_chrY	CAT	exon	1129447	1129481	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000090:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000090:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137272	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000090:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137273	1145145	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000090:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000090:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000090:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000090;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000090:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000090:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000090:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000090:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000090:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000090:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000090:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000090:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000090:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000090:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000090:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000090:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1169333	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000090:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169334	1169415	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000090:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1169334	1169389	.	+	2	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000090:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1169387	1169389	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000090;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1169416	1173644	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000090:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1173645	1174177	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=CHM13_chrY_T0000090;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000090;transcript_name=CHM13_chrY_T0000090;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000090:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1129447	1174177	1000	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=CHM13_chrY_T0000091;Name=CSF2RA
CHM13_chrY	CAT	exon	1129447	1129481	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000091:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1129482	1137184	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000091:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1137185	1137272	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000091:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1137273	1145145	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000091:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1145146	1145247	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000091:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000091:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000091;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000091:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000091:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000091:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000091:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000091:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000091:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000091:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000091:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000091:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000091:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000091:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000091:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000091:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000091:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1157075	1157208	.	+	2	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000091:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000091:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000091:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1158174	1158203	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000091:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1167810	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000091:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1167811	1167907	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000091:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1167811	1167858	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000091:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1167856	1167858	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000091;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1167908	1169333	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000091:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169334	1169415	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000091:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1169416	1173644	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000091:10;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1173645	1174177	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=CHM13_chrY_T0000091;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000091;transcript_name=CHM13_chrY_T0000091;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000091:11;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1145154	1173881	100	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=CHM13_chrY_T0000092;Name=CSF2RA
CHM13_chrY	CAT	exon	1145154	1145247	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000092:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1145172	1145247	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000092:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1145172	1145174	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=start_codon:CHM13_chrY_T0000092;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1145248	1148236	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000092:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1148237	1148379	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000092:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1148237	1148379	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000092:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000092:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151093	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000092:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1150970	1151093	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000092:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000092:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151339	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000092:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1151210	1151339	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000092:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151340	1152785	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000092:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1152786	1152958	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000092:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1152786	1152958	.	+	1	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000092:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000092:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000092:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1157075	1157208	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000092:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000092:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000092:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1158174	1158203	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000092:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000092:6;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164513	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000092:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1164378	1164513	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000092:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1164514	1169333	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000092:7;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1169334	1169415	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000092:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1169334	1169389	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=CDS:CHM13_chrY_T0000092:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1169387	1169389	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=stop_codon:CHM13_chrY_T0000092;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1169416	1173644	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000092:8;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1173645	1173881	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=CHM13_chrY_T0000092;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000092;transcript_name=CHM13_chrY_T0000092;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000092:9;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1148108	1151091	1000	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=CHM13_chrY_T0000093;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000093;gene_name=CSF2RA;ID=CHM13_chrY_T0000093;Name=CSF2RA
CHM13_chrY	CAT	exon	1148108	1148379	.	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=CHM13_chrY_T0000093;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000093;transcript_name=CHM13_chrY_T0000093;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000093:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1148380	1150969	.	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=CHM13_chrY_T0000093;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000093;transcript_name=CHM13_chrY_T0000093;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000093:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1150970	1151091	.	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=CHM13_chrY_T0000093;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000093;transcript_name=CHM13_chrY_T0000093;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000093:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1151049	1151556	1000	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=CHM13_chrY_T0000094;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000094;gene_name=CSF2RA;ID=CHM13_chrY_T0000094;Name=CSF2RA
CHM13_chrY	CAT	exon	1151049	1151093	.	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=CHM13_chrY_T0000094;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000094;transcript_name=CHM13_chrY_T0000094;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000094:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1151094	1151209	.	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=CHM13_chrY_T0000094;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000094;transcript_name=CHM13_chrY_T0000094;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000094:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1151210	1151556	.	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=CHM13_chrY_T0000094;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000094;transcript_name=CHM13_chrY_T0000094;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000094:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1152902	1174165	1000	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=CHM13_chrY_T0000095;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000095;gene_name=CSF2RA;ID=CHM13_chrY_T0000095;Name=CSF2RA
CHM13_chrY	CAT	exon	1152902	1152958	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=CHM13_chrY_T0000095;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000095;transcript_name=CHM13_chrY_T0000095;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000095:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1152959	1157074	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=CHM13_chrY_T0000095;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000095;transcript_name=CHM13_chrY_T0000095;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000095:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1157075	1157208	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=CHM13_chrY_T0000095;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000095;transcript_name=CHM13_chrY_T0000095;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000095:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=CHM13_chrY_T0000095;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000095;transcript_name=CHM13_chrY_T0000095;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000095:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158203	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=CHM13_chrY_T0000095;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000095;transcript_name=CHM13_chrY_T0000095;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000095:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158204	1164377	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=CHM13_chrY_T0000095;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000095;transcript_name=CHM13_chrY_T0000095;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000095:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1164378	1164513	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=CHM13_chrY_T0000095;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000095;transcript_name=CHM13_chrY_T0000095;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000095:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1164514	1166784	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=CHM13_chrY_T0000095;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000095;transcript_name=CHM13_chrY_T0000095;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000095:3;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1166785	1166804	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=CHM13_chrY_T0000095;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000095;transcript_name=CHM13_chrY_T0000095;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000095:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1166805	1174066	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=CHM13_chrY_T0000095;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000095;transcript_name=CHM13_chrY_T0000095;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000095:4;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1174067	1174165	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=CHM13_chrY_T0000095;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000095;transcript_name=CHM13_chrY_T0000095;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000095:5;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1156972	1158325	1000	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1;transcript_id=CHM13_chrY_T0000099;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000099;gene_name=CSF2RA;ID=CHM13_chrY_T0000099;Name=CSF2RA
CHM13_chrY	CAT	exon	1156972	1157208	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1;transcript_id=CHM13_chrY_T0000099;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000099;transcript_name=CHM13_chrY_T0000099;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000099:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1;transcript_id=CHM13_chrY_T0000099;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000099;transcript_name=CHM13_chrY_T0000099;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000099:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158325	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1;transcript_id=CHM13_chrY_T0000099;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000099;transcript_name=CHM13_chrY_T0000099;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000099:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1156972	1158664	1000	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=CHM13_chrY_T0000100;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_G0000022;transcript_name=CHM13_chrY_T0000100;gene_name=CSF2RA;ID=CHM13_chrY_T0000100;Name=CSF2RA
CHM13_chrY	CAT	exon	1156972	1157208	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=CHM13_chrY_T0000100;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000100;transcript_name=CHM13_chrY_T0000100;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000100:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1157209	1158173	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=CHM13_chrY_T0000100;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000100;transcript_name=CHM13_chrY_T0000100;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000100:0;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158174	1158322	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=CHM13_chrY_T0000100;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000100;transcript_name=CHM13_chrY_T0000100;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000100:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1158323	1158661	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=CHM13_chrY_T0000100;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000100;transcript_name=CHM13_chrY_T0000100;gene_name=CSF2RA;ID=intron:CHM13_chrY_T0000100:1;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1158662	1158664	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711230.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;transcript_id=CHM13_chrY_T0000100;gene_id=CHM13_chrY_G0000022;Parent=CHM13_chrY_T0000100;transcript_name=CHM13_chrY_T0000100;gene_name=CSF2RA;ID=exon:CHM13_chrY_T0000100:2;Name=CSF2RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1156057	1156131	.	+	.	source_gene_common_name=MIR3690;source_gene=ENSG00000292355.1;gene_id=CHM13_chrY_G0000023;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=CHM13_chrY_G0000023;Name=MIR3690
CHM13_chrY	CAT	transcript	1156057	1156131	1000	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;transcript_id=CHM13_chrY_T0000096;gene_id=CHM13_chrY_G0000023;Parent=CHM13_chrY_G0000023;transcript_name=CHM13_chrY_T0000096;gene_name=MIR3690;ID=CHM13_chrY_T0000096;Name=MIR3690
CHM13_chrY	CAT	exon	1156057	1156131	.	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;transcript_id=CHM13_chrY_T0000096;gene_id=CHM13_chrY_G0000023;Parent=CHM13_chrY_T0000096;transcript_name=CHM13_chrY_T0000096;gene_name=MIR3690;ID=exon:CHM13_chrY_T0000096:0;Name=MIR3690;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1156360	1156434	.	+	.	source_gene_common_name=MIR3690;source_gene=ENSG00000292355.1;alternative_source_transcripts=ENST00000711140.1;gene_id=CHM13_chrY_G0000024;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=CHM13_chrY_G0000024;Name=MIR3690
CHM13_chrY	CAT	transcript	1156360	1156434	1000	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=ENST00000711140.1;transcript_id=CHM13_chrY_T0000097;gene_id=CHM13_chrY_G0000024;Parent=CHM13_chrY_G0000024;transcript_name=CHM13_chrY_T0000097;gene_name=MIR3690;ID=CHM13_chrY_T0000097;Name=MIR3690
CHM13_chrY	CAT	exon	1156360	1156434	.	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=ENST00000711140.1;transcript_id=CHM13_chrY_T0000097;gene_id=CHM13_chrY_G0000024;Parent=CHM13_chrY_T0000097;transcript_name=CHM13_chrY_T0000097;gene_name=MIR3690;ID=exon:CHM13_chrY_T0000097:0;Name=MIR3690;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1156663	1156737	.	+	.	source_gene_common_name=MIR3690;source_gene=ENSG00000292355.1;alternative_source_transcripts=ENST00000711140.1;gene_id=CHM13_chrY_G0000025;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=CHM13_chrY_G0000025;Name=MIR3690
CHM13_chrY	CAT	transcript	1156663	1156737	1000	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=ENST00000711140.1;transcript_id=CHM13_chrY_T0000098;gene_id=CHM13_chrY_G0000025;Parent=CHM13_chrY_G0000025;transcript_name=CHM13_chrY_T0000098;gene_name=MIR3690;ID=CHM13_chrY_T0000098;Name=MIR3690
CHM13_chrY	CAT	exon	1156663	1156737	.	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=ENST00000711140.1;transcript_id=CHM13_chrY_T0000098;gene_id=CHM13_chrY_G0000025;Parent=CHM13_chrY_T0000098;transcript_name=CHM13_chrY_T0000098;gene_name=MIR3690;ID=exon:CHM13_chrY_T0000098:0;Name=MIR3690;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1164143	1164262	.	-	.	source_gene_common_name=RNA5SP498;source_gene=ENSG00000292356.1;alternative_source_transcripts=ENST00000711139.1,ENST00000711139.1;gene_id=CHM13_chrY_G0000026;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP498;gene_sources=liftoff;ID=CHM13_chrY_G0000026;Name=RNA5SP498
CHM13_chrY	CAT	transcript	1164143	1164262	1000	-	.	source_transcript=ENST00000711139.1;source_transcript_name=RNA5SP498-202;source_gene=ENSG00000292356.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000292356.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000711139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711139.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP498;alternative_source_transcripts=ENST00000711139.1,ENST00000711139.1;transcript_id=CHM13_chrY_T0000101;gene_id=CHM13_chrY_G0000026;Parent=CHM13_chrY_G0000026;transcript_name=CHM13_chrY_T0000101;gene_name=RNA5SP498;ID=CHM13_chrY_T0000101;Name=RNA5SP498
CHM13_chrY	CAT	exon	1164143	1164262	.	-	.	source_transcript=ENST00000711139.1;source_transcript_name=RNA5SP498-202;source_gene=ENSG00000292356.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000292356.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000711139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711139.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP498;alternative_source_transcripts=ENST00000711139.1,ENST00000711139.1;transcript_id=CHM13_chrY_T0000101;gene_id=CHM13_chrY_G0000026;Parent=CHM13_chrY_T0000101;transcript_name=CHM13_chrY_T0000101;gene_name=RNA5SP498;ID=exon:CHM13_chrY_T0000101:0;Name=RNA5SP498;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1201381	1246464	.	+	.	source_gene_common_name=IL3RA;source_gene=ENSG00000292332.1;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;gene_id=CHM13_chrY_G0000027;gene_biotype=protein_coding;gene_name=IL3RA;gene_sources=liftoff;ID=CHM13_chrY_G0000027;Name=IL3RA
CHM13_chrY	CAT	transcript	1201381	1246464	100	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_G0000027;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=CHM13_chrY_T0000102;Name=IL3RA
CHM13_chrY	CAT	exon	1201381	1201691	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000102:0;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1201692	1206489	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000102:0;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1206490	1206591	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000102:1;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1206528	1206591	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000102:0;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1206528	1206530	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=start_codon:CHM13_chrY_T0000102;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1206592	1216876	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000102:1;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1216877	1217009	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000102:2;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1216877	1217009	.	+	2	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000102:1;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1217010	1217098	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000102:2;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1217099	1217283	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000102:3;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1217099	1217283	.	+	1	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000102:2;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1217284	1220958	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000102:3;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1220959	1221074	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000102:4;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1220959	1221074	.	+	2	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000102:3;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1221075	1223598	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000102:4;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1223599	1223625	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000102:5;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1223599	1223625	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000102:4;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1223626	1229918	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000102:5;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1229919	1230033	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000102:6;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1229919	1230033	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000102:5;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1230034	1242335	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000102:6;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1242336	1242441	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000102:7;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1242336	1242441	.	+	2	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000102:6;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1242442	1244718	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000102:7;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1244719	1244800	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000102:8;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1244719	1244800	.	+	1	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000102:7;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1244801	1246164	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000102:8;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1246165	1246464	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000102:9;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1246165	1246239	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000102:8;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1246237	1246239	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=CHM13_chrY_T0000102;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000102;transcript_name=CHM13_chrY_T0000102;gene_name=IL3RA;ID=stop_codon:CHM13_chrY_T0000102;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1201550	1246464	100	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_G0000027;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=CHM13_chrY_T0000103;Name=IL3RA
CHM13_chrY	CAT	exon	1201550	1201691	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000103:0;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1201692	1206489	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000103:0;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1206490	1206591	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000103:1;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1206528	1206591	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000103:0;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1206528	1206530	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=start_codon:CHM13_chrY_T0000103;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1206592	1210081	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000103:1;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1210082	1210200	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000103:2;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1210082	1210200	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000103:1;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1210201	1213199	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000103:2;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1213200	1213314	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000103:3;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1213200	1213314	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000103:2;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1213315	1216876	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000103:3;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1216877	1217009	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000103:4;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1216877	1217009	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000103:3;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1217010	1217098	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000103:4;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1217099	1217283	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000103:5;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1217099	1217283	.	+	1	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000103:4;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1217284	1220958	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000103:5;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1220959	1221074	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000103:6;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1220959	1221074	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000103:5;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1221075	1223598	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000103:6;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1223599	1223625	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000103:7;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1223599	1223625	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000103:6;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1223626	1229918	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000103:7;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1229919	1230033	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000103:8;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1229919	1230033	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000103:7;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1230034	1242335	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000103:8;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1242336	1242441	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000103:9;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1242336	1242441	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000103:8;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1242442	1244718	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000103:9;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1244719	1244800	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000103:10;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1244719	1244800	.	+	1	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000103:9;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1244801	1246164	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000103:10;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1246165	1246464	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000103:11;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1246165	1246239	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000103:10;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1246237	1246239	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=CHM13_chrY_T0000103;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000103;transcript_name=CHM13_chrY_T0000103;gene_name=IL3RA;ID=stop_codon:CHM13_chrY_T0000103;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1201561	1221069	100	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_G0000027;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=CHM13_chrY_T0000104;Name=IL3RA
CHM13_chrY	CAT	exon	1201561	1201691	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000104:0;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1201692	1206489	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000104:0;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1206490	1206591	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000104:1;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1206528	1206591	.	+	0	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000104:0;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1206528	1206530	.	+	0	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=start_codon:CHM13_chrY_T0000104;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1206592	1216876	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000104:1;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1216877	1217009	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000104:2;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1216877	1217009	.	+	2	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000104:1;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1217010	1217098	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000104:2;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1217099	1217283	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000104:3;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1217099	1217283	.	+	1	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000104:2;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1217284	1220958	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=intron:CHM13_chrY_T0000104:3;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1220959	1221069	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=exon:CHM13_chrY_T0000104:4;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1220959	1221069	.	+	2	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=CHM13_chrY_T0000104;gene_id=CHM13_chrY_G0000027;Parent=CHM13_chrY_T0000104;transcript_name=CHM13_chrY_T0000104;gene_name=IL3RA;ID=CDS:CHM13_chrY_T0000104:3;Name=IL3RA;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1201930	1206579	.	-	.	source_gene_common_name=ENSG00000310549;source_gene=ENSG00000310549.1;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;gene_id=CHM13_chrY_G0000028;gene_biotype=lncRNA;gene_name=ENSG00000310549;gene_sources=liftoff;ID=CHM13_chrY_G0000028;Name=ENSG00000310549
CHM13_chrY	CAT	transcript	1201930	1206579	1000	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.65;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=CHM13_chrY_T0000105;gene_id=CHM13_chrY_G0000028;Parent=CHM13_chrY_G0000028;transcript_name=CHM13_chrY_T0000105;gene_name=ENSG00000310549;ID=CHM13_chrY_T0000105;Name=ENSG00000310549
CHM13_chrY	CAT	exon	1201930	1202281	.	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=CHM13_chrY_T0000105;gene_id=CHM13_chrY_G0000028;Parent=CHM13_chrY_T0000105;transcript_name=CHM13_chrY_T0000105;gene_name=ENSG00000310549;ID=exon:CHM13_chrY_T0000105:0;Name=ENSG00000310549;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1202282	1206359	.	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=CHM13_chrY_T0000105;gene_id=CHM13_chrY_G0000028;Parent=CHM13_chrY_T0000105;transcript_name=CHM13_chrY_T0000105;gene_name=ENSG00000310549;ID=intron:CHM13_chrY_T0000105:0;Name=ENSG00000310549;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1206360	1206579	.	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=CHM13_chrY_T0000105;gene_id=CHM13_chrY_G0000028;Parent=CHM13_chrY_T0000105;transcript_name=CHM13_chrY_T0000105;gene_name=ENSG00000310549;ID=exon:CHM13_chrY_T0000105:1;Name=ENSG00000310549;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1203404	1206577	1000	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.45799999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=CHM13_chrY_T0000106;gene_id=CHM13_chrY_G0000028;Parent=CHM13_chrY_G0000028;transcript_name=CHM13_chrY_T0000106;gene_name=ENSG00000310549;ID=CHM13_chrY_T0000106;Name=ENSG00000310549
CHM13_chrY	CAT	exon	1203404	1203554	.	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.45799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=CHM13_chrY_T0000106;gene_id=CHM13_chrY_G0000028;Parent=CHM13_chrY_T0000106;transcript_name=CHM13_chrY_T0000106;gene_name=ENSG00000310549;ID=exon:CHM13_chrY_T0000106:0;Name=ENSG00000310549;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1203555	1206359	.	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.45799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=CHM13_chrY_T0000106;gene_id=CHM13_chrY_G0000028;Parent=CHM13_chrY_T0000106;transcript_name=CHM13_chrY_T0000106;gene_name=ENSG00000310549;ID=intron:CHM13_chrY_T0000106:0;Name=ENSG00000310549;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1206360	1206577	.	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.45799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=CHM13_chrY_T0000106;gene_id=CHM13_chrY_G0000028;Parent=CHM13_chrY_T0000106;transcript_name=CHM13_chrY_T0000106;gene_name=ENSG00000310549;ID=exon:CHM13_chrY_T0000106:1;Name=ENSG00000310549;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1249921	1256001	.	-	.	source_gene_common_name=SLC25A6;source_gene=ENSG00000292334.1;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;gene_id=CHM13_chrY_G0000029;gene_biotype=protein_coding;gene_name=SLC25A6;gene_sources=liftoff;ID=CHM13_chrY_G0000029;Name=SLC25A6
CHM13_chrY	CAT	transcript	1249921	1256001	100	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_G0000029;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=CHM13_chrY_T0000107;Name=SLC25A6
CHM13_chrY	CAT	exon	1249921	1250528	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000107;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=exon:CHM13_chrY_T0000107:0;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1250371	1250528	.	-	2	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000107;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=CDS:CHM13_chrY_T0000107:0;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1250371	1250373	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000107;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=stop_codon:CHM13_chrY_T0000107;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1250529	1251047	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000107;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=intron:CHM13_chrY_T0000107:0;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1251048	1251188	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000107;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=exon:CHM13_chrY_T0000107:1;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1251048	1251188	.	-	2	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000107;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=CDS:CHM13_chrY_T0000107:1;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1251189	1253009	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000107;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=intron:CHM13_chrY_T0000107:1;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1253010	1253496	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000107;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=exon:CHM13_chrY_T0000107:2;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1253010	1253496	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000107;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=CDS:CHM13_chrY_T0000107:2;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1253497	1255786	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000107;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=intron:CHM13_chrY_T0000107:2;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1255787	1256001	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000107;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=exon:CHM13_chrY_T0000107:3;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1255787	1255897	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000107;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=CDS:CHM13_chrY_T0000107:3;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1255895	1255897	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=CHM13_chrY_T0000107;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000107;transcript_name=CHM13_chrY_T0000107;gene_name=SLC25A6;ID=start_codon:CHM13_chrY_T0000107;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1251080	1255991	1000	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=CHM13_chrY_T0000108;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_G0000029;transcript_name=CHM13_chrY_T0000108;gene_name=SLC25A6;ID=CHM13_chrY_T0000108;Name=SLC25A6
CHM13_chrY	CAT	exon	1251080	1251188	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=CHM13_chrY_T0000108;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000108;transcript_name=CHM13_chrY_T0000108;gene_name=SLC25A6;ID=exon:CHM13_chrY_T0000108:0;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1251189	1253009	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=CHM13_chrY_T0000108;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000108;transcript_name=CHM13_chrY_T0000108;gene_name=SLC25A6;ID=intron:CHM13_chrY_T0000108:0;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1253010	1253496	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=CHM13_chrY_T0000108;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000108;transcript_name=CHM13_chrY_T0000108;gene_name=SLC25A6;ID=exon:CHM13_chrY_T0000108:1;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1253497	1253960	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=CHM13_chrY_T0000108;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000108;transcript_name=CHM13_chrY_T0000108;gene_name=SLC25A6;ID=intron:CHM13_chrY_T0000108:1;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1253961	1254059	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=CHM13_chrY_T0000108;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000108;transcript_name=CHM13_chrY_T0000108;gene_name=SLC25A6;ID=exon:CHM13_chrY_T0000108:2;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1254060	1255786	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=CHM13_chrY_T0000108;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000108;transcript_name=CHM13_chrY_T0000108;gene_name=SLC25A6;ID=intron:CHM13_chrY_T0000108:2;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1255787	1255991	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=CHM13_chrY_T0000108;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000108;transcript_name=CHM13_chrY_T0000108;gene_name=SLC25A6;ID=exon:CHM13_chrY_T0000108:3;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1251114	1255976	1000	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=CHM13_chrY_T0000109;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_G0000029;transcript_name=CHM13_chrY_T0000109;gene_name=SLC25A6;ID=CHM13_chrY_T0000109;Name=SLC25A6
CHM13_chrY	CAT	exon	1251114	1251188	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=CHM13_chrY_T0000109;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000109;transcript_name=CHM13_chrY_T0000109;gene_name=SLC25A6;ID=exon:CHM13_chrY_T0000109:0;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1251189	1253009	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=CHM13_chrY_T0000109;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000109;transcript_name=CHM13_chrY_T0000109;gene_name=SLC25A6;ID=intron:CHM13_chrY_T0000109:0;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1253010	1253496	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=CHM13_chrY_T0000109;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000109;transcript_name=CHM13_chrY_T0000109;gene_name=SLC25A6;ID=exon:CHM13_chrY_T0000109:1;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1253497	1253960	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=CHM13_chrY_T0000109;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000109;transcript_name=CHM13_chrY_T0000109;gene_name=SLC25A6;ID=intron:CHM13_chrY_T0000109:1;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1253961	1254062	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=CHM13_chrY_T0000109;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000109;transcript_name=CHM13_chrY_T0000109;gene_name=SLC25A6;ID=exon:CHM13_chrY_T0000109:2;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1254063	1255786	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=CHM13_chrY_T0000109;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000109;transcript_name=CHM13_chrY_T0000109;gene_name=SLC25A6;ID=intron:CHM13_chrY_T0000109:2;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1255787	1255976	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=CHM13_chrY_T0000109;gene_id=CHM13_chrY_G0000029;Parent=CHM13_chrY_T0000109;transcript_name=CHM13_chrY_T0000109;gene_name=SLC25A6;ID=exon:CHM13_chrY_T0000109:3;Name=SLC25A6;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1256567	1264432	.	+	.	source_gene_common_name=LINC00106;source_gene=ENSG00000292341.2;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;gene_id=CHM13_chrY_G0000030;gene_biotype=lncRNA;gene_name=LINC00106;gene_sources=liftoff;ID=CHM13_chrY_G0000030;Name=LINC00106
CHM13_chrY	CAT	transcript	1256567	1264432	1000	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=CHM13_chrY_T0000110;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_G0000030;transcript_name=CHM13_chrY_T0000110;gene_name=LINC00106;ID=CHM13_chrY_T0000110;Name=LINC00106
CHM13_chrY	CAT	exon	1256567	1256651	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=CHM13_chrY_T0000110;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000110;transcript_name=CHM13_chrY_T0000110;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000110:0;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1256652	1260279	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=CHM13_chrY_T0000110;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000110;transcript_name=CHM13_chrY_T0000110;gene_name=LINC00106;ID=intron:CHM13_chrY_T0000110:0;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1260280	1260556	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=CHM13_chrY_T0000110;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000110;transcript_name=CHM13_chrY_T0000110;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000110:1;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1260557	1262732	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=CHM13_chrY_T0000110;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000110;transcript_name=CHM13_chrY_T0000110;gene_name=LINC00106;ID=intron:CHM13_chrY_T0000110:1;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1262733	1262866	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=CHM13_chrY_T0000110;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000110;transcript_name=CHM13_chrY_T0000110;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000110:2;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1262867	1264068	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=CHM13_chrY_T0000110;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000110;transcript_name=CHM13_chrY_T0000110;gene_name=LINC00106;ID=intron:CHM13_chrY_T0000110:2;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1264069	1264432	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=CHM13_chrY_T0000110;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000110;transcript_name=CHM13_chrY_T0000110;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000110:3;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1256617	1263320	1000	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=CHM13_chrY_T0000111;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_G0000030;transcript_name=CHM13_chrY_T0000111;gene_name=LINC00106;ID=CHM13_chrY_T0000111;Name=LINC00106
CHM13_chrY	CAT	exon	1256617	1256651	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=CHM13_chrY_T0000111;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000111;transcript_name=CHM13_chrY_T0000111;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000111:0;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1256652	1260279	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=CHM13_chrY_T0000111;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000111;transcript_name=CHM13_chrY_T0000111;gene_name=LINC00106;ID=intron:CHM13_chrY_T0000111:0;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1260280	1260556	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=CHM13_chrY_T0000111;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000111;transcript_name=CHM13_chrY_T0000111;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000111:1;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1260557	1262732	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=CHM13_chrY_T0000111;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000111;transcript_name=CHM13_chrY_T0000111;gene_name=LINC00106;ID=intron:CHM13_chrY_T0000111:1;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1262733	1262866	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=CHM13_chrY_T0000111;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000111;transcript_name=CHM13_chrY_T0000111;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000111:2;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1262867	1263274	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=CHM13_chrY_T0000111;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000111;transcript_name=CHM13_chrY_T0000111;gene_name=LINC00106;ID=intron:CHM13_chrY_T0000111:2;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1263275	1263320	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=CHM13_chrY_T0000111;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000111;transcript_name=CHM13_chrY_T0000111;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000111:3;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1260280	1264432	1000	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=CHM13_chrY_T0000112;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_G0000030;transcript_name=CHM13_chrY_T0000112;gene_name=LINC00106;ID=CHM13_chrY_T0000112;Name=LINC00106
CHM13_chrY	CAT	exon	1260280	1260556	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=CHM13_chrY_T0000112;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000112;transcript_name=CHM13_chrY_T0000112;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000112:0;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1260557	1262732	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=CHM13_chrY_T0000112;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000112;transcript_name=CHM13_chrY_T0000112;gene_name=LINC00106;ID=intron:CHM13_chrY_T0000112:0;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1262733	1262866	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=CHM13_chrY_T0000112;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000112;transcript_name=CHM13_chrY_T0000112;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000112:1;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1262867	1264071	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=CHM13_chrY_T0000112;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000112;transcript_name=CHM13_chrY_T0000112;gene_name=LINC00106;ID=intron:CHM13_chrY_T0000112:1;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1264072	1264432	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=CHM13_chrY_T0000112;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000112;transcript_name=CHM13_chrY_T0000112;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000112:2;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1260933	1263310	1000	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=CHM13_chrY_T0000113;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_G0000030;transcript_name=CHM13_chrY_T0000113;gene_name=LINC00106;ID=CHM13_chrY_T0000113;Name=LINC00106
CHM13_chrY	CAT	exon	1260933	1261132	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=CHM13_chrY_T0000113;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000113;transcript_name=CHM13_chrY_T0000113;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000113:0;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1261133	1262732	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=CHM13_chrY_T0000113;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000113;transcript_name=CHM13_chrY_T0000113;gene_name=LINC00106;ID=intron:CHM13_chrY_T0000113:0;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1262733	1262866	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=CHM13_chrY_T0000113;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000113;transcript_name=CHM13_chrY_T0000113;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000113:1;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1262867	1263274	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=CHM13_chrY_T0000113;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000113;transcript_name=CHM13_chrY_T0000113;gene_name=LINC00106;ID=intron:CHM13_chrY_T0000113:1;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1263275	1263310	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=CHM13_chrY_T0000113;gene_id=CHM13_chrY_G0000030;Parent=CHM13_chrY_T0000113;transcript_name=CHM13_chrY_T0000113;gene_name=LINC00106;ID=exon:CHM13_chrY_T0000113:2;Name=LINC00106;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1265338	1276403	.	+	.	source_gene_common_name=ASMTL-AS1;source_gene=ENSG00000292331.2;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;gene_id=CHM13_chrY_G0000031;gene_biotype=lncRNA;gene_name=ASMTL-AS1;gene_sources=liftoff;ID=CHM13_chrY_G0000031;Name=ASMTL-AS1
CHM13_chrY	CAT	transcript	1265338	1276403	1000	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=CHM13_chrY_T0000114;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_G0000031;transcript_name=CHM13_chrY_T0000114;gene_name=ASMTL-AS1;ID=CHM13_chrY_T0000114;Name=ASMTL-AS1
CHM13_chrY	CAT	exon	1265338	1265494	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=CHM13_chrY_T0000114;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000114;transcript_name=CHM13_chrY_T0000114;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000114:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1265495	1265931	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=CHM13_chrY_T0000114;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000114;transcript_name=CHM13_chrY_T0000114;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000114:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1265932	1266133	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=CHM13_chrY_T0000114;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000114;transcript_name=CHM13_chrY_T0000114;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000114:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1266134	1267285	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=CHM13_chrY_T0000114;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000114;transcript_name=CHM13_chrY_T0000114;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000114:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1267286	1267410	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=CHM13_chrY_T0000114;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000114;transcript_name=CHM13_chrY_T0000114;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000114:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267411	1275121	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=CHM13_chrY_T0000114;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000114;transcript_name=CHM13_chrY_T0000114;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000114:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275122	1275267	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=CHM13_chrY_T0000114;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000114;transcript_name=CHM13_chrY_T0000114;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000114:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1275268	1276127	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=CHM13_chrY_T0000114;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000114;transcript_name=CHM13_chrY_T0000114;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000114:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1276128	1276403	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=CHM13_chrY_T0000114;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000114;transcript_name=CHM13_chrY_T0000114;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000114:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1265373	1275965	1000	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=CHM13_chrY_T0000115;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_G0000031;transcript_name=CHM13_chrY_T0000115;gene_name=ASMTL-AS1;ID=CHM13_chrY_T0000115;Name=ASMTL-AS1
CHM13_chrY	CAT	exon	1265373	1265494	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=CHM13_chrY_T0000115;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000115;transcript_name=CHM13_chrY_T0000115;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000115:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1265495	1265931	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=CHM13_chrY_T0000115;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000115;transcript_name=CHM13_chrY_T0000115;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000115:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1265932	1266133	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=CHM13_chrY_T0000115;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000115;transcript_name=CHM13_chrY_T0000115;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000115:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1266134	1267285	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=CHM13_chrY_T0000115;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000115;transcript_name=CHM13_chrY_T0000115;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000115:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1267286	1267410	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=CHM13_chrY_T0000115;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000115;transcript_name=CHM13_chrY_T0000115;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000115:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267411	1275121	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=CHM13_chrY_T0000115;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000115;transcript_name=CHM13_chrY_T0000115;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000115:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275122	1275267	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=CHM13_chrY_T0000115;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000115;transcript_name=CHM13_chrY_T0000115;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000115:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1275268	1275602	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=CHM13_chrY_T0000115;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000115;transcript_name=CHM13_chrY_T0000115;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000115:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275603	1275965	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=CHM13_chrY_T0000115;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000115;transcript_name=CHM13_chrY_T0000115;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000115:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1265373	1275534	1000	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=CHM13_chrY_T0000116;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_G0000031;transcript_name=CHM13_chrY_T0000116;gene_name=ASMTL-AS1;ID=CHM13_chrY_T0000116;Name=ASMTL-AS1
CHM13_chrY	CAT	exon	1265373	1265494	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=CHM13_chrY_T0000116;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000116;transcript_name=CHM13_chrY_T0000116;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000116:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1265495	1265931	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=CHM13_chrY_T0000116;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000116;transcript_name=CHM13_chrY_T0000116;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000116:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1265932	1266133	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=CHM13_chrY_T0000116;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000116;transcript_name=CHM13_chrY_T0000116;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000116:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1266134	1267285	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=CHM13_chrY_T0000116;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000116;transcript_name=CHM13_chrY_T0000116;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000116:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1267286	1267410	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=CHM13_chrY_T0000116;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000116;transcript_name=CHM13_chrY_T0000116;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000116:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267411	1275121	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=CHM13_chrY_T0000116;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000116;transcript_name=CHM13_chrY_T0000116;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000116:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275122	1275534	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=CHM13_chrY_T0000116;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000116;transcript_name=CHM13_chrY_T0000116;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000116:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1265383	1276403	1000	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=CHM13_chrY_T0000117;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_G0000031;transcript_name=CHM13_chrY_T0000117;gene_name=ASMTL-AS1;ID=CHM13_chrY_T0000117;Name=ASMTL-AS1
CHM13_chrY	CAT	exon	1265383	1265494	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=CHM13_chrY_T0000117;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000117;transcript_name=CHM13_chrY_T0000117;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000117:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1265495	1265931	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=CHM13_chrY_T0000117;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000117;transcript_name=CHM13_chrY_T0000117;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000117:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1265932	1266133	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=CHM13_chrY_T0000117;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000117;transcript_name=CHM13_chrY_T0000117;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000117:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1266134	1267285	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=CHM13_chrY_T0000117;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000117;transcript_name=CHM13_chrY_T0000117;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000117:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1267286	1267410	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=CHM13_chrY_T0000117;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000117;transcript_name=CHM13_chrY_T0000117;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000117:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267411	1275121	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=CHM13_chrY_T0000117;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000117;transcript_name=CHM13_chrY_T0000117;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000117:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275122	1275267	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=CHM13_chrY_T0000117;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000117;transcript_name=CHM13_chrY_T0000117;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000117:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1275268	1276140	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=CHM13_chrY_T0000117;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000117;transcript_name=CHM13_chrY_T0000117;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000117:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1276141	1276403	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=CHM13_chrY_T0000117;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000117;transcript_name=CHM13_chrY_T0000117;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000117:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1265677	1267318	1000	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=CHM13_chrY_T0000118;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_G0000031;transcript_name=CHM13_chrY_T0000118;gene_name=ASMTL-AS1;ID=CHM13_chrY_T0000118;Name=ASMTL-AS1
CHM13_chrY	CAT	exon	1265677	1266133	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=CHM13_chrY_T0000118;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000118;transcript_name=CHM13_chrY_T0000118;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000118:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1266134	1267201	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=CHM13_chrY_T0000118;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000118;transcript_name=CHM13_chrY_T0000118;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000118:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1267202	1267318	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=CHM13_chrY_T0000118;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000118;transcript_name=CHM13_chrY_T0000118;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000118:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1265719	1276294	1000	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=CHM13_chrY_T0000119;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_G0000031;transcript_name=CHM13_chrY_T0000119;gene_name=ASMTL-AS1;ID=CHM13_chrY_T0000119;Name=ASMTL-AS1
CHM13_chrY	CAT	exon	1265719	1266133	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=CHM13_chrY_T0000119;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000119;transcript_name=CHM13_chrY_T0000119;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000119:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1266134	1267285	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=CHM13_chrY_T0000119;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000119;transcript_name=CHM13_chrY_T0000119;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000119:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1267286	1267410	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=CHM13_chrY_T0000119;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000119;transcript_name=CHM13_chrY_T0000119;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000119:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267411	1275121	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=CHM13_chrY_T0000119;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000119;transcript_name=CHM13_chrY_T0000119;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000119:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275122	1275267	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=CHM13_chrY_T0000119;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000119;transcript_name=CHM13_chrY_T0000119;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000119:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1275268	1276140	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=CHM13_chrY_T0000119;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000119;transcript_name=CHM13_chrY_T0000119;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000119:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1276141	1276294	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=CHM13_chrY_T0000119;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000119;transcript_name=CHM13_chrY_T0000119;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000119:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1265884	1275965	1000	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=CHM13_chrY_T0000120;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_G0000031;transcript_name=CHM13_chrY_T0000120;gene_name=ASMTL-AS1;ID=CHM13_chrY_T0000120;Name=ASMTL-AS1
CHM13_chrY	CAT	exon	1265884	1266133	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=CHM13_chrY_T0000120;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000120;transcript_name=CHM13_chrY_T0000120;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000120:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1266134	1267285	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=CHM13_chrY_T0000120;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000120;transcript_name=CHM13_chrY_T0000120;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000120:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1267286	1267410	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=CHM13_chrY_T0000120;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000120;transcript_name=CHM13_chrY_T0000120;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000120:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267411	1275121	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=CHM13_chrY_T0000120;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000120;transcript_name=CHM13_chrY_T0000120;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000120:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275122	1275965	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=CHM13_chrY_T0000120;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000120;transcript_name=CHM13_chrY_T0000120;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000120:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1267006	1275965	1000	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=CHM13_chrY_T0000126;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_G0000031;transcript_name=CHM13_chrY_T0000126;gene_name=ASMTL-AS1;ID=CHM13_chrY_T0000126;Name=ASMTL-AS1
CHM13_chrY	CAT	exon	1267006	1267410	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=CHM13_chrY_T0000126;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000126;transcript_name=CHM13_chrY_T0000126;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000126:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267411	1275121	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=CHM13_chrY_T0000126;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000126;transcript_name=CHM13_chrY_T0000126;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000126:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275122	1275965	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=CHM13_chrY_T0000126;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000126;transcript_name=CHM13_chrY_T0000126;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000126:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1267284	1276407	1000	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=CHM13_chrY_T0000127;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_G0000031;transcript_name=CHM13_chrY_T0000127;gene_name=ASMTL-AS1;ID=CHM13_chrY_T0000127;Name=ASMTL-AS1
CHM13_chrY	CAT	exon	1267284	1267410	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=CHM13_chrY_T0000127;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000127;transcript_name=CHM13_chrY_T0000127;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000127:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267411	1275121	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=CHM13_chrY_T0000127;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000127;transcript_name=CHM13_chrY_T0000127;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000127:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275122	1275267	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=CHM13_chrY_T0000127;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000127;transcript_name=CHM13_chrY_T0000127;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000127:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1275268	1276127	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=CHM13_chrY_T0000127;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000127;transcript_name=CHM13_chrY_T0000127;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000127:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1276128	1276407	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=CHM13_chrY_T0000127;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000127;transcript_name=CHM13_chrY_T0000127;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000127:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1267335	1276403	1000	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=CHM13_chrY_T0000128;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_G0000031;transcript_name=CHM13_chrY_T0000128;gene_name=ASMTL-AS1;ID=CHM13_chrY_T0000128;Name=ASMTL-AS1
CHM13_chrY	CAT	exon	1267335	1267410	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=CHM13_chrY_T0000128;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000128;transcript_name=CHM13_chrY_T0000128;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000128:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267411	1275169	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=CHM13_chrY_T0000128;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000128;transcript_name=CHM13_chrY_T0000128;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000128:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275170	1275267	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=CHM13_chrY_T0000128;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000128;transcript_name=CHM13_chrY_T0000128;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000128:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1275268	1276142	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=CHM13_chrY_T0000128;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000128;transcript_name=CHM13_chrY_T0000128;gene_name=ASMTL-AS1;ID=intron:CHM13_chrY_T0000128:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1276143	1276403	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=CHM13_chrY_T0000128;gene_id=CHM13_chrY_G0000031;Parent=CHM13_chrY_T0000128;transcript_name=CHM13_chrY_T0000128;gene_name=ASMTL-AS1;ID=exon:CHM13_chrY_T0000128:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1266964	1317006	.	-	.	source_gene_common_name=ASMTL;source_gene=ENSG00000292339.1;gene_id=CHM13_chrY_G0000032;gene_biotype=protein_coding;gene_name=ASMTL;gene_sources=liftoff,transMap,transMap_pairwise;ID=CHM13_chrY_G0000032;Name=ASMTL
CHM13_chrY	CAT	transcript	1266964	1316930	9980	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_G0000032;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=CHM13_chrY_T0000121;Name=ASMTL
CHM13_chrY	CAT	exon	1266964	1267314	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1267094	1267314	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000121:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1267094	1267096	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=stop_codon:CHM13_chrY_T0000121;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267315	1275110	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000121:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275111	1275233	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1275111	1275233	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000121:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1275234	1280364	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000121:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1280365	1280508	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1280365	1280508	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000121:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1280509	1281373	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000121:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1281374	1281506	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1281374	1281506	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000121:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1281507	1284062	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000121:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1284063	1284247	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1284063	1284247	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000121:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1284248	1287929	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000121:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1287930	1288092	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1287930	1288092	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000121:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1288093	1290138	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000121:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1290139	1290526	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1290139	1290526	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000121:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1290527	1294672	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000121:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1294673	1294781	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1294673	1294781	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000121:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1294782	1298234	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000121:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1298235	1298296	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1298235	1298296	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000121:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1298297	1298905	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000121:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1298906	1298970	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1298906	1298970	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000121:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1298971	1302307	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000121:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1302308	1302355	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1302308	1302355	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000121:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1302356	1305396	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000121:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1305397	1305528	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1305397	1305447	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000121:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1305445	1305447	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=start_codon:CHM13_chrY_T0000121;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1305529	1316595	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000121:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1316596	1316732	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:12;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1316733	1316922	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000121:12;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1316923	1316930	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000121;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000121;transcript_name=CHM13_chrY_T0000121;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000121:13;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1266964	1315887	100	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_G0000032;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CHM13_chrY_T0000122;Name=ASMTL
CHM13_chrY	CAT	exon	1266964	1267314	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000122:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1267094	1267314	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000122:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1267094	1267096	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=stop_codon:CHM13_chrY_T0000122;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267315	1275110	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000122:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275111	1275233	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000122:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1275111	1275233	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000122:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1275234	1280364	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000122:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1280365	1280508	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000122:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1280365	1280508	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000122:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1280509	1281373	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000122:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1281374	1281506	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000122:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1281374	1281506	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000122:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1281507	1284062	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000122:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1284063	1284247	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000122:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1284063	1284247	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000122:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1284248	1287929	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000122:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1287930	1288092	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000122:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1287930	1288092	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000122:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1288093	1290138	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000122:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1290139	1290526	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000122:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1290139	1290526	.	-	1	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000122:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1290527	1294672	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000122:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1294673	1294781	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000122:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1294673	1294781	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000122:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1294782	1298234	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000122:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1298235	1298296	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000122:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1298235	1298296	.	-	1	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000122:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1298297	1298905	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000122:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1298906	1298970	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000122:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1298906	1298970	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000122:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1298971	1302307	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000122:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1302308	1302355	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000122:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1302308	1302355	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000122:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1302356	1305396	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000122:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1305397	1305528	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000122:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1305397	1305528	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000122:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1305529	1315725	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000122:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1315726	1315887	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000122:12;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1315726	1315818	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000122:12;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1315816	1315818	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1,ENST00000711197.1;transcript_id=CHM13_chrY_T0000122;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000122;transcript_name=CHM13_chrY_T0000122;gene_name=ASMTL;ID=start_codon:CHM13_chrY_T0000122;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1266964	1317006	9980	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_G0000032;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=CHM13_chrY_T0000123;Name=ASMTL
CHM13_chrY	CAT	exon	1266964	1267314	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1267094	1267314	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000123:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1267094	1267096	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=stop_codon:CHM13_chrY_T0000123;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267315	1275110	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000123:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275111	1275233	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1275111	1275233	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000123:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1275234	1280364	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000123:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1280365	1280508	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1280365	1280508	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000123:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1280509	1281373	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000123:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1281374	1281506	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1281374	1281506	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000123:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1281507	1284062	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000123:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1284063	1284247	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1284063	1284247	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000123:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1284248	1287929	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000123:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1287930	1288092	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1287930	1288092	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000123:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1288093	1290138	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000123:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1290139	1290526	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1290139	1290526	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000123:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1290527	1294672	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000123:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1294673	1294781	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1294673	1294781	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000123:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1294782	1298234	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000123:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1298235	1298296	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1298235	1298296	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000123:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1298297	1298905	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000123:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1298906	1298970	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1298906	1298970	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000123:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1298971	1302307	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000123:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1302308	1302355	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1302308	1302355	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000123:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1302356	1305396	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000123:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1305397	1305528	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1305397	1305447	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000123:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1305445	1305447	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=start_codon:CHM13_chrY_T0000123;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1305529	1316595	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000123:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1316596	1316716	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:12;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1316717	1316982	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000123:12;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1316983	1317006	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000711192.1;transcript_score=299.764;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000123;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000123;transcript_name=CHM13_chrY_T0000123;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000123:13;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1266964	1316740	100	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_G0000032;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=CHM13_chrY_T0000124;Name=ASMTL
CHM13_chrY	CAT	exon	1266964	1267314	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000124:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1267094	1267314	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000124:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1267094	1267096	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=stop_codon:CHM13_chrY_T0000124;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267315	1275110	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000124:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275111	1275233	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000124:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1275111	1275233	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000124:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1275234	1280364	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000124:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1280365	1280508	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000124:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1280365	1280508	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000124:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1280509	1281373	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000124:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1281374	1281506	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000124:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1281374	1281506	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000124:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1281507	1284062	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000124:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1284063	1284247	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000124:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1284063	1284247	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000124:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1284248	1287929	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000124:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1287930	1288092	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000124:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1287930	1288092	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000124:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1288093	1290138	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000124:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1290139	1290526	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000124:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1290139	1290526	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000124:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1290527	1294672	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000124:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1294673	1294781	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000124:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1294673	1294781	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000124:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1294782	1298234	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000124:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1298235	1298296	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000124:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1298235	1298296	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000124:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1298297	1298905	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000124:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1298906	1298970	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000124:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1298906	1298970	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000124:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1298971	1302307	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000124:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1302308	1302355	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000124:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1302308	1302355	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000124:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1302356	1305396	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000124:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1305397	1305528	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000124:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1305397	1305447	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000124:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1305445	1305447	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=start_codon:CHM13_chrY_T0000124;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1305529	1316595	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000124:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1316596	1316740	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=CHM13_chrY_T0000124;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000124;transcript_name=CHM13_chrY_T0000124;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000124:12;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1266966	1315907	100	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_G0000032;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=CHM13_chrY_T0000125;Name=ASMTL
CHM13_chrY	CAT	exon	1266966	1267314	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000125:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1267094	1267314	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000125:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1267094	1267096	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=stop_codon:CHM13_chrY_T0000125;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1267315	1275110	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000125:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1275111	1275233	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000125:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1275111	1275233	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000125:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1275234	1280364	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000125:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1280365	1280508	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000125:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1280365	1280508	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000125:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1280509	1281373	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000125:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1281374	1281506	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000125:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1281374	1281506	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000125:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1281507	1284062	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000125:3;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1284063	1284247	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000125:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1284063	1284247	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000125:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1284248	1287929	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000125:4;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1287930	1288092	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000125:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1287930	1288092	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000125:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1288093	1290138	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000125:5;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1290139	1290526	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000125:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1290139	1290526	.	-	1	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000125:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1290527	1294672	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000125:6;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1294673	1294781	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000125:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1294673	1294781	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000125:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1294782	1298234	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000125:7;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1298235	1298296	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000125:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1298235	1298296	.	-	1	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000125:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1298297	1298905	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000125:8;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1298906	1298970	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000125:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1298906	1298970	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000125:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1298971	1305396	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000125:9;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1305397	1305528	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000125:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1305397	1305528	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000125:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1305529	1315725	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000125:10;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1315726	1315907	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000125:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1315726	1315818	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=CDS:CHM13_chrY_T0000125:11;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1315816	1315818	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1,ENST00000711196.1;transcript_id=CHM13_chrY_T0000125;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000125;transcript_name=CHM13_chrY_T0000125;gene_name=ASMTL;ID=start_codon:CHM13_chrY_T0000125;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1290132	1298603	1000	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.543;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=CHM13_chrY_T0000129;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_G0000032;transcript_name=CHM13_chrY_T0000129;gene_name=ASMTL;ID=CHM13_chrY_T0000129;Name=ASMTL
CHM13_chrY	CAT	exon	1290132	1290526	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=CHM13_chrY_T0000129;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000129;transcript_name=CHM13_chrY_T0000129;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000129:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1290527	1294672	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=CHM13_chrY_T0000129;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000129;transcript_name=CHM13_chrY_T0000129;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000129:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1294673	1294781	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=CHM13_chrY_T0000129;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000129;transcript_name=CHM13_chrY_T0000129;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000129:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1294782	1298234	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=CHM13_chrY_T0000129;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000129;transcript_name=CHM13_chrY_T0000129;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000129:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1298235	1298603	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=CHM13_chrY_T0000129;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000129;transcript_name=CHM13_chrY_T0000129;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000129:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1294306	1298940	1000	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=CHM13_chrY_T0000130;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_G0000032;transcript_name=CHM13_chrY_T0000130;gene_name=ASMTL;ID=CHM13_chrY_T0000130;Name=ASMTL
CHM13_chrY	CAT	exon	1294306	1294781	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=CHM13_chrY_T0000130;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000130;transcript_name=CHM13_chrY_T0000130;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000130:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1294782	1298234	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=CHM13_chrY_T0000130;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000130;transcript_name=CHM13_chrY_T0000130;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000130:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1298235	1298296	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=CHM13_chrY_T0000130;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000130;transcript_name=CHM13_chrY_T0000130;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000130:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1298297	1298905	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=CHM13_chrY_T0000130;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000130;transcript_name=CHM13_chrY_T0000130;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000130:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1298906	1298940	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=CHM13_chrY_T0000130;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000130;transcript_name=CHM13_chrY_T0000130;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000130:2;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1304803	1315850	1000	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=CHM13_chrY_T0000131;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_G0000032;transcript_name=CHM13_chrY_T0000131;gene_name=ASMTL;ID=CHM13_chrY_T0000131;Name=ASMTL
CHM13_chrY	CAT	exon	1304803	1305528	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=CHM13_chrY_T0000131;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000131;transcript_name=CHM13_chrY_T0000131;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000131:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1305529	1315725	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=CHM13_chrY_T0000131;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000131;transcript_name=CHM13_chrY_T0000131;gene_name=ASMTL;ID=intron:CHM13_chrY_T0000131:0;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1315726	1315850	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=CHM13_chrY_T0000131;gene_id=CHM13_chrY_G0000032;Parent=CHM13_chrY_T0000131;transcript_name=CHM13_chrY_T0000131;gene_name=ASMTL;ID=exon:CHM13_chrY_T0000131:1;Name=ASMTL;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1325951	1401516	.	-	.	source_gene_common_name=P2RY8;source_gene=ENSG00000292333.1;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;gene_id=CHM13_chrY_G0000033;gene_biotype=protein_coding;gene_name=P2RY8;gene_sources=liftoff;ID=CHM13_chrY_G0000033;Name=P2RY8
CHM13_chrY	CAT	transcript	1325951	1401516	100	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=CHM13_chrY_T0000132;gene_id=CHM13_chrY_G0000033;Parent=CHM13_chrY_G0000033;transcript_name=CHM13_chrY_T0000132;gene_name=P2RY8;ID=CHM13_chrY_T0000132;Name=P2RY8
CHM13_chrY	CAT	exon	1325951	1329950	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=CHM13_chrY_T0000132;gene_id=CHM13_chrY_G0000033;Parent=CHM13_chrY_T0000132;transcript_name=CHM13_chrY_T0000132;gene_name=P2RY8;ID=exon:CHM13_chrY_T0000132:0;Name=P2RY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1328847	1329926	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=CHM13_chrY_T0000132;gene_id=CHM13_chrY_G0000033;Parent=CHM13_chrY_T0000132;transcript_name=CHM13_chrY_T0000132;gene_name=P2RY8;ID=CDS:CHM13_chrY_T0000132:0;Name=P2RY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1328847	1328849	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=CHM13_chrY_T0000132;gene_id=CHM13_chrY_G0000033;Parent=CHM13_chrY_T0000132;transcript_name=CHM13_chrY_T0000132;gene_name=P2RY8;ID=stop_codon:CHM13_chrY_T0000132;Name=P2RY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1329924	1329926	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=CHM13_chrY_T0000132;gene_id=CHM13_chrY_G0000033;Parent=CHM13_chrY_T0000132;transcript_name=CHM13_chrY_T0000132;gene_name=P2RY8;ID=start_codon:CHM13_chrY_T0000132;Name=P2RY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1329951	1401251	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=CHM13_chrY_T0000132;gene_id=CHM13_chrY_G0000033;Parent=CHM13_chrY_T0000132;transcript_name=CHM13_chrY_T0000132;gene_name=P2RY8;ID=intron:CHM13_chrY_T0000132:0;Name=P2RY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1401252	1401516	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=CHM13_chrY_T0000132;gene_id=CHM13_chrY_G0000033;Parent=CHM13_chrY_T0000132;transcript_name=CHM13_chrY_T0000132;gene_name=P2RY8;ID=exon:CHM13_chrY_T0000132:1;Name=P2RY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1329805	1358401	100	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=CHM13_chrY_T0000133;gene_id=CHM13_chrY_G0000033;Parent=CHM13_chrY_G0000033;transcript_name=CHM13_chrY_T0000133;gene_name=P2RY8;ID=CHM13_chrY_T0000133;Name=P2RY8
CHM13_chrY	CAT	exon	1329805	1329950	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=CHM13_chrY_T0000133;gene_id=CHM13_chrY_G0000033;Parent=CHM13_chrY_T0000133;transcript_name=CHM13_chrY_T0000133;gene_name=P2RY8;ID=exon:CHM13_chrY_T0000133:0;Name=P2RY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1329805	1329926	.	-	0	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=CHM13_chrY_T0000133;gene_id=CHM13_chrY_G0000033;Parent=CHM13_chrY_T0000133;transcript_name=CHM13_chrY_T0000133;gene_name=P2RY8;ID=CDS:CHM13_chrY_T0000133:0;Name=P2RY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1329924	1329926	.	-	0	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=CHM13_chrY_T0000133;gene_id=CHM13_chrY_G0000033;Parent=CHM13_chrY_T0000133;transcript_name=CHM13_chrY_T0000133;gene_name=P2RY8;ID=start_codon:CHM13_chrY_T0000133;Name=P2RY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1329951	1358140	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=CHM13_chrY_T0000133;gene_id=CHM13_chrY_G0000033;Parent=CHM13_chrY_T0000133;transcript_name=CHM13_chrY_T0000133;gene_name=P2RY8;ID=intron:CHM13_chrY_T0000133:0;Name=P2RY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1358141	1358401	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=CHM13_chrY_T0000133;gene_id=CHM13_chrY_G0000033;Parent=CHM13_chrY_T0000133;transcript_name=CHM13_chrY_T0000133;gene_name=P2RY8;ID=exon:CHM13_chrY_T0000133:1;Name=P2RY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1417062	1429330	.	-	.	source_gene_common_name=ENSG00000310546;source_gene=ENSG00000310546.1;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;gene_id=CHM13_chrY_G0000034;gene_biotype=lncRNA;gene_name=ENSG00000310546;gene_sources=liftoff;ID=CHM13_chrY_G0000034;Name=ENSG00000310546
CHM13_chrY	CAT	transcript	1417062	1429330	1000	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.86;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=CHM13_chrY_T0000134;gene_id=CHM13_chrY_G0000034;Parent=CHM13_chrY_G0000034;transcript_name=CHM13_chrY_T0000134;gene_name=ENSG00000310546;ID=CHM13_chrY_T0000134;Name=ENSG00000310546
CHM13_chrY	CAT	exon	1417062	1417675	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.86;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=CHM13_chrY_T0000134;gene_id=CHM13_chrY_G0000034;Parent=CHM13_chrY_T0000134;transcript_name=CHM13_chrY_T0000134;gene_name=ENSG00000310546;ID=exon:CHM13_chrY_T0000134:0;Name=ENSG00000310546;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1417676	1429228	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.86;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=CHM13_chrY_T0000134;gene_id=CHM13_chrY_G0000034;Parent=CHM13_chrY_T0000134;transcript_name=CHM13_chrY_T0000134;gene_name=ENSG00000310546;ID=intron:CHM13_chrY_T0000134:0;Name=ENSG00000310546;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1429229	1429330	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.86;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=CHM13_chrY_T0000134;gene_id=CHM13_chrY_G0000034;Parent=CHM13_chrY_T0000134;transcript_name=CHM13_chrY_T0000134;gene_name=ENSG00000310546;ID=exon:CHM13_chrY_T0000134:1;Name=ENSG00000310546;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1455997	1466654	.	+	.	source_gene_common_name=AKAP17A;source_gene=ENSG00000292343.1;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;gene_id=CHM13_chrY_G0000035;gene_biotype=protein_coding;gene_name=AKAP17A;gene_sources=liftoff;ID=CHM13_chrY_G0000035;Name=AKAP17A
CHM13_chrY	CAT	transcript	1455997	1466654	100	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_G0000035;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=CHM13_chrY_T0000135;Name=AKAP17A
CHM13_chrY	CAT	exon	1455997	1456162	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000135:0;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1456163	1457836	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=intron:CHM13_chrY_T0000135:0;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1457837	1458617	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000135:1;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1457856	1458617	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=CDS:CHM13_chrY_T0000135:0;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1457856	1457858	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=start_codon:CHM13_chrY_T0000135;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1458618	1459769	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=intron:CHM13_chrY_T0000135:1;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1459770	1459918	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000135:2;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1459770	1459918	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=CDS:CHM13_chrY_T0000135:1;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1459919	1463325	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=intron:CHM13_chrY_T0000135:2;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1463326	1463566	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000135:3;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1463326	1463566	.	+	1	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=CDS:CHM13_chrY_T0000135:2;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1463567	1464792	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=intron:CHM13_chrY_T0000135:3;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1464793	1466654	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000135:4;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1464793	1465728	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=CDS:CHM13_chrY_T0000135:3;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1465726	1465728	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=CHM13_chrY_T0000135;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000135;transcript_name=CHM13_chrY_T0000135;gene_name=AKAP17A;ID=stop_codon:CHM13_chrY_T0000135;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1456016	1466636	1000	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_G0000035;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=CHM13_chrY_T0000136;Name=AKAP17A
CHM13_chrY	CAT	exon	1456016	1456162	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000136:0;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1456163	1457836	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=intron:CHM13_chrY_T0000136:0;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1457837	1458617	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000136:1;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1457856	1458617	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=CDS:CHM13_chrY_T0000136:0;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1457856	1457858	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=start_codon:CHM13_chrY_T0000136;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1458618	1459769	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=intron:CHM13_chrY_T0000136:1;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1459770	1459918	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000136:2;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1459770	1459918	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=CDS:CHM13_chrY_T0000136:1;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1459919	1463325	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=intron:CHM13_chrY_T0000136:2;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1463326	1463566	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000136:3;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1463326	1463566	.	+	1	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=CDS:CHM13_chrY_T0000136:2;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1463567	1464271	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=intron:CHM13_chrY_T0000136:3;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1464272	1464341	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000136:4;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1464272	1464277	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=CDS:CHM13_chrY_T0000136:3;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1464275	1464277	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=stop_codon:CHM13_chrY_T0000136;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1464342	1464792	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=intron:CHM13_chrY_T0000136:4;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1464793	1466636	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.969;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=CHM13_chrY_T0000136;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000136;transcript_name=CHM13_chrY_T0000136;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000136:5;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1456018	1464437	100	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=CHM13_chrY_T0000137;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_G0000035;transcript_name=CHM13_chrY_T0000137;gene_name=AKAP17A;ID=CHM13_chrY_T0000137;Name=AKAP17A
CHM13_chrY	CAT	exon	1456018	1456162	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=CHM13_chrY_T0000137;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000137;transcript_name=CHM13_chrY_T0000137;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000137:0;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1456163	1457836	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=CHM13_chrY_T0000137;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000137;transcript_name=CHM13_chrY_T0000137;gene_name=AKAP17A;ID=intron:CHM13_chrY_T0000137:0;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1457837	1458617	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=CHM13_chrY_T0000137;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000137;transcript_name=CHM13_chrY_T0000137;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000137:1;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1457856	1458617	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=CHM13_chrY_T0000137;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000137;transcript_name=CHM13_chrY_T0000137;gene_name=AKAP17A;ID=CDS:CHM13_chrY_T0000137:0;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1457856	1457858	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=CHM13_chrY_T0000137;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000137;transcript_name=CHM13_chrY_T0000137;gene_name=AKAP17A;ID=start_codon:CHM13_chrY_T0000137;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1458618	1459769	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=CHM13_chrY_T0000137;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000137;transcript_name=CHM13_chrY_T0000137;gene_name=AKAP17A;ID=intron:CHM13_chrY_T0000137:1;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1459770	1459918	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=CHM13_chrY_T0000137;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000137;transcript_name=CHM13_chrY_T0000137;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000137:2;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1459770	1459918	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=CHM13_chrY_T0000137;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000137;transcript_name=CHM13_chrY_T0000137;gene_name=AKAP17A;ID=CDS:CHM13_chrY_T0000137:1;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1459919	1463325	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=CHM13_chrY_T0000137;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000137;transcript_name=CHM13_chrY_T0000137;gene_name=AKAP17A;ID=intron:CHM13_chrY_T0000137:2;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1463326	1464437	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=CHM13_chrY_T0000137;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000137;transcript_name=CHM13_chrY_T0000137;gene_name=AKAP17A;ID=exon:CHM13_chrY_T0000137:3;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1463326	1463755	.	+	1	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=CHM13_chrY_T0000137;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000137;transcript_name=CHM13_chrY_T0000137;gene_name=AKAP17A;ID=CDS:CHM13_chrY_T0000137:2;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1463753	1463755	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=CHM13_chrY_T0000137;gene_id=CHM13_chrY_G0000035;Parent=CHM13_chrY_T0000137;transcript_name=CHM13_chrY_T0000137;gene_name=AKAP17A;ID=stop_codon:CHM13_chrY_T0000137;Name=AKAP17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1478823	1502882	.	+	.	source_gene_common_name=ASMT;source_gene=ENSG00000292336.1;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;gene_id=CHM13_chrY_G0000036;gene_biotype=protein_coding;gene_name=ASMT;gene_sources=liftoff;ID=CHM13_chrY_G0000036;Name=ASMT
CHM13_chrY	CAT	transcript	1478823	1502882	100	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_G0000036;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=CHM13_chrY_T0000138;Name=ASMT
CHM13_chrY	CAT	exon	1478823	1479032	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=exon:CHM13_chrY_T0000138:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1478964	1479032	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000138:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1478964	1478966	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=start_codon:CHM13_chrY_T0000138;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1479033	1486902	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=intron:CHM13_chrY_T0000138:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1486903	1487077	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=exon:CHM13_chrY_T0000138:1;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1486903	1487077	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000138:1;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1487078	1488032	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=intron:CHM13_chrY_T0000138:1;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1488033	1488162	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=exon:CHM13_chrY_T0000138:2;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1488033	1488162	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000138:2;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1488163	1491452	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=intron:CHM13_chrY_T0000138:2;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1491453	1491521	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=exon:CHM13_chrY_T0000138:3;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1491453	1491521	.	+	1	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000138:3;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1491522	1493571	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=intron:CHM13_chrY_T0000138:3;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1493572	1493690	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=exon:CHM13_chrY_T0000138:4;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1493572	1493690	.	+	1	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000138:4;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1493691	1496454	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=intron:CHM13_chrY_T0000138:4;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1496455	1496538	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=exon:CHM13_chrY_T0000138:5;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1496455	1496538	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000138:5;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1496539	1496900	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=intron:CHM13_chrY_T0000138:5;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1496901	1497041	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=exon:CHM13_chrY_T0000138:6;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1496901	1497041	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000138:6;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1497042	1500189	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=intron:CHM13_chrY_T0000138:6;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1500190	1500312	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=exon:CHM13_chrY_T0000138:7;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1500190	1500312	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000138:7;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1500313	1502603	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=intron:CHM13_chrY_T0000138:7;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1502604	1502882	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=exon:CHM13_chrY_T0000138:8;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1502604	1502815	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000138:8;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1502813	1502815	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=CHM13_chrY_T0000138;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000138;transcript_name=CHM13_chrY_T0000138;gene_name=ASMT;ID=stop_codon:CHM13_chrY_T0000138;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1478928	1502828	100	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_G0000036;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=CHM13_chrY_T0000139;Name=ASMT
CHM13_chrY	CAT	exon	1478928	1479032	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=exon:CHM13_chrY_T0000139:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1478964	1479032	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000139:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1478964	1478966	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=start_codon:CHM13_chrY_T0000139;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1479033	1486902	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=intron:CHM13_chrY_T0000139:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1486903	1487077	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=exon:CHM13_chrY_T0000139:1;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1486903	1487077	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000139:1;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1487078	1488032	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=intron:CHM13_chrY_T0000139:1;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1488033	1488162	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=exon:CHM13_chrY_T0000139:2;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1488033	1488162	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000139:2;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1488163	1491452	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=intron:CHM13_chrY_T0000139:2;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1491453	1491521	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=exon:CHM13_chrY_T0000139:3;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1491453	1491521	.	+	1	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000139:3;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1491522	1493571	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=intron:CHM13_chrY_T0000139:3;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1493572	1493690	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=exon:CHM13_chrY_T0000139:4;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1493572	1493690	.	+	1	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000139:4;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1493691	1496900	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=intron:CHM13_chrY_T0000139:4;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1496901	1497041	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=exon:CHM13_chrY_T0000139:5;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1496901	1497041	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000139:5;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1497042	1500189	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=intron:CHM13_chrY_T0000139:5;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1500190	1500312	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=exon:CHM13_chrY_T0000139:6;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1500190	1500312	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000139:6;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1500313	1502603	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=intron:CHM13_chrY_T0000139:6;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1502604	1502828	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=exon:CHM13_chrY_T0000139:7;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1502604	1502815	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000139:7;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1502813	1502815	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=CHM13_chrY_T0000139;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000139;transcript_name=CHM13_chrY_T0000139;gene_name=ASMT;ID=stop_codon:CHM13_chrY_T0000139;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1478939	1502882	100	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_G0000036;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=CHM13_chrY_T0000140;Name=ASMT
CHM13_chrY	CAT	exon	1478939	1479032	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=exon:CHM13_chrY_T0000140:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1478964	1479032	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000140:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1478964	1478966	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=start_codon:CHM13_chrY_T0000140;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1479033	1486902	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=intron:CHM13_chrY_T0000140:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1486903	1487077	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=exon:CHM13_chrY_T0000140:1;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1486903	1487077	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000140:1;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1487078	1488032	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=intron:CHM13_chrY_T0000140:1;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1488033	1488162	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=exon:CHM13_chrY_T0000140:2;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1488033	1488162	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000140:2;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1488163	1491452	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=intron:CHM13_chrY_T0000140:2;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1491453	1491521	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=exon:CHM13_chrY_T0000140:3;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1491453	1491521	.	+	1	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000140:3;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1491522	1493571	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=intron:CHM13_chrY_T0000140:3;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1493572	1493690	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=exon:CHM13_chrY_T0000140:4;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1493572	1493690	.	+	1	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000140:4;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1493691	1500189	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=intron:CHM13_chrY_T0000140:4;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1500190	1500312	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=exon:CHM13_chrY_T0000140:5;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1500190	1500312	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000140:5;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1500313	1502603	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=intron:CHM13_chrY_T0000140:5;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1502604	1502882	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=exon:CHM13_chrY_T0000140:6;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1502604	1502815	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000140:6;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1502813	1502815	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=CHM13_chrY_T0000140;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000140;transcript_name=CHM13_chrY_T0000140;gene_name=ASMT;ID=stop_codon:CHM13_chrY_T0000140;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1491496	1500215	1000	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=299.608;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=CHM13_chrY_T0000141;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_G0000036;transcript_name=CHM13_chrY_T0000141;gene_name=ASMT;ID=CHM13_chrY_T0000141;Name=ASMT
CHM13_chrY	CAT	exon	1491496	1491783	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=299.608;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=CHM13_chrY_T0000141;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000141;transcript_name=CHM13_chrY_T0000141;gene_name=ASMT;ID=exon:CHM13_chrY_T0000141:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1491784	1499993	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=299.608;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=CHM13_chrY_T0000141;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000141;transcript_name=CHM13_chrY_T0000141;gene_name=ASMT;ID=intron:CHM13_chrY_T0000141:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1499994	1500215	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=299.608;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=CHM13_chrY_T0000141;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000141;transcript_name=CHM13_chrY_T0000141;gene_name=ASMT;ID=exon:CHM13_chrY_T0000141:1;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1500150	1502882	100	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=CHM13_chrY_T0000142;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_G0000036;transcript_name=CHM13_chrY_T0000142;gene_name=ASMT;ID=CHM13_chrY_T0000142;Name=ASMT
CHM13_chrY	CAT	exon	1500150	1500312	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=CHM13_chrY_T0000142;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000142;transcript_name=CHM13_chrY_T0000142;gene_name=ASMT;ID=exon:CHM13_chrY_T0000142:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1500150	1500312	.	+	0	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=CHM13_chrY_T0000142;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000142;transcript_name=CHM13_chrY_T0000142;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000142:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1500313	1502603	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=CHM13_chrY_T0000142;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000142;transcript_name=CHM13_chrY_T0000142;gene_name=ASMT;ID=intron:CHM13_chrY_T0000142:0;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1502604	1502882	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=CHM13_chrY_T0000142;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000142;transcript_name=CHM13_chrY_T0000142;gene_name=ASMT;ID=exon:CHM13_chrY_T0000142:1;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1502604	1502815	.	+	2	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=CHM13_chrY_T0000142;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000142;transcript_name=CHM13_chrY_T0000142;gene_name=ASMT;ID=CDS:CHM13_chrY_T0000142:1;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1502813	1502815	.	+	0	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=CHM13_chrY_T0000142;gene_id=CHM13_chrY_G0000036;Parent=CHM13_chrY_T0000142;transcript_name=CHM13_chrY_T0000142;gene_name=ASMT;ID=stop_codon:CHM13_chrY_T0000142;Name=ASMT;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1517737	1623378	.	+	.	source_gene_common_name=LINC02968;source_gene=ENSG00000310540.2;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;gene_id=CHM13_chrY_G0000037;gene_biotype=lncRNA;gene_name=LINC02968;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000037;Name=LINC02968
CHM13_chrY	CAT	transcript	1517737	1590750	1000	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=CHM13_chrY_T0000143;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000143;gene_name=LINC02968;ID=CHM13_chrY_T0000143;Name=LINC02968
CHM13_chrY	CAT	exon	1517737	1517873	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=CHM13_chrY_T0000143;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000143;transcript_name=CHM13_chrY_T0000143;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000143:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1517874	1585765	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=CHM13_chrY_T0000143;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000143;transcript_name=CHM13_chrY_T0000143;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000143:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1585766	1585853	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=CHM13_chrY_T0000143;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000143;transcript_name=CHM13_chrY_T0000143;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000143:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1585854	1590584	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=CHM13_chrY_T0000143;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000143;transcript_name=CHM13_chrY_T0000143;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000143:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1590585	1590750	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=CHM13_chrY_T0000143;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000143;transcript_name=CHM13_chrY_T0000143;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000143:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1517742	1611521	1000	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=299.757;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=CHM13_chrY_T0000144;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000144;gene_name=LINC02968;ID=CHM13_chrY_T0000144;Name=LINC02968
CHM13_chrY	CAT	exon	1517742	1517873	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=299.757;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=CHM13_chrY_T0000144;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000144;transcript_name=CHM13_chrY_T0000144;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000144:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1517874	1585765	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=299.757;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=CHM13_chrY_T0000144;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000144;transcript_name=CHM13_chrY_T0000144;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000144:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1585766	1585853	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=299.757;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=CHM13_chrY_T0000144;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000144;transcript_name=CHM13_chrY_T0000144;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000144:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1585854	1611329	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=299.757;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=CHM13_chrY_T0000144;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000144;transcript_name=CHM13_chrY_T0000144;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000144:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1611330	1611521	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=299.757;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=CHM13_chrY_T0000144;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000144;transcript_name=CHM13_chrY_T0000144;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000144:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1517742	1518440	1000	+	.	source_transcript=ENST00000850749.1;source_transcript_name=LINC02968-245;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850749.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850749.1;transcript_score=199.285;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850749.1,ENST00000850749.1;transcript_id=CHM13_chrY_T0000145;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000145;gene_name=LINC02968;ID=CHM13_chrY_T0000145;Name=LINC02968
CHM13_chrY	CAT	exon	1517742	1518440	.	+	.	source_transcript=ENST00000850749.1;source_transcript_name=LINC02968-245;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850749.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850749.1;transcript_score=199.285;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850749.1,ENST00000850749.1;transcript_id=CHM13_chrY_T0000145;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000145;transcript_name=CHM13_chrY_T0000145;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000145:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1517744	1520917	1000	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=299.43;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=CHM13_chrY_T0000146;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000146;gene_name=LINC02968;ID=CHM13_chrY_T0000146;Name=LINC02968
CHM13_chrY	CAT	exon	1517744	1517873	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=299.43;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=CHM13_chrY_T0000146;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000146;transcript_name=CHM13_chrY_T0000146;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000146:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1517874	1520150	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=299.43;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=CHM13_chrY_T0000146;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000146;transcript_name=CHM13_chrY_T0000146;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000146:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1520151	1520917	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=299.43;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=CHM13_chrY_T0000146;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000146;transcript_name=CHM13_chrY_T0000146;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000146:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1517745	1520914	1000	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=299.346;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=CHM13_chrY_T0000147;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000147;gene_name=LINC02968;ID=CHM13_chrY_T0000147;Name=LINC02968
CHM13_chrY	CAT	exon	1517745	1517873	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=299.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=CHM13_chrY_T0000147;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000147;transcript_name=CHM13_chrY_T0000147;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000147:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1517874	1520259	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=299.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=CHM13_chrY_T0000147;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000147;transcript_name=CHM13_chrY_T0000147;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000147:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1520260	1520914	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=299.346;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=CHM13_chrY_T0000147;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000147;transcript_name=CHM13_chrY_T0000147;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000147:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1517747	1615893	1000	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=CHM13_chrY_T0000148;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000148;gene_name=LINC02968;ID=CHM13_chrY_T0000148;Name=LINC02968
CHM13_chrY	CAT	exon	1517747	1517873	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=CHM13_chrY_T0000148;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000148;transcript_name=CHM13_chrY_T0000148;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000148:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1517874	1585765	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=CHM13_chrY_T0000148;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000148;transcript_name=CHM13_chrY_T0000148;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000148:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1585766	1585853	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=CHM13_chrY_T0000148;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000148;transcript_name=CHM13_chrY_T0000148;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000148:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1585854	1611329	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=CHM13_chrY_T0000148;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000148;transcript_name=CHM13_chrY_T0000148;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000148:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1611330	1611389	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=CHM13_chrY_T0000148;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000148;transcript_name=CHM13_chrY_T0000148;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000148:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1611390	1615728	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=CHM13_chrY_T0000148;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000148;transcript_name=CHM13_chrY_T0000148;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000148:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1615729	1615893	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=CHM13_chrY_T0000148;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000148;transcript_name=CHM13_chrY_T0000148;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000148:3;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1517748	1522444	1000	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=CHM13_chrY_T0000149;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000149;gene_name=LINC02968;ID=CHM13_chrY_T0000149;Name=LINC02968
CHM13_chrY	CAT	exon	1517748	1517873	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=CHM13_chrY_T0000149;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000149;transcript_name=CHM13_chrY_T0000149;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000149:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1517874	1522298	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=CHM13_chrY_T0000149;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000149;transcript_name=CHM13_chrY_T0000149;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000149:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1522299	1522444	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=CHM13_chrY_T0000149;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000149;transcript_name=CHM13_chrY_T0000149;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000149:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1517762	1520869	1000	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;transcript_id=CHM13_chrY_T0000150;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000150;gene_name=LINC02968;ID=CHM13_chrY_T0000150;Name=LINC02968
CHM13_chrY	CAT	exon	1517762	1517873	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;transcript_id=CHM13_chrY_T0000150;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000150;transcript_name=CHM13_chrY_T0000150;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000150:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1517874	1520262	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;transcript_id=CHM13_chrY_T0000150;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000150;transcript_name=CHM13_chrY_T0000150;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000150:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1520263	1520869	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;transcript_id=CHM13_chrY_T0000150;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000150;transcript_name=CHM13_chrY_T0000150;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000150:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1517762	1520889	1000	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1;transcript_id=CHM13_chrY_T0000151;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000151;gene_name=LINC02968;ID=CHM13_chrY_T0000151;Name=LINC02968
CHM13_chrY	CAT	exon	1517762	1517873	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1;transcript_id=CHM13_chrY_T0000151;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000151;transcript_name=CHM13_chrY_T0000151;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000151:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1517874	1520262	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1;transcript_id=CHM13_chrY_T0000151;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000151;transcript_name=CHM13_chrY_T0000151;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000151:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1520263	1520889	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=299.444;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1;transcript_id=CHM13_chrY_T0000151;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000151;transcript_name=CHM13_chrY_T0000151;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000151:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1517764	1537831	1000	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=CHM13_chrY_T0000152;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000152;gene_name=LINC02968;ID=CHM13_chrY_T0000152;Name=LINC02968
CHM13_chrY	CAT	exon	1517764	1517873	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=CHM13_chrY_T0000152;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000152;transcript_name=CHM13_chrY_T0000152;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000152:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1517874	1522298	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=CHM13_chrY_T0000152;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000152;transcript_name=CHM13_chrY_T0000152;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000152:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1522299	1522409	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=CHM13_chrY_T0000152;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000152;transcript_name=CHM13_chrY_T0000152;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000152:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1522410	1537638	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=CHM13_chrY_T0000152;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000152;transcript_name=CHM13_chrY_T0000152;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000152:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1537639	1537831	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=CHM13_chrY_T0000152;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000152;transcript_name=CHM13_chrY_T0000152;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000152:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1517764	1522605	1000	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.595;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=CHM13_chrY_T0000153;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000153;gene_name=LINC02968;ID=CHM13_chrY_T0000153;Name=LINC02968
CHM13_chrY	CAT	exon	1517764	1517873	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.595;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=CHM13_chrY_T0000153;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000153;transcript_name=CHM13_chrY_T0000153;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000153:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1517874	1521867	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.595;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=CHM13_chrY_T0000153;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000153;transcript_name=CHM13_chrY_T0000153;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000153:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1521868	1522190	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.595;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=CHM13_chrY_T0000153;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000153;transcript_name=CHM13_chrY_T0000153;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000153:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1522191	1522298	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.595;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=CHM13_chrY_T0000153;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000153;transcript_name=CHM13_chrY_T0000153;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000153:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1522299	1522605	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=299.595;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=CHM13_chrY_T0000153;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000153;transcript_name=CHM13_chrY_T0000153;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000153:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1517778	1524630	1000	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=CHM13_chrY_T0000154;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000154;gene_name=LINC02968;ID=CHM13_chrY_T0000154;Name=LINC02968
CHM13_chrY	CAT	exon	1517778	1517873	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=CHM13_chrY_T0000154;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000154;transcript_name=CHM13_chrY_T0000154;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000154:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1517874	1522298	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=CHM13_chrY_T0000154;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000154;transcript_name=CHM13_chrY_T0000154;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000154:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1522299	1522409	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=CHM13_chrY_T0000154;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000154;transcript_name=CHM13_chrY_T0000154;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000154:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1522410	1524336	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=CHM13_chrY_T0000154;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000154;transcript_name=CHM13_chrY_T0000154;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000154:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1524337	1524630	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=CHM13_chrY_T0000154;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000154;transcript_name=CHM13_chrY_T0000154;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000154:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1517805	1623378	1000	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=CHM13_chrY_T0000155;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000155;gene_name=LINC02968;ID=CHM13_chrY_T0000155;Name=LINC02968
CHM13_chrY	CAT	exon	1517805	1517873	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=CHM13_chrY_T0000155;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000155;transcript_name=CHM13_chrY_T0000155;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000155:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1517874	1585765	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=CHM13_chrY_T0000155;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000155;transcript_name=CHM13_chrY_T0000155;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000155:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1585766	1585853	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=CHM13_chrY_T0000155;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000155;transcript_name=CHM13_chrY_T0000155;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000155:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1585854	1615728	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=CHM13_chrY_T0000155;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000155;transcript_name=CHM13_chrY_T0000155;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000155:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1615729	1616030	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=CHM13_chrY_T0000155;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000155;transcript_name=CHM13_chrY_T0000155;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000155:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1616031	1623024	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=CHM13_chrY_T0000155;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000155;transcript_name=CHM13_chrY_T0000155;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000155:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1623025	1623378	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=CHM13_chrY_T0000155;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000155;transcript_name=CHM13_chrY_T0000155;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000155:3;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1521933	1590751	1000	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=299.41200000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=CHM13_chrY_T0000156;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000156;gene_name=LINC02968;ID=CHM13_chrY_T0000156;Name=LINC02968
CHM13_chrY	CAT	exon	1521933	1522190	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=299.41200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=CHM13_chrY_T0000156;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000156;transcript_name=CHM13_chrY_T0000156;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000156:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1522191	1585765	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=299.41200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=CHM13_chrY_T0000156;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000156;transcript_name=CHM13_chrY_T0000156;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000156:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1585766	1585853	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=299.41200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=CHM13_chrY_T0000156;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000156;transcript_name=CHM13_chrY_T0000156;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000156:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1585854	1590584	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=299.41200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=CHM13_chrY_T0000156;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000156;transcript_name=CHM13_chrY_T0000156;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000156:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1590585	1590751	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=299.41200000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=CHM13_chrY_T0000156;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000156;transcript_name=CHM13_chrY_T0000156;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000156:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1521933	1590749	1000	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=CHM13_chrY_T0000157;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000157;gene_name=LINC02968;ID=CHM13_chrY_T0000157;Name=LINC02968
CHM13_chrY	CAT	exon	1521933	1522190	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=CHM13_chrY_T0000157;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000157;transcript_name=CHM13_chrY_T0000157;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000157:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1522191	1585765	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=CHM13_chrY_T0000157;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000157;transcript_name=CHM13_chrY_T0000157;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000157:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1585766	1585853	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=CHM13_chrY_T0000157;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000157;transcript_name=CHM13_chrY_T0000157;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000157:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1585854	1586018	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=CHM13_chrY_T0000157;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000157;transcript_name=CHM13_chrY_T0000157;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000157:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1586019	1586191	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=CHM13_chrY_T0000157;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000157;transcript_name=CHM13_chrY_T0000157;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000157:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1586192	1590584	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=CHM13_chrY_T0000157;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000157;transcript_name=CHM13_chrY_T0000157;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000157:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1590585	1590749	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=299.55899999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=CHM13_chrY_T0000157;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000157;transcript_name=CHM13_chrY_T0000157;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000157:3;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1521933	1522444	1000	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.257;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=CHM13_chrY_T0000158;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000158;gene_name=LINC02968;ID=CHM13_chrY_T0000158;Name=LINC02968
CHM13_chrY	CAT	exon	1521933	1522190	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.257;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=CHM13_chrY_T0000158;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000158;transcript_name=CHM13_chrY_T0000158;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000158:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1522191	1522298	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.257;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=CHM13_chrY_T0000158;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000158;transcript_name=CHM13_chrY_T0000158;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000158:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1522299	1522444	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=299.257;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=CHM13_chrY_T0000158;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000158;transcript_name=CHM13_chrY_T0000158;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000158:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1521944	1586232	1000	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=299.454;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=CHM13_chrY_T0000159;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000159;gene_name=LINC02968;ID=CHM13_chrY_T0000159;Name=LINC02968
CHM13_chrY	CAT	exon	1521944	1522190	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=299.454;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=CHM13_chrY_T0000159;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000159;transcript_name=CHM13_chrY_T0000159;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000159:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1522191	1585765	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=299.454;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=CHM13_chrY_T0000159;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000159;transcript_name=CHM13_chrY_T0000159;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000159:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1585766	1585853	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=299.454;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=CHM13_chrY_T0000159;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000159;transcript_name=CHM13_chrY_T0000159;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000159:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1585854	1586018	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=299.454;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=CHM13_chrY_T0000159;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000159;transcript_name=CHM13_chrY_T0000159;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000159:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1586019	1586232	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=299.454;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=CHM13_chrY_T0000159;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000159;transcript_name=CHM13_chrY_T0000159;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000159:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1521961	1611520	1000	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=299.214;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=CHM13_chrY_T0000160;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000160;gene_name=LINC02968;ID=CHM13_chrY_T0000160;Name=LINC02968
CHM13_chrY	CAT	exon	1521961	1522190	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=299.214;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=CHM13_chrY_T0000160;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000160;transcript_name=CHM13_chrY_T0000160;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000160:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1522191	1585765	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=299.214;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=CHM13_chrY_T0000160;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000160;transcript_name=CHM13_chrY_T0000160;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000160:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1585766	1585853	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=299.214;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=CHM13_chrY_T0000160;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000160;transcript_name=CHM13_chrY_T0000160;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000160:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1585854	1611329	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=299.214;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=CHM13_chrY_T0000160;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000160;transcript_name=CHM13_chrY_T0000160;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000160:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1611330	1611520	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=299.214;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=CHM13_chrY_T0000160;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000160;transcript_name=CHM13_chrY_T0000160;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000160:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1521984	1615975	1000	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=CHM13_chrY_T0000161;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000161;gene_name=LINC02968;ID=CHM13_chrY_T0000161;Name=LINC02968
CHM13_chrY	CAT	exon	1521984	1522190	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=CHM13_chrY_T0000161;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000161;transcript_name=CHM13_chrY_T0000161;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000161:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1522191	1585765	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=CHM13_chrY_T0000161;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000161;transcript_name=CHM13_chrY_T0000161;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000161:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1585766	1585853	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=CHM13_chrY_T0000161;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000161;transcript_name=CHM13_chrY_T0000161;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000161:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1585854	1611329	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=CHM13_chrY_T0000161;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000161;transcript_name=CHM13_chrY_T0000161;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000161:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1611330	1611389	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=CHM13_chrY_T0000161;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000161;transcript_name=CHM13_chrY_T0000161;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000161:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1611390	1615728	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=CHM13_chrY_T0000161;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000161;transcript_name=CHM13_chrY_T0000161;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000161:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1615729	1615975	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=299.502;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=CHM13_chrY_T0000161;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000161;transcript_name=CHM13_chrY_T0000161;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000161:3;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1521984	1590749	1000	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=299.395;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=CHM13_chrY_T0000162;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000162;gene_name=LINC02968;ID=CHM13_chrY_T0000162;Name=LINC02968
CHM13_chrY	CAT	exon	1521984	1522229	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=299.395;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=CHM13_chrY_T0000162;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000162;transcript_name=CHM13_chrY_T0000162;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000162:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1522230	1585765	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=299.395;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=CHM13_chrY_T0000162;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000162;transcript_name=CHM13_chrY_T0000162;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000162:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1585766	1585853	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=299.395;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=CHM13_chrY_T0000162;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000162;transcript_name=CHM13_chrY_T0000162;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000162:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1585854	1590584	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=299.395;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=CHM13_chrY_T0000162;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000162;transcript_name=CHM13_chrY_T0000162;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000162:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1590585	1590749	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=299.395;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=CHM13_chrY_T0000162;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000162;transcript_name=CHM13_chrY_T0000162;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000162:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1521986	1611519	1000	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=CHM13_chrY_T0000163;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000163;gene_name=LINC02968;ID=CHM13_chrY_T0000163;Name=LINC02968
CHM13_chrY	CAT	exon	1521986	1522190	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=CHM13_chrY_T0000163;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000163;transcript_name=CHM13_chrY_T0000163;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000163:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1522191	1585765	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=CHM13_chrY_T0000163;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000163;transcript_name=CHM13_chrY_T0000163;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000163:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1585766	1585853	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=CHM13_chrY_T0000163;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000163;transcript_name=CHM13_chrY_T0000163;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000163:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1585854	1601975	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=CHM13_chrY_T0000163;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000163;transcript_name=CHM13_chrY_T0000163;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000163:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1601976	1602071	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=CHM13_chrY_T0000163;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000163;transcript_name=CHM13_chrY_T0000163;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000163:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1602072	1611329	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=CHM13_chrY_T0000163;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000163;transcript_name=CHM13_chrY_T0000163;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000163:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1611330	1611519	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=299.13599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=CHM13_chrY_T0000163;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000163;transcript_name=CHM13_chrY_T0000163;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000163:3;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1592279	1602033	1000	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.551;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=CHM13_chrY_T0000164;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000164;gene_name=LINC02968;ID=CHM13_chrY_T0000164;Name=LINC02968
CHM13_chrY	CAT	exon	1592279	1592418	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.551;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=CHM13_chrY_T0000164;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000164;transcript_name=CHM13_chrY_T0000164;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000164:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1592419	1593645	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.551;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=CHM13_chrY_T0000164;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000164;transcript_name=CHM13_chrY_T0000164;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000164:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1593646	1593892	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.551;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=CHM13_chrY_T0000164;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000164;transcript_name=CHM13_chrY_T0000164;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000164:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1593893	1601975	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.551;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=CHM13_chrY_T0000164;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000164;transcript_name=CHM13_chrY_T0000164;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000164:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1601976	1602033	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.551;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=CHM13_chrY_T0000164;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000164;transcript_name=CHM13_chrY_T0000164;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000164:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1593813	1623278	1000	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=CHM13_chrY_T0000165;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000165;gene_name=LINC02968;ID=CHM13_chrY_T0000165;Name=LINC02968
CHM13_chrY	CAT	exon	1593813	1593892	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=CHM13_chrY_T0000165;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000165;transcript_name=CHM13_chrY_T0000165;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000165:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1593893	1615728	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=CHM13_chrY_T0000165;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000165;transcript_name=CHM13_chrY_T0000165;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000165:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1615729	1616030	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=CHM13_chrY_T0000165;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000165;transcript_name=CHM13_chrY_T0000165;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000165:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1616031	1623024	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=CHM13_chrY_T0000165;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000165;transcript_name=CHM13_chrY_T0000165;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000165:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1623025	1623278	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=CHM13_chrY_T0000165;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000165;transcript_name=CHM13_chrY_T0000165;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000165:2;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1610700	1611867	1000	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.716;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=CHM13_chrY_T0000166;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000166;gene_name=LINC02968;ID=CHM13_chrY_T0000166;Name=LINC02968
CHM13_chrY	CAT	exon	1610700	1610865	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.716;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=CHM13_chrY_T0000166;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000166;transcript_name=CHM13_chrY_T0000166;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000166:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1610866	1611329	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.716;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=CHM13_chrY_T0000166;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000166;transcript_name=CHM13_chrY_T0000166;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000166:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1611330	1611867	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.716;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=CHM13_chrY_T0000166;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000166;transcript_name=CHM13_chrY_T0000166;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000166:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1611147	1615974	1000	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=CHM13_chrY_T0000167;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_G0000037;transcript_name=CHM13_chrY_T0000167;gene_name=LINC02968;ID=CHM13_chrY_T0000167;Name=LINC02968
CHM13_chrY	CAT	exon	1611147	1611225	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=CHM13_chrY_T0000167;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000167;transcript_name=CHM13_chrY_T0000167;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000167:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1611226	1615728	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=CHM13_chrY_T0000167;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000167;transcript_name=CHM13_chrY_T0000167;gene_name=LINC02968;ID=intron:CHM13_chrY_T0000167:0;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1615729	1615974	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=CHM13_chrY_T0000167;gene_id=CHM13_chrY_G0000037;Parent=CHM13_chrY_T0000167;transcript_name=CHM13_chrY_T0000167;gene_name=LINC02968;ID=exon:CHM13_chrY_T0000167:1;Name=LINC02968;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1626513	1627948	.	+	.	source_gene_common_name=ENSG00000292330;source_gene=ENSG00000292330.1;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;gene_id=CHM13_chrY_G0000038;gene_biotype=lncRNA;gene_name=ENSG00000292330;gene_sources=liftoff;ID=CHM13_chrY_G0000038;Name=ENSG00000292330
CHM13_chrY	CAT	transcript	1626513	1627948	1000	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=CHM13_chrY_T0000168;gene_id=CHM13_chrY_G0000038;Parent=CHM13_chrY_G0000038;transcript_name=CHM13_chrY_T0000168;gene_name=ENSG00000292330;ID=CHM13_chrY_T0000168;Name=ENSG00000292330
CHM13_chrY	CAT	exon	1626513	1626718	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=CHM13_chrY_T0000168;gene_id=CHM13_chrY_G0000038;Parent=CHM13_chrY_T0000168;transcript_name=CHM13_chrY_T0000168;gene_name=ENSG00000292330;ID=exon:CHM13_chrY_T0000168:0;Name=ENSG00000292330;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1626719	1627604	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=CHM13_chrY_T0000168;gene_id=CHM13_chrY_G0000038;Parent=CHM13_chrY_T0000168;transcript_name=CHM13_chrY_T0000168;gene_name=ENSG00000292330;ID=intron:CHM13_chrY_T0000168:0;Name=ENSG00000292330;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1627605	1627948	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=CHM13_chrY_T0000168;gene_id=CHM13_chrY_G0000038;Parent=CHM13_chrY_T0000168;transcript_name=CHM13_chrY_T0000168;gene_name=ENSG00000292330;ID=exon:CHM13_chrY_T0000168:1;Name=ENSG00000292330;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1742723	1753951	.	+	.	source_gene_common_name=ENSG00000310547;source_gene=ENSG00000310547.1;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;gene_id=CHM13_chrY_G0000039;gene_biotype=lncRNA;gene_name=ENSG00000310547;gene_sources=liftoff;ID=CHM13_chrY_G0000039;Name=ENSG00000310547
CHM13_chrY	CAT	transcript	1742723	1753951	1000	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=CHM13_chrY_T0000169;gene_id=CHM13_chrY_G0000039;Parent=CHM13_chrY_G0000039;transcript_name=CHM13_chrY_T0000169;gene_name=ENSG00000310547;ID=CHM13_chrY_T0000169;Name=ENSG00000310547
CHM13_chrY	CAT	exon	1742723	1742913	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=CHM13_chrY_T0000169;gene_id=CHM13_chrY_G0000039;Parent=CHM13_chrY_T0000169;transcript_name=CHM13_chrY_T0000169;gene_name=ENSG00000310547;ID=exon:CHM13_chrY_T0000169:0;Name=ENSG00000310547;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1742914	1752706	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=CHM13_chrY_T0000169;gene_id=CHM13_chrY_G0000039;Parent=CHM13_chrY_T0000169;transcript_name=CHM13_chrY_T0000169;gene_name=ENSG00000310547;ID=intron:CHM13_chrY_T0000169:0;Name=ENSG00000310547;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1752707	1752816	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=CHM13_chrY_T0000169;gene_id=CHM13_chrY_G0000039;Parent=CHM13_chrY_T0000169;transcript_name=CHM13_chrY_T0000169;gene_name=ENSG00000310547;ID=exon:CHM13_chrY_T0000169:1;Name=ENSG00000310547;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1752817	1753266	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=CHM13_chrY_T0000169;gene_id=CHM13_chrY_G0000039;Parent=CHM13_chrY_T0000169;transcript_name=CHM13_chrY_T0000169;gene_name=ENSG00000310547;ID=intron:CHM13_chrY_T0000169:1;Name=ENSG00000310547;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1753267	1753951	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.971;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=CHM13_chrY_T0000169;gene_id=CHM13_chrY_G0000039;Parent=CHM13_chrY_T0000169;transcript_name=CHM13_chrY_T0000169;gene_name=ENSG00000310547;ID=exon:CHM13_chrY_T0000169:2;Name=ENSG00000310547;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	1894160	2179552	.	-	.	source_gene_common_name=DHRSX;source_gene=ENSG00000292338.1;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;gene_id=CHM13_chrY_G0000040;gene_biotype=protein_coding;gene_name=DHRSX;gene_sources=liftoff;ID=CHM13_chrY_G0000040;Name=DHRSX
CHM13_chrY	CAT	transcript	1894160	2177723	100	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_G0000040;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=CHM13_chrY_T0000170;Name=DHRSX
CHM13_chrY	CAT	exon	1894160	1895883	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000170:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1895695	1895883	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000170:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	1895695	1895697	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=stop_codon:CHM13_chrY_T0000170;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1895884	1918435	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000170:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1918436	1918643	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000170:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1918436	1918643	.	-	1	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000170:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1918644	1942167	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000170:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1942168	1942375	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000170:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1942168	1942375	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000170:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1942376	1962817	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000170:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1962818	1962919	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000170:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1962818	1962919	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000170:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1962920	2085462	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000170:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2085463	2085531	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000170:4;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2085463	2085531	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000170:4;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2085532	2101915	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000170:4;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2101916	2102023	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000170:5;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2101916	2102023	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000170:5;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2102024	2177563	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000170:5;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2177564	2177723	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000170:6;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2177564	2177672	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000170:6;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2177670	2177672	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=CHM13_chrY_T0000170;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000170;transcript_name=CHM13_chrY_T0000170;gene_name=DHRSX;ID=start_codon:CHM13_chrY_T0000170;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1918475	2177720	100	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_G0000040;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=CHM13_chrY_T0000171;Name=DHRSX
CHM13_chrY	CAT	exon	1918475	1918643	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000171:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1918475	1918643	.	-	1	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000171:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1918644	1942167	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000171:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1942168	1942375	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000171:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1942168	1942375	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000171:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1942376	1962817	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000171:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1962818	1962919	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000171:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1962818	1962919	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000171:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1962920	2101915	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000171:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2101916	2102023	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000171:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2101916	2102023	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000171:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2102024	2177563	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000171:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2177564	2177720	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000171:4;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2177564	2177672	.	-	0	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000171:4;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2177670	2177672	.	-	0	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=CHM13_chrY_T0000171;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000171;transcript_name=CHM13_chrY_T0000171;gene_name=DHRSX;ID=start_codon:CHM13_chrY_T0000171;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1936745	1942365	1000	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.476;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=CHM13_chrY_T0000172;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_G0000040;transcript_name=CHM13_chrY_T0000172;gene_name=DHRSX;ID=CHM13_chrY_T0000172;Name=DHRSX
CHM13_chrY	CAT	exon	1936745	1937118	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=CHM13_chrY_T0000172;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000172;transcript_name=CHM13_chrY_T0000172;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000172:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1937119	1942167	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=CHM13_chrY_T0000172;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000172;transcript_name=CHM13_chrY_T0000172;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000172:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1942168	1942365	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.476;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=CHM13_chrY_T0000172;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000172;transcript_name=CHM13_chrY_T0000172;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000172:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1942198	2177398	100	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_G0000040;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=CHM13_chrY_T0000173;Name=DHRSX
CHM13_chrY	CAT	exon	1942198	1942375	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000173:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1942198	1942375	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000173:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1942376	1962817	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000173:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1962818	1962919	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000173:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1962818	1962919	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000173:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1962920	2085462	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000173:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2085463	2085531	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000173:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2085463	2085531	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000173:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2085532	2101915	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000173:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2101916	2102023	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000173:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2101916	2101931	.	-	0	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000173:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2101929	2101931	.	-	0	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=start_codon:CHM13_chrY_T0000173;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2102024	2177057	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000173:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2177058	2177398	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=CHM13_chrY_T0000173;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000173;transcript_name=CHM13_chrY_T0000173;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000173:4;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1942282	2179552	1000	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=CHM13_chrY_T0000174;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_G0000040;transcript_name=CHM13_chrY_T0000174;gene_name=DHRSX;ID=CHM13_chrY_T0000174;Name=DHRSX
CHM13_chrY	CAT	exon	1942282	1942375	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=CHM13_chrY_T0000174;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000174;transcript_name=CHM13_chrY_T0000174;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000174:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1942376	1962817	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=CHM13_chrY_T0000174;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000174;transcript_name=CHM13_chrY_T0000174;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000174:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	1962818	1962919	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=CHM13_chrY_T0000174;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000174;transcript_name=CHM13_chrY_T0000174;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000174:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1962920	2069011	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=CHM13_chrY_T0000174;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000174;transcript_name=CHM13_chrY_T0000174;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000174:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2069012	2069132	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=CHM13_chrY_T0000174;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000174;transcript_name=CHM13_chrY_T0000174;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000174:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2069133	2085462	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=CHM13_chrY_T0000174;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000174;transcript_name=CHM13_chrY_T0000174;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000174:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2085463	2085531	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=CHM13_chrY_T0000174;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000174;transcript_name=CHM13_chrY_T0000174;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000174:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2085532	2101915	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=CHM13_chrY_T0000174;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000174;transcript_name=CHM13_chrY_T0000174;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000174:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2101916	2102023	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=CHM13_chrY_T0000174;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000174;transcript_name=CHM13_chrY_T0000174;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000174:4;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2102024	2179507	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=CHM13_chrY_T0000174;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000174;transcript_name=CHM13_chrY_T0000174;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000174:4;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2179508	2179552	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=CHM13_chrY_T0000174;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000174;transcript_name=CHM13_chrY_T0000174;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000174:5;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	1962818	2177336	100	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=CHM13_chrY_T0000175;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_G0000040;transcript_name=CHM13_chrY_T0000175;gene_name=DHRSX;ID=CHM13_chrY_T0000175;Name=DHRSX
CHM13_chrY	CAT	exon	1962818	1962919	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=CHM13_chrY_T0000175;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000175;transcript_name=CHM13_chrY_T0000175;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000175:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	1962818	1962890	.	-	0	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=CHM13_chrY_T0000175;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000175;transcript_name=CHM13_chrY_T0000175;gene_name=DHRSX;ID=CDS:CHM13_chrY_T0000175:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	1962888	1962890	.	-	0	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=CHM13_chrY_T0000175;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000175;transcript_name=CHM13_chrY_T0000175;gene_name=DHRSX;ID=start_codon:CHM13_chrY_T0000175;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	1962920	2069011	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=CHM13_chrY_T0000175;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000175;transcript_name=CHM13_chrY_T0000175;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000175:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2069012	2069132	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=CHM13_chrY_T0000175;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000175;transcript_name=CHM13_chrY_T0000175;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000175:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2069133	2085462	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=CHM13_chrY_T0000175;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000175;transcript_name=CHM13_chrY_T0000175;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000175:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2085463	2085531	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=CHM13_chrY_T0000175;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000175;transcript_name=CHM13_chrY_T0000175;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000175:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2085532	2101915	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=CHM13_chrY_T0000175;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000175;transcript_name=CHM13_chrY_T0000175;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000175:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2101916	2102023	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=CHM13_chrY_T0000175;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000175;transcript_name=CHM13_chrY_T0000175;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000175:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2102024	2177057	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=CHM13_chrY_T0000175;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000175;transcript_name=CHM13_chrY_T0000175;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000175:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2177058	2177336	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=CHM13_chrY_T0000175;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000175;transcript_name=CHM13_chrY_T0000175;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000175:4;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2014489	2177707	1000	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=CHM13_chrY_T0000177;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_G0000040;transcript_name=CHM13_chrY_T0000177;gene_name=DHRSX;ID=CHM13_chrY_T0000177;Name=DHRSX
CHM13_chrY	CAT	exon	2014489	2014657	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=CHM13_chrY_T0000177;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000177;transcript_name=CHM13_chrY_T0000177;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000177:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2014658	2085462	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=CHM13_chrY_T0000177;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000177;transcript_name=CHM13_chrY_T0000177;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000177:0;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2085463	2085531	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=CHM13_chrY_T0000177;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000177;transcript_name=CHM13_chrY_T0000177;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000177:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2085532	2101915	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=CHM13_chrY_T0000177;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000177;transcript_name=CHM13_chrY_T0000177;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000177:1;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2101916	2102023	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=CHM13_chrY_T0000177;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000177;transcript_name=CHM13_chrY_T0000177;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000177:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2102024	2177563	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=CHM13_chrY_T0000177;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000177;transcript_name=CHM13_chrY_T0000177;gene_name=DHRSX;ID=intron:CHM13_chrY_T0000177:2;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2177564	2177707	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=CHM13_chrY_T0000177;gene_id=CHM13_chrY_G0000040;Parent=CHM13_chrY_T0000177;transcript_name=CHM13_chrY_T0000177;gene_name=DHRSX;ID=exon:CHM13_chrY_T0000177:3;Name=DHRSX;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2010956	2013072	.	-	.	source_gene_common_name=DHRSX-IT1;source_gene=ENSG00000292337.1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;gene_id=CHM13_chrY_G0000041;gene_biotype=lncRNA;gene_name=DHRSX-IT1;gene_sources=liftoff;ID=CHM13_chrY_G0000041;Name=DHRSX-IT1
CHM13_chrY	CAT	transcript	2010956	2013072	1000	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.693;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=CHM13_chrY_T0000176;gene_id=CHM13_chrY_G0000041;Parent=CHM13_chrY_G0000041;transcript_name=CHM13_chrY_T0000176;gene_name=DHRSX-IT1;ID=CHM13_chrY_T0000176;Name=DHRSX-IT1
CHM13_chrY	CAT	exon	2010956	2011580	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.693;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=CHM13_chrY_T0000176;gene_id=CHM13_chrY_G0000041;Parent=CHM13_chrY_T0000176;transcript_name=CHM13_chrY_T0000176;gene_name=DHRSX-IT1;ID=exon:CHM13_chrY_T0000176:0;Name=DHRSX-IT1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2011581	2013046	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.693;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=CHM13_chrY_T0000176;gene_id=CHM13_chrY_G0000041;Parent=CHM13_chrY_T0000176;transcript_name=CHM13_chrY_T0000176;gene_name=DHRSX-IT1;ID=intron:CHM13_chrY_T0000176:0;Name=DHRSX-IT1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2013047	2013072	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.693;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=CHM13_chrY_T0000176;gene_id=CHM13_chrY_G0000041;Parent=CHM13_chrY_T0000176;transcript_name=CHM13_chrY_T0000176;gene_name=DHRSX-IT1;ID=exon:CHM13_chrY_T0000176:1;Name=DHRSX-IT1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2049672	2049783	.	-	.	source_gene_common_name=ENSG00000310552;source_gene=ENSG00000310552.1;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;gene_id=CHM13_chrY_G0000042;gene_biotype=lncRNA;gene_name=ENSG00000310552;gene_sources=liftoff;ID=CHM13_chrY_G0000042;Name=ENSG00000310552
CHM13_chrY	CAT	transcript	2049672	2049783	1000	-	.	source_transcript=ENST00000850728.1;source_transcript_name=ENST00000850728;source_gene=ENSG00000310552.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310552.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850728.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310552;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;transcript_id=CHM13_chrY_T0000178;gene_id=CHM13_chrY_G0000042;Parent=CHM13_chrY_G0000042;transcript_name=CHM13_chrY_T0000178;gene_name=ENSG00000310552;ID=CHM13_chrY_T0000178;Name=ENSG00000310552
CHM13_chrY	CAT	exon	2049672	2049783	.	-	.	source_transcript=ENST00000850728.1;source_transcript_name=ENST00000850728;source_gene=ENSG00000310552.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310552.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850728.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310552;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;transcript_id=CHM13_chrY_T0000178;gene_id=CHM13_chrY_G0000042;Parent=CHM13_chrY_T0000178;transcript_name=CHM13_chrY_T0000178;gene_name=ENSG00000310552;ID=exon:CHM13_chrY_T0000178:0;Name=ENSG00000310552;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2163158	2177723	.	-	.	source_gene_common_name=ZBED1;source_gene=ENSG00000292345.1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;gene_id=CHM13_chrY_G0000043;gene_biotype=protein_coding;gene_name=ZBED1;gene_sources=liftoff;ID=CHM13_chrY_G0000043;Name=ZBED1
CHM13_chrY	CAT	transcript	2163158	2177714	100	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=CHM13_chrY_T0000179;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_G0000043;transcript_name=CHM13_chrY_T0000179;gene_name=ZBED1;ID=CHM13_chrY_T0000179;Name=ZBED1
CHM13_chrY	CAT	exon	2163158	2167516	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=CHM13_chrY_T0000179;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000179;transcript_name=CHM13_chrY_T0000179;gene_name=ZBED1;ID=exon:CHM13_chrY_T0000179:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2165379	2167463	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=CHM13_chrY_T0000179;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000179;transcript_name=CHM13_chrY_T0000179;gene_name=ZBED1;ID=CDS:CHM13_chrY_T0000179:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2165379	2165381	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=CHM13_chrY_T0000179;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000179;transcript_name=CHM13_chrY_T0000179;gene_name=ZBED1;ID=stop_codon:CHM13_chrY_T0000179;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2167461	2167463	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=CHM13_chrY_T0000179;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000179;transcript_name=CHM13_chrY_T0000179;gene_name=ZBED1;ID=start_codon:CHM13_chrY_T0000179;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2167517	2177563	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=CHM13_chrY_T0000179;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000179;transcript_name=CHM13_chrY_T0000179;gene_name=ZBED1;ID=intron:CHM13_chrY_T0000179:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2177564	2177714	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=CHM13_chrY_T0000179;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000179;transcript_name=CHM13_chrY_T0000179;gene_name=ZBED1;ID=exon:CHM13_chrY_T0000179:1;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2163158	2177714	100	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=CHM13_chrY_T0000180;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_G0000043;transcript_name=CHM13_chrY_T0000180;gene_name=ZBED1;ID=CHM13_chrY_T0000180;Name=ZBED1
CHM13_chrY	CAT	exon	2163158	2167513	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=CHM13_chrY_T0000180;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000180;transcript_name=CHM13_chrY_T0000180;gene_name=ZBED1;ID=exon:CHM13_chrY_T0000180:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2165379	2167463	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=CHM13_chrY_T0000180;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000180;transcript_name=CHM13_chrY_T0000180;gene_name=ZBED1;ID=CDS:CHM13_chrY_T0000180:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2165379	2165381	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=CHM13_chrY_T0000180;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000180;transcript_name=CHM13_chrY_T0000180;gene_name=ZBED1;ID=stop_codon:CHM13_chrY_T0000180;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2167461	2167463	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=CHM13_chrY_T0000180;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000180;transcript_name=CHM13_chrY_T0000180;gene_name=ZBED1;ID=start_codon:CHM13_chrY_T0000180;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2167514	2177563	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=CHM13_chrY_T0000180;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000180;transcript_name=CHM13_chrY_T0000180;gene_name=ZBED1;ID=intron:CHM13_chrY_T0000180:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2177564	2177714	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=CHM13_chrY_T0000180;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000180;transcript_name=CHM13_chrY_T0000180;gene_name=ZBED1;ID=exon:CHM13_chrY_T0000180:1;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2163179	2177723	100	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=CHM13_chrY_T0000181;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_G0000043;transcript_name=CHM13_chrY_T0000181;gene_name=ZBED1;ID=CHM13_chrY_T0000181;Name=ZBED1
CHM13_chrY	CAT	exon	2163179	2167516	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=CHM13_chrY_T0000181;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000181;transcript_name=CHM13_chrY_T0000181;gene_name=ZBED1;ID=exon:CHM13_chrY_T0000181:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2165379	2167463	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=CHM13_chrY_T0000181;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000181;transcript_name=CHM13_chrY_T0000181;gene_name=ZBED1;ID=CDS:CHM13_chrY_T0000181:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2165379	2165381	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=CHM13_chrY_T0000181;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000181;transcript_name=CHM13_chrY_T0000181;gene_name=ZBED1;ID=stop_codon:CHM13_chrY_T0000181;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2167461	2167463	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=CHM13_chrY_T0000181;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000181;transcript_name=CHM13_chrY_T0000181;gene_name=ZBED1;ID=start_codon:CHM13_chrY_T0000181;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2167517	2177563	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=CHM13_chrY_T0000181;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000181;transcript_name=CHM13_chrY_T0000181;gene_name=ZBED1;ID=intron:CHM13_chrY_T0000181:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2177564	2177723	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=CHM13_chrY_T0000181;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000181;transcript_name=CHM13_chrY_T0000181;gene_name=ZBED1;ID=exon:CHM13_chrY_T0000181:1;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2163726	2165715	1000	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.779;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=CHM13_chrY_T0000182;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_G0000043;transcript_name=CHM13_chrY_T0000182;gene_name=ZBED1;ID=CHM13_chrY_T0000182;Name=ZBED1
CHM13_chrY	CAT	exon	2163726	2164446	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=CHM13_chrY_T0000182;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000182;transcript_name=CHM13_chrY_T0000182;gene_name=ZBED1;ID=exon:CHM13_chrY_T0000182:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2164447	2165531	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=CHM13_chrY_T0000182;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000182;transcript_name=CHM13_chrY_T0000182;gene_name=ZBED1;ID=intron:CHM13_chrY_T0000182:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2165532	2165715	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=299.779;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=CHM13_chrY_T0000182;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000182;transcript_name=CHM13_chrY_T0000182;gene_name=ZBED1;ID=exon:CHM13_chrY_T0000182:1;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2164930	2177302	100	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=CHM13_chrY_T0000183;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_G0000043;transcript_name=CHM13_chrY_T0000183;gene_name=ZBED1;ID=CHM13_chrY_T0000183;Name=ZBED1
CHM13_chrY	CAT	exon	2164930	2167516	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=CHM13_chrY_T0000183;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000183;transcript_name=CHM13_chrY_T0000183;gene_name=ZBED1;ID=exon:CHM13_chrY_T0000183:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2165379	2167463	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=CHM13_chrY_T0000183;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000183;transcript_name=CHM13_chrY_T0000183;gene_name=ZBED1;ID=CDS:CHM13_chrY_T0000183:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2165379	2165381	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=CHM13_chrY_T0000183;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000183;transcript_name=CHM13_chrY_T0000183;gene_name=ZBED1;ID=stop_codon:CHM13_chrY_T0000183;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2167461	2167463	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=CHM13_chrY_T0000183;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000183;transcript_name=CHM13_chrY_T0000183;gene_name=ZBED1;ID=start_codon:CHM13_chrY_T0000183;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2167517	2177057	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=CHM13_chrY_T0000183;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000183;transcript_name=CHM13_chrY_T0000183;gene_name=ZBED1;ID=intron:CHM13_chrY_T0000183:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2177058	2177302	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=CHM13_chrY_T0000183;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000183;transcript_name=CHM13_chrY_T0000183;gene_name=ZBED1;ID=exon:CHM13_chrY_T0000183:1;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2166649	2177642	100	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=CHM13_chrY_T0000184;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_G0000043;transcript_name=CHM13_chrY_T0000184;gene_name=ZBED1;ID=CHM13_chrY_T0000184;Name=ZBED1
CHM13_chrY	CAT	exon	2166649	2167516	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=CHM13_chrY_T0000184;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000184;transcript_name=CHM13_chrY_T0000184;gene_name=ZBED1;ID=exon:CHM13_chrY_T0000184:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2166649	2167463	.	-	0	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=CHM13_chrY_T0000184;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000184;transcript_name=CHM13_chrY_T0000184;gene_name=ZBED1;ID=CDS:CHM13_chrY_T0000184:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2167461	2167463	.	-	0	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=CHM13_chrY_T0000184;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000184;transcript_name=CHM13_chrY_T0000184;gene_name=ZBED1;ID=start_codon:CHM13_chrY_T0000184;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2167517	2177563	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=CHM13_chrY_T0000184;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000184;transcript_name=CHM13_chrY_T0000184;gene_name=ZBED1;ID=intron:CHM13_chrY_T0000184:0;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2177564	2177642	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=CHM13_chrY_T0000184;gene_id=CHM13_chrY_G0000043;Parent=CHM13_chrY_T0000184;transcript_name=CHM13_chrY_T0000184;gene_name=ZBED1;ID=exon:CHM13_chrY_T0000184:1;Name=ZBED1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2176992	2179860	.	+	.	source_gene_common_name=ENSG00000310551;source_gene=ENSG00000310551.1;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;gene_id=CHM13_chrY_G0000044;gene_biotype=lncRNA;gene_name=ENSG00000310551;gene_sources=liftoff;ID=CHM13_chrY_G0000044;Name=ENSG00000310551
CHM13_chrY	CAT	transcript	2176992	2179860	1000	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=299.194;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=CHM13_chrY_T0000185;gene_id=CHM13_chrY_G0000044;Parent=CHM13_chrY_G0000044;transcript_name=CHM13_chrY_T0000185;gene_name=ENSG00000310551;ID=CHM13_chrY_T0000185;Name=ENSG00000310551
CHM13_chrY	CAT	exon	2176992	2177063	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=299.194;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=CHM13_chrY_T0000185;gene_id=CHM13_chrY_G0000044;Parent=CHM13_chrY_T0000185;transcript_name=CHM13_chrY_T0000185;gene_name=ENSG00000310551;ID=exon:CHM13_chrY_T0000185:0;Name=ENSG00000310551;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2177064	2179560	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=299.194;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=CHM13_chrY_T0000185;gene_id=CHM13_chrY_G0000044;Parent=CHM13_chrY_T0000185;transcript_name=CHM13_chrY_T0000185;gene_name=ENSG00000310551;ID=intron:CHM13_chrY_T0000185:0;Name=ENSG00000310551;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2179561	2179860	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=299.194;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=CHM13_chrY_T0000185;gene_id=CHM13_chrY_G0000044;Parent=CHM13_chrY_T0000185;transcript_name=CHM13_chrY_T0000185;gene_name=ENSG00000310551;ID=exon:CHM13_chrY_T0000185:1;Name=ENSG00000310551;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2242578	2286194	.	-	.	source_gene_common_name=LINC03112;source_gene=ENSG00000292360.2;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;gene_id=CHM13_chrY_G0000045;gene_biotype=lncRNA;gene_name=LINC03112;gene_sources=liftoff;ID=CHM13_chrY_G0000045;Name=LINC03112
CHM13_chrY	CAT	transcript	2242578	2286194	1000	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=CHM13_chrY_T0000186;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000186;gene_name=LINC03112;ID=CHM13_chrY_T0000186;Name=LINC03112
CHM13_chrY	CAT	exon	2242578	2243848	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=CHM13_chrY_T0000186;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000186;transcript_name=CHM13_chrY_T0000186;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000186:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2286007	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=CHM13_chrY_T0000186;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000186;transcript_name=CHM13_chrY_T0000186;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000186:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286194	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=CHM13_chrY_T0000186;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000186;transcript_name=CHM13_chrY_T0000186;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000186:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242580	2286107	1000	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=CHM13_chrY_T0000187;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000187;gene_name=LINC03112;ID=CHM13_chrY_T0000187;Name=LINC03112
CHM13_chrY	CAT	exon	2242580	2243848	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=CHM13_chrY_T0000187;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000187;transcript_name=CHM13_chrY_T0000187;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000187:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=CHM13_chrY_T0000187;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000187;transcript_name=CHM13_chrY_T0000187;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000187:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246721	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=CHM13_chrY_T0000187;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000187;transcript_name=CHM13_chrY_T0000187;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000187:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246722	2286007	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=CHM13_chrY_T0000187;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000187;transcript_name=CHM13_chrY_T0000187;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000187:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286107	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=299.869;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=CHM13_chrY_T0000187;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000187;transcript_name=CHM13_chrY_T0000187;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000187:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242581	2286094	1000	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=CHM13_chrY_T0000188;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000188;gene_name=LINC03112;ID=CHM13_chrY_T0000188;Name=LINC03112
CHM13_chrY	CAT	exon	2242581	2243848	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=CHM13_chrY_T0000188;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000188;transcript_name=CHM13_chrY_T0000188;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000188:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=CHM13_chrY_T0000188;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000188;transcript_name=CHM13_chrY_T0000188;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000188:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246721	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=CHM13_chrY_T0000188;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000188;transcript_name=CHM13_chrY_T0000188;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000188:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246722	2281897	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=CHM13_chrY_T0000188;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000188;transcript_name=CHM13_chrY_T0000188;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000188:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2281898	2282179	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=CHM13_chrY_T0000188;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000188;transcript_name=CHM13_chrY_T0000188;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000188:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2282180	2286007	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=CHM13_chrY_T0000188;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000188;transcript_name=CHM13_chrY_T0000188;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000188:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286094	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.88800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=CHM13_chrY_T0000188;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000188;transcript_name=CHM13_chrY_T0000188;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000188:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242581	2286113	1000	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=CHM13_chrY_T0000189;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000189;gene_name=LINC03112;ID=CHM13_chrY_T0000189;Name=LINC03112
CHM13_chrY	CAT	exon	2242581	2243848	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=CHM13_chrY_T0000189;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000189;transcript_name=CHM13_chrY_T0000189;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000189:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=CHM13_chrY_T0000189;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000189;transcript_name=CHM13_chrY_T0000189;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000189:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246721	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=CHM13_chrY_T0000189;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000189;transcript_name=CHM13_chrY_T0000189;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000189:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246722	2250613	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=CHM13_chrY_T0000189;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000189;transcript_name=CHM13_chrY_T0000189;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000189:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2250614	2250807	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=CHM13_chrY_T0000189;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000189;transcript_name=CHM13_chrY_T0000189;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000189:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2250808	2286007	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=CHM13_chrY_T0000189;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000189;transcript_name=CHM13_chrY_T0000189;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000189:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286113	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=CHM13_chrY_T0000189;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000189;transcript_name=CHM13_chrY_T0000189;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000189:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242582	2286069	1000	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=CHM13_chrY_T0000190;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000190;gene_name=LINC03112;ID=CHM13_chrY_T0000190;Name=LINC03112
CHM13_chrY	CAT	exon	2242582	2243201	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=CHM13_chrY_T0000190;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000190;transcript_name=CHM13_chrY_T0000190;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000190:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243202	2243640	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=CHM13_chrY_T0000190;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000190;transcript_name=CHM13_chrY_T0000190;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000190:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2243641	2243848	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=CHM13_chrY_T0000190;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000190;transcript_name=CHM13_chrY_T0000190;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000190:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=CHM13_chrY_T0000190;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000190;transcript_name=CHM13_chrY_T0000190;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000190:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246653	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=CHM13_chrY_T0000190;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000190;transcript_name=CHM13_chrY_T0000190;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000190:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246654	2286007	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=CHM13_chrY_T0000190;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000190;transcript_name=CHM13_chrY_T0000190;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000190:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286069	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=CHM13_chrY_T0000190;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000190;transcript_name=CHM13_chrY_T0000190;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000190:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242583	2286093	1000	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=CHM13_chrY_T0000191;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000191;gene_name=LINC03112;ID=CHM13_chrY_T0000191;Name=LINC03112
CHM13_chrY	CAT	exon	2242583	2243848	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=CHM13_chrY_T0000191;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000191;transcript_name=CHM13_chrY_T0000191;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000191:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2274195	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=CHM13_chrY_T0000191;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000191;transcript_name=CHM13_chrY_T0000191;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000191:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2274196	2274353	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=CHM13_chrY_T0000191;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000191;transcript_name=CHM13_chrY_T0000191;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000191:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2274354	2286007	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=CHM13_chrY_T0000191;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000191;transcript_name=CHM13_chrY_T0000191;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000191:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286093	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=CHM13_chrY_T0000191;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000191;transcript_name=CHM13_chrY_T0000191;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000191:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242583	2286070	1000	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=CHM13_chrY_T0000192;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000192;gene_name=LINC03112;ID=CHM13_chrY_T0000192;Name=LINC03112
CHM13_chrY	CAT	exon	2242583	2243848	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=CHM13_chrY_T0000192;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000192;transcript_name=CHM13_chrY_T0000192;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000192:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=CHM13_chrY_T0000192;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000192;transcript_name=CHM13_chrY_T0000192;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000192:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246653	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=CHM13_chrY_T0000192;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000192;transcript_name=CHM13_chrY_T0000192;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000192:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246654	2250630	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=CHM13_chrY_T0000192;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000192;transcript_name=CHM13_chrY_T0000192;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000192:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2250631	2250807	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=CHM13_chrY_T0000192;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000192;transcript_name=CHM13_chrY_T0000192;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000192:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2250808	2286007	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=CHM13_chrY_T0000192;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000192;transcript_name=CHM13_chrY_T0000192;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000192:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286070	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=299.812;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=CHM13_chrY_T0000192;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000192;transcript_name=CHM13_chrY_T0000192;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000192:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242583	2286098	1000	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.93899999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=CHM13_chrY_T0000193;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000193;gene_name=LINC03112;ID=CHM13_chrY_T0000193;Name=LINC03112
CHM13_chrY	CAT	exon	2242583	2243848	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=CHM13_chrY_T0000193;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000193;transcript_name=CHM13_chrY_T0000193;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000193:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2281897	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=CHM13_chrY_T0000193;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000193;transcript_name=CHM13_chrY_T0000193;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000193:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2281898	2282179	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=CHM13_chrY_T0000193;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000193;transcript_name=CHM13_chrY_T0000193;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000193:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2282180	2286007	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=CHM13_chrY_T0000193;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000193;transcript_name=CHM13_chrY_T0000193;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000193:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286098	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=CHM13_chrY_T0000193;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000193;transcript_name=CHM13_chrY_T0000193;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000193:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242583	2286096	1000	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=CHM13_chrY_T0000194;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000194;gene_name=LINC03112;ID=CHM13_chrY_T0000194;Name=LINC03112
CHM13_chrY	CAT	exon	2242583	2243848	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=CHM13_chrY_T0000194;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000194;transcript_name=CHM13_chrY_T0000194;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000194:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=CHM13_chrY_T0000194;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000194;transcript_name=CHM13_chrY_T0000194;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000194:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246721	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=CHM13_chrY_T0000194;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000194;transcript_name=CHM13_chrY_T0000194;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000194:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246722	2250715	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=CHM13_chrY_T0000194;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000194;transcript_name=CHM13_chrY_T0000194;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000194:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2250716	2250807	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=CHM13_chrY_T0000194;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000194;transcript_name=CHM13_chrY_T0000194;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000194:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2250808	2286007	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=CHM13_chrY_T0000194;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000194;transcript_name=CHM13_chrY_T0000194;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000194:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286096	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=CHM13_chrY_T0000194;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000194;transcript_name=CHM13_chrY_T0000194;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000194:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242583	2286080	1000	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=CHM13_chrY_T0000195;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000195;gene_name=LINC03112;ID=CHM13_chrY_T0000195;Name=LINC03112
CHM13_chrY	CAT	exon	2242583	2242704	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=CHM13_chrY_T0000195;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000195;transcript_name=CHM13_chrY_T0000195;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000195:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2242705	2243640	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=CHM13_chrY_T0000195;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000195;transcript_name=CHM13_chrY_T0000195;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000195:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2243641	2243848	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=CHM13_chrY_T0000195;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000195;transcript_name=CHM13_chrY_T0000195;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000195:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2286007	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=CHM13_chrY_T0000195;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000195;transcript_name=CHM13_chrY_T0000195;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000195:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286080	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=299.752;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=CHM13_chrY_T0000195;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000195;transcript_name=CHM13_chrY_T0000195;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000195:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242583	2286063	1000	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=CHM13_chrY_T0000196;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000196;gene_name=LINC03112;ID=CHM13_chrY_T0000196;Name=LINC03112
CHM13_chrY	CAT	exon	2242583	2243848	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=CHM13_chrY_T0000196;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000196;transcript_name=CHM13_chrY_T0000196;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000196:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2285927	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=CHM13_chrY_T0000196;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000196;transcript_name=CHM13_chrY_T0000196;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000196:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2285928	2286063	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=CHM13_chrY_T0000196;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000196;transcript_name=CHM13_chrY_T0000196;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000196:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242583	2260883	1000	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=CHM13_chrY_T0000197;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000197;gene_name=LINC03112;ID=CHM13_chrY_T0000197;Name=LINC03112
CHM13_chrY	CAT	exon	2242583	2243848	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=CHM13_chrY_T0000197;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000197;transcript_name=CHM13_chrY_T0000197;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000197:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2260745	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=CHM13_chrY_T0000197;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000197;transcript_name=CHM13_chrY_T0000197;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000197:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2260746	2260883	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=CHM13_chrY_T0000197;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000197;transcript_name=CHM13_chrY_T0000197;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000197:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242583	2286091	1000	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=CHM13_chrY_T0000198;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000198;gene_name=LINC03112;ID=CHM13_chrY_T0000198;Name=LINC03112
CHM13_chrY	CAT	exon	2242583	2243848	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=CHM13_chrY_T0000198;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000198;transcript_name=CHM13_chrY_T0000198;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000198:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=CHM13_chrY_T0000198;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000198;transcript_name=CHM13_chrY_T0000198;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000198:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246721	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=CHM13_chrY_T0000198;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000198;transcript_name=CHM13_chrY_T0000198;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000198:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246722	2250630	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=CHM13_chrY_T0000198;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000198;transcript_name=CHM13_chrY_T0000198;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000198:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2250631	2250807	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=CHM13_chrY_T0000198;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000198;transcript_name=CHM13_chrY_T0000198;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000198:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2250808	2286007	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=CHM13_chrY_T0000198;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000198;transcript_name=CHM13_chrY_T0000198;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000198:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286091	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=299.822;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=CHM13_chrY_T0000198;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000198;transcript_name=CHM13_chrY_T0000198;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000198:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242583	2286085	1000	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=CHM13_chrY_T0000199;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000199;gene_name=LINC03112;ID=CHM13_chrY_T0000199;Name=LINC03112
CHM13_chrY	CAT	exon	2242583	2243848	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=CHM13_chrY_T0000199;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000199;transcript_name=CHM13_chrY_T0000199;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000199:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=CHM13_chrY_T0000199;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000199;transcript_name=CHM13_chrY_T0000199;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000199:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246653	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=CHM13_chrY_T0000199;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000199;transcript_name=CHM13_chrY_T0000199;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000199:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246654	2250613	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=CHM13_chrY_T0000199;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000199;transcript_name=CHM13_chrY_T0000199;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000199:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2250614	2250807	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=CHM13_chrY_T0000199;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000199;transcript_name=CHM13_chrY_T0000199;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000199:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2250808	2286007	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=CHM13_chrY_T0000199;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000199;transcript_name=CHM13_chrY_T0000199;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000199:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286085	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=299.815;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=CHM13_chrY_T0000199;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000199;transcript_name=CHM13_chrY_T0000199;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000199:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242583	2286087	1000	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=CHM13_chrY_T0000200;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000200;gene_name=LINC03112;ID=CHM13_chrY_T0000200;Name=LINC03112
CHM13_chrY	CAT	exon	2242583	2243848	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=CHM13_chrY_T0000200;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000200;transcript_name=CHM13_chrY_T0000200;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000200:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=CHM13_chrY_T0000200;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000200;transcript_name=CHM13_chrY_T0000200;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000200:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246653	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=CHM13_chrY_T0000200;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000200;transcript_name=CHM13_chrY_T0000200;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000200:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246654	2286007	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=CHM13_chrY_T0000200;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000200;transcript_name=CHM13_chrY_T0000200;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000200:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286087	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=CHM13_chrY_T0000200;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000200;transcript_name=CHM13_chrY_T0000200;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000200:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242584	2286085	1000	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=CHM13_chrY_T0000201;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000201;gene_name=LINC03112;ID=CHM13_chrY_T0000201;Name=LINC03112
CHM13_chrY	CAT	exon	2242584	2243848	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=CHM13_chrY_T0000201;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000201;transcript_name=CHM13_chrY_T0000201;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000201:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2250630	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=CHM13_chrY_T0000201;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000201;transcript_name=CHM13_chrY_T0000201;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000201:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2250631	2250807	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=CHM13_chrY_T0000201;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000201;transcript_name=CHM13_chrY_T0000201;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000201:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2250808	2286007	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=CHM13_chrY_T0000201;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000201;transcript_name=CHM13_chrY_T0000201;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000201:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286085	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=299.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=CHM13_chrY_T0000201;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000201;transcript_name=CHM13_chrY_T0000201;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000201:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242585	2286094	1000	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=CHM13_chrY_T0000202;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000202;gene_name=LINC03112;ID=CHM13_chrY_T0000202;Name=LINC03112
CHM13_chrY	CAT	exon	2242585	2243848	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=CHM13_chrY_T0000202;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000202;transcript_name=CHM13_chrY_T0000202;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000202:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=CHM13_chrY_T0000202;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000202;transcript_name=CHM13_chrY_T0000202;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000202:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246721	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=CHM13_chrY_T0000202;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000202;transcript_name=CHM13_chrY_T0000202;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000202:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246722	2249675	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=CHM13_chrY_T0000202;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000202;transcript_name=CHM13_chrY_T0000202;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000202:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2249676	2250008	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=CHM13_chrY_T0000202;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000202;transcript_name=CHM13_chrY_T0000202;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000202:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2250009	2286007	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=CHM13_chrY_T0000202;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000202;transcript_name=CHM13_chrY_T0000202;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000202:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286094	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=299.674;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=CHM13_chrY_T0000202;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000202;transcript_name=CHM13_chrY_T0000202;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000202:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242585	2286094	1000	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=CHM13_chrY_T0000203;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000203;gene_name=LINC03112;ID=CHM13_chrY_T0000203;Name=LINC03112
CHM13_chrY	CAT	exon	2242585	2243848	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=CHM13_chrY_T0000203;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000203;transcript_name=CHM13_chrY_T0000203;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000203:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=CHM13_chrY_T0000203;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000203;transcript_name=CHM13_chrY_T0000203;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000203:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246721	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=CHM13_chrY_T0000203;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000203;transcript_name=CHM13_chrY_T0000203;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000203:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246722	2251439	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=CHM13_chrY_T0000203;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000203;transcript_name=CHM13_chrY_T0000203;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000203:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2251440	2251549	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=CHM13_chrY_T0000203;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000203;transcript_name=CHM13_chrY_T0000203;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000203:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2251550	2251697	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=CHM13_chrY_T0000203;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000203;transcript_name=CHM13_chrY_T0000203;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000203:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2251698	2251787	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=CHM13_chrY_T0000203;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000203;transcript_name=CHM13_chrY_T0000203;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000203:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2251788	2286007	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=CHM13_chrY_T0000203;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000203;transcript_name=CHM13_chrY_T0000203;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000203:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286094	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=299.824;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=CHM13_chrY_T0000203;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000203;transcript_name=CHM13_chrY_T0000203;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000203:4;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242585	2286086	1000	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=CHM13_chrY_T0000204;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000204;gene_name=LINC03112;ID=CHM13_chrY_T0000204;Name=LINC03112
CHM13_chrY	CAT	exon	2242585	2243848	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=CHM13_chrY_T0000204;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000204;transcript_name=CHM13_chrY_T0000204;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000204:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=CHM13_chrY_T0000204;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000204;transcript_name=CHM13_chrY_T0000204;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000204:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246721	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=CHM13_chrY_T0000204;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000204;transcript_name=CHM13_chrY_T0000204;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000204:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246722	2281897	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=CHM13_chrY_T0000204;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000204;transcript_name=CHM13_chrY_T0000204;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000204:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2281898	2282203	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=CHM13_chrY_T0000204;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000204;transcript_name=CHM13_chrY_T0000204;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000204:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2282204	2286007	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=CHM13_chrY_T0000204;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000204;transcript_name=CHM13_chrY_T0000204;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000204:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286086	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=CHM13_chrY_T0000204;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000204;transcript_name=CHM13_chrY_T0000204;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000204:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242585	2286073	1000	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=CHM13_chrY_T0000205;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000205;gene_name=LINC03112;ID=CHM13_chrY_T0000205;Name=LINC03112
CHM13_chrY	CAT	exon	2242585	2243848	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=CHM13_chrY_T0000205;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000205;transcript_name=CHM13_chrY_T0000205;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000205:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=CHM13_chrY_T0000205;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000205;transcript_name=CHM13_chrY_T0000205;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000205:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246721	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=CHM13_chrY_T0000205;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000205;transcript_name=CHM13_chrY_T0000205;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000205:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246722	2250613	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=CHM13_chrY_T0000205;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000205;transcript_name=CHM13_chrY_T0000205;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000205:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2250614	2250807	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=CHM13_chrY_T0000205;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000205;transcript_name=CHM13_chrY_T0000205;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000205:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2250808	2281897	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=CHM13_chrY_T0000205;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000205;transcript_name=CHM13_chrY_T0000205;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000205:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2281898	2282179	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=CHM13_chrY_T0000205;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000205;transcript_name=CHM13_chrY_T0000205;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000205:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2282180	2286007	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=CHM13_chrY_T0000205;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000205;transcript_name=CHM13_chrY_T0000205;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000205:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286073	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.847;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=CHM13_chrY_T0000205;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000205;transcript_name=CHM13_chrY_T0000205;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000205:4;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242585	2286070	1000	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.93899999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=CHM13_chrY_T0000206;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000206;gene_name=LINC03112;ID=CHM13_chrY_T0000206;Name=LINC03112
CHM13_chrY	CAT	exon	2242585	2243848	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=CHM13_chrY_T0000206;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000206;transcript_name=CHM13_chrY_T0000206;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000206:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2281897	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=CHM13_chrY_T0000206;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000206;transcript_name=CHM13_chrY_T0000206;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000206:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2281898	2282203	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=CHM13_chrY_T0000206;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000206;transcript_name=CHM13_chrY_T0000206;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000206:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2282204	2286007	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=CHM13_chrY_T0000206;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000206;transcript_name=CHM13_chrY_T0000206;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000206:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286070	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.93899999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=CHM13_chrY_T0000206;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000206;transcript_name=CHM13_chrY_T0000206;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000206:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242585	2286069	1000	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=CHM13_chrY_T0000207;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000207;gene_name=LINC03112;ID=CHM13_chrY_T0000207;Name=LINC03112
CHM13_chrY	CAT	exon	2242585	2243848	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=CHM13_chrY_T0000207;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000207;transcript_name=CHM13_chrY_T0000207;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000207:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=CHM13_chrY_T0000207;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000207;transcript_name=CHM13_chrY_T0000207;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000207:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246653	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=CHM13_chrY_T0000207;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000207;transcript_name=CHM13_chrY_T0000207;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000207:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246654	2250715	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=CHM13_chrY_T0000207;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000207;transcript_name=CHM13_chrY_T0000207;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000207:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2250716	2250807	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=CHM13_chrY_T0000207;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000207;transcript_name=CHM13_chrY_T0000207;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000207:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2250808	2286007	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=CHM13_chrY_T0000207;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000207;transcript_name=CHM13_chrY_T0000207;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000207:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286069	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=299.801;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=CHM13_chrY_T0000207;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000207;transcript_name=CHM13_chrY_T0000207;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000207:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242585	2286066	1000	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=CHM13_chrY_T0000208;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000208;gene_name=LINC03112;ID=CHM13_chrY_T0000208;Name=LINC03112
CHM13_chrY	CAT	exon	2242585	2243848	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=CHM13_chrY_T0000208;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000208;transcript_name=CHM13_chrY_T0000208;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000208:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=CHM13_chrY_T0000208;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000208;transcript_name=CHM13_chrY_T0000208;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000208:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246721	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=CHM13_chrY_T0000208;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000208;transcript_name=CHM13_chrY_T0000208;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000208:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246722	2258413	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=CHM13_chrY_T0000208;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000208;transcript_name=CHM13_chrY_T0000208;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000208:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2258414	2258490	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=CHM13_chrY_T0000208;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000208;transcript_name=CHM13_chrY_T0000208;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000208:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2258491	2286007	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=CHM13_chrY_T0000208;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000208;transcript_name=CHM13_chrY_T0000208;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000208:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286066	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=CHM13_chrY_T0000208;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000208;transcript_name=CHM13_chrY_T0000208;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000208:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242585	2286063	1000	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=CHM13_chrY_T0000209;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000209;gene_name=LINC03112;ID=CHM13_chrY_T0000209;Name=LINC03112
CHM13_chrY	CAT	exon	2242585	2242704	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=CHM13_chrY_T0000209;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000209;transcript_name=CHM13_chrY_T0000209;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000209:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2242705	2243640	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=CHM13_chrY_T0000209;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000209;transcript_name=CHM13_chrY_T0000209;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000209:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2243641	2243848	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=CHM13_chrY_T0000209;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000209;transcript_name=CHM13_chrY_T0000209;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000209:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2285927	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=CHM13_chrY_T0000209;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000209;transcript_name=CHM13_chrY_T0000209;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000209:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2285928	2286063	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=299.569;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=CHM13_chrY_T0000209;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000209;transcript_name=CHM13_chrY_T0000209;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000209:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242585	2286058	1000	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=CHM13_chrY_T0000210;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000210;gene_name=LINC03112;ID=CHM13_chrY_T0000210;Name=LINC03112
CHM13_chrY	CAT	exon	2242585	2243848	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=CHM13_chrY_T0000210;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000210;transcript_name=CHM13_chrY_T0000210;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000210:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=CHM13_chrY_T0000210;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000210;transcript_name=CHM13_chrY_T0000210;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000210:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246721	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=CHM13_chrY_T0000210;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000210;transcript_name=CHM13_chrY_T0000210;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000210:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246722	2250715	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=CHM13_chrY_T0000210;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000210;transcript_name=CHM13_chrY_T0000210;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000210:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2250716	2250807	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=CHM13_chrY_T0000210;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000210;transcript_name=CHM13_chrY_T0000210;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000210:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2250808	2281897	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=CHM13_chrY_T0000210;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000210;transcript_name=CHM13_chrY_T0000210;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000210:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2281898	2282179	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=CHM13_chrY_T0000210;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000210;transcript_name=CHM13_chrY_T0000210;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000210:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2282180	2286007	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=CHM13_chrY_T0000210;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000210;transcript_name=CHM13_chrY_T0000210;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000210:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286058	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.837;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=CHM13_chrY_T0000210;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000210;transcript_name=CHM13_chrY_T0000210;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000210:4;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242585	2260774	1000	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=CHM13_chrY_T0000211;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000211;gene_name=LINC03112;ID=CHM13_chrY_T0000211;Name=LINC03112
CHM13_chrY	CAT	exon	2242585	2243848	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=CHM13_chrY_T0000211;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000211;transcript_name=CHM13_chrY_T0000211;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000211:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=CHM13_chrY_T0000211;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000211;transcript_name=CHM13_chrY_T0000211;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000211:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246721	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=CHM13_chrY_T0000211;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000211;transcript_name=CHM13_chrY_T0000211;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000211:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246722	2260745	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=CHM13_chrY_T0000211;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000211;transcript_name=CHM13_chrY_T0000211;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000211:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2260746	2260774	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=CHM13_chrY_T0000211;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000211;transcript_name=CHM13_chrY_T0000211;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000211:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242585	2260506	1000	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=CHM13_chrY_T0000212;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000212;gene_name=LINC03112;ID=CHM13_chrY_T0000212;Name=LINC03112
CHM13_chrY	CAT	exon	2242585	2243848	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=CHM13_chrY_T0000212;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000212;transcript_name=CHM13_chrY_T0000212;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000212:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2260353	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=CHM13_chrY_T0000212;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000212;transcript_name=CHM13_chrY_T0000212;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000212:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2260354	2260506	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=299.929;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=CHM13_chrY_T0000212;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000212;transcript_name=CHM13_chrY_T0000212;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000212:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242588	2286085	1000	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=CHM13_chrY_T0000213;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000213;gene_name=LINC03112;ID=CHM13_chrY_T0000213;Name=LINC03112
CHM13_chrY	CAT	exon	2242588	2243848	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=CHM13_chrY_T0000213;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000213;transcript_name=CHM13_chrY_T0000213;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000213:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2246565	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=CHM13_chrY_T0000213;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000213;transcript_name=CHM13_chrY_T0000213;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000213:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2246566	2246653	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=CHM13_chrY_T0000213;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000213;transcript_name=CHM13_chrY_T0000213;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000213:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2246654	2281897	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=CHM13_chrY_T0000213;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000213;transcript_name=CHM13_chrY_T0000213;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000213:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2281898	2282179	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=CHM13_chrY_T0000213;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000213;transcript_name=CHM13_chrY_T0000213;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000213:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2282180	2286007	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=CHM13_chrY_T0000213;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000213;transcript_name=CHM13_chrY_T0000213;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000213:2;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286085	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.883;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=CHM13_chrY_T0000213;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000213;transcript_name=CHM13_chrY_T0000213;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000213:3;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2242588	2258607	1000	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=CHM13_chrY_T0000214;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000214;gene_name=LINC03112;ID=CHM13_chrY_T0000214;Name=LINC03112
CHM13_chrY	CAT	exon	2242588	2243848	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=CHM13_chrY_T0000214;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000214;transcript_name=CHM13_chrY_T0000214;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000214:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2243849	2258413	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=CHM13_chrY_T0000214;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000214;transcript_name=CHM13_chrY_T0000214;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000214:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2258414	2258607	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=299.931;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=CHM13_chrY_T0000214;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000214;transcript_name=CHM13_chrY_T0000214;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000214:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2281812	2286074	1000	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=CHM13_chrY_T0000219;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000219;gene_name=LINC03112;ID=CHM13_chrY_T0000219;Name=LINC03112
CHM13_chrY	CAT	exon	2281812	2282179	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=CHM13_chrY_T0000219;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000219;transcript_name=CHM13_chrY_T0000219;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000219:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2282180	2286007	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=CHM13_chrY_T0000219;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000219;transcript_name=CHM13_chrY_T0000219;gene_name=LINC03112;ID=intron:CHM13_chrY_T0000219:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2286008	2286074	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=CHM13_chrY_T0000219;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000219;transcript_name=CHM13_chrY_T0000219;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000219:1;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2285353	2286085	1000	-	.	source_transcript=ENST00000850817.1;source_transcript_name=LINC03112-256;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850817.1;transcript_score=199.727;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850817.1,ENST00000850817.1;transcript_id=CHM13_chrY_T0000221;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_G0000045;transcript_name=CHM13_chrY_T0000221;gene_name=LINC03112;ID=CHM13_chrY_T0000221;Name=LINC03112
CHM13_chrY	CAT	exon	2285353	2286085	.	-	.	source_transcript=ENST00000850817.1;source_transcript_name=LINC03112-256;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850817.1;transcript_score=199.727;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850817.1,ENST00000850817.1;transcript_id=CHM13_chrY_T0000221;gene_id=CHM13_chrY_G0000045;Parent=CHM13_chrY_T0000221;transcript_name=CHM13_chrY_T0000221;gene_name=LINC03112;ID=exon:CHM13_chrY_T0000221:0;Name=LINC03112;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2260566	2282929	.	+	.	source_gene_common_name=ENSG00000310557;source_gene=ENSG00000310557.1;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;gene_id=CHM13_chrY_G0000046;gene_biotype=lncRNA;gene_name=ENSG00000310557;gene_sources=liftoff;ID=CHM13_chrY_G0000046;Name=ENSG00000310557
CHM13_chrY	CAT	transcript	2260566	2282929	1000	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=CHM13_chrY_T0000215;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_G0000046;transcript_name=CHM13_chrY_T0000215;gene_name=ENSG00000310557;ID=CHM13_chrY_T0000215;Name=ENSG00000310557
CHM13_chrY	CAT	exon	2260566	2260757	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=CHM13_chrY_T0000215;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000215;transcript_name=CHM13_chrY_T0000215;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000215:0;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2260758	2270239	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=CHM13_chrY_T0000215;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000215;transcript_name=CHM13_chrY_T0000215;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000215:0;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2270240	2270314	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=CHM13_chrY_T0000215;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000215;transcript_name=CHM13_chrY_T0000215;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000215:1;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2270315	2273792	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=CHM13_chrY_T0000215;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000215;transcript_name=CHM13_chrY_T0000215;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000215:1;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2273793	2273955	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=CHM13_chrY_T0000215;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000215;transcript_name=CHM13_chrY_T0000215;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000215:2;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2273956	2282721	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=CHM13_chrY_T0000215;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000215;transcript_name=CHM13_chrY_T0000215;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000215:2;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2282722	2282929	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=CHM13_chrY_T0000215;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000215;transcript_name=CHM13_chrY_T0000215;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000215:3;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2260567	2280154	1000	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=CHM13_chrY_T0000216;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_G0000046;transcript_name=CHM13_chrY_T0000216;gene_name=ENSG00000310557;ID=CHM13_chrY_T0000216;Name=ENSG00000310557
CHM13_chrY	CAT	exon	2260567	2260757	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=CHM13_chrY_T0000216;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000216;transcript_name=CHM13_chrY_T0000216;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000216:0;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2260758	2270239	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=CHM13_chrY_T0000216;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000216;transcript_name=CHM13_chrY_T0000216;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000216:0;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2270240	2270314	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=CHM13_chrY_T0000216;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000216;transcript_name=CHM13_chrY_T0000216;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000216:1;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2270315	2273792	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=CHM13_chrY_T0000216;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000216;transcript_name=CHM13_chrY_T0000216;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000216:1;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2273793	2273955	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=CHM13_chrY_T0000216;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000216;transcript_name=CHM13_chrY_T0000216;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000216:2;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2273956	2279815	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=CHM13_chrY_T0000216;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000216;transcript_name=CHM13_chrY_T0000216;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000216:2;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2279816	2280154	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=CHM13_chrY_T0000216;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000216;transcript_name=CHM13_chrY_T0000216;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000216:3;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2260569	2282928	1000	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=CHM13_chrY_T0000217;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_G0000046;transcript_name=CHM13_chrY_T0000217;gene_name=ENSG00000310557;ID=CHM13_chrY_T0000217;Name=ENSG00000310557
CHM13_chrY	CAT	exon	2260569	2260757	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=CHM13_chrY_T0000217;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000217;transcript_name=CHM13_chrY_T0000217;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000217:0;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2260758	2269764	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=CHM13_chrY_T0000217;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000217;transcript_name=CHM13_chrY_T0000217;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000217:0;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2269765	2269891	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=CHM13_chrY_T0000217;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000217;transcript_name=CHM13_chrY_T0000217;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000217:1;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2269892	2270191	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=CHM13_chrY_T0000217;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000217;transcript_name=CHM13_chrY_T0000217;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000217:1;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2270192	2270314	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=CHM13_chrY_T0000217;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000217;transcript_name=CHM13_chrY_T0000217;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000217:2;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2270315	2273792	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=CHM13_chrY_T0000217;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000217;transcript_name=CHM13_chrY_T0000217;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000217:2;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2273793	2273955	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=CHM13_chrY_T0000217;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000217;transcript_name=CHM13_chrY_T0000217;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000217:3;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2273956	2282721	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=CHM13_chrY_T0000217;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000217;transcript_name=CHM13_chrY_T0000217;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000217:3;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2282722	2282928	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=CHM13_chrY_T0000217;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000217;transcript_name=CHM13_chrY_T0000217;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000217:4;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2260655	2280136	1000	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=CHM13_chrY_T0000218;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_G0000046;transcript_name=CHM13_chrY_T0000218;gene_name=ENSG00000310557;ID=CHM13_chrY_T0000218;Name=ENSG00000310557
CHM13_chrY	CAT	exon	2260655	2260757	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=CHM13_chrY_T0000218;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000218;transcript_name=CHM13_chrY_T0000218;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000218:0;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2260758	2269764	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=CHM13_chrY_T0000218;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000218;transcript_name=CHM13_chrY_T0000218;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000218:0;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2269765	2269891	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=CHM13_chrY_T0000218;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000218;transcript_name=CHM13_chrY_T0000218;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000218:1;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2269892	2270239	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=CHM13_chrY_T0000218;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000218;transcript_name=CHM13_chrY_T0000218;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000218:1;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2270240	2270314	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=CHM13_chrY_T0000218;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000218;transcript_name=CHM13_chrY_T0000218;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000218:2;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2270315	2273792	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=CHM13_chrY_T0000218;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000218;transcript_name=CHM13_chrY_T0000218;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000218:2;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2273793	2273955	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=CHM13_chrY_T0000218;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000218;transcript_name=CHM13_chrY_T0000218;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000218:3;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2273956	2279815	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=CHM13_chrY_T0000218;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000218;transcript_name=CHM13_chrY_T0000218;gene_name=ENSG00000310557;ID=intron:CHM13_chrY_T0000218:3;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2279816	2280136	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=CHM13_chrY_T0000218;gene_id=CHM13_chrY_G0000046;Parent=CHM13_chrY_T0000218;transcript_name=CHM13_chrY_T0000218;gene_name=ENSG00000310557;ID=exon:CHM13_chrY_T0000218:4;Name=ENSG00000310557;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2285308	2343563	.	+	.	source_gene_common_name=CD99P1;source_gene=ENSG00000292362.2;gene_id=CHM13_chrY_G0000047;gene_biotype=lncRNA;gene_name=CD99P1;gene_sources=liftoff;ID=CHM13_chrY_G0000047;Name=CD99P1
CHM13_chrY	CAT	transcript	2285308	2315481	1000	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=CHM13_chrY_T0000220;Name=CD99P1
CHM13_chrY	CAT	exon	2285308	2285377	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000220:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2285378	2287871	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000220:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000220:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000220:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000220:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000220:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000220:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000220:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000220:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000220:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000220:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000220:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000220:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000220:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000220:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000220:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315481	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000220;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000220;transcript_name=CHM13_chrY_T0000220;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000220:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2285748	2315487	1000	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=CHM13_chrY_T0000222;Name=CD99P1
CHM13_chrY	CAT	exon	2285748	2285870	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000222:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2285871	2287871	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000222:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000222:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000222:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000222:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000222:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000222:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000222:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000222:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000222:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000222:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000222:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000222:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000222:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000222:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000222:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315487	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000222;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000222;transcript_name=CHM13_chrY_T0000222;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000222:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2285776	2315489	1000	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=CHM13_chrY_T0000223;Name=CD99P1
CHM13_chrY	CAT	exon	2285776	2285870	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000223:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2285871	2287871	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000223:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000223:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000223:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000223:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000223:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000223:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000223:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000223:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000223:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000223:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000223:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000223:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000223:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000223:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000223:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000223:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000223:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315489	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000223;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000223;transcript_name=CHM13_chrY_T0000223;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000223:9;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2285831	2299675	1000	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=CHM13_chrY_T0000224;Name=CD99P1
CHM13_chrY	CAT	exon	2285831	2285870	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000224;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000224:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2285871	2287871	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000224;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000224:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000224;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000224:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000224;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000224:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000224;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000224:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000224;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000224:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000224;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000224:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000224;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000224:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000224;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000224:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000224;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000224:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000224;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000224:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000224;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000224:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299675	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000224;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000224;transcript_name=CHM13_chrY_T0000224;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000224:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286233	2315489	1000	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=CHM13_chrY_T0000226;Name=CD99P1
CHM13_chrY	CAT	exon	2286233	2286371	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000226:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000226:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000226:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000226:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000226:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2295605	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000226:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000226:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000226:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000226:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000226:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000226:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000226:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000226:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000226:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315489	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000226;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000226;transcript_name=CHM13_chrY_T0000226;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000226:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286242	2315483	1000	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=CHM13_chrY_T0000227;Name=CD99P1
CHM13_chrY	CAT	exon	2286242	2286371	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000227:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000227:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000227:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000227:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000227:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000227:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000227:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000227:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000227:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000227:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000227:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000227:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2300321	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000227:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000227:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000227:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000227:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000227;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000227;transcript_name=CHM13_chrY_T0000227;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000227:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286244	2315490	1000	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=CHM13_chrY_T0000228;Name=CD99P1
CHM13_chrY	CAT	exon	2286244	2286371	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000228:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000228:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000228:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000228:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000228:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000228:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000228:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000228:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000228:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000228:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000228:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000228:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000228:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000228:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000228:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000228:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000228:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000228:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315490	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000228;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000228;transcript_name=CHM13_chrY_T0000228;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000228:9;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286250	2315483	1000	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=CHM13_chrY_T0000229;Name=CD99P1
CHM13_chrY	CAT	exon	2286250	2286371	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000229:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000229:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000229:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000229:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000229:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000229:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000229:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000229:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000229:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000229:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000229:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000229:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000229:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000229:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000229:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2315127	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000229:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000229;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000229;transcript_name=CHM13_chrY_T0000229;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000229:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286250	2315878	1000	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=CHM13_chrY_T0000230;Name=CD99P1
CHM13_chrY	CAT	exon	2286250	2286371	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000230:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000230:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000230:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000230:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000230:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000230:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000230:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000230:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000230:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000230:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000230:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000230:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000230:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000230:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000230:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000230:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315878	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000230;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000230;transcript_name=CHM13_chrY_T0000230;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000230:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286250	2315483	1000	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000231;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000231;gene_name=CD99P1;ID=CHM13_chrY_T0000231;Name=CD99P1
CHM13_chrY	CAT	exon	2286250	2286371	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000231;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000231;transcript_name=CHM13_chrY_T0000231;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000231:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000231;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000231;transcript_name=CHM13_chrY_T0000231;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000231:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000231;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000231;transcript_name=CHM13_chrY_T0000231;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000231:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000231;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000231;transcript_name=CHM13_chrY_T0000231;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000231:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000231;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000231;transcript_name=CHM13_chrY_T0000231;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000231:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2315127	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000231;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000231;transcript_name=CHM13_chrY_T0000231;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000231:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000231;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000231;transcript_name=CHM13_chrY_T0000231;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000231:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286250	2336227	1000	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=CHM13_chrY_T0000232;Name=CD99P1
CHM13_chrY	CAT	exon	2286250	2286371	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000232:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000232:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000232:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000232:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000232:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000232:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000232:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000232:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000232:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000232:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000232:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000232:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000232:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000232:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000232:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2335669	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000232:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2335670	2336227	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000232;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000232;transcript_name=CHM13_chrY_T0000232;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000232:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286250	2294371	1000	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000233;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000233;gene_name=CD99P1;ID=CHM13_chrY_T0000233;Name=CD99P1
CHM13_chrY	CAT	exon	2286250	2286371	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000233;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000233;transcript_name=CHM13_chrY_T0000233;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000233:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000233;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000233;transcript_name=CHM13_chrY_T0000233;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000233:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000233;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000233;transcript_name=CHM13_chrY_T0000233;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000233:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000233;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000233;transcript_name=CHM13_chrY_T0000233;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000233:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000233;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000233;transcript_name=CHM13_chrY_T0000233;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000233:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000233;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000233;transcript_name=CHM13_chrY_T0000233;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000233:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2294371	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000233;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000233;transcript_name=CHM13_chrY_T0000233;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000233:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286259	2315489	1000	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=CHM13_chrY_T0000234;Name=CD99P1
CHM13_chrY	CAT	exon	2286259	2286371	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000234;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000234:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000234;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000234:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000234;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000234:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000234;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000234:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000234;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000234:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000234;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000234:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000234;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000234:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000234;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000234:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000234;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000234:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000234;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000234:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000234;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000234:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2315127	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000234;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000234:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315489	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000234;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000234;transcript_name=CHM13_chrY_T0000234;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000234:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286266	2343562	1000	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=CHM13_chrY_T0000235;Name=CD99P1
CHM13_chrY	CAT	exon	2286266	2286371	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000235:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000235:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000235:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000235:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000235:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000235:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000235:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000235:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000235:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000235:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000235:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000235:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000235:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000235:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000235:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000235:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000235:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2343042	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000235:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2343043	2343562	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000235;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000235;transcript_name=CHM13_chrY_T0000235;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000235:9;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286266	2315878	1000	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=CHM13_chrY_T0000236;Name=CD99P1
CHM13_chrY	CAT	exon	2286266	2286371	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000236:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000236:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000236:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000236:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000236:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2295605	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000236:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000236:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000236:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000236:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000236:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000236:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000236:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000236:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000236:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000236:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000236:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315878	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000236;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000236;transcript_name=CHM13_chrY_T0000236;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000236:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286266	2315489	1000	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=CHM13_chrY_T0000237;Name=CD99P1
CHM13_chrY	CAT	exon	2286266	2286371	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000237:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000237:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000237:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000237:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000237:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000237:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000237:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000237:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000237:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000237:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000237:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000237:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000237:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2315127	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000237:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315489	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000237;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000237;transcript_name=CHM13_chrY_T0000237;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000237:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286276	2315875	1000	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=CHM13_chrY_T0000238;Name=CD99P1
CHM13_chrY	CAT	exon	2286276	2286371	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000238:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000238:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000238:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000238:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000238:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000238:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000238:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000238:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000238:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296259	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000238:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296260	2296363	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000238:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000238:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000238:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000238:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000238:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000238:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315875	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000238;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000238;transcript_name=CHM13_chrY_T0000238;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000238:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286276	2315483	1000	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=CHM13_chrY_T0000239;Name=CD99P1
CHM13_chrY	CAT	exon	2286276	2286371	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000239:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000239:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000239:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000239:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000239:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000239:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000239:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295623	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000239:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295624	2295650	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000239:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000239:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000239:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000239:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000239:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000239:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000239:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000239:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000239;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000239;transcript_name=CHM13_chrY_T0000239;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000239:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286278	2315487	1000	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000240;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000240;gene_name=CD99P1;ID=CHM13_chrY_T0000240;Name=CD99P1
CHM13_chrY	CAT	exon	2286278	2286371	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000240;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000240;transcript_name=CHM13_chrY_T0000240;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000240:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2315127	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000240;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000240;transcript_name=CHM13_chrY_T0000240;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000240:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315487	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000240;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000240;transcript_name=CHM13_chrY_T0000240;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000240:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286283	2304183	1000	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=CHM13_chrY_T0000241;Name=CD99P1
CHM13_chrY	CAT	exon	2286283	2286371	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000241:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000241:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000241:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000241:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000241:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000241:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000241:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000241:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000241:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000241:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000241:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000241:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000241:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000241:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2304183	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000241;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000241;transcript_name=CHM13_chrY_T0000241;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000241:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286283	2295919	1000	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000242;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000242;gene_name=CD99P1;ID=CHM13_chrY_T0000242;Name=CD99P1
CHM13_chrY	CAT	exon	2286283	2286371	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000242;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000242;transcript_name=CHM13_chrY_T0000242;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000242:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2292682	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000242;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000242;transcript_name=CHM13_chrY_T0000242;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000242:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000242;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000242;transcript_name=CHM13_chrY_T0000242;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000242:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000242;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000242;transcript_name=CHM13_chrY_T0000242;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000242:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295919	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000242;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000242;transcript_name=CHM13_chrY_T0000242;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000242:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286283	2336079	1000	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=CHM13_chrY_T0000243;Name=CD99P1
CHM13_chrY	CAT	exon	2286283	2286371	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000243:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000243:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000243:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000243:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000243:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000243:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000243:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000243:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000243:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000243:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000243:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000243:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000243:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000243:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000243:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000243:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000243:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2335629	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000243:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2335630	2336079	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000243;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000243;transcript_name=CHM13_chrY_T0000243;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000243:9;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286283	2336111	1000	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=CHM13_chrY_T0000244;Name=CD99P1
CHM13_chrY	CAT	exon	2286283	2286371	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000244:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000244:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000244:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000244:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000244:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000244:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000244:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000244:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000244:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000244:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000244:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000244:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000244:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000244:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000244:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000244:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000244:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2335669	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000244:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2335670	2336111	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000244;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000244;transcript_name=CHM13_chrY_T0000244;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000244:9;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286283	2325311	1000	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=CHM13_chrY_T0000245;Name=CD99P1
CHM13_chrY	CAT	exon	2286283	2286371	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000245:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000245:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000245:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000245:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000245:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000245:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000245:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000245:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000245:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000245:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000245:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000245:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000245:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000245:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000245:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2324665	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000245:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2324666	2325311	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000245;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000245;transcript_name=CHM13_chrY_T0000245;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000245:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286283	2336079	1000	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=CHM13_chrY_T0000246;Name=CD99P1
CHM13_chrY	CAT	exon	2286283	2286371	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000246:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000246:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000246:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000246:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000246:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000246:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000246:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000246:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000246:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000246:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000246:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000246:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000246:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000246:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000246:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2335610	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000246:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2335611	2336079	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000246;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000246;transcript_name=CHM13_chrY_T0000246;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000246:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286283	2336078	1000	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=CHM13_chrY_T0000247;Name=CD99P1
CHM13_chrY	CAT	exon	2286283	2286371	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000247:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000247:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000247:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000247:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000247:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000247:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000247:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000247:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000247:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000247:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000247:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000247:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000247:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000247:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000247:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000247:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000247:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2335610	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000247:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2335611	2336078	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000247;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000247;transcript_name=CHM13_chrY_T0000247;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000247:9;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286283	2336110	1000	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=CHM13_chrY_T0000248;Name=CD99P1
CHM13_chrY	CAT	exon	2286283	2286371	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000248:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000248:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000248:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000248:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000248:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2295605	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000248:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000248:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000248:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000248:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000248:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000248:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000248:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000248:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000248:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000248:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2335669	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000248:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2335670	2336110	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000248;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000248;transcript_name=CHM13_chrY_T0000248;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000248:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286283	2343563	1000	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=CHM13_chrY_T0000249;Name=CD99P1
CHM13_chrY	CAT	exon	2286283	2286371	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000249:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000249:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000249:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000249:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000249:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000249:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000249:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000249:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000249:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000249:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000249:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000249:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000249:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000249:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000249:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2343042	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000249:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2343043	2343563	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000249;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000249;transcript_name=CHM13_chrY_T0000249;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000249:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286288	2335198	1000	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=CHM13_chrY_T0000250;Name=CD99P1
CHM13_chrY	CAT	exon	2286288	2286371	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000250:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000250:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000250:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000250:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000250:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000250:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000250:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000250:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000250:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000250:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000250:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000250:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000250:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000250:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000250:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000250:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000250:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2335047	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000250:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2335048	2335198	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000250;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000250;transcript_name=CHM13_chrY_T0000250;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000250:9;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286291	2315485	1000	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=CHM13_chrY_T0000251;Name=CD99P1
CHM13_chrY	CAT	exon	2286291	2286371	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000251:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000251:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000251:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000251:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000251:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000251:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000251:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000251:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000251:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000251:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000251:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300216	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000251:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300217	2300321	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000251:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000251:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000251:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000251:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315485	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000251;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000251;transcript_name=CHM13_chrY_T0000251;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000251:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286291	2315483	1000	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=CHM13_chrY_T0000252;Name=CD99P1
CHM13_chrY	CAT	exon	2286291	2286371	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000252;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000252:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000252;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000252:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000252;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000252:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2295605	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000252;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000252:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000252;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000252:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000252;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000252:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000252;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000252:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000252;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000252:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000252;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000252:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000252;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000252:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000252;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000252:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000252;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000252:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000252;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000252;transcript_name=CHM13_chrY_T0000252;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000252:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286293	2315483	1000	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000253;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000253;gene_name=CD99P1;ID=CHM13_chrY_T0000253;Name=CD99P1
CHM13_chrY	CAT	exon	2286293	2286371	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000253;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000253;transcript_name=CHM13_chrY_T0000253;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000253:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000253;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000253;transcript_name=CHM13_chrY_T0000253;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000253:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000253;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000253;transcript_name=CHM13_chrY_T0000253;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000253:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000253;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000253;transcript_name=CHM13_chrY_T0000253;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000253:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000253;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000253;transcript_name=CHM13_chrY_T0000253;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000253:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000253;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000253;transcript_name=CHM13_chrY_T0000253;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000253:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000253;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000253;transcript_name=CHM13_chrY_T0000253;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000253:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2315127	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000253;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000253;transcript_name=CHM13_chrY_T0000253;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000253:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000253;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000253;transcript_name=CHM13_chrY_T0000253;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000253:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286293	2315483	1000	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000254;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000254;gene_name=CD99P1;ID=CHM13_chrY_T0000254;Name=CD99P1
CHM13_chrY	CAT	exon	2286293	2286371	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000254;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000254;transcript_name=CHM13_chrY_T0000254;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000254:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000254;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000254;transcript_name=CHM13_chrY_T0000254;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000254:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000254;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000254;transcript_name=CHM13_chrY_T0000254;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000254:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000254;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000254;transcript_name=CHM13_chrY_T0000254;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000254:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000254;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000254;transcript_name=CHM13_chrY_T0000254;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000254:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2303469	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000254;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000254;transcript_name=CHM13_chrY_T0000254;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000254:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000254;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000254;transcript_name=CHM13_chrY_T0000254;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000254:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000254;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000254;transcript_name=CHM13_chrY_T0000254;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000254:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000254;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000254;transcript_name=CHM13_chrY_T0000254;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000254:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286293	2315483	1000	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=CHM13_chrY_T0000255;Name=CD99P1
CHM13_chrY	CAT	exon	2286293	2286371	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000255:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000255:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000255:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000255:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000255:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2295605	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000255:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000255:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000255:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000255:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300216	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000255:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300217	2300321	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000255:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000255:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000255:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000255:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000255;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000255;transcript_name=CHM13_chrY_T0000255;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000255:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286294	2334396	1000	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=CHM13_chrY_T0000256;Name=CD99P1
CHM13_chrY	CAT	exon	2286294	2286371	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000256:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000256:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000256:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000256:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000256:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000256:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000256:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000256:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000256:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000256:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000256:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000256:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000256:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000256:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000256:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2332193	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000256:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2332194	2334396	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000256;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000256;transcript_name=CHM13_chrY_T0000256;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000256:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286295	2315483	1000	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=CHM13_chrY_T0000257;Name=CD99P1
CHM13_chrY	CAT	exon	2286295	2286371	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000257:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000257:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000257:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000257:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000257:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000257:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000257:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295398	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000257:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295399	2295482	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000257:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295483	2295605	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000257:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000257:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000257:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000257:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000257:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000257:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000257:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000257:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000257:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000257;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000257;transcript_name=CHM13_chrY_T0000257;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000257:9;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286296	2315483	1000	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000258;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000258;gene_name=CD99P1;ID=CHM13_chrY_T0000258;Name=CD99P1
CHM13_chrY	CAT	exon	2286296	2286371	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000258;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000258;transcript_name=CHM13_chrY_T0000258;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000258:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000258;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000258;transcript_name=CHM13_chrY_T0000258;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000258:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000258;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000258;transcript_name=CHM13_chrY_T0000258;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000258:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000258;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000258;transcript_name=CHM13_chrY_T0000258;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000258:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000258;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000258;transcript_name=CHM13_chrY_T0000258;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000258:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2300252	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000258;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000258;transcript_name=CHM13_chrY_T0000258;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000258:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000258;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000258;transcript_name=CHM13_chrY_T0000258;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000258:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000258;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000258;transcript_name=CHM13_chrY_T0000258;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000258:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000258;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000258;transcript_name=CHM13_chrY_T0000258;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000258:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000258;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000258;transcript_name=CHM13_chrY_T0000258;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000258:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000258;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000258;transcript_name=CHM13_chrY_T0000258;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000258:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286296	2304156	1000	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=CHM13_chrY_T0000259;Name=CD99P1
CHM13_chrY	CAT	exon	2286296	2286371	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000259:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000259:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000259:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000259:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000259:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000259:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000259:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2294343	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000259:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2294344	2294453	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000259:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2294454	2295605	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000259:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000259:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000259:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000259:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000259:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000259:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000259:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000259:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2303976	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000259:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303977	2304156	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000259;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000259;transcript_name=CHM13_chrY_T0000259;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000259:9;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286296	2315481	1000	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=CHM13_chrY_T0000260;Name=CD99P1
CHM13_chrY	CAT	exon	2286296	2286371	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000260:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000260:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000260:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000260:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000260:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000260:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000260:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295398	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000260:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295399	2295482	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000260:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295483	2295605	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000260:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000260:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000260:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000260:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000260:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000260:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000260:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000260:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000260:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000260:9;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000260:9;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315481	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000260;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000260;transcript_name=CHM13_chrY_T0000260;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000260:10;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286311	2305700	1000	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=CHM13_chrY_T0000262;Name=CD99P1
CHM13_chrY	CAT	exon	2286311	2286371	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000262:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000262:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000262:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000262:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000262:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000262:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000262:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000262:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000262:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000262:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000262:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000262:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000262:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000262:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000262:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2305261	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000262:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2305262	2305700	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000262;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000262;transcript_name=CHM13_chrY_T0000262;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000262:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286311	2315483	1000	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=CHM13_chrY_T0000263;Name=CD99P1
CHM13_chrY	CAT	exon	2286311	2286371	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000263:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000263:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000263:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2295398	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000263:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295399	2295482	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000263:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295483	2295605	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000263:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000263:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000263:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000263:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000263:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000263:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000263:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000263:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000263:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000263:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000263:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000263;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000263;transcript_name=CHM13_chrY_T0000263;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000263:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286311	2289262	1000	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000264;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000264;gene_name=CD99P1;ID=CHM13_chrY_T0000264;Name=CD99P1
CHM13_chrY	CAT	exon	2286311	2286371	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000264;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000264;transcript_name=CHM13_chrY_T0000264;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000264:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000264;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000264;transcript_name=CHM13_chrY_T0000264;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000264:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000264;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000264;transcript_name=CHM13_chrY_T0000264;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000264:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000264;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000264;transcript_name=CHM13_chrY_T0000264;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000264:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289262	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000264;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000264;transcript_name=CHM13_chrY_T0000264;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000264:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286311	2315483	1000	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=CHM13_chrY_T0000265;Name=CD99P1
CHM13_chrY	CAT	exon	2286311	2286371	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000265:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000265:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000265:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2288981	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000265:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2288982	2289086	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000265:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000265:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000265:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000265:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000265:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000265:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000265:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000265:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000265:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000265:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000265:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000265:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000265;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000265;transcript_name=CHM13_chrY_T0000265;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000265:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286311	2315483	1000	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=CHM13_chrY_T0000266;Name=CD99P1
CHM13_chrY	CAT	exon	2286311	2286371	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000266:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000266:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000266:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000266:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000266:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000266:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292866	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000266:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292867	2295605	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000266:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000266:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000266:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000266:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000266:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000266:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000266:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000266:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000266:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000266;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000266;transcript_name=CHM13_chrY_T0000266;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000266:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286515	2300276	1000	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=CHM13_chrY_T0000267;Name=CD99P1
CHM13_chrY	CAT	exon	2286515	2286580	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000267;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000267:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286581	2287871	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000267;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000267:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000267;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000267:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000267;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000267:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000267;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000267:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000267;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000267:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000267;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000267:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000267;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000267:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000267;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000267:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000267;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000267:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000267;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000267:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000267;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000267:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300276	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000267;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000267;transcript_name=CHM13_chrY_T0000267;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000267:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286871	2315483	1000	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=CHM13_chrY_T0000268;Name=CD99P1
CHM13_chrY	CAT	exon	2286871	2287105	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000268:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287106	2287871	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000268:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000268:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000268:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000268:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000268:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000268:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000268:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000268:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000268:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000268:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000268:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000268:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000268:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000268:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000268:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000268:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000268:8;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000268;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000268;transcript_name=CHM13_chrY_T0000268;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000268:9;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2286910	2315476	1000	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=CHM13_chrY_T0000269;Name=CD99P1
CHM13_chrY	CAT	exon	2286910	2287105	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000269:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287106	2287871	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000269:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000269:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000269:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000269:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2295605	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000269:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000269:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000269:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000269:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300216	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000269:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300217	2300321	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000269:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000269:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000269:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000269:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315476	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000269;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000269;transcript_name=CHM13_chrY_T0000269;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000269:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2287242	2315487	1000	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=CHM13_chrY_T0000270;Name=CD99P1
CHM13_chrY	CAT	exon	2287242	2287914	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000270:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000270:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000270:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000270:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000270:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000270:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000270:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000270:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000270:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000270:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000270:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000270:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000270:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000270:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315487	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000270;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000270;transcript_name=CHM13_chrY_T0000270;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000270:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2291930	2315490	1000	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=CHM13_chrY_T0000272;Name=CD99P1
CHM13_chrY	CAT	exon	2291930	2291994	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000272;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000272:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2291995	2292682	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000272;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000272:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000272;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000272:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000272;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000272:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000272;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000272:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000272;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000272:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000272;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000272:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000272;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000272:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000272;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000272:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000272;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000272:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000272;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000272:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000272;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000272:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315490	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000272;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000272;transcript_name=CHM13_chrY_T0000272;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000272:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2291935	2315483	1000	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=CHM13_chrY_T0000273;Name=CD99P1
CHM13_chrY	CAT	exon	2291935	2291994	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000273:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2291995	2292682	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000273:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000273:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000273:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000273:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000273:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000273:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000273:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000273:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000273:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000273:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000273:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000273:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000273:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000273;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000273;transcript_name=CHM13_chrY_T0000273;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000273:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2291954	2315489	1000	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=CHM13_chrY_T0000274;Name=CD99P1
CHM13_chrY	CAT	exon	2291954	2291994	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000274;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000274:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2291995	2292682	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000274;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000274:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292866	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000274;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000274:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292867	2295605	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000274;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000274:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000274;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000274:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000274;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000274:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000274;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000274:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000274;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000274:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000274;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000274:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000274;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000274:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000274;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000274:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000274;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000274:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315489	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000274;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000274;transcript_name=CHM13_chrY_T0000274;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000274:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2293486	2315848	1000	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000275;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000275;gene_name=CD99P1;ID=CHM13_chrY_T0000275;Name=CD99P1
CHM13_chrY	CAT	exon	2293486	2295650	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000275;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000275;transcript_name=CHM13_chrY_T0000275;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000275:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000275;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000275;transcript_name=CHM13_chrY_T0000275;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000275:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000275;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000275;transcript_name=CHM13_chrY_T0000275;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000275:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000275;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000275;transcript_name=CHM13_chrY_T0000275;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000275:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000275;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000275;transcript_name=CHM13_chrY_T0000275;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000275:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000275;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000275;transcript_name=CHM13_chrY_T0000275;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000275:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000275;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000275;transcript_name=CHM13_chrY_T0000275;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000275:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000275;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000275;transcript_name=CHM13_chrY_T0000275;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000275:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315848	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000275;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000275;transcript_name=CHM13_chrY_T0000275;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000275:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2295566	2315483	1000	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000276;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000276;gene_name=CD99P1;ID=CHM13_chrY_T0000276;Name=CD99P1
CHM13_chrY	CAT	exon	2295566	2295650	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000276;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000276;transcript_name=CHM13_chrY_T0000276;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000276:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000276;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000276;transcript_name=CHM13_chrY_T0000276;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000276:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000276;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000276;transcript_name=CHM13_chrY_T0000276;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000276:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000276;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000276;transcript_name=CHM13_chrY_T0000276;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000276:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000276;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000276;transcript_name=CHM13_chrY_T0000276;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000276:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000276;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000276;transcript_name=CHM13_chrY_T0000276;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000276:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000276;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000276;transcript_name=CHM13_chrY_T0000276;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000276:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000276;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000276;transcript_name=CHM13_chrY_T0000276;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000276:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000276;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000276;transcript_name=CHM13_chrY_T0000276;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000276:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000276;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000276;transcript_name=CHM13_chrY_T0000276;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000276:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000276;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000276;transcript_name=CHM13_chrY_T0000276;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000276:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2295591	2336100	1000	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000277;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000277;gene_name=CD99P1;ID=CHM13_chrY_T0000277;Name=CD99P1
CHM13_chrY	CAT	exon	2295591	2295650	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000277;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000277;transcript_name=CHM13_chrY_T0000277;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000277:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000277;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000277;transcript_name=CHM13_chrY_T0000277;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000277:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000277;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000277;transcript_name=CHM13_chrY_T0000277;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000277:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2300252	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000277;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000277;transcript_name=CHM13_chrY_T0000277;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000277:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000277;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000277;transcript_name=CHM13_chrY_T0000277;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000277:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2300322	2303469	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000277;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000277;transcript_name=CHM13_chrY_T0000277;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000277:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000277;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000277;transcript_name=CHM13_chrY_T0000277;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000277:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2335669	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000277;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000277;transcript_name=CHM13_chrY_T0000277;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000277:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2335670	2336100	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000277;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000277;transcript_name=CHM13_chrY_T0000277;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000277:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2295629	2315483	1000	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000278;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_G0000047;transcript_name=CHM13_chrY_T0000278;gene_name=CD99P1;ID=CHM13_chrY_T0000278;Name=CD99P1
CHM13_chrY	CAT	exon	2295629	2295650	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000278;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000278;transcript_name=CHM13_chrY_T0000278;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000278:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000278;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000278;transcript_name=CHM13_chrY_T0000278;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000278:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000278;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000278;transcript_name=CHM13_chrY_T0000278;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000278:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2303469	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000278;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000278;transcript_name=CHM13_chrY_T0000278;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000278:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2303470	2303515	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000278;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000278;transcript_name=CHM13_chrY_T0000278;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000278:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2303516	2315127	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000278;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000278;transcript_name=CHM13_chrY_T0000278;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000278:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2315128	2315483	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000278;gene_id=CHM13_chrY_G0000047;Parent=CHM13_chrY_T0000278;transcript_name=CHM13_chrY_T0000278;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000278:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2286093	2286156	.	+	.	source_gene_common_name=MIR6089;source_gene=ENSG00000292346.1;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;gene_id=CHM13_chrY_G0000048;gene_biotype=miRNA;gene_name=MIR6089;gene_sources=liftoff;ID=CHM13_chrY_G0000048;Name=MIR6089
CHM13_chrY	CAT	transcript	2286093	2286156	1000	+	.	source_transcript=ENST00000711167.1;source_transcript_name=MIR6089-202;source_gene=ENSG00000292346.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292346.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711167.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711167.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;transcript_id=CHM13_chrY_T0000225;gene_id=CHM13_chrY_G0000048;Parent=CHM13_chrY_G0000048;transcript_name=CHM13_chrY_T0000225;gene_name=MIR6089;ID=CHM13_chrY_T0000225;Name=MIR6089
CHM13_chrY	CAT	exon	2286093	2286156	.	+	.	source_transcript=ENST00000711167.1;source_transcript_name=MIR6089-202;source_gene=ENSG00000292346.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292346.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711167.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711167.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;transcript_id=CHM13_chrY_T0000225;gene_id=CHM13_chrY_G0000048;Parent=CHM13_chrY_T0000225;transcript_name=CHM13_chrY_T0000225;gene_name=MIR6089;ID=exon:CHM13_chrY_T0000225:0;Name=MIR6089;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2286306	2300321	.	+	.	source_gene_common_name=CD99P1;source_gene=ENSG00000292361.1;gene_id=CHM13_chrY_G0000049;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=CD99P1;gene_sources=liftoff;ID=CHM13_chrY_G0000049;Name=CD99P1
CHM13_chrY	CAT	transcript	2286306	2300321	1000	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_G0000049;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=CHM13_chrY_T0000261;Name=CD99P1
CHM13_chrY	CAT	exon	2286306	2286371	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000261:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2286372	2287871	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000261:0;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2287872	2287914	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000261:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2287915	2289017	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000261:1;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2289018	2289086	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000261:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2289087	2292682	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000261:2;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2292683	2292836	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000261:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2292837	2295605	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000261:3;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2295606	2295650	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000261:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2295651	2296294	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000261:4;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2296295	2296363	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000261:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2296364	2299557	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000261:5;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2299558	2299602	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000261:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2299603	2300252	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=intron:CHM13_chrY_T0000261:6;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2300253	2300321	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=CHM13_chrY_T0000261;gene_id=CHM13_chrY_G0000049;Parent=CHM13_chrY_T0000261;transcript_name=CHM13_chrY_T0000261;gene_name=CD99P1;ID=exon:CHM13_chrY_T0000261:7;Name=CD99P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2289856	2292214	.	-	.	source_gene_common_name=LINC00102;source_gene=ENSG00000292347.1;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;gene_id=CHM13_chrY_G0000050;gene_biotype=lncRNA;gene_name=LINC00102;gene_sources=liftoff;ID=CHM13_chrY_G0000050;Name=LINC00102
CHM13_chrY	CAT	transcript	2289856	2292214	1000	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=CHM13_chrY_T0000271;gene_id=CHM13_chrY_G0000050;Parent=CHM13_chrY_G0000050;transcript_name=CHM13_chrY_T0000271;gene_name=LINC00102;ID=CHM13_chrY_T0000271;Name=LINC00102
CHM13_chrY	CAT	exon	2289856	2290564	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=CHM13_chrY_T0000271;gene_id=CHM13_chrY_G0000050;Parent=CHM13_chrY_T0000271;transcript_name=CHM13_chrY_T0000271;gene_name=LINC00102;ID=exon:CHM13_chrY_T0000271:0;Name=LINC00102;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2290565	2291583	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=CHM13_chrY_T0000271;gene_id=CHM13_chrY_G0000050;Parent=CHM13_chrY_T0000271;transcript_name=CHM13_chrY_T0000271;gene_name=LINC00102;ID=intron:CHM13_chrY_T0000271:0;Name=LINC00102;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2291584	2292214	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=CHM13_chrY_T0000271;gene_id=CHM13_chrY_G0000050;Parent=CHM13_chrY_T0000271;transcript_name=CHM13_chrY_T0000271;gene_name=LINC00102;ID=exon:CHM13_chrY_T0000271:1;Name=LINC00102;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2368144	2418268	.	+	.	source_gene_common_name=CD99;source_gene=ENSG00000292348.1;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;gene_id=CHM13_chrY_G0000051;gene_biotype=protein_coding;gene_name=CD99;gene_sources=liftoff;ID=CHM13_chrY_G0000051;Name=CD99
CHM13_chrY	CAT	transcript	2368144	2418259	100	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=CHM13_chrY_T0000279;Name=CD99
CHM13_chrY	CAT	exon	2368144	2368384	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=exon:CHM13_chrY_T0000279:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2368318	2368384	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=CDS:CHM13_chrY_T0000279:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2368318	2368320	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=start_codon:CHM13_chrY_T0000279;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2368385	2391384	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=intron:CHM13_chrY_T0000279:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2391385	2391417	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=exon:CHM13_chrY_T0000279:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2391385	2391417	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=CDS:CHM13_chrY_T0000279:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2391418	2394571	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=intron:CHM13_chrY_T0000279:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2394572	2394619	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=exon:CHM13_chrY_T0000279:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2394572	2394619	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=CDS:CHM13_chrY_T0000279:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2394620	2396625	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=intron:CHM13_chrY_T0000279:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2396626	2396670	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=exon:CHM13_chrY_T0000279:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2396626	2396670	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=CDS:CHM13_chrY_T0000279:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2396671	2397320	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=intron:CHM13_chrY_T0000279:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2397321	2397389	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=exon:CHM13_chrY_T0000279:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2397321	2397389	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=CDS:CHM13_chrY_T0000279:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2397390	2399593	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=intron:CHM13_chrY_T0000279:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2399594	2399641	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=exon:CHM13_chrY_T0000279:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2399594	2399641	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=CDS:CHM13_chrY_T0000279:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2399642	2400280	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=intron:CHM13_chrY_T0000279:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2400281	2400331	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=exon:CHM13_chrY_T0000279:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2400281	2400331	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=CDS:CHM13_chrY_T0000279:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2400332	2403226	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=intron:CHM13_chrY_T0000279:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2403227	2403340	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=exon:CHM13_chrY_T0000279:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2403227	2403340	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=CDS:CHM13_chrY_T0000279:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2403341	2410317	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=intron:CHM13_chrY_T0000279:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2410318	2410335	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=exon:CHM13_chrY_T0000279:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2410318	2410325	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=CDS:CHM13_chrY_T0000279:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2410323	2410325	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=stop_codon:CHM13_chrY_T0000279;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2410336	2415160	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=intron:CHM13_chrY_T0000279:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2415161	2415214	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=exon:CHM13_chrY_T0000279:9;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2415215	2417737	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=intron:CHM13_chrY_T0000279:9;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2417738	2418259	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=CHM13_chrY_T0000279;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000279;transcript_name=CHM13_chrY_T0000279;gene_name=CD99;ID=exon:CHM13_chrY_T0000279:10;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2368233	2418060	100	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=CHM13_chrY_T0000280;Name=CD99
CHM13_chrY	CAT	exon	2368233	2368384	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=exon:CHM13_chrY_T0000280:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2368318	2368384	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=CDS:CHM13_chrY_T0000280:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2368318	2368320	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=start_codon:CHM13_chrY_T0000280;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2368385	2391384	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=intron:CHM13_chrY_T0000280:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2391385	2391417	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=exon:CHM13_chrY_T0000280:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2391385	2391417	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=CDS:CHM13_chrY_T0000280:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2391418	2396625	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=intron:CHM13_chrY_T0000280:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2396626	2396670	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=exon:CHM13_chrY_T0000280:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2396626	2396670	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=CDS:CHM13_chrY_T0000280:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2396671	2397320	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=intron:CHM13_chrY_T0000280:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2397321	2397389	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=exon:CHM13_chrY_T0000280:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2397321	2397389	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=CDS:CHM13_chrY_T0000280:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2397390	2399593	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=intron:CHM13_chrY_T0000280:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2399594	2399641	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=exon:CHM13_chrY_T0000280:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2399594	2399641	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=CDS:CHM13_chrY_T0000280:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2399642	2400280	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=intron:CHM13_chrY_T0000280:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2400281	2400331	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=exon:CHM13_chrY_T0000280:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2400281	2400331	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=CDS:CHM13_chrY_T0000280:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2400332	2403226	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=intron:CHM13_chrY_T0000280:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2403227	2403340	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=exon:CHM13_chrY_T0000280:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2403227	2403340	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=CDS:CHM13_chrY_T0000280:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2403341	2415157	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=intron:CHM13_chrY_T0000280:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2415158	2415214	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=exon:CHM13_chrY_T0000280:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2415158	2415214	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=CDS:CHM13_chrY_T0000280:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2415215	2417737	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=intron:CHM13_chrY_T0000280:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2417738	2418060	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=exon:CHM13_chrY_T0000280:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2417738	2417763	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=CDS:CHM13_chrY_T0000280:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2417761	2417763	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=CHM13_chrY_T0000280;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000280;transcript_name=CHM13_chrY_T0000280;gene_name=CD99;ID=stop_codon:CHM13_chrY_T0000280;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2368237	2410628	100	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=CHM13_chrY_T0000281;Name=CD99
CHM13_chrY	CAT	exon	2368237	2368384	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=exon:CHM13_chrY_T0000281:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2368318	2368384	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=CDS:CHM13_chrY_T0000281:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2368318	2368320	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=start_codon:CHM13_chrY_T0000281;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2368385	2391384	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=intron:CHM13_chrY_T0000281:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2391385	2391417	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=exon:CHM13_chrY_T0000281:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2391385	2391417	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=CDS:CHM13_chrY_T0000281:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2391418	2394571	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=intron:CHM13_chrY_T0000281:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2394572	2394619	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=exon:CHM13_chrY_T0000281:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2394572	2394619	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=CDS:CHM13_chrY_T0000281:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2394620	2396625	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=intron:CHM13_chrY_T0000281:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2396626	2396670	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=exon:CHM13_chrY_T0000281:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2396626	2396670	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=CDS:CHM13_chrY_T0000281:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2396671	2397320	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=intron:CHM13_chrY_T0000281:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2397321	2397389	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=exon:CHM13_chrY_T0000281:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2397321	2397389	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=CDS:CHM13_chrY_T0000281:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2397390	2399593	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=intron:CHM13_chrY_T0000281:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2399594	2399641	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=exon:CHM13_chrY_T0000281:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2399594	2399641	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=CDS:CHM13_chrY_T0000281:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2399642	2400280	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=intron:CHM13_chrY_T0000281:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2400281	2400331	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=exon:CHM13_chrY_T0000281:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2400281	2400331	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=CDS:CHM13_chrY_T0000281:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2400332	2403226	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=intron:CHM13_chrY_T0000281:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2403227	2403340	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=exon:CHM13_chrY_T0000281:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2403227	2403340	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=CDS:CHM13_chrY_T0000281:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2403341	2404259	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=intron:CHM13_chrY_T0000281:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2404260	2404310	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=exon:CHM13_chrY_T0000281:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2404260	2404310	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=CDS:CHM13_chrY_T0000281:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2404311	2410317	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=intron:CHM13_chrY_T0000281:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2410318	2410628	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=exon:CHM13_chrY_T0000281:9;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2410318	2410325	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=CDS:CHM13_chrY_T0000281:9;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2410323	2410325	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=CHM13_chrY_T0000281;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000281;transcript_name=CHM13_chrY_T0000281;gene_name=CD99;ID=stop_codon:CHM13_chrY_T0000281;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2368249	2394982	1000	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=CHM13_chrY_T0000282;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000282;gene_name=CD99;ID=CHM13_chrY_T0000282;Name=CD99
CHM13_chrY	CAT	exon	2368249	2368384	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=CHM13_chrY_T0000282;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000282;transcript_name=CHM13_chrY_T0000282;gene_name=CD99;ID=exon:CHM13_chrY_T0000282:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2368385	2391384	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=CHM13_chrY_T0000282;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000282;transcript_name=CHM13_chrY_T0000282;gene_name=CD99;ID=intron:CHM13_chrY_T0000282:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2391385	2391417	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=CHM13_chrY_T0000282;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000282;transcript_name=CHM13_chrY_T0000282;gene_name=CD99;ID=exon:CHM13_chrY_T0000282:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2391418	2394571	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=CHM13_chrY_T0000282;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000282;transcript_name=CHM13_chrY_T0000282;gene_name=CD99;ID=intron:CHM13_chrY_T0000282:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2394572	2394982	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=CHM13_chrY_T0000282;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000282;transcript_name=CHM13_chrY_T0000282;gene_name=CD99;ID=exon:CHM13_chrY_T0000282:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2368252	2418268	100	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=CHM13_chrY_T0000283;Name=CD99
CHM13_chrY	CAT	exon	2368252	2368384	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=exon:CHM13_chrY_T0000283:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2368318	2368384	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=CDS:CHM13_chrY_T0000283:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2368318	2368320	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=start_codon:CHM13_chrY_T0000283;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2368385	2391384	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=intron:CHM13_chrY_T0000283:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2391385	2391417	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=exon:CHM13_chrY_T0000283:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2391385	2391417	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=CDS:CHM13_chrY_T0000283:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2391418	2394571	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=intron:CHM13_chrY_T0000283:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2394572	2394619	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=exon:CHM13_chrY_T0000283:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2394572	2394619	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=CDS:CHM13_chrY_T0000283:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2394620	2396625	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=intron:CHM13_chrY_T0000283:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2396626	2396670	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=exon:CHM13_chrY_T0000283:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2396626	2396670	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=CDS:CHM13_chrY_T0000283:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2396671	2397320	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=intron:CHM13_chrY_T0000283:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2397321	2397389	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=exon:CHM13_chrY_T0000283:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2397321	2397389	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=CDS:CHM13_chrY_T0000283:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2397390	2399593	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=intron:CHM13_chrY_T0000283:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2399594	2399641	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=exon:CHM13_chrY_T0000283:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2399594	2399641	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=CDS:CHM13_chrY_T0000283:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2399642	2400280	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=intron:CHM13_chrY_T0000283:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2400281	2400331	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=exon:CHM13_chrY_T0000283:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2400281	2400331	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=CDS:CHM13_chrY_T0000283:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2400332	2403226	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=intron:CHM13_chrY_T0000283:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2403227	2403340	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=exon:CHM13_chrY_T0000283:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2403227	2403340	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=CDS:CHM13_chrY_T0000283:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2403341	2415157	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=intron:CHM13_chrY_T0000283:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2415158	2415214	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=exon:CHM13_chrY_T0000283:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2415158	2415214	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=CDS:CHM13_chrY_T0000283:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2415215	2417737	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=intron:CHM13_chrY_T0000283:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2417738	2418268	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=exon:CHM13_chrY_T0000283:9;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2417738	2417763	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=CDS:CHM13_chrY_T0000283:9;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2417761	2417763	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=CHM13_chrY_T0000283;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000283;transcript_name=CHM13_chrY_T0000283;gene_name=CD99;ID=stop_codon:CHM13_chrY_T0000283;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2368252	2400401	1000	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=CHM13_chrY_T0000284;Name=CD99
CHM13_chrY	CAT	exon	2368252	2368384	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000284;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=exon:CHM13_chrY_T0000284:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2368385	2391384	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000284;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=intron:CHM13_chrY_T0000284:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2391385	2391417	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000284;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=exon:CHM13_chrY_T0000284:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2391418	2394571	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000284;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=intron:CHM13_chrY_T0000284:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2394572	2394619	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000284;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=exon:CHM13_chrY_T0000284:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2394620	2396625	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000284;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=intron:CHM13_chrY_T0000284:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2396626	2396670	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000284;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=exon:CHM13_chrY_T0000284:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2396671	2397320	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000284;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=intron:CHM13_chrY_T0000284:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2397321	2397389	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000284;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=exon:CHM13_chrY_T0000284:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2397390	2399593	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000284;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=intron:CHM13_chrY_T0000284:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2399594	2399641	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000284;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=exon:CHM13_chrY_T0000284:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2399642	2400280	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000284;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=intron:CHM13_chrY_T0000284:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2400281	2400401	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=CHM13_chrY_T0000284;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000284;transcript_name=CHM13_chrY_T0000284;gene_name=CD99;ID=exon:CHM13_chrY_T0000284:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2368267	2410633	100	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=CHM13_chrY_T0000285;Name=CD99
CHM13_chrY	CAT	exon	2368267	2368384	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=exon:CHM13_chrY_T0000285:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2368318	2368384	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=CDS:CHM13_chrY_T0000285:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2368318	2368320	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=start_codon:CHM13_chrY_T0000285;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2368385	2391384	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=intron:CHM13_chrY_T0000285:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2391385	2391417	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=exon:CHM13_chrY_T0000285:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2391385	2391417	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=CDS:CHM13_chrY_T0000285:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2391418	2394571	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=intron:CHM13_chrY_T0000285:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2394572	2394619	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=exon:CHM13_chrY_T0000285:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2394572	2394619	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=CDS:CHM13_chrY_T0000285:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2394620	2396625	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=intron:CHM13_chrY_T0000285:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2396626	2396670	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=exon:CHM13_chrY_T0000285:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2396626	2396670	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=CDS:CHM13_chrY_T0000285:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2396671	2397320	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=intron:CHM13_chrY_T0000285:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2397321	2397389	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=exon:CHM13_chrY_T0000285:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2397321	2397389	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=CDS:CHM13_chrY_T0000285:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2397390	2399593	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=intron:CHM13_chrY_T0000285:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2399594	2399641	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=exon:CHM13_chrY_T0000285:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2399594	2399641	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=CDS:CHM13_chrY_T0000285:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2399642	2400280	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=intron:CHM13_chrY_T0000285:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2400281	2400331	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=exon:CHM13_chrY_T0000285:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2400281	2400331	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=CDS:CHM13_chrY_T0000285:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2400332	2403226	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=intron:CHM13_chrY_T0000285:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2403227	2403340	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=exon:CHM13_chrY_T0000285:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2403227	2403340	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=CDS:CHM13_chrY_T0000285:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2403341	2410317	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=intron:CHM13_chrY_T0000285:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2410318	2410633	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=exon:CHM13_chrY_T0000285:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2410318	2410325	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=CDS:CHM13_chrY_T0000285:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2410323	2410325	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=CHM13_chrY_T0000285;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000285;transcript_name=CHM13_chrY_T0000285;gene_name=CD99;ID=stop_codon:CHM13_chrY_T0000285;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2368270	2418249	100	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=CHM13_chrY_T0000286;Name=CD99
CHM13_chrY	CAT	exon	2368270	2368384	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=exon:CHM13_chrY_T0000286:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2368318	2368384	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=CDS:CHM13_chrY_T0000286:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2368318	2368320	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=start_codon:CHM13_chrY_T0000286;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2368385	2391384	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=intron:CHM13_chrY_T0000286:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2391385	2391417	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=exon:CHM13_chrY_T0000286:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2391385	2391417	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=CDS:CHM13_chrY_T0000286:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2391418	2394571	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=intron:CHM13_chrY_T0000286:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2394572	2394619	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=exon:CHM13_chrY_T0000286:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2394572	2394619	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=CDS:CHM13_chrY_T0000286:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2394620	2396625	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=intron:CHM13_chrY_T0000286:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2396626	2396670	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=exon:CHM13_chrY_T0000286:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2396626	2396670	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=CDS:CHM13_chrY_T0000286:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2396671	2397320	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=intron:CHM13_chrY_T0000286:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2397321	2397389	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=exon:CHM13_chrY_T0000286:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2397321	2397389	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=CDS:CHM13_chrY_T0000286:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2397390	2399593	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=intron:CHM13_chrY_T0000286:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2399594	2399641	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=exon:CHM13_chrY_T0000286:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2399594	2399641	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=CDS:CHM13_chrY_T0000286:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2399642	2400280	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=intron:CHM13_chrY_T0000286:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2400281	2400331	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=exon:CHM13_chrY_T0000286:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2400281	2400331	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=CDS:CHM13_chrY_T0000286:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2400332	2403226	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=intron:CHM13_chrY_T0000286:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2403227	2403340	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=exon:CHM13_chrY_T0000286:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2403227	2403340	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=CDS:CHM13_chrY_T0000286:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2403341	2415160	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=intron:CHM13_chrY_T0000286:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2415161	2415214	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=exon:CHM13_chrY_T0000286:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2415161	2415214	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=CDS:CHM13_chrY_T0000286:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2415215	2417737	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=intron:CHM13_chrY_T0000286:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2417738	2418249	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=exon:CHM13_chrY_T0000286:9;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2417738	2417763	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=CDS:CHM13_chrY_T0000286:9;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2417761	2417763	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=CHM13_chrY_T0000286;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000286;transcript_name=CHM13_chrY_T0000286;gene_name=CD99;ID=stop_codon:CHM13_chrY_T0000286;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2368283	2392561	1000	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.844;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=CHM13_chrY_T0000287;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000287;gene_name=CD99;ID=CHM13_chrY_T0000287;Name=CD99
CHM13_chrY	CAT	exon	2368283	2368384	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=CHM13_chrY_T0000287;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000287;transcript_name=CHM13_chrY_T0000287;gene_name=CD99;ID=exon:CHM13_chrY_T0000287:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2368385	2391384	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=CHM13_chrY_T0000287;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000287;transcript_name=CHM13_chrY_T0000287;gene_name=CD99;ID=intron:CHM13_chrY_T0000287:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2391385	2392561	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=CHM13_chrY_T0000287;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000287;transcript_name=CHM13_chrY_T0000287;gene_name=CD99;ID=exon:CHM13_chrY_T0000287:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2368318	2369210	100	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=CHM13_chrY_T0000288;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000288;gene_name=CD99;ID=CHM13_chrY_T0000288;Name=CD99
CHM13_chrY	CAT	exon	2368318	2368384	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=CHM13_chrY_T0000288;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000288;transcript_name=CHM13_chrY_T0000288;gene_name=CD99;ID=exon:CHM13_chrY_T0000288:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2368318	2368384	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=CHM13_chrY_T0000288;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000288;transcript_name=CHM13_chrY_T0000288;gene_name=CD99;ID=CDS:CHM13_chrY_T0000288:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2368318	2368320	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=CHM13_chrY_T0000288;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000288;transcript_name=CHM13_chrY_T0000288;gene_name=CD99;ID=start_codon:CHM13_chrY_T0000288;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2368385	2368744	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=CHM13_chrY_T0000288;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000288;transcript_name=CHM13_chrY_T0000288;gene_name=CD99;ID=intron:CHM13_chrY_T0000288:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2368745	2369210	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=CHM13_chrY_T0000288;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000288;transcript_name=CHM13_chrY_T0000288;gene_name=CD99;ID=exon:CHM13_chrY_T0000288:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2368745	2368908	.	+	2	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=CHM13_chrY_T0000288;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000288;transcript_name=CHM13_chrY_T0000288;gene_name=CD99;ID=CDS:CHM13_chrY_T0000288:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2368906	2368908	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=CHM13_chrY_T0000288;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000288;transcript_name=CHM13_chrY_T0000288;gene_name=CD99;ID=stop_codon:CHM13_chrY_T0000288;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2368318	2417763	1000	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=CHM13_chrY_T0000289;Name=CD99
CHM13_chrY	CAT	exon	2368318	2368384	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=exon:CHM13_chrY_T0000289:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2368318	2368384	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=CDS:CHM13_chrY_T0000289:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2368318	2368320	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=start_codon:CHM13_chrY_T0000289;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2368385	2391384	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=intron:CHM13_chrY_T0000289:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2391385	2391417	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=exon:CHM13_chrY_T0000289:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2391385	2391417	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=CDS:CHM13_chrY_T0000289:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2391418	2394571	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=intron:CHM13_chrY_T0000289:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2394572	2394619	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=exon:CHM13_chrY_T0000289:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2394572	2394619	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=CDS:CHM13_chrY_T0000289:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2394620	2396625	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=intron:CHM13_chrY_T0000289:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2396626	2396670	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=exon:CHM13_chrY_T0000289:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2396626	2396670	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=CDS:CHM13_chrY_T0000289:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2396671	2397320	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=intron:CHM13_chrY_T0000289:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2397321	2397389	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=exon:CHM13_chrY_T0000289:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2397321	2397389	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=CDS:CHM13_chrY_T0000289:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2397390	2399593	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=intron:CHM13_chrY_T0000289:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2399594	2399641	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=exon:CHM13_chrY_T0000289:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2399594	2399641	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=CDS:CHM13_chrY_T0000289:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2399642	2400280	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=intron:CHM13_chrY_T0000289:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2400281	2400331	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=exon:CHM13_chrY_T0000289:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2400281	2400331	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=CDS:CHM13_chrY_T0000289:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2400332	2403226	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=intron:CHM13_chrY_T0000289:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2403227	2403340	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=exon:CHM13_chrY_T0000289:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2403227	2403340	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=CDS:CHM13_chrY_T0000289:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2403341	2410317	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=intron:CHM13_chrY_T0000289:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2410318	2410335	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=exon:CHM13_chrY_T0000289:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2410318	2410325	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=CDS:CHM13_chrY_T0000289:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2410323	2410325	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=stop_codon:CHM13_chrY_T0000289;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2410336	2415160	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=intron:CHM13_chrY_T0000289:8;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2415161	2415214	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=exon:CHM13_chrY_T0000289:9;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2415215	2417737	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=intron:CHM13_chrY_T0000289:9;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2417738	2417763	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=CHM13_chrY_T0000289;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000289;transcript_name=CHM13_chrY_T0000289;gene_name=CD99;ID=exon:CHM13_chrY_T0000289:10;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2368457	2403340	1000	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=CHM13_chrY_T0000290;Name=CD99
CHM13_chrY	CAT	exon	2368457	2368652	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=exon:CHM13_chrY_T0000290:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2368653	2391384	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=intron:CHM13_chrY_T0000290:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2391385	2391417	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=exon:CHM13_chrY_T0000290:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2391418	2394571	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=intron:CHM13_chrY_T0000290:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2394572	2394619	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=exon:CHM13_chrY_T0000290:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2394620	2396625	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=intron:CHM13_chrY_T0000290:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2396626	2396670	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=exon:CHM13_chrY_T0000290:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2396671	2397320	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=intron:CHM13_chrY_T0000290:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2397321	2397389	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=exon:CHM13_chrY_T0000290:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2397390	2399593	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=intron:CHM13_chrY_T0000290:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2399594	2399641	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=exon:CHM13_chrY_T0000290:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2399642	2400280	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=intron:CHM13_chrY_T0000290:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2400281	2400331	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=exon:CHM13_chrY_T0000290:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2400332	2403226	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=intron:CHM13_chrY_T0000290:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2403227	2403340	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=CHM13_chrY_T0000290;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000290;transcript_name=CHM13_chrY_T0000290;gene_name=CD99;ID=exon:CHM13_chrY_T0000290:7;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2394341	2403330	1000	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=CHM13_chrY_T0000291;Name=CD99
CHM13_chrY	CAT	exon	2394341	2394441	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000291;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=exon:CHM13_chrY_T0000291:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2394442	2394571	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000291;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=intron:CHM13_chrY_T0000291:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2394572	2394619	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000291;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=exon:CHM13_chrY_T0000291:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2394620	2396625	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000291;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=intron:CHM13_chrY_T0000291:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2396626	2396670	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000291;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=exon:CHM13_chrY_T0000291:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2396671	2397320	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000291;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=intron:CHM13_chrY_T0000291:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2397321	2397389	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000291;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=exon:CHM13_chrY_T0000291:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2397390	2399593	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000291;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=intron:CHM13_chrY_T0000291:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2399594	2399641	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000291;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=exon:CHM13_chrY_T0000291:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2399642	2400280	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000291;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=intron:CHM13_chrY_T0000291:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2400281	2400331	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000291;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=exon:CHM13_chrY_T0000291:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2400332	2403226	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000291;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=intron:CHM13_chrY_T0000291:5;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2403227	2403330	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=CHM13_chrY_T0000291;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000291;transcript_name=CHM13_chrY_T0000291;gene_name=CD99;ID=exon:CHM13_chrY_T0000291:6;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2396032	2403235	1000	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=CHM13_chrY_T0000292;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000292;gene_name=CD99;ID=CHM13_chrY_T0000292;Name=CD99
CHM13_chrY	CAT	exon	2396032	2396670	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=CHM13_chrY_T0000292;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000292;transcript_name=CHM13_chrY_T0000292;gene_name=CD99;ID=exon:CHM13_chrY_T0000292:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2396671	2397320	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=CHM13_chrY_T0000292;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000292;transcript_name=CHM13_chrY_T0000292;gene_name=CD99;ID=intron:CHM13_chrY_T0000292:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2397321	2397389	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=CHM13_chrY_T0000292;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000292;transcript_name=CHM13_chrY_T0000292;gene_name=CD99;ID=exon:CHM13_chrY_T0000292:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2397390	2399593	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=CHM13_chrY_T0000292;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000292;transcript_name=CHM13_chrY_T0000292;gene_name=CD99;ID=intron:CHM13_chrY_T0000292:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2399594	2399641	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=CHM13_chrY_T0000292;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000292;transcript_name=CHM13_chrY_T0000292;gene_name=CD99;ID=exon:CHM13_chrY_T0000292:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2399642	2400280	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=CHM13_chrY_T0000292;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000292;transcript_name=CHM13_chrY_T0000292;gene_name=CD99;ID=intron:CHM13_chrY_T0000292:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2400281	2400331	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=CHM13_chrY_T0000292;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000292;transcript_name=CHM13_chrY_T0000292;gene_name=CD99;ID=exon:CHM13_chrY_T0000292:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2400332	2403226	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=CHM13_chrY_T0000292;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000292;transcript_name=CHM13_chrY_T0000292;gene_name=CD99;ID=intron:CHM13_chrY_T0000292:3;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2403227	2403235	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=CHM13_chrY_T0000292;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000292;transcript_name=CHM13_chrY_T0000292;gene_name=CD99;ID=exon:CHM13_chrY_T0000292:4;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2403308	2418084	1000	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=CHM13_chrY_T0000293;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_G0000051;transcript_name=CHM13_chrY_T0000293;gene_name=CD99;ID=CHM13_chrY_T0000293;Name=CD99
CHM13_chrY	CAT	exon	2403308	2403340	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=CHM13_chrY_T0000293;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000293;transcript_name=CHM13_chrY_T0000293;gene_name=CD99;ID=exon:CHM13_chrY_T0000293:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2403308	2403340	.	+	2	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=CHM13_chrY_T0000293;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000293;transcript_name=CHM13_chrY_T0000293;gene_name=CD99;ID=CDS:CHM13_chrY_T0000293:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2403341	2414838	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=CHM13_chrY_T0000293;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000293;transcript_name=CHM13_chrY_T0000293;gene_name=CD99;ID=intron:CHM13_chrY_T0000293:0;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2414839	2415214	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=CHM13_chrY_T0000293;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000293;transcript_name=CHM13_chrY_T0000293;gene_name=CD99;ID=exon:CHM13_chrY_T0000293:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2414839	2414873	.	+	2	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=CHM13_chrY_T0000293;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000293;transcript_name=CHM13_chrY_T0000293;gene_name=CD99;ID=CDS:CHM13_chrY_T0000293:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2414871	2414873	.	+	0	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=CHM13_chrY_T0000293;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000293;transcript_name=CHM13_chrY_T0000293;gene_name=CD99;ID=stop_codon:CHM13_chrY_T0000293;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2415215	2417737	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=CHM13_chrY_T0000293;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000293;transcript_name=CHM13_chrY_T0000293;gene_name=CD99;ID=intron:CHM13_chrY_T0000293:1;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2417738	2418084	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=CHM13_chrY_T0000293;gene_id=CHM13_chrY_G0000051;Parent=CHM13_chrY_T0000293;transcript_name=CHM13_chrY_T0000293;gene_name=CD99;ID=exon:CHM13_chrY_T0000293:2;Name=CD99;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2429084	2531473	.	+	.	source_gene_common_name=XGY2;source_gene=ENSG00000290840.2;gene_id=CHM13_chrY_G0000052;gene_biotype=lncRNA;gene_name=XGY2;gene_sources=liftoff;ID=CHM13_chrY_G0000052;Name=XGY2
CHM13_chrY	CAT	transcript	2429084	2467761	1000	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000294;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_G0000052;transcript_name=CHM13_chrY_T0000294;gene_name=XGY2;ID=CHM13_chrY_T0000294;Name=XGY2
CHM13_chrY	CAT	exon	2429084	2429336	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000294;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000294;transcript_name=CHM13_chrY_T0000294;gene_name=XGY2;ID=exon:CHM13_chrY_T0000294:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2429337	2447536	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000294;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000294;transcript_name=CHM13_chrY_T0000294;gene_name=XGY2;ID=intron:CHM13_chrY_T0000294:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2447537	2447578	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000294;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000294;transcript_name=CHM13_chrY_T0000294;gene_name=XGY2;ID=exon:CHM13_chrY_T0000294:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2447579	2451558	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000294;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000294;transcript_name=CHM13_chrY_T0000294;gene_name=XGY2;ID=intron:CHM13_chrY_T0000294:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2451559	2451582	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000294;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000294;transcript_name=CHM13_chrY_T0000294;gene_name=XGY2;ID=exon:CHM13_chrY_T0000294:2;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2451583	2466588	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000294;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000294;transcript_name=CHM13_chrY_T0000294;gene_name=XGY2;ID=intron:CHM13_chrY_T0000294:2;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2466589	2467761	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000294;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000294;transcript_name=CHM13_chrY_T0000294;gene_name=XGY2;ID=exon:CHM13_chrY_T0000294:3;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2429297	2522520	1000	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_G0000052;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=CHM13_chrY_T0000295;Name=XGY2
CHM13_chrY	CAT	exon	2429297	2429336	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000295;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=exon:CHM13_chrY_T0000295:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2429337	2447536	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000295;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=intron:CHM13_chrY_T0000295:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2447537	2447578	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000295;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=exon:CHM13_chrY_T0000295:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2447579	2451558	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000295;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=intron:CHM13_chrY_T0000295:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2451559	2451582	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000295;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=exon:CHM13_chrY_T0000295:2;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2451583	2518316	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000295;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=intron:CHM13_chrY_T0000295:2;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2518317	2518458	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000295;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=exon:CHM13_chrY_T0000295:3;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2518459	2518995	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000295;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=intron:CHM13_chrY_T0000295:3;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2518996	2519073	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000295;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=exon:CHM13_chrY_T0000295:4;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2519074	2520907	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000295;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=intron:CHM13_chrY_T0000295:4;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2520908	2521088	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000295;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=exon:CHM13_chrY_T0000295:5;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2521089	2522476	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000295;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=intron:CHM13_chrY_T0000295:5;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2522477	2522520	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000295;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000295;transcript_name=CHM13_chrY_T0000295;gene_name=XGY2;ID=exon:CHM13_chrY_T0000295:6;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2429297	2464474	1000	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000296;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_G0000052;transcript_name=CHM13_chrY_T0000296;gene_name=XGY2;ID=CHM13_chrY_T0000296;Name=XGY2
CHM13_chrY	CAT	exon	2429297	2429336	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000296;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000296;transcript_name=CHM13_chrY_T0000296;gene_name=XGY2;ID=exon:CHM13_chrY_T0000296:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2429337	2447536	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000296;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000296;transcript_name=CHM13_chrY_T0000296;gene_name=XGY2;ID=intron:CHM13_chrY_T0000296:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2447537	2447578	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000296;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000296;transcript_name=CHM13_chrY_T0000296;gene_name=XGY2;ID=exon:CHM13_chrY_T0000296:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2447579	2451558	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000296;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000296;transcript_name=CHM13_chrY_T0000296;gene_name=XGY2;ID=intron:CHM13_chrY_T0000296:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2451559	2451582	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000296;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000296;transcript_name=CHM13_chrY_T0000296;gene_name=XGY2;ID=exon:CHM13_chrY_T0000296:2;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2451583	2463834	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000296;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000296;transcript_name=CHM13_chrY_T0000296;gene_name=XGY2;ID=intron:CHM13_chrY_T0000296:2;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2463835	2463893	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000296;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000296;transcript_name=CHM13_chrY_T0000296;gene_name=XGY2;ID=exon:CHM13_chrY_T0000296:3;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2463894	2464319	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000296;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000296;transcript_name=CHM13_chrY_T0000296;gene_name=XGY2;ID=intron:CHM13_chrY_T0000296:3;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2464320	2464474	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000296;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000296;transcript_name=CHM13_chrY_T0000296;gene_name=XGY2;ID=exon:CHM13_chrY_T0000296:4;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2429297	2451839	1000	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000297;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_G0000052;transcript_name=CHM13_chrY_T0000297;gene_name=XGY2;ID=CHM13_chrY_T0000297;Name=XGY2
CHM13_chrY	CAT	exon	2429297	2429336	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000297;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000297;transcript_name=CHM13_chrY_T0000297;gene_name=XGY2;ID=exon:CHM13_chrY_T0000297:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2429337	2447536	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000297;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000297;transcript_name=CHM13_chrY_T0000297;gene_name=XGY2;ID=intron:CHM13_chrY_T0000297:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2447537	2447578	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000297;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000297;transcript_name=CHM13_chrY_T0000297;gene_name=XGY2;ID=exon:CHM13_chrY_T0000297:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2447579	2451558	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000297;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000297;transcript_name=CHM13_chrY_T0000297;gene_name=XGY2;ID=intron:CHM13_chrY_T0000297:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2451559	2451839	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000297;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000297;transcript_name=CHM13_chrY_T0000297;gene_name=XGY2;ID=exon:CHM13_chrY_T0000297:2;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2429297	2522520	1000	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_G0000052;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=CHM13_chrY_T0000298;Name=XGY2
CHM13_chrY	CAT	exon	2429297	2429336	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=exon:CHM13_chrY_T0000298:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2429337	2447536	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=intron:CHM13_chrY_T0000298:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2447537	2447578	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=exon:CHM13_chrY_T0000298:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2447579	2451558	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=intron:CHM13_chrY_T0000298:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2451559	2451582	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=exon:CHM13_chrY_T0000298:2;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2451583	2517858	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=intron:CHM13_chrY_T0000298:2;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2517859	2517914	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=exon:CHM13_chrY_T0000298:3;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2517915	2518316	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=intron:CHM13_chrY_T0000298:3;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2518317	2518458	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=exon:CHM13_chrY_T0000298:4;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2518459	2518995	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=intron:CHM13_chrY_T0000298:4;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2518996	2519073	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=exon:CHM13_chrY_T0000298:5;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2519074	2520907	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=intron:CHM13_chrY_T0000298:5;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2520908	2521088	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=exon:CHM13_chrY_T0000298:6;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2521089	2522476	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=intron:CHM13_chrY_T0000298:6;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2522477	2522520	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000298;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000298;transcript_name=CHM13_chrY_T0000298;gene_name=XGY2;ID=exon:CHM13_chrY_T0000298:7;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2429297	2464410	1000	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000299;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_G0000052;transcript_name=CHM13_chrY_T0000299;gene_name=XGY2;ID=CHM13_chrY_T0000299;Name=XGY2
CHM13_chrY	CAT	exon	2429297	2429336	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000299;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000299;transcript_name=CHM13_chrY_T0000299;gene_name=XGY2;ID=exon:CHM13_chrY_T0000299:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2429337	2447536	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000299;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000299;transcript_name=CHM13_chrY_T0000299;gene_name=XGY2;ID=intron:CHM13_chrY_T0000299:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2447537	2447578	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000299;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000299;transcript_name=CHM13_chrY_T0000299;gene_name=XGY2;ID=exon:CHM13_chrY_T0000299:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2447579	2451558	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000299;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000299;transcript_name=CHM13_chrY_T0000299;gene_name=XGY2;ID=intron:CHM13_chrY_T0000299:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2451559	2451582	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000299;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000299;transcript_name=CHM13_chrY_T0000299;gene_name=XGY2;ID=exon:CHM13_chrY_T0000299:2;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2451583	2463834	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000299;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000299;transcript_name=CHM13_chrY_T0000299;gene_name=XGY2;ID=intron:CHM13_chrY_T0000299:2;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2463835	2464410	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000299;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000299;transcript_name=CHM13_chrY_T0000299;gene_name=XGY2;ID=exon:CHM13_chrY_T0000299:3;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2429297	2531473	1000	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000300;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_G0000052;transcript_name=CHM13_chrY_T0000300;gene_name=XGY2;ID=CHM13_chrY_T0000300;Name=XGY2
CHM13_chrY	CAT	exon	2429297	2429336	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000300;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000300;transcript_name=CHM13_chrY_T0000300;gene_name=XGY2;ID=exon:CHM13_chrY_T0000300:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2429337	2447536	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000300;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000300;transcript_name=CHM13_chrY_T0000300;gene_name=XGY2;ID=intron:CHM13_chrY_T0000300:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2447537	2447578	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000300;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000300;transcript_name=CHM13_chrY_T0000300;gene_name=XGY2;ID=exon:CHM13_chrY_T0000300:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2447579	2451558	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000300;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000300;transcript_name=CHM13_chrY_T0000300;gene_name=XGY2;ID=intron:CHM13_chrY_T0000300:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2451559	2451582	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000300;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000300;transcript_name=CHM13_chrY_T0000300;gene_name=XGY2;ID=exon:CHM13_chrY_T0000300:2;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2451583	2522476	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000300;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000300;transcript_name=CHM13_chrY_T0000300;gene_name=XGY2;ID=intron:CHM13_chrY_T0000300:2;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2522477	2522574	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000300;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000300;transcript_name=CHM13_chrY_T0000300;gene_name=XGY2;ID=exon:CHM13_chrY_T0000300:3;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2522575	2531431	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000300;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000300;transcript_name=CHM13_chrY_T0000300;gene_name=XGY2;ID=intron:CHM13_chrY_T0000300:3;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2531432	2531473	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000300;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000300;transcript_name=CHM13_chrY_T0000300;gene_name=XGY2;ID=exon:CHM13_chrY_T0000300:4;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2463835	2467602	1000	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000304;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_G0000052;transcript_name=CHM13_chrY_T0000304;gene_name=XGY2;ID=CHM13_chrY_T0000304;Name=XGY2
CHM13_chrY	CAT	exon	2463835	2463893	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000304;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000304;transcript_name=CHM13_chrY_T0000304;gene_name=XGY2;ID=exon:CHM13_chrY_T0000304:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2463894	2466588	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000304;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000304;transcript_name=CHM13_chrY_T0000304;gene_name=XGY2;ID=intron:CHM13_chrY_T0000304:0;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2466589	2467602	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=CHM13_chrY_T0000304;gene_id=CHM13_chrY_G0000052;Parent=CHM13_chrY_T0000304;transcript_name=CHM13_chrY_T0000304;gene_name=XGY2;ID=exon:CHM13_chrY_T0000304:1;Name=XGY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2429297	2451582	.	+	.	source_gene_common_name=ENSG00000288686;source_gene=ENSG00000288686.1;gene_id=CHM13_chrY_G0000053;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000288686;gene_sources=liftoff;ID=CHM13_chrY_G0000053;Name=ENSG00000288686
CHM13_chrY	CAT	transcript	2429297	2451582	1000	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=CHM13_chrY_T0000301;gene_id=CHM13_chrY_G0000053;Parent=CHM13_chrY_G0000053;transcript_name=CHM13_chrY_T0000301;gene_name=ENSG00000288686;ID=CHM13_chrY_T0000301;Name=ENSG00000288686
CHM13_chrY	CAT	exon	2429297	2429336	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=CHM13_chrY_T0000301;gene_id=CHM13_chrY_G0000053;Parent=CHM13_chrY_T0000301;transcript_name=CHM13_chrY_T0000301;gene_name=ENSG00000288686;ID=exon:CHM13_chrY_T0000301:0;Name=ENSG00000288686;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2429337	2447536	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=CHM13_chrY_T0000301;gene_id=CHM13_chrY_G0000053;Parent=CHM13_chrY_T0000301;transcript_name=CHM13_chrY_T0000301;gene_name=ENSG00000288686;ID=intron:CHM13_chrY_T0000301:0;Name=ENSG00000288686;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2447537	2447578	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=CHM13_chrY_T0000301;gene_id=CHM13_chrY_G0000053;Parent=CHM13_chrY_T0000301;transcript_name=CHM13_chrY_T0000301;gene_name=ENSG00000288686;ID=exon:CHM13_chrY_T0000301:1;Name=ENSG00000288686;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2447579	2451558	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=CHM13_chrY_T0000301;gene_id=CHM13_chrY_G0000053;Parent=CHM13_chrY_T0000301;transcript_name=CHM13_chrY_T0000301;gene_name=ENSG00000288686;ID=intron:CHM13_chrY_T0000301:1;Name=ENSG00000288686;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2451559	2451582	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=CHM13_chrY_T0000301;gene_id=CHM13_chrY_G0000053;Parent=CHM13_chrY_T0000301;transcript_name=CHM13_chrY_T0000301;gene_name=ENSG00000288686;ID=exon:CHM13_chrY_T0000301:2;Name=ENSG00000288686;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2461589	2461693	.	+	.	source_gene_common_name=RNU6-1334P;source_gene=ENSG00000251841.1;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;gene_id=CHM13_chrY_G0000054;gene_biotype=snRNA;gene_name=RNU6-1334P;gene_sources=liftoff;ID=CHM13_chrY_G0000054;Name=RNU6-1334P
CHM13_chrY	CAT	transcript	2461589	2461693	1000	+	.	source_transcript=ENST00000516032.1;source_transcript_name=RNU6-1334P-201;source_gene=ENSG00000251841.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251841.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516032.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1334P;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;transcript_id=CHM13_chrY_T0000302;gene_id=CHM13_chrY_G0000054;Parent=CHM13_chrY_G0000054;transcript_name=CHM13_chrY_T0000302;gene_name=RNU6-1334P;ID=CHM13_chrY_T0000302;Name=RNU6-1334P
CHM13_chrY	CAT	exon	2461589	2461693	.	+	.	source_transcript=ENST00000516032.1;source_transcript_name=RNU6-1334P-201;source_gene=ENSG00000251841.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251841.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516032.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1334P;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;transcript_id=CHM13_chrY_T0000302;gene_id=CHM13_chrY_G0000054;Parent=CHM13_chrY_T0000302;transcript_name=CHM13_chrY_T0000302;gene_name=RNU6-1334P;ID=exon:CHM13_chrY_T0000302:0;Name=RNU6-1334P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2463695	2464522	.	-	.	source_gene_common_name=SRY;source_gene=ENSG00000184895.8;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;gene_id=CHM13_chrY_G0000055;gene_biotype=protein_coding;gene_name=SRY;gene_sources=liftoff;ID=CHM13_chrY_G0000055;Name=SRY
CHM13_chrY	CAT	transcript	2463695	2464522	100	-	.	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=CHM13_chrY_T0000303;gene_id=CHM13_chrY_G0000055;Parent=CHM13_chrY_G0000055;transcript_name=CHM13_chrY_T0000303;gene_name=SRY;ID=CHM13_chrY_T0000303;Name=SRY
CHM13_chrY	CAT	exon	2463695	2464522	.	-	.	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=CHM13_chrY_T0000303;gene_id=CHM13_chrY_G0000055;Parent=CHM13_chrY_T0000303;transcript_name=CHM13_chrY_T0000303;gene_name=SRY;ID=exon:CHM13_chrY_T0000303:0;Name=SRY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2463829	2464443	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=CHM13_chrY_T0000303;gene_id=CHM13_chrY_G0000055;Parent=CHM13_chrY_T0000303;transcript_name=CHM13_chrY_T0000303;gene_name=SRY;ID=CDS:CHM13_chrY_T0000303:0;Name=SRY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2463829	2463831	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=CHM13_chrY_T0000303;gene_id=CHM13_chrY_G0000055;Parent=CHM13_chrY_T0000303;transcript_name=CHM13_chrY_T0000303;gene_name=SRY;ID=stop_codon:CHM13_chrY_T0000303;Name=SRY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2464441	2464443	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=CHM13_chrY_T0000303;gene_id=CHM13_chrY_G0000055;Parent=CHM13_chrY_T0000303;transcript_name=CHM13_chrY_T0000303;gene_name=SRY;ID=start_codon:CHM13_chrY_T0000303;Name=SRY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2466667	2467168	.	+	.	source_gene_common_name=RNASEH2CP1;source_gene=ENSG00000237659.1;gene_id=CHM13_chrY_G0000056;gene_biotype=transcribed_processed_pseudogene;gene_name=RNASEH2CP1;gene_sources=liftoff;ID=CHM13_chrY_G0000056;Name=RNASEH2CP1
CHM13_chrY	CAT	transcript	2466667	2467168	1000	+	.	source_transcript=ENST00000454281.1;source_transcript_name=RNASEH2CP1-201;source_gene=ENSG00000237659.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000237659.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000454281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454281.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNASEH2CP1;transcript_id=CHM13_chrY_T0000305;gene_id=CHM13_chrY_G0000056;Parent=CHM13_chrY_G0000056;transcript_name=CHM13_chrY_T0000305;gene_name=RNASEH2CP1;ID=CHM13_chrY_T0000305;Name=RNASEH2CP1
CHM13_chrY	CAT	exon	2466667	2467168	.	+	.	source_transcript=ENST00000454281.1;source_transcript_name=RNASEH2CP1-201;source_gene=ENSG00000237659.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000237659.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000454281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454281.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNASEH2CP1;transcript_id=CHM13_chrY_T0000305;gene_id=CHM13_chrY_G0000056;Parent=CHM13_chrY_T0000305;transcript_name=CHM13_chrY_T0000305;gene_name=RNASEH2CP1;ID=exon:CHM13_chrY_T0000305:0;Name=RNASEH2CP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2491171	2502309	.	+	.	source_gene_common_name=ENSG00000300312;source_gene=ENSG00000300312.1;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;gene_id=CHM13_chrY_G0000057;gene_biotype=lncRNA;gene_name=ENSG00000300312;gene_sources=liftoff;ID=CHM13_chrY_G0000057;Name=ENSG00000300312
CHM13_chrY	CAT	transcript	2491171	2502309	1000	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=CHM13_chrY_T0000306;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_G0000057;transcript_name=CHM13_chrY_T0000306;gene_name=ENSG00000300312;ID=CHM13_chrY_T0000306;Name=ENSG00000300312
CHM13_chrY	CAT	exon	2491171	2491206	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=CHM13_chrY_T0000306;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_T0000306;transcript_name=CHM13_chrY_T0000306;gene_name=ENSG00000300312;ID=exon:CHM13_chrY_T0000306:0;Name=ENSG00000300312;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2491207	2501313	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=CHM13_chrY_T0000306;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_T0000306;transcript_name=CHM13_chrY_T0000306;gene_name=ENSG00000300312;ID=intron:CHM13_chrY_T0000306:0;Name=ENSG00000300312;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2501314	2501536	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=CHM13_chrY_T0000306;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_T0000306;transcript_name=CHM13_chrY_T0000306;gene_name=ENSG00000300312;ID=exon:CHM13_chrY_T0000306:1;Name=ENSG00000300312;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2501537	2502016	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=CHM13_chrY_T0000306;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_T0000306;transcript_name=CHM13_chrY_T0000306;gene_name=ENSG00000300312;ID=intron:CHM13_chrY_T0000306:1;Name=ENSG00000300312;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2502017	2502309	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=CHM13_chrY_T0000306;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_T0000306;transcript_name=CHM13_chrY_T0000306;gene_name=ENSG00000300312;ID=exon:CHM13_chrY_T0000306:2;Name=ENSG00000300312;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2491171	2500979	1000	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=CHM13_chrY_T0000307;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_G0000057;transcript_name=CHM13_chrY_T0000307;gene_name=ENSG00000300312;ID=CHM13_chrY_T0000307;Name=ENSG00000300312
CHM13_chrY	CAT	exon	2491171	2491206	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=CHM13_chrY_T0000307;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_T0000307;transcript_name=CHM13_chrY_T0000307;gene_name=ENSG00000300312;ID=exon:CHM13_chrY_T0000307:0;Name=ENSG00000300312;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2491207	2500273	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=CHM13_chrY_T0000307;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_T0000307;transcript_name=CHM13_chrY_T0000307;gene_name=ENSG00000300312;ID=intron:CHM13_chrY_T0000307:0;Name=ENSG00000300312;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2500274	2500979	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=CHM13_chrY_T0000307;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_T0000307;transcript_name=CHM13_chrY_T0000307;gene_name=ENSG00000300312;ID=exon:CHM13_chrY_T0000307:1;Name=ENSG00000300312;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2501409	2502297	1000	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=CHM13_chrY_T0000308;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_G0000057;transcript_name=CHM13_chrY_T0000308;gene_name=ENSG00000300312;ID=CHM13_chrY_T0000308;Name=ENSG00000300312
CHM13_chrY	CAT	exon	2501409	2501536	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=CHM13_chrY_T0000308;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_T0000308;transcript_name=CHM13_chrY_T0000308;gene_name=ENSG00000300312;ID=exon:CHM13_chrY_T0000308:0;Name=ENSG00000300312;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2501537	2502016	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=CHM13_chrY_T0000308;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_T0000308;transcript_name=CHM13_chrY_T0000308;gene_name=ENSG00000300312;ID=intron:CHM13_chrY_T0000308:0;Name=ENSG00000300312;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2502017	2502297	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=CHM13_chrY_T0000308;gene_id=CHM13_chrY_G0000057;Parent=CHM13_chrY_T0000308;transcript_name=CHM13_chrY_T0000308;gene_name=ENSG00000300312;ID=exon:CHM13_chrY_T0000308:1;Name=ENSG00000300312;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2504813	2505049	.	+	.	source_gene_common_name=TOMM22P2;source_gene=ENSG00000232195.1;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;gene_id=CHM13_chrY_G0000058;gene_biotype=processed_pseudogene;gene_name=TOMM22P2;gene_sources=liftoff;ID=CHM13_chrY_G0000058;Name=TOMM22P2
CHM13_chrY	CAT	transcript	2504813	2505049	1000	+	.	source_transcript=ENST00000430735.1;source_transcript_name=TOMM22P2-201;source_gene=ENSG00000232195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430735.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P2;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;transcript_id=CHM13_chrY_T0000309;gene_id=CHM13_chrY_G0000058;Parent=CHM13_chrY_G0000058;transcript_name=CHM13_chrY_T0000309;gene_name=TOMM22P2;ID=CHM13_chrY_T0000309;Name=TOMM22P2
CHM13_chrY	CAT	exon	2504813	2505049	.	+	.	source_transcript=ENST00000430735.1;source_transcript_name=TOMM22P2-201;source_gene=ENSG00000232195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430735.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P2;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;transcript_id=CHM13_chrY_T0000309;gene_id=CHM13_chrY_G0000058;Parent=CHM13_chrY_T0000309;transcript_name=CHM13_chrY_T0000309;gene_name=TOMM22P2;ID=exon:CHM13_chrY_T0000309:0;Name=TOMM22P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2505023	2517682	.	-	.	source_gene_common_name=ENSG00000286130;source_gene=ENSG00000286130.1;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;gene_id=CHM13_chrY_G0000059;gene_biotype=lncRNA;gene_name=ENSG00000286130;gene_sources=liftoff;ID=CHM13_chrY_G0000059;Name=ENSG00000286130
CHM13_chrY	CAT	transcript	2505023	2517682	1000	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=CHM13_chrY_T0000310;gene_id=CHM13_chrY_G0000059;Parent=CHM13_chrY_G0000059;transcript_name=CHM13_chrY_T0000310;gene_name=ENSG00000286130;ID=CHM13_chrY_T0000310;Name=ENSG00000286130
CHM13_chrY	CAT	exon	2505023	2505566	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=CHM13_chrY_T0000310;gene_id=CHM13_chrY_G0000059;Parent=CHM13_chrY_T0000310;transcript_name=CHM13_chrY_T0000310;gene_name=ENSG00000286130;ID=exon:CHM13_chrY_T0000310:0;Name=ENSG00000286130;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2505567	2506356	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=CHM13_chrY_T0000310;gene_id=CHM13_chrY_G0000059;Parent=CHM13_chrY_T0000310;transcript_name=CHM13_chrY_T0000310;gene_name=ENSG00000286130;ID=intron:CHM13_chrY_T0000310:0;Name=ENSG00000286130;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2506357	2506582	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=CHM13_chrY_T0000310;gene_id=CHM13_chrY_G0000059;Parent=CHM13_chrY_T0000310;transcript_name=CHM13_chrY_T0000310;gene_name=ENSG00000286130;ID=exon:CHM13_chrY_T0000310:1;Name=ENSG00000286130;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2506583	2517301	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=CHM13_chrY_T0000310;gene_id=CHM13_chrY_G0000059;Parent=CHM13_chrY_T0000310;transcript_name=CHM13_chrY_T0000310;gene_name=ENSG00000286130;ID=intron:CHM13_chrY_T0000310:1;Name=ENSG00000286130;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2517302	2517682	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=CHM13_chrY_T0000310;gene_id=CHM13_chrY_G0000059;Parent=CHM13_chrY_T0000310;transcript_name=CHM13_chrY_T0000310;gene_name=ENSG00000286130;ID=exon:CHM13_chrY_T0000310:2;Name=ENSG00000286130;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2518433	2609182	.	+	.	source_gene_common_name=RPS4Y1;source_gene=ENSG00000129824.16;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;gene_id=CHM13_chrY_G0000060;gene_biotype=protein_coding;gene_name=RPS4Y1;gene_sources=liftoff;ID=CHM13_chrY_G0000060;Name=RPS4Y1
CHM13_chrY	CAT	transcript	2518433	2544100	100	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_G0000060;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=CHM13_chrY_T0000311;Name=RPS4Y1
CHM13_chrY	CAT	exon	2518433	2518458	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000311:0;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2518456	2518458	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000311:0;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2518456	2518458	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=start_codon:CHM13_chrY_T0000311;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2518459	2518995	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000311:0;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2518996	2519073	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000311:1;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2518996	2519073	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000311:1;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2519074	2520907	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000311:1;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2520908	2521088	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000311:2;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2520908	2521088	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000311:2;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2521089	2522476	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000311:2;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2522477	2522574	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000311:3;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2522477	2522574	.	+	2	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000311:3;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2522575	2531431	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000311:3;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2531432	2531603	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000311:4;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2531432	2531603	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000311:4;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2531604	2541919	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000311:4;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2541920	2542077	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000311:5;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2541920	2542077	.	+	2	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000311:5;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2542078	2543624	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000311:5;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2543625	2544100	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000311:6;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2543625	2543726	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000311:6;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2543724	2543726	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=CHM13_chrY_T0000311;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000311;transcript_name=CHM13_chrY_T0000311;gene_name=RPS4Y1;ID=stop_codon:CHM13_chrY_T0000311;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2518751	2543694	100	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_G0000060;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=CHM13_chrY_T0000312;Name=RPS4Y1
CHM13_chrY	CAT	exon	2518751	2518804	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000312:0;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2518775	2518804	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000312:0;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2518775	2518777	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=start_codon:CHM13_chrY_T0000312;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2518805	2518995	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000312:0;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2518996	2519073	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000312:1;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2518996	2519073	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000312:1;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2519074	2520907	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000312:1;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2520908	2521088	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000312:2;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2520908	2521088	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000312:2;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2521089	2522476	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000312:2;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2522477	2522574	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000312:3;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2522477	2522574	.	+	2	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000312:3;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2522575	2531431	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000312:3;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2531432	2531603	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000312:4;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2531432	2531603	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000312:4;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2531604	2541919	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000312:4;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2541920	2542077	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000312:5;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2541920	2542077	.	+	2	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000312:5;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2542078	2543624	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000312:5;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2543625	2543694	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000312:6;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2543625	2543694	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=CHM13_chrY_T0000312;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000312;transcript_name=CHM13_chrY_T0000312;gene_name=RPS4Y1;ID=CDS:CHM13_chrY_T0000312:6;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2530928	2543788	1000	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=CHM13_chrY_T0000313;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_G0000060;transcript_name=CHM13_chrY_T0000313;gene_name=RPS4Y1;ID=CHM13_chrY_T0000313;Name=RPS4Y1
CHM13_chrY	CAT	exon	2530928	2531603	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=CHM13_chrY_T0000313;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000313;transcript_name=CHM13_chrY_T0000313;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000313:0;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2531604	2541919	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=CHM13_chrY_T0000313;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000313;transcript_name=CHM13_chrY_T0000313;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000313:0;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2541920	2542077	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=CHM13_chrY_T0000313;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000313;transcript_name=CHM13_chrY_T0000313;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000313:1;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2542078	2543624	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=CHM13_chrY_T0000313;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000313;transcript_name=CHM13_chrY_T0000313;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000313:1;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2543625	2543788	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=CHM13_chrY_T0000313;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000313;transcript_name=CHM13_chrY_T0000313;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000313:2;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2531562	2609182	1000	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=CHM13_chrY_T0000314;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_G0000060;transcript_name=CHM13_chrY_T0000314;gene_name=RPS4Y1;ID=CHM13_chrY_T0000314;Name=RPS4Y1
CHM13_chrY	CAT	exon	2531562	2531603	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=CHM13_chrY_T0000314;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000314;transcript_name=CHM13_chrY_T0000314;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000314:0;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2531604	2606046	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=CHM13_chrY_T0000314;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000314;transcript_name=CHM13_chrY_T0000314;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000314:0;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2606047	2606168	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=CHM13_chrY_T0000314;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000314;transcript_name=CHM13_chrY_T0000314;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000314:1;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2606169	2608892	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=CHM13_chrY_T0000314;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000314;transcript_name=CHM13_chrY_T0000314;gene_name=RPS4Y1;ID=intron:CHM13_chrY_T0000314:1;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2608893	2609182	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=CHM13_chrY_T0000314;gene_id=CHM13_chrY_G0000060;Parent=CHM13_chrY_T0000314;transcript_name=CHM13_chrY_T0000314;gene_name=RPS4Y1;ID=exon:CHM13_chrY_T0000314:2;Name=RPS4Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2558516	2560485	.	-	.	source_gene_common_name=HSFY3P;source_gene=ENSG00000227289.3;gene_id=CHM13_chrY_G0000061;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY3P;gene_sources=liftoff;ID=CHM13_chrY_G0000061;Name=HSFY3P
CHM13_chrY	CAT	transcript	2558516	2560485	1000	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=CHM13_chrY_T0000315;gene_id=CHM13_chrY_G0000061;Parent=CHM13_chrY_G0000061;transcript_name=CHM13_chrY_T0000315;gene_name=HSFY3P;ID=CHM13_chrY_T0000315;Name=HSFY3P
CHM13_chrY	CAT	exon	2558516	2559194	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=CHM13_chrY_T0000315;gene_id=CHM13_chrY_G0000061;Parent=CHM13_chrY_T0000315;transcript_name=CHM13_chrY_T0000315;gene_name=HSFY3P;ID=exon:CHM13_chrY_T0000315:0;Name=HSFY3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2559195	2559973	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=CHM13_chrY_T0000315;gene_id=CHM13_chrY_G0000061;Parent=CHM13_chrY_T0000315;transcript_name=CHM13_chrY_T0000315;gene_name=HSFY3P;ID=intron:CHM13_chrY_T0000315:0;Name=HSFY3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2559974	2560485	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=CHM13_chrY_T0000315;gene_id=CHM13_chrY_G0000061;Parent=CHM13_chrY_T0000315;transcript_name=CHM13_chrY_T0000315;gene_name=HSFY3P;ID=exon:CHM13_chrY_T0000315:1;Name=HSFY3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2559943	2567384	.	-	.	source_gene_common_name=ENSG00000290841;source_gene=ENSG00000290841.1;gene_id=CHM13_chrY_G0000062;gene_biotype=lncRNA;gene_name=ENSG00000290841;gene_sources=liftoff;ID=CHM13_chrY_G0000062;Name=ENSG00000290841
CHM13_chrY	CAT	transcript	2559943	2567384	1000	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=CHM13_chrY_T0000316;gene_id=CHM13_chrY_G0000062;Parent=CHM13_chrY_G0000062;transcript_name=CHM13_chrY_T0000316;gene_name=ENSG00000290841;ID=CHM13_chrY_T0000316;Name=ENSG00000290841
CHM13_chrY	CAT	exon	2559943	2560240	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=CHM13_chrY_T0000316;gene_id=CHM13_chrY_G0000062;Parent=CHM13_chrY_T0000316;transcript_name=CHM13_chrY_T0000316;gene_name=ENSG00000290841;ID=exon:CHM13_chrY_T0000316:0;Name=ENSG00000290841;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2560241	2563975	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=CHM13_chrY_T0000316;gene_id=CHM13_chrY_G0000062;Parent=CHM13_chrY_T0000316;transcript_name=CHM13_chrY_T0000316;gene_name=ENSG00000290841;ID=intron:CHM13_chrY_T0000316:0;Name=ENSG00000290841;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2563976	2564076	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=CHM13_chrY_T0000316;gene_id=CHM13_chrY_G0000062;Parent=CHM13_chrY_T0000316;transcript_name=CHM13_chrY_T0000316;gene_name=ENSG00000290841;ID=exon:CHM13_chrY_T0000316:1;Name=ENSG00000290841;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2564077	2565277	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=CHM13_chrY_T0000316;gene_id=CHM13_chrY_G0000062;Parent=CHM13_chrY_T0000316;transcript_name=CHM13_chrY_T0000316;gene_name=ENSG00000290841;ID=intron:CHM13_chrY_T0000316:1;Name=ENSG00000290841;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2565278	2565395	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=CHM13_chrY_T0000316;gene_id=CHM13_chrY_G0000062;Parent=CHM13_chrY_T0000316;transcript_name=CHM13_chrY_T0000316;gene_name=ENSG00000290841;ID=exon:CHM13_chrY_T0000316:2;Name=ENSG00000290841;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2565396	2567254	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=CHM13_chrY_T0000316;gene_id=CHM13_chrY_G0000062;Parent=CHM13_chrY_T0000316;transcript_name=CHM13_chrY_T0000316;gene_name=ENSG00000290841;ID=intron:CHM13_chrY_T0000316:2;Name=ENSG00000290841;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2567255	2567384	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=CHM13_chrY_T0000316;gene_id=CHM13_chrY_G0000062;Parent=CHM13_chrY_T0000316;transcript_name=CHM13_chrY_T0000316;gene_name=ENSG00000290841;ID=exon:CHM13_chrY_T0000316:3;Name=ENSG00000290841;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2606184	2608302	.	-	.	source_gene_common_name=NAP1L1P2;source_gene=ENSG00000229163.2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;gene_id=CHM13_chrY_G0000063;gene_biotype=processed_pseudogene;gene_name=NAP1L1P2;gene_sources=liftoff;ID=CHM13_chrY_G0000063;Name=NAP1L1P2
CHM13_chrY	CAT	transcript	2606184	2608302	1000	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=CHM13_chrY_T0000317;gene_id=CHM13_chrY_G0000063;Parent=CHM13_chrY_G0000063;transcript_name=CHM13_chrY_T0000317;gene_name=NAP1L1P2;ID=CHM13_chrY_T0000317;Name=NAP1L1P2
CHM13_chrY	CAT	exon	2606184	2606225	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=CHM13_chrY_T0000317;gene_id=CHM13_chrY_G0000063;Parent=CHM13_chrY_T0000317;transcript_name=CHM13_chrY_T0000317;gene_name=NAP1L1P2;ID=exon:CHM13_chrY_T0000317:0;Name=NAP1L1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2606226	2606552	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=CHM13_chrY_T0000317;gene_id=CHM13_chrY_G0000063;Parent=CHM13_chrY_T0000317;transcript_name=CHM13_chrY_T0000317;gene_name=NAP1L1P2;ID=intron:CHM13_chrY_T0000317:0;Name=NAP1L1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2606553	2607549	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=CHM13_chrY_T0000317;gene_id=CHM13_chrY_G0000063;Parent=CHM13_chrY_T0000317;transcript_name=CHM13_chrY_T0000317;gene_name=NAP1L1P2;ID=exon:CHM13_chrY_T0000317:1;Name=NAP1L1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2607550	2608252	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=CHM13_chrY_T0000317;gene_id=CHM13_chrY_G0000063;Parent=CHM13_chrY_T0000317;transcript_name=CHM13_chrY_T0000317;gene_name=NAP1L1P2;ID=intron:CHM13_chrY_T0000317:1;Name=NAP1L1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2608253	2608302	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=CHM13_chrY_T0000317;gene_id=CHM13_chrY_G0000063;Parent=CHM13_chrY_T0000317;transcript_name=CHM13_chrY_T0000317;gene_name=NAP1L1P2;ID=exon:CHM13_chrY_T0000317:2;Name=NAP1L1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2611588	2611953	.	-	.	source_gene_common_name=ENSG00000278847;source_gene=ENSG00000278847.1;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;gene_id=CHM13_chrY_G0000064;gene_biotype=lncRNA;gene_name=ENSG00000278847;gene_sources=liftoff;ID=CHM13_chrY_G0000064;Name=ENSG00000278847
CHM13_chrY	CAT	transcript	2611588	2611953	1000	-	.	source_transcript=ENST00000611750.1;source_transcript_name=ENST00000611750;source_gene=ENSG00000278847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000278847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000611750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000611750.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278847;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;transcript_id=CHM13_chrY_T0000318;gene_id=CHM13_chrY_G0000064;Parent=CHM13_chrY_G0000064;transcript_name=CHM13_chrY_T0000318;gene_name=ENSG00000278847;ID=CHM13_chrY_T0000318;Name=ENSG00000278847
CHM13_chrY	CAT	exon	2611588	2611953	.	-	.	source_transcript=ENST00000611750.1;source_transcript_name=ENST00000611750;source_gene=ENSG00000278847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000278847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000611750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000611750.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278847;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;transcript_id=CHM13_chrY_T0000318;gene_id=CHM13_chrY_G0000064;Parent=CHM13_chrY_T0000318;transcript_name=CHM13_chrY_T0000318;gene_name=ENSG00000278847;ID=exon:CHM13_chrY_T0000318:0;Name=ENSG00000278847;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2612463	2659668	.	+	.	source_gene_common_name=ZFY;source_gene=ENSG00000067646.12;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;gene_id=CHM13_chrY_G0000065;gene_biotype=protein_coding;gene_name=ZFY;gene_sources=liftoff;ID=CHM13_chrY_G0000065;Name=ZFY
CHM13_chrY	CAT	transcript	2612463	2659668	100	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_G0000065;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=CHM13_chrY_T0000319;Name=ZFY
CHM13_chrY	CAT	exon	2612463	2612628	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=exon:CHM13_chrY_T0000319:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2612629	2631071	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=intron:CHM13_chrY_T0000319:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2631072	2631160	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=exon:CHM13_chrY_T0000319:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2631100	2631160	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000319:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2631100	2631102	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=start_codon:CHM13_chrY_T0000319;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2631161	2638235	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=intron:CHM13_chrY_T0000319:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2638236	2638808	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=exon:CHM13_chrY_T0000319:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2638236	2638808	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000319:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2638809	2652256	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=intron:CHM13_chrY_T0000319:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2652257	2652406	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=exon:CHM13_chrY_T0000319:3;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2652257	2652406	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000319:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2652407	2652672	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=intron:CHM13_chrY_T0000319:3;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2652673	2652816	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=exon:CHM13_chrY_T0000319:4;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2652673	2652816	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000319:3;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2652817	2653831	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=intron:CHM13_chrY_T0000319:4;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2653832	2653984	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=exon:CHM13_chrY_T0000319:5;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2653832	2653984	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000319:4;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2653985	2655101	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=intron:CHM13_chrY_T0000319:5;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2655102	2655242	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=exon:CHM13_chrY_T0000319:6;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2655102	2655242	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000319:5;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2655243	2655971	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=intron:CHM13_chrY_T0000319:6;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2655972	2659668	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=exon:CHM13_chrY_T0000319:7;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2655972	2657155	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000319:6;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2657153	2657155	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=CHM13_chrY_T0000319;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000319;transcript_name=CHM13_chrY_T0000319;gene_name=ZFY;ID=stop_codon:CHM13_chrY_T0000319;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2612563	2659668	100	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_G0000065;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=CHM13_chrY_T0000320;Name=ZFY
CHM13_chrY	CAT	exon	2612563	2612951	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=exon:CHM13_chrY_T0000320:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2612952	2631071	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=intron:CHM13_chrY_T0000320:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2631072	2631160	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=exon:CHM13_chrY_T0000320:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2631100	2631160	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000320:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2631100	2631102	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=start_codon:CHM13_chrY_T0000320;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2631161	2638235	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=intron:CHM13_chrY_T0000320:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2638236	2638808	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=exon:CHM13_chrY_T0000320:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2638236	2638808	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000320:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2638809	2652256	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=intron:CHM13_chrY_T0000320:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2652257	2652406	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=exon:CHM13_chrY_T0000320:3;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2652257	2652406	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000320:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2652407	2652672	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=intron:CHM13_chrY_T0000320:3;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2652673	2652816	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=exon:CHM13_chrY_T0000320:4;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2652673	2652816	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000320:3;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2652817	2653831	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=intron:CHM13_chrY_T0000320:4;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2653832	2653984	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=exon:CHM13_chrY_T0000320:5;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2653832	2653984	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000320:4;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2653985	2655101	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=intron:CHM13_chrY_T0000320:5;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2655102	2655242	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=exon:CHM13_chrY_T0000320:6;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2655102	2655242	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000320:5;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2655243	2655971	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=intron:CHM13_chrY_T0000320:6;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2655972	2659668	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=exon:CHM13_chrY_T0000320:7;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2655972	2657155	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000320:6;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2657153	2657155	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=CHM13_chrY_T0000320;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000320;transcript_name=CHM13_chrY_T0000320;gene_name=ZFY;ID=stop_codon:CHM13_chrY_T0000320;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2612571	2657509	100	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_G0000065;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=CHM13_chrY_T0000321;Name=ZFY
CHM13_chrY	CAT	exon	2612571	2612628	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=exon:CHM13_chrY_T0000321:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2612629	2631071	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=intron:CHM13_chrY_T0000321:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2631072	2631160	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=exon:CHM13_chrY_T0000321:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2631100	2631160	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000321:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2631100	2631102	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=start_codon:CHM13_chrY_T0000321;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2631161	2652256	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=intron:CHM13_chrY_T0000321:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2652257	2652406	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=exon:CHM13_chrY_T0000321:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2652257	2652406	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000321:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2652407	2652672	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=intron:CHM13_chrY_T0000321:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2652673	2652816	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=exon:CHM13_chrY_T0000321:3;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2652673	2652816	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000321:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2652817	2653831	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=intron:CHM13_chrY_T0000321:3;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2653832	2653984	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=exon:CHM13_chrY_T0000321:4;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2653832	2653984	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000321:3;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2653985	2655101	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=intron:CHM13_chrY_T0000321:4;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2655102	2655242	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=exon:CHM13_chrY_T0000321:5;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2655102	2655242	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000321:4;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2655243	2655971	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=intron:CHM13_chrY_T0000321:5;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2655972	2657509	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=exon:CHM13_chrY_T0000321:6;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2655972	2657155	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000321:5;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2657153	2657155	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=CHM13_chrY_T0000321;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000321;transcript_name=CHM13_chrY_T0000321;gene_name=ZFY;ID=stop_codon:CHM13_chrY_T0000321;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2612682	2655215	1000	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=CHM13_chrY_T0000322;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_G0000065;transcript_name=CHM13_chrY_T0000322;gene_name=ZFY;ID=CHM13_chrY_T0000322;Name=ZFY
CHM13_chrY	CAT	exon	2612682	2612951	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=CHM13_chrY_T0000322;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000322;transcript_name=CHM13_chrY_T0000322;gene_name=ZFY;ID=exon:CHM13_chrY_T0000322:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2612952	2652256	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=CHM13_chrY_T0000322;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000322;transcript_name=CHM13_chrY_T0000322;gene_name=ZFY;ID=intron:CHM13_chrY_T0000322:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2652257	2652406	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=CHM13_chrY_T0000322;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000322;transcript_name=CHM13_chrY_T0000322;gene_name=ZFY;ID=exon:CHM13_chrY_T0000322:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2652407	2652672	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=CHM13_chrY_T0000322;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000322;transcript_name=CHM13_chrY_T0000322;gene_name=ZFY;ID=intron:CHM13_chrY_T0000322:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2652673	2652816	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=CHM13_chrY_T0000322;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000322;transcript_name=CHM13_chrY_T0000322;gene_name=ZFY;ID=exon:CHM13_chrY_T0000322:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2652817	2655101	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=CHM13_chrY_T0000322;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000322;transcript_name=CHM13_chrY_T0000322;gene_name=ZFY;ID=intron:CHM13_chrY_T0000322:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2655102	2655215	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=CHM13_chrY_T0000322;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000322;transcript_name=CHM13_chrY_T0000322;gene_name=ZFY;ID=exon:CHM13_chrY_T0000322:3;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2612687	2638448	100	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=CHM13_chrY_T0000323;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_G0000065;transcript_name=CHM13_chrY_T0000323;gene_name=ZFY;ID=CHM13_chrY_T0000323;Name=ZFY
CHM13_chrY	CAT	exon	2612687	2612951	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=CHM13_chrY_T0000323;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000323;transcript_name=CHM13_chrY_T0000323;gene_name=ZFY;ID=exon:CHM13_chrY_T0000323:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2612952	2631071	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=CHM13_chrY_T0000323;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000323;transcript_name=CHM13_chrY_T0000323;gene_name=ZFY;ID=intron:CHM13_chrY_T0000323:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2631072	2631160	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=CHM13_chrY_T0000323;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000323;transcript_name=CHM13_chrY_T0000323;gene_name=ZFY;ID=exon:CHM13_chrY_T0000323:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2631100	2631160	.	+	0	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=CHM13_chrY_T0000323;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000323;transcript_name=CHM13_chrY_T0000323;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000323:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2631100	2631102	.	+	0	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=CHM13_chrY_T0000323;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000323;transcript_name=CHM13_chrY_T0000323;gene_name=ZFY;ID=start_codon:CHM13_chrY_T0000323;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2631161	2638235	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=CHM13_chrY_T0000323;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000323;transcript_name=CHM13_chrY_T0000323;gene_name=ZFY;ID=intron:CHM13_chrY_T0000323:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2638236	2638448	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=CHM13_chrY_T0000323;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000323;transcript_name=CHM13_chrY_T0000323;gene_name=ZFY;ID=exon:CHM13_chrY_T0000323:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2638236	2638448	.	+	2	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=CHM13_chrY_T0000323;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000323;transcript_name=CHM13_chrY_T0000323;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000323:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2612833	2658308	100	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_G0000065;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=CHM13_chrY_T0000324;Name=ZFY
CHM13_chrY	CAT	exon	2612833	2612951	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=exon:CHM13_chrY_T0000324:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2612952	2638235	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=intron:CHM13_chrY_T0000324:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2638236	2638808	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=exon:CHM13_chrY_T0000324:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2638253	2638808	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000324:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	2638253	2638255	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=start_codon:CHM13_chrY_T0000324;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2638809	2652256	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=intron:CHM13_chrY_T0000324:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2652257	2652406	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=exon:CHM13_chrY_T0000324:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2652257	2652406	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000324:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2652407	2652672	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=intron:CHM13_chrY_T0000324:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2652673	2652816	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=exon:CHM13_chrY_T0000324:3;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2652673	2652816	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000324:2;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2652817	2655101	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=intron:CHM13_chrY_T0000324:3;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2655102	2655242	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=exon:CHM13_chrY_T0000324:4;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2655102	2655242	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000324:3;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2655243	2655971	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=intron:CHM13_chrY_T0000324:4;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2655972	2658308	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=exon:CHM13_chrY_T0000324:5;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	2655972	2657155	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=CDS:CHM13_chrY_T0000324:4;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	2657153	2657155	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=CHM13_chrY_T0000324;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000324;transcript_name=CHM13_chrY_T0000324;gene_name=ZFY;ID=stop_codon:CHM13_chrY_T0000324;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2654981	2656512	1000	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=CHM13_chrY_T0000326;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_G0000065;transcript_name=CHM13_chrY_T0000326;gene_name=ZFY;ID=CHM13_chrY_T0000326;Name=ZFY
CHM13_chrY	CAT	exon	2654981	2655242	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=CHM13_chrY_T0000326;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000326;transcript_name=CHM13_chrY_T0000326;gene_name=ZFY;ID=exon:CHM13_chrY_T0000326:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2655243	2655971	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=CHM13_chrY_T0000326;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000326;transcript_name=CHM13_chrY_T0000326;gene_name=ZFY;ID=intron:CHM13_chrY_T0000326:0;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2655972	2656512	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=CHM13_chrY_T0000326;gene_id=CHM13_chrY_G0000065;Parent=CHM13_chrY_T0000326;transcript_name=CHM13_chrY_T0000326;gene_name=ZFY;ID=exon:CHM13_chrY_T0000326:1;Name=ZFY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2643991	2679733	.	-	.	source_gene_common_name=ZFY-AS1;source_gene=ENSG00000233070.2;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;gene_id=CHM13_chrY_G0000066;gene_biotype=lncRNA;gene_name=ZFY-AS1;gene_sources=liftoff;ID=CHM13_chrY_G0000066;Name=ZFY-AS1
CHM13_chrY	CAT	transcript	2643991	2679980	1000	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=CHM13_chrY_T0000325;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_G0000066;transcript_name=CHM13_chrY_T0000325;gene_name=ZFY-AS1;ID=CHM13_chrY_T0000325;Name=ZFY-AS1
CHM13_chrY	CAT	exon	2643991	2644101	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=CHM13_chrY_T0000325;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_T0000325;transcript_name=CHM13_chrY_T0000325;gene_name=ZFY-AS1;ID=exon:CHM13_chrY_T0000325:0;Name=ZFY-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2644102	2658999	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=CHM13_chrY_T0000325;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_T0000325;transcript_name=CHM13_chrY_T0000325;gene_name=ZFY-AS1;ID=intron:CHM13_chrY_T0000325:0;Name=ZFY-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2659000	2659089	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=CHM13_chrY_T0000325;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_T0000325;transcript_name=CHM13_chrY_T0000325;gene_name=ZFY-AS1;ID=exon:CHM13_chrY_T0000325:1;Name=ZFY-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2659090	2679474	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=CHM13_chrY_T0000325;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_T0000325;transcript_name=CHM13_chrY_T0000325;gene_name=ZFY-AS1;ID=intron:CHM13_chrY_T0000325:1;Name=ZFY-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2679475	2679980	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=CHM13_chrY_T0000325;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_T0000325;transcript_name=CHM13_chrY_T0000325;gene_name=ZFY-AS1;ID=exon:CHM13_chrY_T0000325:2;Name=ZFY-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2678788	2679963	1000	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=CHM13_chrY_T0000328;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_G0000066;transcript_name=CHM13_chrY_T0000328;gene_name=ZFY-AS1;ID=CHM13_chrY_T0000328;Name=ZFY-AS1
CHM13_chrY	CAT	exon	2678788	2679085	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=CHM13_chrY_T0000328;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_T0000328;transcript_name=CHM13_chrY_T0000328;gene_name=ZFY-AS1;ID=exon:CHM13_chrY_T0000328:0;Name=ZFY-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2679086	2679474	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=CHM13_chrY_T0000328;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_T0000328;transcript_name=CHM13_chrY_T0000328;gene_name=ZFY-AS1;ID=intron:CHM13_chrY_T0000328:0;Name=ZFY-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2679475	2679963	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=CHM13_chrY_T0000328;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_T0000328;transcript_name=CHM13_chrY_T0000328;gene_name=ZFY-AS1;ID=exon:CHM13_chrY_T0000328:1;Name=ZFY-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2678790	2679733	1000	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=CHM13_chrY_T0000329;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_G0000066;transcript_name=CHM13_chrY_T0000329;gene_name=ZFY-AS1;ID=CHM13_chrY_T0000329;Name=ZFY-AS1
CHM13_chrY	CAT	exon	2678790	2679085	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=CHM13_chrY_T0000329;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_T0000329;transcript_name=CHM13_chrY_T0000329;gene_name=ZFY-AS1;ID=exon:CHM13_chrY_T0000329:0;Name=ZFY-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2679086	2679474	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=CHM13_chrY_T0000329;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_T0000329;transcript_name=CHM13_chrY_T0000329;gene_name=ZFY-AS1;ID=intron:CHM13_chrY_T0000329:0;Name=ZFY-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2679475	2679563	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=CHM13_chrY_T0000329;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_T0000329;transcript_name=CHM13_chrY_T0000329;gene_name=ZFY-AS1;ID=exon:CHM13_chrY_T0000329:1;Name=ZFY-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2679564	2679699	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=CHM13_chrY_T0000329;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_T0000329;transcript_name=CHM13_chrY_T0000329;gene_name=ZFY-AS1;ID=intron:CHM13_chrY_T0000329:1;Name=ZFY-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2679700	2679733	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=CHM13_chrY_T0000329;gene_id=CHM13_chrY_G0000066;Parent=CHM13_chrY_T0000329;transcript_name=CHM13_chrY_T0000329;gene_name=ZFY-AS1;ID=exon:CHM13_chrY_T0000329:2;Name=ZFY-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2672229	2672435	.	-	.	source_gene_common_name=EEF1A1P41;source_gene=ENSG00000223600.1;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;gene_id=CHM13_chrY_G0000067;gene_biotype=processed_pseudogene;gene_name=EEF1A1P41;gene_sources=liftoff;ID=CHM13_chrY_G0000067;Name=EEF1A1P41
CHM13_chrY	CAT	transcript	2672229	2672435	1000	-	.	source_transcript=ENST00000414667.1;source_transcript_name=EEF1A1P41-201;source_gene=ENSG00000223600.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223600.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414667.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EEF1A1P41;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;transcript_id=CHM13_chrY_T0000327;gene_id=CHM13_chrY_G0000067;Parent=CHM13_chrY_G0000067;transcript_name=CHM13_chrY_T0000327;gene_name=EEF1A1P41;ID=CHM13_chrY_T0000327;Name=EEF1A1P41
CHM13_chrY	CAT	exon	2672229	2672435	.	-	.	source_transcript=ENST00000414667.1;source_transcript_name=EEF1A1P41-201;source_gene=ENSG00000223600.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223600.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414667.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EEF1A1P41;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;transcript_id=CHM13_chrY_T0000327;gene_id=CHM13_chrY_G0000067;Parent=CHM13_chrY_T0000327;transcript_name=CHM13_chrY_T0000327;gene_name=EEF1A1P41;ID=exon:CHM13_chrY_T0000327:0;Name=EEF1A1P41;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2680049	2877654	.	+	.	source_gene_common_name=LINC00278;source_gene=ENSG00000231535.9;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;gene_id=CHM13_chrY_G0000068;gene_biotype=lncRNA;gene_name=LINC00278;gene_sources=liftoff;ID=CHM13_chrY_G0000068;Name=LINC00278
CHM13_chrY	CAT	transcript	2680049	2681188	1000	+	.	source_transcript=ENST00000654222.1;source_transcript_name=LINC00278-206;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654222.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;transcript_id=CHM13_chrY_T0000330;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000330;gene_name=LINC00278;ID=CHM13_chrY_T0000330;Name=LINC00278
CHM13_chrY	CAT	exon	2680049	2681188	.	+	.	source_transcript=ENST00000654222.1;source_transcript_name=LINC00278-206;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;transcript_id=CHM13_chrY_T0000330;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000330;transcript_name=CHM13_chrY_T0000330;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000330:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680049	2797764	1000	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=CHM13_chrY_T0000331;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000331;gene_name=LINC00278;ID=CHM13_chrY_T0000331;Name=LINC00278
CHM13_chrY	CAT	exon	2680049	2680379	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=CHM13_chrY_T0000331;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000331;transcript_name=CHM13_chrY_T0000331;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000331:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2735811	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=CHM13_chrY_T0000331;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000331;transcript_name=CHM13_chrY_T0000331;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000331:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2735812	2735939	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=CHM13_chrY_T0000331;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000331;transcript_name=CHM13_chrY_T0000331;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000331:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2735940	2756432	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=CHM13_chrY_T0000331;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000331;transcript_name=CHM13_chrY_T0000331;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000331:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2756433	2756490	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=CHM13_chrY_T0000331;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000331;transcript_name=CHM13_chrY_T0000331;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000331:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2756491	2774148	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=CHM13_chrY_T0000331;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000331;transcript_name=CHM13_chrY_T0000331;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000331:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774149	2774207	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=CHM13_chrY_T0000331;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000331;transcript_name=CHM13_chrY_T0000331;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000331:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2774208	2788433	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=CHM13_chrY_T0000331;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000331;transcript_name=CHM13_chrY_T0000331;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000331:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2788434	2788499	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=CHM13_chrY_T0000331;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000331;transcript_name=CHM13_chrY_T0000331;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000331:4;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2788500	2797580	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=CHM13_chrY_T0000331;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000331;transcript_name=CHM13_chrY_T0000331;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000331:4;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2797581	2797764	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=CHM13_chrY_T0000331;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000331;transcript_name=CHM13_chrY_T0000331;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000331:5;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680049	2877654	1000	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=CHM13_chrY_T0000332;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000332;gene_name=LINC00278;ID=CHM13_chrY_T0000332;Name=LINC00278
CHM13_chrY	CAT	exon	2680049	2680379	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=CHM13_chrY_T0000332;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000332;transcript_name=CHM13_chrY_T0000332;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000332:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2876644	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=CHM13_chrY_T0000332;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000332;transcript_name=CHM13_chrY_T0000332;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000332:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2876645	2877654	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=CHM13_chrY_T0000332;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000332;transcript_name=CHM13_chrY_T0000332;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000332:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680056	2774972	1000	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=CHM13_chrY_T0000333;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000333;gene_name=LINC00278;ID=CHM13_chrY_T0000333;Name=LINC00278
CHM13_chrY	CAT	exon	2680056	2680379	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=CHM13_chrY_T0000333;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000333;transcript_name=CHM13_chrY_T0000333;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000333:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2756432	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=CHM13_chrY_T0000333;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000333;transcript_name=CHM13_chrY_T0000333;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000333:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2756433	2756490	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=CHM13_chrY_T0000333;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000333;transcript_name=CHM13_chrY_T0000333;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000333:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2756491	2774145	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=CHM13_chrY_T0000333;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000333;transcript_name=CHM13_chrY_T0000333;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000333:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774146	2774972	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=CHM13_chrY_T0000333;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000333;transcript_name=CHM13_chrY_T0000333;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000333:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680056	2877654	1000	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=CHM13_chrY_T0000334;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000334;gene_name=LINC00278;ID=CHM13_chrY_T0000334;Name=LINC00278
CHM13_chrY	CAT	exon	2680056	2680379	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=CHM13_chrY_T0000334;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000334;transcript_name=CHM13_chrY_T0000334;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000334:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2735811	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=CHM13_chrY_T0000334;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000334;transcript_name=CHM13_chrY_T0000334;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000334:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2735812	2735939	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=CHM13_chrY_T0000334;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000334;transcript_name=CHM13_chrY_T0000334;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000334:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2735940	2756432	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=CHM13_chrY_T0000334;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000334;transcript_name=CHM13_chrY_T0000334;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000334:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2756433	2756490	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=CHM13_chrY_T0000334;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000334;transcript_name=CHM13_chrY_T0000334;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000334:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2756491	2774145	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=CHM13_chrY_T0000334;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000334;transcript_name=CHM13_chrY_T0000334;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000334:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774146	2774207	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=CHM13_chrY_T0000334;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000334;transcript_name=CHM13_chrY_T0000334;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000334:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2774208	2876644	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=CHM13_chrY_T0000334;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000334;transcript_name=CHM13_chrY_T0000334;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000334:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2876645	2877654	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=CHM13_chrY_T0000334;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000334;transcript_name=CHM13_chrY_T0000334;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000334:4;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680056	2797850	1000	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=CHM13_chrY_T0000335;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000335;gene_name=LINC00278;ID=CHM13_chrY_T0000335;Name=LINC00278
CHM13_chrY	CAT	exon	2680056	2680379	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=CHM13_chrY_T0000335;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000335;transcript_name=CHM13_chrY_T0000335;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000335:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2756432	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=CHM13_chrY_T0000335;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000335;transcript_name=CHM13_chrY_T0000335;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000335:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2756433	2756490	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=CHM13_chrY_T0000335;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000335;transcript_name=CHM13_chrY_T0000335;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000335:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2756491	2774145	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=CHM13_chrY_T0000335;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000335;transcript_name=CHM13_chrY_T0000335;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000335:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774146	2774207	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=CHM13_chrY_T0000335;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000335;transcript_name=CHM13_chrY_T0000335;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000335:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2774208	2779235	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=CHM13_chrY_T0000335;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000335;transcript_name=CHM13_chrY_T0000335;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000335:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2779236	2779345	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=CHM13_chrY_T0000335;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000335;transcript_name=CHM13_chrY_T0000335;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000335:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2779346	2788433	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=CHM13_chrY_T0000335;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000335;transcript_name=CHM13_chrY_T0000335;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000335:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2788434	2788499	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=CHM13_chrY_T0000335;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000335;transcript_name=CHM13_chrY_T0000335;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000335:4;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2788500	2797580	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=CHM13_chrY_T0000335;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000335;transcript_name=CHM13_chrY_T0000335;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000335:4;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2797581	2797850	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=CHM13_chrY_T0000335;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000335;transcript_name=CHM13_chrY_T0000335;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000335:5;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680056	2737399	1000	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=CHM13_chrY_T0000336;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000336;gene_name=LINC00278;ID=CHM13_chrY_T0000336;Name=LINC00278
CHM13_chrY	CAT	exon	2680056	2680379	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=CHM13_chrY_T0000336;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000336;transcript_name=CHM13_chrY_T0000336;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000336:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2735811	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=CHM13_chrY_T0000336;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000336;transcript_name=CHM13_chrY_T0000336;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000336:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2735812	2737399	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=CHM13_chrY_T0000336;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000336;transcript_name=CHM13_chrY_T0000336;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000336:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680061	2791008	1000	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=CHM13_chrY_T0000337;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000337;gene_name=LINC00278;ID=CHM13_chrY_T0000337;Name=LINC00278
CHM13_chrY	CAT	exon	2680061	2680379	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=CHM13_chrY_T0000337;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000337;transcript_name=CHM13_chrY_T0000337;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000337:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2735811	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=CHM13_chrY_T0000337;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000337;transcript_name=CHM13_chrY_T0000337;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000337:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2735812	2735939	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=CHM13_chrY_T0000337;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000337;transcript_name=CHM13_chrY_T0000337;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000337:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2735940	2774148	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=CHM13_chrY_T0000337;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000337;transcript_name=CHM13_chrY_T0000337;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000337:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774149	2774207	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=CHM13_chrY_T0000337;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000337;transcript_name=CHM13_chrY_T0000337;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000337:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2774208	2788433	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=CHM13_chrY_T0000337;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000337;transcript_name=CHM13_chrY_T0000337;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000337:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2788434	2788499	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=CHM13_chrY_T0000337;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000337;transcript_name=CHM13_chrY_T0000337;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000337:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2788500	2790820	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=CHM13_chrY_T0000337;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000337;transcript_name=CHM13_chrY_T0000337;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000337:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2790821	2791008	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=CHM13_chrY_T0000337;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000337;transcript_name=CHM13_chrY_T0000337;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000337:4;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680063	2797764	1000	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=CHM13_chrY_T0000338;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000338;gene_name=LINC00278;ID=CHM13_chrY_T0000338;Name=LINC00278
CHM13_chrY	CAT	exon	2680063	2680379	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=CHM13_chrY_T0000338;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000338;transcript_name=CHM13_chrY_T0000338;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000338:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2735811	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=CHM13_chrY_T0000338;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000338;transcript_name=CHM13_chrY_T0000338;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000338:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2735812	2735939	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=CHM13_chrY_T0000338;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000338;transcript_name=CHM13_chrY_T0000338;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000338:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2735940	2756432	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=CHM13_chrY_T0000338;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000338;transcript_name=CHM13_chrY_T0000338;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000338:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2756433	2756490	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=CHM13_chrY_T0000338;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000338;transcript_name=CHM13_chrY_T0000338;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000338:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2756491	2774145	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=CHM13_chrY_T0000338;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000338;transcript_name=CHM13_chrY_T0000338;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000338:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774146	2774207	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=CHM13_chrY_T0000338;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000338;transcript_name=CHM13_chrY_T0000338;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000338:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2774208	2797580	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=CHM13_chrY_T0000338;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000338;transcript_name=CHM13_chrY_T0000338;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000338:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2797581	2797764	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=CHM13_chrY_T0000338;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000338;transcript_name=CHM13_chrY_T0000338;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000338:4;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680063	2838001	1000	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=CHM13_chrY_T0000339;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000339;gene_name=LINC00278;ID=CHM13_chrY_T0000339;Name=LINC00278
CHM13_chrY	CAT	exon	2680063	2680379	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=CHM13_chrY_T0000339;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000339;transcript_name=CHM13_chrY_T0000339;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000339:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2692065	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=CHM13_chrY_T0000339;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000339;transcript_name=CHM13_chrY_T0000339;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000339:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2692066	2692248	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=CHM13_chrY_T0000339;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000339;transcript_name=CHM13_chrY_T0000339;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000339:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2692249	2735811	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=CHM13_chrY_T0000339;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000339;transcript_name=CHM13_chrY_T0000339;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000339:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2735812	2735939	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=CHM13_chrY_T0000339;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000339;transcript_name=CHM13_chrY_T0000339;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000339:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2735940	2774148	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=CHM13_chrY_T0000339;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000339;transcript_name=CHM13_chrY_T0000339;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000339:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774149	2774207	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=CHM13_chrY_T0000339;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000339;transcript_name=CHM13_chrY_T0000339;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000339:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2774208	2837821	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=CHM13_chrY_T0000339;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000339;transcript_name=CHM13_chrY_T0000339;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000339:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2837822	2838001	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=CHM13_chrY_T0000339;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000339;transcript_name=CHM13_chrY_T0000339;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000339:4;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680063	2774725	1000	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=CHM13_chrY_T0000340;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000340;gene_name=LINC00278;ID=CHM13_chrY_T0000340;Name=LINC00278
CHM13_chrY	CAT	exon	2680063	2680379	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=CHM13_chrY_T0000340;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000340;transcript_name=CHM13_chrY_T0000340;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000340:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2735811	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=CHM13_chrY_T0000340;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000340;transcript_name=CHM13_chrY_T0000340;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000340:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2735812	2735939	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=CHM13_chrY_T0000340;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000340;transcript_name=CHM13_chrY_T0000340;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000340:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2735940	2756432	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=CHM13_chrY_T0000340;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000340;transcript_name=CHM13_chrY_T0000340;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000340:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2756433	2756490	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=CHM13_chrY_T0000340;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000340;transcript_name=CHM13_chrY_T0000340;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000340:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2756491	2774145	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=CHM13_chrY_T0000340;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000340;transcript_name=CHM13_chrY_T0000340;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000340:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774146	2774725	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=CHM13_chrY_T0000340;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000340;transcript_name=CHM13_chrY_T0000340;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000340:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680068	2779423	1000	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=CHM13_chrY_T0000341;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000341;gene_name=LINC00278;ID=CHM13_chrY_T0000341;Name=LINC00278
CHM13_chrY	CAT	exon	2680068	2680379	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=CHM13_chrY_T0000341;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000341;transcript_name=CHM13_chrY_T0000341;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000341:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2756432	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=CHM13_chrY_T0000341;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000341;transcript_name=CHM13_chrY_T0000341;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000341:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2756433	2756490	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=CHM13_chrY_T0000341;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000341;transcript_name=CHM13_chrY_T0000341;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000341:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2756491	2774145	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=CHM13_chrY_T0000341;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000341;transcript_name=CHM13_chrY_T0000341;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000341:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774146	2774207	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=CHM13_chrY_T0000341;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000341;transcript_name=CHM13_chrY_T0000341;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000341:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2774208	2779235	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=CHM13_chrY_T0000341;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000341;transcript_name=CHM13_chrY_T0000341;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000341:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2779236	2779423	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=CHM13_chrY_T0000341;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000341;transcript_name=CHM13_chrY_T0000341;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000341:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680068	2774737	1000	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=CHM13_chrY_T0000342;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000342;gene_name=LINC00278;ID=CHM13_chrY_T0000342;Name=LINC00278
CHM13_chrY	CAT	exon	2680068	2680379	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=CHM13_chrY_T0000342;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000342;transcript_name=CHM13_chrY_T0000342;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000342:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2774145	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=CHM13_chrY_T0000342;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000342;transcript_name=CHM13_chrY_T0000342;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000342:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774146	2774737	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=CHM13_chrY_T0000342;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000342;transcript_name=CHM13_chrY_T0000342;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000342:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680074	2797847	1000	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=CHM13_chrY_T0000343;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000343;gene_name=LINC00278;ID=CHM13_chrY_T0000343;Name=LINC00278
CHM13_chrY	CAT	exon	2680074	2680379	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=CHM13_chrY_T0000343;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000343;transcript_name=CHM13_chrY_T0000343;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000343:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2735811	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=CHM13_chrY_T0000343;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000343;transcript_name=CHM13_chrY_T0000343;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000343:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2735812	2735939	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=CHM13_chrY_T0000343;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000343;transcript_name=CHM13_chrY_T0000343;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000343:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2735940	2774145	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=CHM13_chrY_T0000343;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000343;transcript_name=CHM13_chrY_T0000343;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000343:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774146	2774207	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=CHM13_chrY_T0000343;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000343;transcript_name=CHM13_chrY_T0000343;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000343:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2774208	2779235	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=CHM13_chrY_T0000343;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000343;transcript_name=CHM13_chrY_T0000343;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000343:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2779236	2779345	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=CHM13_chrY_T0000343;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000343;transcript_name=CHM13_chrY_T0000343;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000343:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2779346	2788433	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=CHM13_chrY_T0000343;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000343;transcript_name=CHM13_chrY_T0000343;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000343:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2788434	2788499	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=CHM13_chrY_T0000343;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000343;transcript_name=CHM13_chrY_T0000343;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000343:4;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2788500	2797580	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=CHM13_chrY_T0000343;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000343;transcript_name=CHM13_chrY_T0000343;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000343:4;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2797581	2797847	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=CHM13_chrY_T0000343;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000343;transcript_name=CHM13_chrY_T0000343;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000343:5;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680074	2791008	1000	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=CHM13_chrY_T0000344;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000344;gene_name=LINC00278;ID=CHM13_chrY_T0000344;Name=LINC00278
CHM13_chrY	CAT	exon	2680074	2680379	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=CHM13_chrY_T0000344;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000344;transcript_name=CHM13_chrY_T0000344;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000344:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2735811	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=CHM13_chrY_T0000344;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000344;transcript_name=CHM13_chrY_T0000344;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000344:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2735812	2735939	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=CHM13_chrY_T0000344;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000344;transcript_name=CHM13_chrY_T0000344;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000344:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2735940	2788433	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=CHM13_chrY_T0000344;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000344;transcript_name=CHM13_chrY_T0000344;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000344:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2788434	2788499	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=CHM13_chrY_T0000344;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000344;transcript_name=CHM13_chrY_T0000344;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000344:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2788500	2790820	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=CHM13_chrY_T0000344;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000344;transcript_name=CHM13_chrY_T0000344;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000344:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2790821	2791008	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=CHM13_chrY_T0000344;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000344;transcript_name=CHM13_chrY_T0000344;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000344:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680074	2791008	1000	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=CHM13_chrY_T0000345;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000345;gene_name=LINC00278;ID=CHM13_chrY_T0000345;Name=LINC00278
CHM13_chrY	CAT	exon	2680074	2680379	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=CHM13_chrY_T0000345;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000345;transcript_name=CHM13_chrY_T0000345;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000345:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2735811	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=CHM13_chrY_T0000345;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000345;transcript_name=CHM13_chrY_T0000345;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000345:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2735812	2735939	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=CHM13_chrY_T0000345;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000345;transcript_name=CHM13_chrY_T0000345;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000345:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2735940	2756432	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=CHM13_chrY_T0000345;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000345;transcript_name=CHM13_chrY_T0000345;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000345:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2756433	2756490	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=CHM13_chrY_T0000345;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000345;transcript_name=CHM13_chrY_T0000345;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000345:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2756491	2774145	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=CHM13_chrY_T0000345;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000345;transcript_name=CHM13_chrY_T0000345;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000345:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774146	2774207	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=CHM13_chrY_T0000345;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000345;transcript_name=CHM13_chrY_T0000345;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000345:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2774208	2788433	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=CHM13_chrY_T0000345;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000345;transcript_name=CHM13_chrY_T0000345;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000345:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2788434	2788499	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=CHM13_chrY_T0000345;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000345;transcript_name=CHM13_chrY_T0000345;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000345:4;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2788500	2790820	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=CHM13_chrY_T0000345;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000345;transcript_name=CHM13_chrY_T0000345;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000345:4;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2790821	2791008	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=CHM13_chrY_T0000345;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000345;transcript_name=CHM13_chrY_T0000345;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000345:5;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680163	2787466	1000	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=CHM13_chrY_T0000346;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000346;gene_name=LINC00278;ID=CHM13_chrY_T0000346;Name=LINC00278
CHM13_chrY	CAT	exon	2680163	2680379	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=CHM13_chrY_T0000346;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000346;transcript_name=CHM13_chrY_T0000346;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000346:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2735811	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=CHM13_chrY_T0000346;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000346;transcript_name=CHM13_chrY_T0000346;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000346:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2735812	2735939	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=CHM13_chrY_T0000346;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000346;transcript_name=CHM13_chrY_T0000346;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000346:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2735940	2774145	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=CHM13_chrY_T0000346;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000346;transcript_name=CHM13_chrY_T0000346;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000346:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774146	2774207	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=CHM13_chrY_T0000346;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000346;transcript_name=CHM13_chrY_T0000346;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000346:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2774208	2779235	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=CHM13_chrY_T0000346;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000346;transcript_name=CHM13_chrY_T0000346;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000346:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2779236	2779345	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=CHM13_chrY_T0000346;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000346;transcript_name=CHM13_chrY_T0000346;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000346:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2779346	2786968	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=CHM13_chrY_T0000346;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000346;transcript_name=CHM13_chrY_T0000346;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000346:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2786969	2787466	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=CHM13_chrY_T0000346;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000346;transcript_name=CHM13_chrY_T0000346;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000346:4;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	2680171	2788272	1000	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=CHM13_chrY_T0000347;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_G0000068;transcript_name=CHM13_chrY_T0000347;gene_name=LINC00278;ID=CHM13_chrY_T0000347;Name=LINC00278
CHM13_chrY	CAT	exon	2680171	2680379	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=CHM13_chrY_T0000347;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000347;transcript_name=CHM13_chrY_T0000347;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000347:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2680380	2756432	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=CHM13_chrY_T0000347;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000347;transcript_name=CHM13_chrY_T0000347;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000347:0;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2756433	2756490	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=CHM13_chrY_T0000347;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000347;transcript_name=CHM13_chrY_T0000347;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000347:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2756491	2774145	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=CHM13_chrY_T0000347;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000347;transcript_name=CHM13_chrY_T0000347;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000347:1;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2774146	2774207	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=CHM13_chrY_T0000347;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000347;transcript_name=CHM13_chrY_T0000347;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000347:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	2774208	2786968	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=CHM13_chrY_T0000347;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000347;transcript_name=CHM13_chrY_T0000347;gene_name=LINC00278;ID=intron:CHM13_chrY_T0000347:2;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	2786969	2788272	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=CHM13_chrY_T0000347;gene_id=CHM13_chrY_G0000068;Parent=CHM13_chrY_T0000347;transcript_name=CHM13_chrY_T0000347;gene_name=LINC00278;ID=exon:CHM13_chrY_T0000347:3;Name=LINC00278;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	2970957	2971975	.	+	.	source_gene_common_name=AGPAT5P1;source_gene=ENSG00000234652.1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;gene_id=CHM13_chrY_G0000069;gene_biotype=processed_pseudogene;gene_name=AGPAT5P1;gene_sources=liftoff;ID=CHM13_chrY_G0000069;Name=AGPAT5P1
CHM13_chrY	CAT	transcript	2970957	2971975	1000	+	.	source_transcript=ENST00000455855.1;source_transcript_name=AGPAT5P1-201;source_gene=ENSG00000234652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455855.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455855.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGPAT5P1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;transcript_id=CHM13_chrY_T0000348;gene_id=CHM13_chrY_G0000069;Parent=CHM13_chrY_G0000069;transcript_name=CHM13_chrY_T0000348;gene_name=AGPAT5P1;ID=CHM13_chrY_T0000348;Name=AGPAT5P1
CHM13_chrY	CAT	exon	2970957	2971975	.	+	.	source_transcript=ENST00000455855.1;source_transcript_name=AGPAT5P1-201;source_gene=ENSG00000234652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455855.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455855.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGPAT5P1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;transcript_id=CHM13_chrY_T0000348;gene_id=CHM13_chrY_G0000069;Parent=CHM13_chrY_T0000348;transcript_name=CHM13_chrY_T0000348;gene_name=AGPAT5P1;ID=exon:CHM13_chrY_T0000348:0;Name=AGPAT5P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	3226845	3227003	.	-	.	source_gene_common_name=PRRC2CP1;source_gene=ENSG00000216777.1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;gene_id=CHM13_chrY_G0000070;gene_biotype=processed_pseudogene;gene_name=PRRC2CP1;gene_sources=liftoff;ID=CHM13_chrY_G0000070;Name=PRRC2CP1
CHM13_chrY	CAT	transcript	3226845	3227003	1000	-	.	source_transcript=ENST00000404428.1;source_transcript_name=PRRC2CP1-201;source_gene=ENSG00000216777.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216777.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000404428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000404428.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRRC2CP1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;transcript_id=CHM13_chrY_T0000349;gene_id=CHM13_chrY_G0000070;Parent=CHM13_chrY_G0000070;transcript_name=CHM13_chrY_T0000349;gene_name=PRRC2CP1;ID=CHM13_chrY_T0000349;Name=PRRC2CP1
CHM13_chrY	CAT	exon	3226845	3227003	.	-	.	source_transcript=ENST00000404428.1;source_transcript_name=PRRC2CP1-201;source_gene=ENSG00000216777.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216777.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000404428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000404428.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRRC2CP1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;transcript_id=CHM13_chrY_T0000349;gene_id=CHM13_chrY_G0000070;Parent=CHM13_chrY_T0000349;transcript_name=CHM13_chrY_T0000349;gene_name=PRRC2CP1;ID=exon:CHM13_chrY_T0000349:0;Name=PRRC2CP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	3256268	3257242	.	+	.	source_gene_common_name=TGIF2LY;source_gene=ENSG00000176679.9;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;gene_id=CHM13_chrY_G0000071;gene_biotype=protein_coding;gene_name=TGIF2LY;gene_sources=liftoff;ID=CHM13_chrY_G0000071;Name=TGIF2LY
CHM13_chrY	CAT	transcript	3256268	3257242	100	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=CHM13_chrY_T0000350;gene_id=CHM13_chrY_G0000071;Parent=CHM13_chrY_G0000071;transcript_name=CHM13_chrY_T0000350;gene_name=TGIF2LY;ID=CHM13_chrY_T0000350;Name=TGIF2LY
CHM13_chrY	CAT	exon	3256268	3256328	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=CHM13_chrY_T0000350;gene_id=CHM13_chrY_G0000071;Parent=CHM13_chrY_T0000350;transcript_name=CHM13_chrY_T0000350;gene_name=TGIF2LY;ID=exon:CHM13_chrY_T0000350:0;Name=TGIF2LY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3256329	3256424	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=CHM13_chrY_T0000350;gene_id=CHM13_chrY_G0000071;Parent=CHM13_chrY_T0000350;transcript_name=CHM13_chrY_T0000350;gene_name=TGIF2LY;ID=intron:CHM13_chrY_T0000350:0;Name=TGIF2LY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3256425	3257242	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=CHM13_chrY_T0000350;gene_id=CHM13_chrY_G0000071;Parent=CHM13_chrY_T0000350;transcript_name=CHM13_chrY_T0000350;gene_name=TGIF2LY;ID=exon:CHM13_chrY_T0000350:1;Name=TGIF2LY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	3256446	3257003	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=CHM13_chrY_T0000350;gene_id=CHM13_chrY_G0000071;Parent=CHM13_chrY_T0000350;transcript_name=CHM13_chrY_T0000350;gene_name=TGIF2LY;ID=CDS:CHM13_chrY_T0000350:0;Name=TGIF2LY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	3256446	3256448	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=CHM13_chrY_T0000350;gene_id=CHM13_chrY_G0000071;Parent=CHM13_chrY_T0000350;transcript_name=CHM13_chrY_T0000350;gene_name=TGIF2LY;ID=start_codon:CHM13_chrY_T0000350;Name=TGIF2LY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	3257001	3257003	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=CHM13_chrY_T0000350;gene_id=CHM13_chrY_G0000071;Parent=CHM13_chrY_T0000350;transcript_name=CHM13_chrY_T0000350;gene_name=TGIF2LY;ID=stop_codon:CHM13_chrY_T0000350;Name=TGIF2LY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	3256316	3257242	100	+	.	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=CHM13_chrY_T0000351;gene_id=CHM13_chrY_G0000071;Parent=CHM13_chrY_G0000071;transcript_name=CHM13_chrY_T0000351;gene_name=TGIF2LY;ID=CHM13_chrY_T0000351;Name=TGIF2LY
CHM13_chrY	CAT	exon	3256316	3257242	.	+	.	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=CHM13_chrY_T0000351;gene_id=CHM13_chrY_G0000071;Parent=CHM13_chrY_T0000351;transcript_name=CHM13_chrY_T0000351;gene_name=TGIF2LY;ID=exon:CHM13_chrY_T0000351:0;Name=TGIF2LY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	3256446	3257003	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=CHM13_chrY_T0000351;gene_id=CHM13_chrY_G0000071;Parent=CHM13_chrY_T0000351;transcript_name=CHM13_chrY_T0000351;gene_name=TGIF2LY;ID=CDS:CHM13_chrY_T0000351:0;Name=TGIF2LY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	3256446	3256448	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=CHM13_chrY_T0000351;gene_id=CHM13_chrY_G0000071;Parent=CHM13_chrY_T0000351;transcript_name=CHM13_chrY_T0000351;gene_name=TGIF2LY;ID=start_codon:CHM13_chrY_T0000351;Name=TGIF2LY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	3257001	3257003	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=CHM13_chrY_T0000351;gene_id=CHM13_chrY_G0000071;Parent=CHM13_chrY_T0000351;transcript_name=CHM13_chrY_T0000351;gene_name=TGIF2LY;ID=stop_codon:CHM13_chrY_T0000351;Name=TGIF2LY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	3360010	3361073	.	+	.	source_gene_common_name=USP12PY;source_gene=ENSG00000232927.1;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;gene_id=CHM13_chrY_G0000072;gene_biotype=processed_pseudogene;gene_name=USP12PY;gene_sources=liftoff;ID=CHM13_chrY_G0000072;Name=USP12PY
CHM13_chrY	CAT	transcript	3360010	3361073	1000	+	.	source_transcript=ENST00000427677.1;source_transcript_name=USP12PY-201;source_gene=ENSG00000232927.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232927.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427677.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP12PY;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;transcript_id=CHM13_chrY_T0000352;gene_id=CHM13_chrY_G0000072;Parent=CHM13_chrY_G0000072;transcript_name=CHM13_chrY_T0000352;gene_name=USP12PY;ID=CHM13_chrY_T0000352;Name=USP12PY
CHM13_chrY	CAT	exon	3360010	3361073	.	+	.	source_transcript=ENST00000427677.1;source_transcript_name=USP12PY-201;source_gene=ENSG00000232927.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232927.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427677.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP12PY;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;transcript_id=CHM13_chrY_T0000352;gene_id=CHM13_chrY_G0000072;Parent=CHM13_chrY_T0000352;transcript_name=CHM13_chrY_T0000352;gene_name=USP12PY;ID=exon:CHM13_chrY_T0000352:0;Name=USP12PY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	3453402	3542090	.	+	.	source_gene_common_name=ENSG00000286050;source_gene=ENSG00000286050.2;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;gene_id=CHM13_chrY_G0000073;gene_biotype=lncRNA;gene_name=ENSG00000286050;gene_sources=liftoff;ID=CHM13_chrY_G0000073;Name=ENSG00000286050
CHM13_chrY	CAT	transcript	3453402	3511705	1000	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=CHM13_chrY_T0000353;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_G0000073;transcript_name=CHM13_chrY_T0000353;gene_name=ENSG00000286050;ID=CHM13_chrY_T0000353;Name=ENSG00000286050
CHM13_chrY	CAT	exon	3453402	3453546	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=CHM13_chrY_T0000353;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000353;transcript_name=CHM13_chrY_T0000353;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000353:0;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3453547	3481013	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=CHM13_chrY_T0000353;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000353;transcript_name=CHM13_chrY_T0000353;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000353:0;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3481014	3481137	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=CHM13_chrY_T0000353;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000353;transcript_name=CHM13_chrY_T0000353;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000353:1;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3481138	3481569	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=CHM13_chrY_T0000353;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000353;transcript_name=CHM13_chrY_T0000353;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000353:1;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3481570	3481681	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=CHM13_chrY_T0000353;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000353;transcript_name=CHM13_chrY_T0000353;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000353:2;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3481682	3509599	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=CHM13_chrY_T0000353;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000353;transcript_name=CHM13_chrY_T0000353;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000353:2;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3509600	3509654	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=CHM13_chrY_T0000353;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000353;transcript_name=CHM13_chrY_T0000353;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000353:3;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3509655	3511550	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=CHM13_chrY_T0000353;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000353;transcript_name=CHM13_chrY_T0000353;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000353:3;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3511551	3511705	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=CHM13_chrY_T0000353;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000353;transcript_name=CHM13_chrY_T0000353;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000353:4;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	3463483	3542090	1000	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=CHM13_chrY_T0000355;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_G0000073;transcript_name=CHM13_chrY_T0000355;gene_name=ENSG00000286050;ID=CHM13_chrY_T0000355;Name=ENSG00000286050
CHM13_chrY	CAT	exon	3463483	3463591	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=CHM13_chrY_T0000355;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000355;transcript_name=CHM13_chrY_T0000355;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000355:0;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3463592	3481013	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=CHM13_chrY_T0000355;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000355;transcript_name=CHM13_chrY_T0000355;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000355:0;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3481014	3481137	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=CHM13_chrY_T0000355;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000355;transcript_name=CHM13_chrY_T0000355;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000355:1;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3481138	3481569	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=CHM13_chrY_T0000355;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000355;transcript_name=CHM13_chrY_T0000355;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000355:1;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3481570	3481681	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=CHM13_chrY_T0000355;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000355;transcript_name=CHM13_chrY_T0000355;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000355:2;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3481682	3540770	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=CHM13_chrY_T0000355;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000355;transcript_name=CHM13_chrY_T0000355;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000355:2;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3540771	3540891	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=CHM13_chrY_T0000355;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000355;transcript_name=CHM13_chrY_T0000355;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000355:3;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3540892	3541029	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=CHM13_chrY_T0000355;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000355;transcript_name=CHM13_chrY_T0000355;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000355:3;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3541030	3541123	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=CHM13_chrY_T0000355;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000355;transcript_name=CHM13_chrY_T0000355;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000355:4;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3541124	3541589	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=CHM13_chrY_T0000355;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000355;transcript_name=CHM13_chrY_T0000355;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000355:4;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3541590	3542090	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=CHM13_chrY_T0000355;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000355;transcript_name=CHM13_chrY_T0000355;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000355:5;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	3463484	3513960	1000	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=CHM13_chrY_T0000356;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_G0000073;transcript_name=CHM13_chrY_T0000356;gene_name=ENSG00000286050;ID=CHM13_chrY_T0000356;Name=ENSG00000286050
CHM13_chrY	CAT	exon	3463484	3463591	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=CHM13_chrY_T0000356;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000356;transcript_name=CHM13_chrY_T0000356;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000356:0;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3463592	3481013	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=CHM13_chrY_T0000356;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000356;transcript_name=CHM13_chrY_T0000356;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000356:0;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3481014	3481137	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=CHM13_chrY_T0000356;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000356;transcript_name=CHM13_chrY_T0000356;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000356:1;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3481138	3481569	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=CHM13_chrY_T0000356;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000356;transcript_name=CHM13_chrY_T0000356;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000356:1;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3481570	3481681	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=CHM13_chrY_T0000356;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000356;transcript_name=CHM13_chrY_T0000356;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000356:2;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3481682	3512656	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=CHM13_chrY_T0000356;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000356;transcript_name=CHM13_chrY_T0000356;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000356:2;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3512657	3512726	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=CHM13_chrY_T0000356;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000356;transcript_name=CHM13_chrY_T0000356;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000356:3;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3512727	3513186	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=CHM13_chrY_T0000356;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000356;transcript_name=CHM13_chrY_T0000356;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000356:3;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3513187	3513960	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=CHM13_chrY_T0000356;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000356;transcript_name=CHM13_chrY_T0000356;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000356:4;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	3463546	3513958	1000	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=CHM13_chrY_T0000357;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_G0000073;transcript_name=CHM13_chrY_T0000357;gene_name=ENSG00000286050;ID=CHM13_chrY_T0000357;Name=ENSG00000286050
CHM13_chrY	CAT	exon	3463546	3463591	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=CHM13_chrY_T0000357;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000357;transcript_name=CHM13_chrY_T0000357;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000357:0;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3463592	3477835	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=CHM13_chrY_T0000357;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000357;transcript_name=CHM13_chrY_T0000357;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000357:0;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3477836	3477931	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=CHM13_chrY_T0000357;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000357;transcript_name=CHM13_chrY_T0000357;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000357:1;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3477932	3481013	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=CHM13_chrY_T0000357;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000357;transcript_name=CHM13_chrY_T0000357;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000357:1;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3481014	3481137	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=CHM13_chrY_T0000357;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000357;transcript_name=CHM13_chrY_T0000357;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000357:2;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3481138	3481569	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=CHM13_chrY_T0000357;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000357;transcript_name=CHM13_chrY_T0000357;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000357:2;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3481570	3481681	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=CHM13_chrY_T0000357;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000357;transcript_name=CHM13_chrY_T0000357;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000357:3;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3481682	3512656	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=CHM13_chrY_T0000357;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000357;transcript_name=CHM13_chrY_T0000357;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000357:3;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3512657	3512726	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=CHM13_chrY_T0000357;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000357;transcript_name=CHM13_chrY_T0000357;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000357:4;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3512727	3513186	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=CHM13_chrY_T0000357;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000357;transcript_name=CHM13_chrY_T0000357;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000357:4;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3513187	3513958	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=CHM13_chrY_T0000357;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000357;transcript_name=CHM13_chrY_T0000357;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000357:5;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	3477874	3511705	1000	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=CHM13_chrY_T0000358;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_G0000073;transcript_name=CHM13_chrY_T0000358;gene_name=ENSG00000286050;ID=CHM13_chrY_T0000358;Name=ENSG00000286050
CHM13_chrY	CAT	exon	3477874	3477931	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=CHM13_chrY_T0000358;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000358;transcript_name=CHM13_chrY_T0000358;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000358:0;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3477932	3481013	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=CHM13_chrY_T0000358;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000358;transcript_name=CHM13_chrY_T0000358;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000358:0;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3481014	3481137	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=CHM13_chrY_T0000358;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000358;transcript_name=CHM13_chrY_T0000358;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000358:1;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3481138	3481569	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=CHM13_chrY_T0000358;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000358;transcript_name=CHM13_chrY_T0000358;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000358:1;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3481570	3481681	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=CHM13_chrY_T0000358;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000358;transcript_name=CHM13_chrY_T0000358;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000358:2;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3481682	3509599	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=CHM13_chrY_T0000358;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000358;transcript_name=CHM13_chrY_T0000358;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000358:2;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3509600	3509654	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=CHM13_chrY_T0000358;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000358;transcript_name=CHM13_chrY_T0000358;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000358:3;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3509655	3511550	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=CHM13_chrY_T0000358;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000358;transcript_name=CHM13_chrY_T0000358;gene_name=ENSG00000286050;ID=intron:CHM13_chrY_T0000358:3;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3511551	3511705	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=CHM13_chrY_T0000358;gene_id=CHM13_chrY_G0000073;Parent=CHM13_chrY_T0000358;transcript_name=CHM13_chrY_T0000358;gene_name=ENSG00000286050;ID=exon:CHM13_chrY_T0000358:4;Name=ENSG00000286050;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	3455198	3456747	.	-	.	source_gene_common_name=RNF19BPY;source_gene=ENSG00000225653.1;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;gene_id=CHM13_chrY_G0000074;gene_biotype=processed_pseudogene;gene_name=RNF19BPY;gene_sources=liftoff;ID=CHM13_chrY_G0000074;Name=RNF19BPY
CHM13_chrY	CAT	transcript	3455198	3456747	1000	-	.	source_transcript=ENST00000458209.1;source_transcript_name=RNF19BPY-201;source_gene=ENSG00000225653.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225653.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458209.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNF19BPY;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;transcript_id=CHM13_chrY_T0000354;gene_id=CHM13_chrY_G0000074;Parent=CHM13_chrY_G0000074;transcript_name=CHM13_chrY_T0000354;gene_name=RNF19BPY;ID=CHM13_chrY_T0000354;Name=RNF19BPY
CHM13_chrY	CAT	exon	3455198	3456747	.	-	.	source_transcript=ENST00000458209.1;source_transcript_name=RNF19BPY-201;source_gene=ENSG00000225653.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225653.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNF19BPY;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;transcript_id=CHM13_chrY_T0000354;gene_id=CHM13_chrY_G0000074;Parent=CHM13_chrY_T0000354;transcript_name=CHM13_chrY_T0000354;gene_name=RNF19BPY;ID=exon:CHM13_chrY_T0000354:0;Name=RNF19BPY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	3528417	3530062	.	-	.	source_gene_common_name=ENSG00000218410;source_gene=ENSG00000218410.1;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;gene_id=CHM13_chrY_G0000075;gene_biotype=processed_pseudogene;gene_name=ENSG00000218410;gene_sources=liftoff;ID=CHM13_chrY_G0000075;Name=ENSG00000218410
CHM13_chrY	CAT	transcript	3528417	3530062	1000	-	.	source_transcript=ENST00000405035.1;source_transcript_name=ENST00000405035;source_gene=ENSG00000218410.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000218410.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000405035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000405035.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000218410;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;transcript_id=CHM13_chrY_T0000359;gene_id=CHM13_chrY_G0000075;Parent=CHM13_chrY_G0000075;transcript_name=CHM13_chrY_T0000359;gene_name=ENSG00000218410;ID=CHM13_chrY_T0000359;Name=ENSG00000218410
CHM13_chrY	CAT	exon	3528417	3530062	.	-	.	source_transcript=ENST00000405035.1;source_transcript_name=ENST00000405035;source_gene=ENSG00000218410.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000218410.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000405035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000405035.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000218410;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;transcript_id=CHM13_chrY_T0000359;gene_id=CHM13_chrY_G0000075;Parent=CHM13_chrY_T0000359;transcript_name=CHM13_chrY_T0000359;gene_name=ENSG00000218410;ID=exon:CHM13_chrY_T0000359:0;Name=ENSG00000218410;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	3543499	3543915	.	-	.	source_gene_common_name=UBE2V1P3;source_gene=ENSG00000229518.1;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;gene_id=CHM13_chrY_G0000076;gene_biotype=processed_pseudogene;gene_name=UBE2V1P3;gene_sources=liftoff;ID=CHM13_chrY_G0000076;Name=UBE2V1P3
CHM13_chrY	CAT	transcript	3543499	3543915	1000	-	.	source_transcript=ENST00000439651.1;source_transcript_name=UBE2V1P3-201;source_gene=ENSG00000229518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439651.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439651.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2V1P3;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;transcript_id=CHM13_chrY_T0000360;gene_id=CHM13_chrY_G0000076;Parent=CHM13_chrY_G0000076;transcript_name=CHM13_chrY_T0000360;gene_name=UBE2V1P3;ID=CHM13_chrY_T0000360;Name=UBE2V1P3
CHM13_chrY	CAT	exon	3543499	3543915	.	-	.	source_transcript=ENST00000439651.1;source_transcript_name=UBE2V1P3-201;source_gene=ENSG00000229518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439651.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439651.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2V1P3;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;transcript_id=CHM13_chrY_T0000360;gene_id=CHM13_chrY_G0000076;Parent=CHM13_chrY_T0000360;transcript_name=CHM13_chrY_T0000360;gene_name=UBE2V1P3;ID=exon:CHM13_chrY_T0000360:0;Name=UBE2V1P3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	3715821	3780106	.	+	.	source_gene_common_name=ENSG00000229308;source_gene=ENSG00000229308.2;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;gene_id=CHM13_chrY_G0000077;gene_biotype=lncRNA;gene_name=ENSG00000229308;gene_sources=liftoff;ID=CHM13_chrY_G0000077;Name=ENSG00000229308
CHM13_chrY	CAT	transcript	3715821	3780106	1000	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=CHM13_chrY_T0000361;gene_id=CHM13_chrY_G0000077;Parent=CHM13_chrY_G0000077;transcript_name=CHM13_chrY_T0000361;gene_name=ENSG00000229308;ID=CHM13_chrY_T0000361;Name=ENSG00000229308
CHM13_chrY	CAT	exon	3715821	3715885	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=CHM13_chrY_T0000361;gene_id=CHM13_chrY_G0000077;Parent=CHM13_chrY_T0000361;transcript_name=CHM13_chrY_T0000361;gene_name=ENSG00000229308;ID=exon:CHM13_chrY_T0000361:0;Name=ENSG00000229308;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3715886	3779472	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=CHM13_chrY_T0000361;gene_id=CHM13_chrY_G0000077;Parent=CHM13_chrY_T0000361;transcript_name=CHM13_chrY_T0000361;gene_name=ENSG00000229308;ID=intron:CHM13_chrY_T0000361:0;Name=ENSG00000229308;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3779473	3780106	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=CHM13_chrY_T0000361;gene_id=CHM13_chrY_G0000077;Parent=CHM13_chrY_T0000361;transcript_name=CHM13_chrY_T0000361;gene_name=ENSG00000229308;ID=exon:CHM13_chrY_T0000361:1;Name=ENSG00000229308;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	3715938	3780106	1000	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=CHM13_chrY_T0000362;gene_id=CHM13_chrY_G0000077;Parent=CHM13_chrY_G0000077;transcript_name=CHM13_chrY_T0000362;gene_name=ENSG00000229308;ID=CHM13_chrY_T0000362;Name=ENSG00000229308
CHM13_chrY	CAT	exon	3715938	3716206	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=CHM13_chrY_T0000362;gene_id=CHM13_chrY_G0000077;Parent=CHM13_chrY_T0000362;transcript_name=CHM13_chrY_T0000362;gene_name=ENSG00000229308;ID=exon:CHM13_chrY_T0000362:0;Name=ENSG00000229308;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	3716207	3779472	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=CHM13_chrY_T0000362;gene_id=CHM13_chrY_G0000077;Parent=CHM13_chrY_T0000362;transcript_name=CHM13_chrY_T0000362;gene_name=ENSG00000229308;ID=intron:CHM13_chrY_T0000362:0;Name=ENSG00000229308;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	3779473	3780106	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=CHM13_chrY_T0000362;gene_id=CHM13_chrY_G0000077;Parent=CHM13_chrY_T0000362;transcript_name=CHM13_chrY_T0000362;gene_name=ENSG00000229308;ID=exon:CHM13_chrY_T0000362:1;Name=ENSG00000229308;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	3854466	3854571	.	-	.	source_gene_common_name=RNU6-303P;source_gene=ENSG00000252900.1;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;gene_id=CHM13_chrY_G0000078;gene_biotype=snRNA;gene_name=RNU6-303P;gene_sources=liftoff;ID=CHM13_chrY_G0000078;Name=RNU6-303P
CHM13_chrY	CAT	transcript	3854466	3854571	1000	-	.	source_transcript=ENST00000517091.1;source_transcript_name=RNU6-303P-201;source_gene=ENSG00000252900.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252900.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517091.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-303P;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;transcript_id=CHM13_chrY_T0000363;gene_id=CHM13_chrY_G0000078;Parent=CHM13_chrY_G0000078;transcript_name=CHM13_chrY_T0000363;gene_name=RNU6-303P;ID=CHM13_chrY_T0000363;Name=RNU6-303P
CHM13_chrY	CAT	exon	3854466	3854571	.	-	.	source_transcript=ENST00000517091.1;source_transcript_name=RNU6-303P-201;source_gene=ENSG00000252900.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252900.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517091.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-303P;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;transcript_id=CHM13_chrY_T0000363;gene_id=CHM13_chrY_G0000078;Parent=CHM13_chrY_T0000363;transcript_name=CHM13_chrY_T0000363;gene_name=RNU6-303P;ID=exon:CHM13_chrY_T0000363:0;Name=RNU6-303P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	4481187	4482350	.	-	.	source_gene_common_name=SERBP1P2;source_gene=ENSG00000225878.1;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;gene_id=CHM13_chrY_G0000079;gene_biotype=processed_pseudogene;gene_name=SERBP1P2;gene_sources=liftoff;ID=CHM13_chrY_G0000079;Name=SERBP1P2
CHM13_chrY	CAT	transcript	4481187	4482350	1000	-	.	source_transcript=ENST00000436888.1;source_transcript_name=SERBP1P2-201;source_gene=ENSG00000225878.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225878.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436888.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SERBP1P2;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;transcript_id=CHM13_chrY_T0000364;gene_id=CHM13_chrY_G0000079;Parent=CHM13_chrY_G0000079;transcript_name=CHM13_chrY_T0000364;gene_name=SERBP1P2;ID=CHM13_chrY_T0000364;Name=SERBP1P2
CHM13_chrY	CAT	exon	4481187	4482350	.	-	.	source_transcript=ENST00000436888.1;source_transcript_name=SERBP1P2-201;source_gene=ENSG00000225878.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225878.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436888.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SERBP1P2;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;transcript_id=CHM13_chrY_T0000364;gene_id=CHM13_chrY_G0000079;Parent=CHM13_chrY_T0000364;transcript_name=CHM13_chrY_T0000364;gene_name=SERBP1P2;ID=exon:CHM13_chrY_T0000364:0;Name=SERBP1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	4672886	4679736	.	-	.	source_gene_common_name=ENSG00000277930;source_gene=ENSG00000277930.2;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;gene_id=CHM13_chrY_G0000080;gene_biotype=lncRNA;gene_name=ENSG00000277930;gene_sources=liftoff;ID=CHM13_chrY_G0000080;Name=ENSG00000277930
CHM13_chrY	CAT	transcript	4672886	4679168	1000	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=CHM13_chrY_T0000365;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_G0000080;transcript_name=CHM13_chrY_T0000365;gene_name=ENSG00000277930;ID=CHM13_chrY_T0000365;Name=ENSG00000277930
CHM13_chrY	CAT	exon	4672886	4673740	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=CHM13_chrY_T0000365;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_T0000365;transcript_name=CHM13_chrY_T0000365;gene_name=ENSG00000277930;ID=exon:CHM13_chrY_T0000365:0;Name=ENSG00000277930;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4673741	4677020	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=CHM13_chrY_T0000365;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_T0000365;transcript_name=CHM13_chrY_T0000365;gene_name=ENSG00000277930;ID=intron:CHM13_chrY_T0000365:0;Name=ENSG00000277930;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4677021	4677194	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=CHM13_chrY_T0000365;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_T0000365;transcript_name=CHM13_chrY_T0000365;gene_name=ENSG00000277930;ID=exon:CHM13_chrY_T0000365:1;Name=ENSG00000277930;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4677195	4678902	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=CHM13_chrY_T0000365;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_T0000365;transcript_name=CHM13_chrY_T0000365;gene_name=ENSG00000277930;ID=intron:CHM13_chrY_T0000365:1;Name=ENSG00000277930;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4678903	4679168	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=CHM13_chrY_T0000365;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_T0000365;transcript_name=CHM13_chrY_T0000365;gene_name=ENSG00000277930;ID=exon:CHM13_chrY_T0000365:2;Name=ENSG00000277930;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	4672886	4679736	1000	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=CHM13_chrY_T0000366;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_G0000080;transcript_name=CHM13_chrY_T0000366;gene_name=ENSG00000277930;ID=CHM13_chrY_T0000366;Name=ENSG00000277930
CHM13_chrY	CAT	exon	4672886	4673740	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=CHM13_chrY_T0000366;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_T0000366;transcript_name=CHM13_chrY_T0000366;gene_name=ENSG00000277930;ID=exon:CHM13_chrY_T0000366:0;Name=ENSG00000277930;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4673741	4677020	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=CHM13_chrY_T0000366;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_T0000366;transcript_name=CHM13_chrY_T0000366;gene_name=ENSG00000277930;ID=intron:CHM13_chrY_T0000366:0;Name=ENSG00000277930;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4677021	4677194	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=CHM13_chrY_T0000366;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_T0000366;transcript_name=CHM13_chrY_T0000366;gene_name=ENSG00000277930;ID=exon:CHM13_chrY_T0000366:1;Name=ENSG00000277930;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4677195	4679539	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=CHM13_chrY_T0000366;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_T0000366;transcript_name=CHM13_chrY_T0000366;gene_name=ENSG00000277930;ID=intron:CHM13_chrY_T0000366:1;Name=ENSG00000277930;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4679540	4679736	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=CHM13_chrY_T0000366;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_T0000366;transcript_name=CHM13_chrY_T0000366;gene_name=ENSG00000277930;ID=exon:CHM13_chrY_T0000366:2;Name=ENSG00000277930;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	4673372	4677233	1000	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=CHM13_chrY_T0000367;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_G0000080;transcript_name=CHM13_chrY_T0000367;gene_name=ENSG00000277930;ID=CHM13_chrY_T0000367;Name=ENSG00000277930
CHM13_chrY	CAT	exon	4673372	4673740	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=CHM13_chrY_T0000367;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_T0000367;transcript_name=CHM13_chrY_T0000367;gene_name=ENSG00000277930;ID=exon:CHM13_chrY_T0000367:0;Name=ENSG00000277930;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4673741	4677020	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=CHM13_chrY_T0000367;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_T0000367;transcript_name=CHM13_chrY_T0000367;gene_name=ENSG00000277930;ID=intron:CHM13_chrY_T0000367:0;Name=ENSG00000277930;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4677021	4677233	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=CHM13_chrY_T0000367;gene_id=CHM13_chrY_G0000080;Parent=CHM13_chrY_T0000367;transcript_name=CHM13_chrY_T0000367;gene_name=ENSG00000277930;ID=exon:CHM13_chrY_T0000367:1;Name=ENSG00000277930;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	4679744	5422248	.	+	.	source_gene_common_name=PCDH11Y;source_gene=ENSG00000099715.15;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;gene_id=CHM13_chrY_G0000081;gene_biotype=protein_coding;gene_name=PCDH11Y;gene_sources=liftoff;ID=CHM13_chrY_G0000081;Name=PCDH11Y
CHM13_chrY	CAT	transcript	4679744	4784979	100	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_G0000081;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=CHM13_chrY_T0000368;Name=PCDH11Y
CHM13_chrY	CAT	exon	4679744	4680123	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000368:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4680124	4711435	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000368:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4711436	4711541	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000368:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4711542	4712199	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000368:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4712200	4712258	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000368:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4712227	4712258	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000368:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	4712227	4712229	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=start_codon:CHM13_chrY_T0000368;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4712259	4736418	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000368:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4736419	4736989	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000368:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4736419	4736989	.	+	1	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000368:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4736990	4777749	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000368:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4777750	4780242	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000368:4;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4777750	4780242	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000368:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4780243	4783878	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000368:4;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4783879	4784979	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000368:5;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4783879	4783896	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000368:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	4783894	4783896	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=CHM13_chrY_T0000368;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000368;transcript_name=CHM13_chrY_T0000368;gene_name=PCDH11Y;ID=stop_codon:CHM13_chrY_T0000368;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	4679814	4784994	100	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_G0000081;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=CHM13_chrY_T0000369;Name=PCDH11Y
CHM13_chrY	CAT	exon	4679814	4680123	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000369:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4680124	4710428	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000369:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4710429	4710597	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000369:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4710598	4711435	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000369:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4711436	4711541	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000369:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4711542	4712199	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000369:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4712200	4712258	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000369:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4712227	4712258	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000369:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	4712227	4712229	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=start_codon:CHM13_chrY_T0000369;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4712259	4736418	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000369:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4736419	4736989	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000369:4;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4736419	4736989	.	+	1	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000369:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4736990	4777749	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000369:4;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4777750	4780242	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000369:5;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4777750	4780242	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000369:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4780243	4783878	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000369:5;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4783879	4784994	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000369:6;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4783879	4783896	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000369:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	4783894	4783896	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=CHM13_chrY_T0000369;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000369;transcript_name=CHM13_chrY_T0000369;gene_name=PCDH11Y;ID=stop_codon:CHM13_chrY_T0000369;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	4679814	5422248	100	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_G0000081;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=CHM13_chrY_T0000370;Name=PCDH11Y
CHM13_chrY	CAT	exon	4679814	4680123	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000370:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4680124	4736418	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000370:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4736419	4736989	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000370:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4736630	4736989	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000370:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	4736630	4736632	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=start_codon:CHM13_chrY_T0000370;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4736990	4777749	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000370:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4777750	4780242	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000370:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4777750	4780242	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000370:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4780243	5180622	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000370:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5180623	5180821	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000370:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	5180623	5180821	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000370:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5180822	5261782	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000370:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5261783	5261806	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000370:4;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	5261783	5261806	.	+	2	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000370:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5261807	5417295	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000370:4;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5417296	5422248	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000370:5;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	5417296	5417966	.	+	2	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000370:4;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	5417964	5417966	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=CHM13_chrY_T0000370;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000370;transcript_name=CHM13_chrY_T0000370;gene_name=PCDH11Y;ID=stop_codon:CHM13_chrY_T0000370;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	4679814	4779800	100	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_G0000081;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=CHM13_chrY_T0000371;Name=PCDH11Y
CHM13_chrY	CAT	exon	4679814	4680123	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000371:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4680124	4710428	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000371:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4710429	4710597	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000371:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4710598	4710744	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000371:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4710745	4710876	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000371:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4710877	4711435	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000371:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4711436	4711541	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000371:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4711542	4712199	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000371:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4712200	4712258	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000371:4;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4712227	4712258	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000371:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	4712227	4712229	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=start_codon:CHM13_chrY_T0000371;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4712259	4736418	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000371:4;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4736419	4736989	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000371:5;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4736419	4736989	.	+	1	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000371:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4736990	4777749	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000371:5;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4777750	4779800	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000371:6;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4777750	4779800	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=CHM13_chrY_T0000371;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000371;transcript_name=CHM13_chrY_T0000371;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000371:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	4679908	4711477	1000	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=CHM13_chrY_T0000372;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_G0000081;transcript_name=CHM13_chrY_T0000372;gene_name=PCDH11Y;ID=CHM13_chrY_T0000372;Name=PCDH11Y
CHM13_chrY	CAT	exon	4679908	4680123	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=CHM13_chrY_T0000372;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000372;transcript_name=CHM13_chrY_T0000372;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000372:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4680124	4682205	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=CHM13_chrY_T0000372;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000372;transcript_name=CHM13_chrY_T0000372;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000372:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4682206	4682276	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=CHM13_chrY_T0000372;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000372;transcript_name=CHM13_chrY_T0000372;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000372:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4682277	4711435	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=CHM13_chrY_T0000372;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000372;transcript_name=CHM13_chrY_T0000372;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000372:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4711436	4711477	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=CHM13_chrY_T0000372;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000372;transcript_name=CHM13_chrY_T0000372;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000372:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	4679918	4736618	100	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=CHM13_chrY_T0000373;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_G0000081;transcript_name=CHM13_chrY_T0000373;gene_name=PCDH11Y;ID=CHM13_chrY_T0000373;Name=PCDH11Y
CHM13_chrY	CAT	exon	4679918	4680123	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=CHM13_chrY_T0000373;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000373;transcript_name=CHM13_chrY_T0000373;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000373:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4680124	4682205	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=CHM13_chrY_T0000373;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000373;transcript_name=CHM13_chrY_T0000373;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000373:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4682206	4682276	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=CHM13_chrY_T0000373;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000373;transcript_name=CHM13_chrY_T0000373;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000373:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4682277	4712199	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=CHM13_chrY_T0000373;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000373;transcript_name=CHM13_chrY_T0000373;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000373:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4712200	4712258	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=CHM13_chrY_T0000373;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000373;transcript_name=CHM13_chrY_T0000373;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000373:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4712227	4712258	.	+	0	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=CHM13_chrY_T0000373;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000373;transcript_name=CHM13_chrY_T0000373;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000373:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	4712227	4712229	.	+	0	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=CHM13_chrY_T0000373;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000373;transcript_name=CHM13_chrY_T0000373;gene_name=PCDH11Y;ID=start_codon:CHM13_chrY_T0000373;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4712259	4736418	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=CHM13_chrY_T0000373;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000373;transcript_name=CHM13_chrY_T0000373;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000373:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4736419	4736618	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=CHM13_chrY_T0000373;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000373;transcript_name=CHM13_chrY_T0000373;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000373:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4736419	4736618	.	+	1	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=CHM13_chrY_T0000373;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000373;transcript_name=CHM13_chrY_T0000373;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000373:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	4735618	4780972	100	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=CHM13_chrY_T0000375;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_G0000081;transcript_name=CHM13_chrY_T0000375;gene_name=PCDH11Y;ID=CHM13_chrY_T0000375;Name=PCDH11Y
CHM13_chrY	CAT	exon	4735618	4736989	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=CHM13_chrY_T0000375;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000375;transcript_name=CHM13_chrY_T0000375;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000375:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4736354	4736989	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=CHM13_chrY_T0000375;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000375;transcript_name=CHM13_chrY_T0000375;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000375:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	4736354	4736356	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=CHM13_chrY_T0000375;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000375;transcript_name=CHM13_chrY_T0000375;gene_name=PCDH11Y;ID=start_codon:CHM13_chrY_T0000375;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4736990	4777749	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=CHM13_chrY_T0000375;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000375;transcript_name=CHM13_chrY_T0000375;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000375:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4777750	4780972	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=CHM13_chrY_T0000375;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000375;transcript_name=CHM13_chrY_T0000375;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000375:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4777750	4780275	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=CHM13_chrY_T0000375;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000375;transcript_name=CHM13_chrY_T0000375;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000375:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	4780273	4780275	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=CHM13_chrY_T0000375;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000375;transcript_name=CHM13_chrY_T0000375;gene_name=PCDH11Y;ID=stop_codon:CHM13_chrY_T0000375;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	4735620	4784235	100	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=CHM13_chrY_T0000376;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_G0000081;transcript_name=CHM13_chrY_T0000376;gene_name=PCDH11Y;ID=CHM13_chrY_T0000376;Name=PCDH11Y
CHM13_chrY	CAT	exon	4735620	4736989	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=CHM13_chrY_T0000376;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000376;transcript_name=CHM13_chrY_T0000376;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000376:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4736354	4736989	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=CHM13_chrY_T0000376;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000376;transcript_name=CHM13_chrY_T0000376;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000376:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	4736354	4736356	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=CHM13_chrY_T0000376;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000376;transcript_name=CHM13_chrY_T0000376;gene_name=PCDH11Y;ID=start_codon:CHM13_chrY_T0000376;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4736990	4777749	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=CHM13_chrY_T0000376;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000376;transcript_name=CHM13_chrY_T0000376;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000376:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4777750	4780242	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=CHM13_chrY_T0000376;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000376;transcript_name=CHM13_chrY_T0000376;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000376:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4777750	4780242	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=CHM13_chrY_T0000376;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000376;transcript_name=CHM13_chrY_T0000376;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000376:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4780243	4783878	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=CHM13_chrY_T0000376;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000376;transcript_name=CHM13_chrY_T0000376;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000376:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4783879	4784235	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=CHM13_chrY_T0000376;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000376;transcript_name=CHM13_chrY_T0000376;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000376:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4783879	4783896	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=CHM13_chrY_T0000376;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000376;transcript_name=CHM13_chrY_T0000376;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000376:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	4783894	4783896	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=CHM13_chrY_T0000376;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000376;transcript_name=CHM13_chrY_T0000376;gene_name=PCDH11Y;ID=stop_codon:CHM13_chrY_T0000376;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	4735620	5422248	100	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_G0000081;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=CHM13_chrY_T0000377;Name=PCDH11Y
CHM13_chrY	CAT	exon	4735620	4736989	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000377:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4736354	4736989	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000377:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	4736354	4736356	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=start_codon:CHM13_chrY_T0000377;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4736990	4777749	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000377:0;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	4777750	4780242	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000377:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	4777750	4780242	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000377:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	4780243	5180622	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000377:1;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5180623	5180821	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000377:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	5180623	5180821	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000377:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5180822	5261782	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000377:2;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5261783	5261806	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000377:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	5261783	5261806	.	+	2	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000377:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5261807	5417295	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=intron:CHM13_chrY_T0000377:3;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5417296	5422248	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=exon:CHM13_chrY_T0000377:4;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	5417296	5417966	.	+	2	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=CDS:CHM13_chrY_T0000377:4;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	5417964	5417966	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=CHM13_chrY_T0000377;gene_id=CHM13_chrY_G0000081;Parent=CHM13_chrY_T0000377;transcript_name=CHM13_chrY_T0000377;gene_name=PCDH11Y;ID=stop_codon:CHM13_chrY_T0000377;Name=PCDH11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	4698593	4698783	.	+	.	source_gene_common_name=RNU2-57P;source_gene=ENSG00000252468.1;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;gene_id=CHM13_chrY_G0000082;gene_biotype=snRNA;gene_name=RNU2-57P;gene_sources=liftoff;ID=CHM13_chrY_G0000082;Name=RNU2-57P
CHM13_chrY	CAT	transcript	4698593	4698783	1000	+	.	source_transcript=ENST00000516659.1;source_transcript_name=RNU2-57P-201;source_gene=ENSG00000252468.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252468.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516659.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU2-57P;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;transcript_id=CHM13_chrY_T0000374;gene_id=CHM13_chrY_G0000082;Parent=CHM13_chrY_G0000082;transcript_name=CHM13_chrY_T0000374;gene_name=RNU2-57P;ID=CHM13_chrY_T0000374;Name=RNU2-57P
CHM13_chrY	CAT	exon	4698593	4698783	.	+	.	source_transcript=ENST00000516659.1;source_transcript_name=RNU2-57P-201;source_gene=ENSG00000252468.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252468.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516659.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU2-57P;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;transcript_id=CHM13_chrY_T0000374;gene_id=CHM13_chrY_G0000082;Parent=CHM13_chrY_T0000374;transcript_name=CHM13_chrY_T0000374;gene_name=RNU2-57P;ID=exon:CHM13_chrY_T0000374:0;Name=RNU2-57P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	4886758	4887612	.	-	.	source_gene_common_name=VDAC1P6;source_gene=ENSG00000231341.1;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;gene_id=CHM13_chrY_G0000083;gene_biotype=processed_pseudogene;gene_name=VDAC1P6;gene_sources=liftoff;ID=CHM13_chrY_G0000083;Name=VDAC1P6
CHM13_chrY	CAT	transcript	4886758	4887612	1000	-	.	source_transcript=ENST00000430062.1;source_transcript_name=VDAC1P6-201;source_gene=ENSG00000231341.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231341.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430062.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VDAC1P6;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;transcript_id=CHM13_chrY_T0000378;gene_id=CHM13_chrY_G0000083;Parent=CHM13_chrY_G0000083;transcript_name=CHM13_chrY_T0000378;gene_name=VDAC1P6;ID=CHM13_chrY_T0000378;Name=VDAC1P6
CHM13_chrY	CAT	exon	4886758	4887612	.	-	.	source_transcript=ENST00000430062.1;source_transcript_name=VDAC1P6-201;source_gene=ENSG00000231341.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231341.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430062.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VDAC1P6;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;transcript_id=CHM13_chrY_T0000378;gene_id=CHM13_chrY_G0000083;Parent=CHM13_chrY_T0000378;transcript_name=CHM13_chrY_T0000378;gene_name=VDAC1P6;ID=exon:CHM13_chrY_T0000378:0;Name=VDAC1P6;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5017296	5018515	.	-	.	source_gene_common_name=EIF4A1P2;source_gene=ENSG00000235001.3;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;gene_id=CHM13_chrY_G0000084;gene_biotype=processed_pseudogene;gene_name=EIF4A1P2;gene_sources=liftoff;ID=CHM13_chrY_G0000084;Name=EIF4A1P2
CHM13_chrY	CAT	transcript	5017296	5018515	1000	-	.	source_transcript=ENST00000422633.1;source_transcript_name=EIF4A1P2-201;source_gene=ENSG00000235001.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235001.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422633.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422633.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF4A1P2;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;transcript_id=CHM13_chrY_T0000379;gene_id=CHM13_chrY_G0000084;Parent=CHM13_chrY_G0000084;transcript_name=CHM13_chrY_T0000379;gene_name=EIF4A1P2;ID=CHM13_chrY_T0000379;Name=EIF4A1P2
CHM13_chrY	CAT	exon	5017296	5018515	.	-	.	source_transcript=ENST00000422633.1;source_transcript_name=EIF4A1P2-201;source_gene=ENSG00000235001.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235001.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422633.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422633.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF4A1P2;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;transcript_id=CHM13_chrY_T0000379;gene_id=CHM13_chrY_G0000084;Parent=CHM13_chrY_T0000379;transcript_name=CHM13_chrY_T0000379;gene_name=EIF4A1P2;ID=exon:CHM13_chrY_T0000379:0;Name=EIF4A1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5253153	5254439	.	+	.	source_gene_common_name=KRT18P10;source_gene=ENSG00000214207.2;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;gene_id=CHM13_chrY_G0000085;gene_biotype=processed_pseudogene;gene_name=KRT18P10;gene_sources=liftoff;ID=CHM13_chrY_G0000085;Name=KRT18P10
CHM13_chrY	CAT	transcript	5253153	5254439	1000	+	.	source_transcript=ENST00000388836.3;source_transcript_name=KRT18P10-201;source_gene=ENSG00000214207.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000214207.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000388836.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000388836.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P10;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;transcript_id=CHM13_chrY_T0000380;gene_id=CHM13_chrY_G0000085;Parent=CHM13_chrY_G0000085;transcript_name=CHM13_chrY_T0000380;gene_name=KRT18P10;ID=CHM13_chrY_T0000380;Name=KRT18P10
CHM13_chrY	CAT	exon	5253153	5254439	.	+	.	source_transcript=ENST00000388836.3;source_transcript_name=KRT18P10-201;source_gene=ENSG00000214207.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000214207.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000388836.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000388836.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P10;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;transcript_id=CHM13_chrY_T0000380;gene_id=CHM13_chrY_G0000085;Parent=CHM13_chrY_T0000380;transcript_name=CHM13_chrY_T0000380;gene_name=KRT18P10;ID=exon:CHM13_chrY_T0000380:0;Name=KRT18P10;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5314496	5314671	.	-	.	source_gene_common_name=SNX3P1Y;source_gene=ENSG00000278585.1;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;gene_id=CHM13_chrY_G0000086;gene_biotype=processed_pseudogene;gene_name=SNX3P1Y;gene_sources=liftoff;ID=CHM13_chrY_G0000086;Name=SNX3P1Y
CHM13_chrY	CAT	transcript	5314496	5314671	1000	-	.	source_transcript=ENST00000615757.1;source_transcript_name=SNX3P1Y-201;source_gene=ENSG00000278585.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278585.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615757.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX3P1Y;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;transcript_id=CHM13_chrY_T0000381;gene_id=CHM13_chrY_G0000086;Parent=CHM13_chrY_G0000086;transcript_name=CHM13_chrY_T0000381;gene_name=SNX3P1Y;ID=CHM13_chrY_T0000381;Name=SNX3P1Y
CHM13_chrY	CAT	exon	5314496	5314671	.	-	.	source_transcript=ENST00000615757.1;source_transcript_name=SNX3P1Y-201;source_gene=ENSG00000278585.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278585.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615757.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX3P1Y;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;transcript_id=CHM13_chrY_T0000381;gene_id=CHM13_chrY_G0000086;Parent=CHM13_chrY_T0000381;transcript_name=CHM13_chrY_T0000381;gene_name=SNX3P1Y;ID=exon:CHM13_chrY_T0000381:0;Name=SNX3P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5473322	5473759	.	-	.	source_gene_common_name=RPL26P37;source_gene=ENSG00000235175.1;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;gene_id=CHM13_chrY_G0000087;gene_biotype=processed_pseudogene;gene_name=RPL26P37;gene_sources=liftoff;ID=CHM13_chrY_G0000087;Name=RPL26P37
CHM13_chrY	CAT	transcript	5473322	5473759	1000	-	.	source_transcript=ENST00000411983.1;source_transcript_name=RPL26P37-201;source_gene=ENSG00000235175.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235175.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000411983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411983.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL26P37;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;transcript_id=CHM13_chrY_T0000382;gene_id=CHM13_chrY_G0000087;Parent=CHM13_chrY_G0000087;transcript_name=CHM13_chrY_T0000382;gene_name=RPL26P37;ID=CHM13_chrY_T0000382;Name=RPL26P37
CHM13_chrY	CAT	exon	5473322	5473759	.	-	.	source_transcript=ENST00000411983.1;source_transcript_name=RPL26P37-201;source_gene=ENSG00000235175.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235175.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000411983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411983.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL26P37;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;transcript_id=CHM13_chrY_T0000382;gene_id=CHM13_chrY_G0000087;Parent=CHM13_chrY_T0000382;transcript_name=CHM13_chrY_T0000382;gene_name=RPL26P37;ID=exon:CHM13_chrY_T0000382:0;Name=RPL26P37;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5567523	5568759	.	+	.	source_gene_common_name=TUSC2P1;source_gene=ENSG00000285470.1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;gene_id=CHM13_chrY_G0000088;gene_biotype=processed_pseudogene;gene_name=TUSC2P1;gene_sources=liftoff;ID=CHM13_chrY_G0000088;Name=TUSC2P1
CHM13_chrY	CAT	transcript	5567523	5568759	1000	+	.	source_transcript=ENST00000645906.1;source_transcript_name=TUSC2P1-201;source_gene=ENSG00000285470.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000285470.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000645906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645906.1;transcript_score=199.83800000000002;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUSC2P1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;transcript_id=CHM13_chrY_T0000383;gene_id=CHM13_chrY_G0000088;Parent=CHM13_chrY_G0000088;transcript_name=CHM13_chrY_T0000383;gene_name=TUSC2P1;ID=CHM13_chrY_T0000383;Name=TUSC2P1
CHM13_chrY	CAT	exon	5567523	5568759	.	+	.	source_transcript=ENST00000645906.1;source_transcript_name=TUSC2P1-201;source_gene=ENSG00000285470.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000285470.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000645906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645906.1;transcript_score=199.83800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUSC2P1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;transcript_id=CHM13_chrY_T0000383;gene_id=CHM13_chrY_G0000088;Parent=CHM13_chrY_T0000383;transcript_name=CHM13_chrY_T0000383;gene_name=TUSC2P1;ID=exon:CHM13_chrY_T0000383:0;Name=TUSC2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5838783	5839246	.	+	.	source_gene_common_name=DLGAP5P1;source_gene=ENSG00000237195.1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;gene_id=CHM13_chrY_G0000089;gene_biotype=processed_pseudogene;gene_name=DLGAP5P1;gene_sources=liftoff;ID=CHM13_chrY_G0000089;Name=DLGAP5P1
CHM13_chrY	CAT	transcript	5838783	5839246	1000	+	.	source_transcript=ENST00000430307.1;source_transcript_name=DLGAP5P1-201;source_gene=ENSG00000237195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430307.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DLGAP5P1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;transcript_id=CHM13_chrY_T0000384;gene_id=CHM13_chrY_G0000089;Parent=CHM13_chrY_G0000089;transcript_name=CHM13_chrY_T0000384;gene_name=DLGAP5P1;ID=CHM13_chrY_T0000384;Name=DLGAP5P1
CHM13_chrY	CAT	exon	5838783	5839246	.	+	.	source_transcript=ENST00000430307.1;source_transcript_name=DLGAP5P1-201;source_gene=ENSG00000237195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430307.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DLGAP5P1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;transcript_id=CHM13_chrY_T0000384;gene_id=CHM13_chrY_G0000089;Parent=CHM13_chrY_T0000384;transcript_name=CHM13_chrY_T0000384;gene_name=DLGAP5P1;ID=exon:CHM13_chrY_T0000384:0;Name=DLGAP5P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5921252	5926073	.	-	.	source_gene_common_name=TTTY23;source_gene=ENSG00000239225.2;gene_id=CHM13_chrY_G0000090;gene_biotype=lncRNA;gene_name=TTTY23;gene_sources=liftoff;ID=CHM13_chrY_G0000090;Name=TTTY23
CHM13_chrY	CAT	transcript	5921252	5926073	1000	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_G0000090;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=CHM13_chrY_T0000385;Name=TTTY23
CHM13_chrY	CAT	exon	5921252	5921847	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000385;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000385:0;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5921848	5922399	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000385;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000385:0;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5922400	5922507	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000385;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000385:1;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5922508	5922687	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000385;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000385:1;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5922688	5922740	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000385;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000385:2;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5922741	5923280	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000385;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000385:2;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5923281	5923426	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000385;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000385:3;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5923427	5923539	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000385;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000385:3;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5923540	5923629	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000385;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000385:4;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5923630	5923824	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000385;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000385:4;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5923825	5923947	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000385;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000385:5;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5923948	5925891	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000385;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000385:5;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5925892	5926073	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000385;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000385;transcript_name=CHM13_chrY_T0000385;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000385:6;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	5921429	5926055	1000	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000386;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_G0000090;transcript_name=CHM13_chrY_T0000386;gene_name=TTTY23;ID=CHM13_chrY_T0000386;Name=TTTY23
CHM13_chrY	CAT	exon	5921429	5921847	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000386;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000386;transcript_name=CHM13_chrY_T0000386;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000386:0;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5921848	5922399	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000386;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000386;transcript_name=CHM13_chrY_T0000386;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000386:0;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5922400	5922507	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000386;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000386;transcript_name=CHM13_chrY_T0000386;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000386:1;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5922508	5923280	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000386;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000386;transcript_name=CHM13_chrY_T0000386;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000386:1;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5923281	5923426	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000386;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000386;transcript_name=CHM13_chrY_T0000386;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000386:2;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5923427	5923539	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000386;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000386;transcript_name=CHM13_chrY_T0000386;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000386:2;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5923540	5923629	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000386;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000386;transcript_name=CHM13_chrY_T0000386;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000386:3;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5923630	5923824	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000386;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000386;transcript_name=CHM13_chrY_T0000386;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000386:3;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5923825	5923947	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000386;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000386;transcript_name=CHM13_chrY_T0000386;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000386:4;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5923948	5925891	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000386;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000386;transcript_name=CHM13_chrY_T0000386;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000386:4;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5925892	5926055	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000386;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000386;transcript_name=CHM13_chrY_T0000386;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000386:5;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	5921429	5926055	1000	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000387;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_G0000090;transcript_name=CHM13_chrY_T0000387;gene_name=TTTY23;ID=CHM13_chrY_T0000387;Name=TTTY23
CHM13_chrY	CAT	exon	5921429	5921847	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000387;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000387;transcript_name=CHM13_chrY_T0000387;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000387:0;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5921848	5922399	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000387;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000387;transcript_name=CHM13_chrY_T0000387;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000387:0;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5922400	5922507	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000387;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000387;transcript_name=CHM13_chrY_T0000387;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000387:1;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5922508	5923280	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000387;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000387;transcript_name=CHM13_chrY_T0000387;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000387:1;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5923281	5923426	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000387;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000387;transcript_name=CHM13_chrY_T0000387;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000387:2;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5923427	5923539	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000387;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000387;transcript_name=CHM13_chrY_T0000387;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000387:2;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5923540	5923629	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000387;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000387;transcript_name=CHM13_chrY_T0000387;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000387:3;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5923630	5925891	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000387;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000387;transcript_name=CHM13_chrY_T0000387;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000387:3;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5925892	5926055	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000387;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000387;transcript_name=CHM13_chrY_T0000387;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000387:4;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	5922432	5923596	1000	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000388;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_G0000090;transcript_name=CHM13_chrY_T0000388;gene_name=TTTY23;ID=CHM13_chrY_T0000388;Name=TTTY23
CHM13_chrY	CAT	exon	5922432	5922740	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000388;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000388;transcript_name=CHM13_chrY_T0000388;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000388:0;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5922741	5923280	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000388;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000388;transcript_name=CHM13_chrY_T0000388;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000388:0;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5923281	5923426	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000388;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000388;transcript_name=CHM13_chrY_T0000388;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000388:1;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5923427	5923539	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000388;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000388;transcript_name=CHM13_chrY_T0000388;gene_name=TTTY23;ID=intron:CHM13_chrY_T0000388:1;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5923540	5923596	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=CHM13_chrY_T0000388;gene_id=CHM13_chrY_G0000090;Parent=CHM13_chrY_T0000388;transcript_name=CHM13_chrY_T0000388;gene_name=TTTY23;ID=exon:CHM13_chrY_T0000388:2;Name=TTTY23;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5926255	5928799	.	+	.	source_gene_common_name=TSPY13P;source_gene=ENSG00000187657.6;gene_id=CHM13_chrY_G0000091;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY13P;gene_sources=liftoff;ID=CHM13_chrY_G0000091;Name=TSPY13P
CHM13_chrY	CAT	transcript	5926255	5928799	1000	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=CHM13_chrY_T0000389;gene_id=CHM13_chrY_G0000091;Parent=CHM13_chrY_G0000091;transcript_name=CHM13_chrY_T0000389;gene_name=TSPY13P;ID=CHM13_chrY_T0000389;Name=TSPY13P
CHM13_chrY	CAT	exon	5926255	5926731	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=CHM13_chrY_T0000389;gene_id=CHM13_chrY_G0000091;Parent=CHM13_chrY_T0000389;transcript_name=CHM13_chrY_T0000389;gene_name=TSPY13P;ID=exon:CHM13_chrY_T0000389:0;Name=TSPY13P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5926732	5927337	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=CHM13_chrY_T0000389;gene_id=CHM13_chrY_G0000091;Parent=CHM13_chrY_T0000389;transcript_name=CHM13_chrY_T0000389;gene_name=TSPY13P;ID=intron:CHM13_chrY_T0000389:0;Name=TSPY13P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927338	5927415	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=CHM13_chrY_T0000389;gene_id=CHM13_chrY_G0000091;Parent=CHM13_chrY_T0000389;transcript_name=CHM13_chrY_T0000389;gene_name=TSPY13P;ID=exon:CHM13_chrY_T0000389:1;Name=TSPY13P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927416	5927543	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=CHM13_chrY_T0000389;gene_id=CHM13_chrY_G0000091;Parent=CHM13_chrY_T0000389;transcript_name=CHM13_chrY_T0000389;gene_name=TSPY13P;ID=intron:CHM13_chrY_T0000389:1;Name=TSPY13P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927544	5927654	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=CHM13_chrY_T0000389;gene_id=CHM13_chrY_G0000091;Parent=CHM13_chrY_T0000389;transcript_name=CHM13_chrY_T0000389;gene_name=TSPY13P;ID=exon:CHM13_chrY_T0000389:2;Name=TSPY13P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927655	5927753	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=CHM13_chrY_T0000389;gene_id=CHM13_chrY_G0000091;Parent=CHM13_chrY_T0000389;transcript_name=CHM13_chrY_T0000389;gene_name=TSPY13P;ID=intron:CHM13_chrY_T0000389:2;Name=TSPY13P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927754	5927896	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=CHM13_chrY_T0000389;gene_id=CHM13_chrY_G0000091;Parent=CHM13_chrY_T0000389;transcript_name=CHM13_chrY_T0000389;gene_name=TSPY13P;ID=exon:CHM13_chrY_T0000389:3;Name=TSPY13P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927897	5928005	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=CHM13_chrY_T0000389;gene_id=CHM13_chrY_G0000091;Parent=CHM13_chrY_T0000389;transcript_name=CHM13_chrY_T0000389;gene_name=TSPY13P;ID=intron:CHM13_chrY_T0000389:3;Name=TSPY13P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928006	5928090	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=CHM13_chrY_T0000389;gene_id=CHM13_chrY_G0000091;Parent=CHM13_chrY_T0000389;transcript_name=CHM13_chrY_T0000389;gene_name=TSPY13P;ID=exon:CHM13_chrY_T0000389:4;Name=TSPY13P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5928091	5928779	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=CHM13_chrY_T0000389;gene_id=CHM13_chrY_G0000091;Parent=CHM13_chrY_T0000389;transcript_name=CHM13_chrY_T0000389;gene_name=TSPY13P;ID=intron:CHM13_chrY_T0000389:4;Name=TSPY13P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928780	5928799	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=CHM13_chrY_T0000389;gene_id=CHM13_chrY_G0000091;Parent=CHM13_chrY_T0000389;transcript_name=CHM13_chrY_T0000389;gene_name=TSPY13P;ID=exon:CHM13_chrY_T0000389:5;Name=TSPY13P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5926257	5935608	.	+	.	source_gene_common_name=ENSG00000309435;source_gene=ENSG00000309435.1;gene_id=CHM13_chrY_G0000092;gene_biotype=lncRNA;gene_name=ENSG00000309435;gene_sources=liftoff;ID=CHM13_chrY_G0000092;Name=ENSG00000309435
CHM13_chrY	CAT	transcript	5926257	5934885	1000	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_G0000092;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=CHM13_chrY_T0000390;Name=ENSG00000309435
CHM13_chrY	CAT	exon	5926257	5926341	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000390:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5926342	5926764	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000390:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5926765	5927007	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000390:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927008	5927355	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000390:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927356	5927415	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000390:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927416	5927543	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000390:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927544	5927654	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000390:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927655	5928003	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000390:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928004	5928126	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000390:4;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5928127	5928779	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000390:4;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928780	5928793	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000390:5;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5928794	5930215	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000390:5;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5930216	5930311	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000390:6;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5930312	5934269	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000390:6;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5934270	5934885	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=286.313;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000390;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000390;transcript_name=CHM13_chrY_T0000390;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000390:7;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	5926264	5935608	1000	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_G0000092;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=CHM13_chrY_T0000391;Name=ENSG00000309435
CHM13_chrY	CAT	exon	5926264	5926731	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000391;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000391:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5926732	5927337	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000391;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000391:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927338	5927415	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000391;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000391:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927416	5927543	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000391;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000391:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927544	5927654	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000391;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000391:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927655	5928003	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000391;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000391:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928004	5928126	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000391;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000391:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5928127	5928779	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000391;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000391:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928780	5928793	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000391;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000391:4;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5928794	5930215	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000391;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000391:4;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5930216	5930311	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000391;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000391:5;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5930312	5934269	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000391;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000391:5;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5934270	5935608	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=284.9962857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000391;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000391;transcript_name=CHM13_chrY_T0000391;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000391:6;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	5926264	5934885	1000	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000392;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_G0000092;transcript_name=CHM13_chrY_T0000392;gene_name=ENSG00000309435;ID=CHM13_chrY_T0000392;Name=ENSG00000309435
CHM13_chrY	CAT	exon	5926264	5926341	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000392;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000392;transcript_name=CHM13_chrY_T0000392;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000392:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5926342	5926764	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000392;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000392;transcript_name=CHM13_chrY_T0000392;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000392:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5926765	5927007	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000392;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000392;transcript_name=CHM13_chrY_T0000392;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000392:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927008	5927543	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000392;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000392;transcript_name=CHM13_chrY_T0000392;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000392:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927544	5927654	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000392;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000392;transcript_name=CHM13_chrY_T0000392;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000392:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927655	5934269	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000392;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000392;transcript_name=CHM13_chrY_T0000392;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000392:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5934270	5934885	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=273.473;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000392;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000392;transcript_name=CHM13_chrY_T0000392;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000392:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	5926266	5929332	1000	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000393;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_G0000092;transcript_name=CHM13_chrY_T0000393;gene_name=ENSG00000309435;ID=CHM13_chrY_T0000393;Name=ENSG00000309435
CHM13_chrY	CAT	exon	5926266	5926341	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000393;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000393;transcript_name=CHM13_chrY_T0000393;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000393:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5926342	5926764	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000393;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000393;transcript_name=CHM13_chrY_T0000393;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000393:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5926765	5927007	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000393;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000393;transcript_name=CHM13_chrY_T0000393;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000393:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927008	5927355	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000393;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000393;transcript_name=CHM13_chrY_T0000393;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000393:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927356	5927415	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000393;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000393;transcript_name=CHM13_chrY_T0000393;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000393:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927416	5927543	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000393;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000393;transcript_name=CHM13_chrY_T0000393;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000393:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927544	5927654	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000393;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000393;transcript_name=CHM13_chrY_T0000393;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000393:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927655	5928779	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000393;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000393;transcript_name=CHM13_chrY_T0000393;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000393:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928780	5929332	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000393;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000393;transcript_name=CHM13_chrY_T0000393;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000393:4;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	5926272	5934885	1000	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_G0000092;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=CHM13_chrY_T0000394;Name=ENSG00000309435
CHM13_chrY	CAT	exon	5926272	5926341	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000394:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5926342	5926764	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000394:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5926765	5927007	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000394:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927008	5927355	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000394:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927356	5927415	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000394:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927416	5927543	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000394:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927544	5927654	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000394:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927655	5928003	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000394:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928004	5928126	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000394:4;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5928127	5928779	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000394:4;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928780	5928793	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000394:5;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5928794	5930196	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000394:5;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5930197	5930450	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000394:6;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5930451	5934269	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000394:6;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5934270	5934885	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=286.293;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000394;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000394;transcript_name=CHM13_chrY_T0000394;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000394:7;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	5926281	5929331	1000	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000395;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_G0000092;transcript_name=CHM13_chrY_T0000395;gene_name=ENSG00000309435;ID=CHM13_chrY_T0000395;Name=ENSG00000309435
CHM13_chrY	CAT	exon	5926281	5926341	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000395;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000395;transcript_name=CHM13_chrY_T0000395;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000395:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5926342	5926764	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000395;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000395;transcript_name=CHM13_chrY_T0000395;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000395:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5926765	5927007	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000395;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000395;transcript_name=CHM13_chrY_T0000395;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000395:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927008	5927543	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000395;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000395;transcript_name=CHM13_chrY_T0000395;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000395:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927544	5927654	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000395;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000395;transcript_name=CHM13_chrY_T0000395;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000395:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927655	5928779	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000395;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000395;transcript_name=CHM13_chrY_T0000395;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000395:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928780	5929331	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000395;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000395;transcript_name=CHM13_chrY_T0000395;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000395:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	5926283	5934898	1000	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_G0000092;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=CHM13_chrY_T0000396;Name=ENSG00000309435
CHM13_chrY	CAT	exon	5926283	5926341	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000396:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5926342	5926764	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000396:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5926765	5927007	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000396:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927008	5927294	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000396:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927295	5927415	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000396:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927416	5927543	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000396:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927544	5927654	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000396:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927655	5928003	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000396:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928004	5928126	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000396:4;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5928127	5928779	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000396:4;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928780	5928793	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000396:5;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5928794	5930215	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000396:5;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5930216	5930311	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000396:6;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5930312	5934269	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000396:6;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5934270	5934898	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=286.354;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000396;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000396;transcript_name=CHM13_chrY_T0000396;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000396:7;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	5926283	5934885	1000	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_G0000092;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=CHM13_chrY_T0000397;Name=ENSG00000309435
CHM13_chrY	CAT	exon	5926283	5926341	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000397;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000397:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5926342	5926764	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000397;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000397:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5926765	5927007	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000397;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000397:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927008	5927543	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000397;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000397:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927544	5927654	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000397;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000397:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927655	5928003	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000397;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000397:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928004	5928126	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000397;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000397:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5928127	5928779	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000397;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000397:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928780	5928793	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000397;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000397:4;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5928794	5930215	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000397;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000397:4;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5930216	5930311	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000397;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000397:5;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5930312	5934269	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000397;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000397:5;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5934270	5934885	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=284.4472857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000397;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000397;transcript_name=CHM13_chrY_T0000397;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000397:6;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	5926290	5930767	1000	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_G0000092;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=CHM13_chrY_T0000398;Name=ENSG00000309435
CHM13_chrY	CAT	exon	5926290	5926341	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000398;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000398:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5926342	5926764	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000398;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000398:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5926765	5927007	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000398;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000398:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927008	5927355	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000398;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000398:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927356	5927415	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000398;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000398:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927416	5927543	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000398;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000398:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927544	5927654	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000398;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000398:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927655	5928003	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000398;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000398:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928004	5928126	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000398;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000398:4;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5928127	5928779	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000398;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000398:4;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5928780	5928793	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000398;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000398:5;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5928794	5930215	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000398;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000398:5;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5930216	5930767	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000398;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000398;transcript_name=CHM13_chrY_T0000398;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000398:6;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	5926304	5934885	1000	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000399;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_G0000092;transcript_name=CHM13_chrY_T0000399;gene_name=ENSG00000309435;ID=CHM13_chrY_T0000399;Name=ENSG00000309435
CHM13_chrY	CAT	exon	5926304	5926731	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000399;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000399;transcript_name=CHM13_chrY_T0000399;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000399:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5926732	5927337	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000399;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000399;transcript_name=CHM13_chrY_T0000399;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000399:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927338	5927415	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000399;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000399;transcript_name=CHM13_chrY_T0000399;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000399:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927416	5927543	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000399;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000399;transcript_name=CHM13_chrY_T0000399;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000399:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927544	5927654	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000399;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000399;transcript_name=CHM13_chrY_T0000399;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000399:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927655	5934269	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000399;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000399;transcript_name=CHM13_chrY_T0000399;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000399:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5934270	5934885	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=273.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000399;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000399;transcript_name=CHM13_chrY_T0000399;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000399:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	5926885	5934885	1000	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000400;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_G0000092;transcript_name=CHM13_chrY_T0000400;gene_name=ENSG00000309435;ID=CHM13_chrY_T0000400;Name=ENSG00000309435
CHM13_chrY	CAT	exon	5926885	5927007	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000400;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000400;transcript_name=CHM13_chrY_T0000400;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000400:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927008	5927355	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000400;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000400;transcript_name=CHM13_chrY_T0000400;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000400:0;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927356	5927415	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000400;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000400;transcript_name=CHM13_chrY_T0000400;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000400:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927416	5927543	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000400;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000400;transcript_name=CHM13_chrY_T0000400;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000400:1;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5927544	5927654	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000400;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000400;transcript_name=CHM13_chrY_T0000400;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000400:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5927655	5934269	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000400;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000400;transcript_name=CHM13_chrY_T0000400;gene_name=ENSG00000309435;ID=intron:CHM13_chrY_T0000400:2;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5934270	5934885	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=299.121;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=CHM13_chrY_T0000400;gene_id=CHM13_chrY_G0000092;Parent=CHM13_chrY_T0000400;transcript_name=CHM13_chrY_T0000400;gene_name=ENSG00000309435;ID=exon:CHM13_chrY_T0000400:3;Name=ENSG00000309435;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5933249	5933735	.	-	.	source_gene_common_name=ENSG00000275352;source_gene=ENSG00000275352.1;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;gene_id=CHM13_chrY_G0000093;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000275352;gene_sources=liftoff;ID=CHM13_chrY_G0000093;Name=ENSG00000275352
CHM13_chrY	CAT	transcript	5933249	5933735	1000	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=CHM13_chrY_T0000401;gene_id=CHM13_chrY_G0000093;Parent=CHM13_chrY_G0000093;transcript_name=CHM13_chrY_T0000401;gene_name=ENSG00000275352;ID=CHM13_chrY_T0000401;Name=ENSG00000275352
CHM13_chrY	CAT	exon	5933249	5933331	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=CHM13_chrY_T0000401;gene_id=CHM13_chrY_G0000093;Parent=CHM13_chrY_T0000401;transcript_name=CHM13_chrY_T0000401;gene_name=ENSG00000275352;ID=exon:CHM13_chrY_T0000401:0;Name=ENSG00000275352;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5933332	5933437	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=CHM13_chrY_T0000401;gene_id=CHM13_chrY_G0000093;Parent=CHM13_chrY_T0000401;transcript_name=CHM13_chrY_T0000401;gene_name=ENSG00000275352;ID=intron:CHM13_chrY_T0000401:0;Name=ENSG00000275352;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5933438	5933582	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=CHM13_chrY_T0000401;gene_id=CHM13_chrY_G0000093;Parent=CHM13_chrY_T0000401;transcript_name=CHM13_chrY_T0000401;gene_name=ENSG00000275352;ID=exon:CHM13_chrY_T0000401:1;Name=ENSG00000275352;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5933583	5933671	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=CHM13_chrY_T0000401;gene_id=CHM13_chrY_G0000093;Parent=CHM13_chrY_T0000401;transcript_name=CHM13_chrY_T0000401;gene_name=ENSG00000275352;ID=intron:CHM13_chrY_T0000401:1;Name=ENSG00000275352;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5933672	5933735	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=CHM13_chrY_T0000401;gene_id=CHM13_chrY_G0000093;Parent=CHM13_chrY_T0000401;transcript_name=CHM13_chrY_T0000401;gene_name=ENSG00000275352;ID=exon:CHM13_chrY_T0000401:2;Name=ENSG00000275352;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5962007	5963124	.	-	.	source_gene_common_name=TSPY18P;source_gene=ENSG00000231874.3;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;gene_id=CHM13_chrY_G0000094;gene_biotype=unprocessed_pseudogene;gene_name=TSPY18P;gene_sources=liftoff;ID=CHM13_chrY_G0000094;Name=TSPY18P
CHM13_chrY	CAT	transcript	5962007	5963124	1000	-	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=CHM13_chrY_T0000402;gene_id=CHM13_chrY_G0000094;Parent=CHM13_chrY_G0000094;transcript_name=CHM13_chrY_T0000402;gene_name=TSPY18P;ID=CHM13_chrY_T0000402;Name=TSPY18P
CHM13_chrY	CAT	exon	5962007	5962039	.	-	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=CHM13_chrY_T0000402;gene_id=CHM13_chrY_G0000094;Parent=CHM13_chrY_T0000402;transcript_name=CHM13_chrY_T0000402;gene_name=TSPY18P;ID=exon:CHM13_chrY_T0000402:0;Name=TSPY18P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5962040	5962648	.	-	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=CHM13_chrY_T0000402;gene_id=CHM13_chrY_G0000094;Parent=CHM13_chrY_T0000402;transcript_name=CHM13_chrY_T0000402;gene_name=TSPY18P;ID=intron:CHM13_chrY_T0000402:0;Name=TSPY18P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5962649	5963124	.	-	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;alternative_source_transcripts=ENST00000418461.1,ENST00000418461.1;transcript_id=CHM13_chrY_T0000402;gene_id=CHM13_chrY_G0000094;Parent=CHM13_chrY_T0000402;transcript_name=CHM13_chrY_T0000402;gene_name=TSPY18P;ID=exon:CHM13_chrY_T0000402:1;Name=TSPY18P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5964086	5964326	.	+	.	source_gene_common_name=ENSG00000274445;source_gene=ENSG00000274445.1;gene_id=CHM13_chrY_G0000095;gene_biotype=processed_pseudogene;gene_name=ENSG00000274445;gene_sources=liftoff;ID=CHM13_chrY_G0000095;Name=ENSG00000274445
CHM13_chrY	CAT	transcript	5964086	5964326	1000	+	.	source_transcript=ENST00000612764.1;source_transcript_name=ENST00000612764;source_gene=ENSG00000274445.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274445.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000612764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612764.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274445;transcript_id=CHM13_chrY_T0000403;gene_id=CHM13_chrY_G0000095;Parent=CHM13_chrY_G0000095;transcript_name=CHM13_chrY_T0000403;gene_name=ENSG00000274445;ID=CHM13_chrY_T0000403;Name=ENSG00000274445
CHM13_chrY	CAT	exon	5964086	5964326	.	+	.	source_transcript=ENST00000612764.1;source_transcript_name=ENST00000612764;source_gene=ENSG00000274445.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274445.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000612764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612764.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274445;transcript_id=CHM13_chrY_T0000403;gene_id=CHM13_chrY_G0000095;Parent=CHM13_chrY_T0000403;transcript_name=CHM13_chrY_T0000403;gene_name=ENSG00000274445;ID=exon:CHM13_chrY_T0000403:0;Name=ENSG00000274445;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5974241	6001710	.	+	.	source_gene_common_name=ENSG00000310196;source_gene=ENSG00000310196.1;gene_id=CHM13_chrY_G0000096;gene_biotype=lncRNA;gene_name=ENSG00000310196;gene_sources=liftoff;ID=CHM13_chrY_G0000096;Name=ENSG00000310196
CHM13_chrY	CAT	transcript	5974241	6001710	1000	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=CHM13_chrY_T0000404;gene_id=CHM13_chrY_G0000096;Parent=CHM13_chrY_G0000096;transcript_name=CHM13_chrY_T0000404;gene_name=ENSG00000310196;ID=CHM13_chrY_T0000404;Name=ENSG00000310196
CHM13_chrY	CAT	exon	5974241	5974719	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=CHM13_chrY_T0000404;gene_id=CHM13_chrY_G0000096;Parent=CHM13_chrY_T0000404;transcript_name=CHM13_chrY_T0000404;gene_name=ENSG00000310196;ID=exon:CHM13_chrY_T0000404:0;Name=ENSG00000310196;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5974720	5996791	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=CHM13_chrY_T0000404;gene_id=CHM13_chrY_G0000096;Parent=CHM13_chrY_T0000404;transcript_name=CHM13_chrY_T0000404;gene_name=ENSG00000310196;ID=intron:CHM13_chrY_T0000404:0;Name=ENSG00000310196;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5996792	5996941	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=CHM13_chrY_T0000404;gene_id=CHM13_chrY_G0000096;Parent=CHM13_chrY_T0000404;transcript_name=CHM13_chrY_T0000404;gene_name=ENSG00000310196;ID=exon:CHM13_chrY_T0000404:1;Name=ENSG00000310196;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5996942	6000577	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=CHM13_chrY_T0000404;gene_id=CHM13_chrY_G0000096;Parent=CHM13_chrY_T0000404;transcript_name=CHM13_chrY_T0000404;gene_name=ENSG00000310196;ID=intron:CHM13_chrY_T0000404:1;Name=ENSG00000310196;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6000578	6000659	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=CHM13_chrY_T0000404;gene_id=CHM13_chrY_G0000096;Parent=CHM13_chrY_T0000404;transcript_name=CHM13_chrY_T0000404;gene_name=ENSG00000310196;ID=exon:CHM13_chrY_T0000404:2;Name=ENSG00000310196;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6000660	6001068	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=CHM13_chrY_T0000404;gene_id=CHM13_chrY_G0000096;Parent=CHM13_chrY_T0000404;transcript_name=CHM13_chrY_T0000404;gene_name=ENSG00000310196;ID=intron:CHM13_chrY_T0000404:2;Name=ENSG00000310196;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6001069	6001710	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;transcript_id=CHM13_chrY_T0000404;gene_id=CHM13_chrY_G0000096;Parent=CHM13_chrY_T0000404;transcript_name=CHM13_chrY_T0000404;gene_name=ENSG00000310196;ID=exon:CHM13_chrY_T0000404:3;Name=ENSG00000310196;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5986092	6001370	.	+	.	source_gene_common_name=RBMY2NP;source_gene=ENSG00000229208.1;gene_id=CHM13_chrY_G0000097;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2NP;gene_sources=liftoff;ID=CHM13_chrY_G0000097;Name=RBMY2NP
CHM13_chrY	CAT	transcript	5986092	6001370	1000	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_G0000097;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=CHM13_chrY_T0000405;Name=RBMY2NP
CHM13_chrY	CAT	exon	5986092	5986269	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_T0000405;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=exon:CHM13_chrY_T0000405:0;Name=RBMY2NP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5986270	5996791	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_T0000405;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=intron:CHM13_chrY_T0000405:0;Name=RBMY2NP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5996792	5996941	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_T0000405;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=exon:CHM13_chrY_T0000405:1;Name=RBMY2NP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5996942	5998941	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_T0000405;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=intron:CHM13_chrY_T0000405:1;Name=RBMY2NP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5998942	5999041	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_T0000405;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=exon:CHM13_chrY_T0000405:2;Name=RBMY2NP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5999042	5999848	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_T0000405;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=intron:CHM13_chrY_T0000405:2;Name=RBMY2NP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	5999849	5999959	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_T0000405;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=exon:CHM13_chrY_T0000405:3;Name=RBMY2NP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5999960	6000356	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_T0000405;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=intron:CHM13_chrY_T0000405:3;Name=RBMY2NP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6000357	6000467	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_T0000405;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=exon:CHM13_chrY_T0000405:4;Name=RBMY2NP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6000468	6000577	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_T0000405;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=intron:CHM13_chrY_T0000405:4;Name=RBMY2NP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6000578	6000653	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_T0000405;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=exon:CHM13_chrY_T0000405:5;Name=RBMY2NP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6000654	6001068	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_T0000405;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=intron:CHM13_chrY_T0000405:5;Name=RBMY2NP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6001069	6001370	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=CHM13_chrY_T0000405;gene_id=CHM13_chrY_G0000097;Parent=CHM13_chrY_T0000405;transcript_name=CHM13_chrY_T0000405;gene_name=RBMY2NP;ID=exon:CHM13_chrY_T0000405:6;Name=RBMY2NP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	5998893	6048427	.	-	.	source_gene_common_name=TTTY22;source_gene=ENSG00000224075.2;gene_id=CHM13_chrY_G0000098;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=liftoff;ID=CHM13_chrY_G0000098;Name=TTTY22
CHM13_chrY	CAT	transcript	5998893	6048427	1000	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_G0000098;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=CHM13_chrY_T0000406;Name=TTTY22
CHM13_chrY	CAT	exon	5998893	5999031	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000406:0;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	5999032	6001181	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000406:0;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6001182	6001354	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000406:1;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6001355	6005628	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000406:1;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6005629	6005797	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000406:2;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6005798	6019398	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000406:2;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6019399	6019513	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000406:3;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6019514	6022689	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000406:3;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6022690	6022728	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000406:4;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6022729	6023413	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000406:4;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6023414	6023488	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000406:5;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6023489	6027913	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000406:5;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6027914	6028025	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000406:6;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6028026	6034587	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000406:6;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6034588	6034840	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000406:7;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6034841	6037381	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000406:7;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6037382	6037454	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000406:8;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6037455	6037830	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000406:8;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6037831	6037911	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000406:9;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6037912	6045347	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000406:9;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6045348	6045503	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000406:10;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6045504	6048221	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000406:10;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6048222	6048427	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000406;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000406;transcript_name=CHM13_chrY_T0000406;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000406:11;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6019554	6031648	1000	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000408;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_G0000098;transcript_name=CHM13_chrY_T0000408;gene_name=TTTY22;ID=CHM13_chrY_T0000408;Name=TTTY22
CHM13_chrY	CAT	exon	6019554	6019599	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000408;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000408;transcript_name=CHM13_chrY_T0000408;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000408:0;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6019600	6022689	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000408;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000408;transcript_name=CHM13_chrY_T0000408;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000408:0;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6022690	6022728	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000408;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000408;transcript_name=CHM13_chrY_T0000408;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000408:1;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6022729	6023413	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000408;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000408;transcript_name=CHM13_chrY_T0000408;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000408:1;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6023414	6023488	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000408;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000408;transcript_name=CHM13_chrY_T0000408;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000408:2;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6023489	6027913	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000408;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000408;transcript_name=CHM13_chrY_T0000408;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000408:2;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6027914	6028025	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000408;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000408;transcript_name=CHM13_chrY_T0000408;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000408:3;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6028026	6031493	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000408;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000408;transcript_name=CHM13_chrY_T0000408;gene_name=TTTY22;ID=intron:CHM13_chrY_T0000408:3;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6031494	6031648	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=CHM13_chrY_T0000408;gene_id=CHM13_chrY_G0000098;Parent=CHM13_chrY_T0000408;transcript_name=CHM13_chrY_T0000408;gene_name=TTTY22;ID=exon:CHM13_chrY_T0000408:4;Name=TTTY22;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6015278	6019484	.	-	.	source_gene_common_name=ENSG00000228379;source_gene=ENSG00000228379.1;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;gene_id=CHM13_chrY_G0000099;gene_biotype=lncRNA;gene_name=ENSG00000228379;gene_sources=liftoff;ID=CHM13_chrY_G0000099;Name=ENSG00000228379
CHM13_chrY	CAT	transcript	6015278	6019484	1000	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=CHM13_chrY_T0000407;gene_id=CHM13_chrY_G0000099;Parent=CHM13_chrY_G0000099;transcript_name=CHM13_chrY_T0000407;gene_name=ENSG00000228379;ID=CHM13_chrY_T0000407;Name=ENSG00000228379
CHM13_chrY	CAT	exon	6015278	6015496	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=CHM13_chrY_T0000407;gene_id=CHM13_chrY_G0000099;Parent=CHM13_chrY_T0000407;transcript_name=CHM13_chrY_T0000407;gene_name=ENSG00000228379;ID=exon:CHM13_chrY_T0000407:0;Name=ENSG00000228379;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6015497	6016754	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=CHM13_chrY_T0000407;gene_id=CHM13_chrY_G0000099;Parent=CHM13_chrY_T0000407;transcript_name=CHM13_chrY_T0000407;gene_name=ENSG00000228379;ID=intron:CHM13_chrY_T0000407:0;Name=ENSG00000228379;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6016755	6016897	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=CHM13_chrY_T0000407;gene_id=CHM13_chrY_G0000099;Parent=CHM13_chrY_T0000407;transcript_name=CHM13_chrY_T0000407;gene_name=ENSG00000228379;ID=exon:CHM13_chrY_T0000407:1;Name=ENSG00000228379;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6016898	6019398	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=CHM13_chrY_T0000407;gene_id=CHM13_chrY_G0000099;Parent=CHM13_chrY_T0000407;transcript_name=CHM13_chrY_T0000407;gene_name=ENSG00000228379;ID=intron:CHM13_chrY_T0000407:1;Name=ENSG00000228379;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6019399	6019484	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=CHM13_chrY_T0000407;gene_id=CHM13_chrY_G0000099;Parent=CHM13_chrY_T0000407;transcript_name=CHM13_chrY_T0000407;gene_name=ENSG00000228379;ID=exon:CHM13_chrY_T0000407:2;Name=ENSG00000228379;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6058470	6079643	.	+	.	source_gene_common_name=TTTY1;source_gene=ENSG00000129845.6;gene_id=CHM13_chrY_G0000100;gene_biotype=lncRNA;gene_name=TTTY1;gene_sources=liftoff;ID=CHM13_chrY_G0000100;Name=TTTY1
CHM13_chrY	CAT	transcript	6058470	6073647	1000	+	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=CHM13_chrY_T0000409;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_G0000100;transcript_name=CHM13_chrY_T0000409;gene_name=TTTY1;ID=CHM13_chrY_T0000409;Name=TTTY1
CHM13_chrY	CAT	exon	6058470	6058754	.	+	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=CHM13_chrY_T0000409;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000409;transcript_name=CHM13_chrY_T0000409;gene_name=TTTY1;ID=exon:CHM13_chrY_T0000409:0;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6058755	6069201	.	+	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=CHM13_chrY_T0000409;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000409;transcript_name=CHM13_chrY_T0000409;gene_name=TTTY1;ID=intron:CHM13_chrY_T0000409:0;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6069202	6069360	.	+	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=CHM13_chrY_T0000409;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000409;transcript_name=CHM13_chrY_T0000409;gene_name=TTTY1;ID=exon:CHM13_chrY_T0000409:1;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6069361	6073485	.	+	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=CHM13_chrY_T0000409;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000409;transcript_name=CHM13_chrY_T0000409;gene_name=TTTY1;ID=intron:CHM13_chrY_T0000409:1;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6073486	6073647	.	+	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=CHM13_chrY_T0000409;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000409;transcript_name=CHM13_chrY_T0000409;gene_name=TTTY1;ID=exon:CHM13_chrY_T0000409:2;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6058510	6079643	1000	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=CHM13_chrY_T0000410;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_G0000100;transcript_name=CHM13_chrY_T0000410;gene_name=TTTY1;ID=CHM13_chrY_T0000410;Name=TTTY1
CHM13_chrY	CAT	exon	6058510	6058754	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=CHM13_chrY_T0000410;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000410;transcript_name=CHM13_chrY_T0000410;gene_name=TTTY1;ID=exon:CHM13_chrY_T0000410:0;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6058755	6062178	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=CHM13_chrY_T0000410;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000410;transcript_name=CHM13_chrY_T0000410;gene_name=TTTY1;ID=intron:CHM13_chrY_T0000410:0;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6062179	6062338	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=CHM13_chrY_T0000410;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000410;transcript_name=CHM13_chrY_T0000410;gene_name=TTTY1;ID=exon:CHM13_chrY_T0000410:1;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6062339	6069201	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=CHM13_chrY_T0000410;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000410;transcript_name=CHM13_chrY_T0000410;gene_name=TTTY1;ID=intron:CHM13_chrY_T0000410:1;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6069202	6069310	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=CHM13_chrY_T0000410;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000410;transcript_name=CHM13_chrY_T0000410;gene_name=TTTY1;ID=exon:CHM13_chrY_T0000410:2;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6069311	6071666	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=CHM13_chrY_T0000410;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000410;transcript_name=CHM13_chrY_T0000410;gene_name=TTTY1;ID=intron:CHM13_chrY_T0000410:2;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6071667	6071804	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=CHM13_chrY_T0000410;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000410;transcript_name=CHM13_chrY_T0000410;gene_name=TTTY1;ID=exon:CHM13_chrY_T0000410:3;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6071805	6079385	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=CHM13_chrY_T0000410;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000410;transcript_name=CHM13_chrY_T0000410;gene_name=TTTY1;ID=intron:CHM13_chrY_T0000410:3;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079386	6079643	.	+	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5,ENST00000250776.5;transcript_id=CHM13_chrY_T0000410;gene_id=CHM13_chrY_G0000100;Parent=CHM13_chrY_T0000410;transcript_name=CHM13_chrY_T0000410;gene_name=TTTY1;ID=exon:CHM13_chrY_T0000410:4;Name=TTTY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6074138	6130171	.	-	.	source_gene_common_name=TTTY2B;source_gene=ENSG00000212856.7;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;gene_id=CHM13_chrY_G0000101;gene_biotype=lncRNA;gene_name=TTTY2B;gene_sources=liftoff;ID=CHM13_chrY_G0000101;Name=TTTY2B
CHM13_chrY	CAT	transcript	6074138	6113726	1000	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=CHM13_chrY_T0000411;Name=TTTY2B
CHM13_chrY	CAT	exon	6074138	6075002	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000411:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6075003	6076225	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000411:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076226	6076423	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000411:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076424	6079452	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000411:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079453	6079609	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000411:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080222	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000411:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080223	6080450	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000411:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6087844	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000411:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6087845	6087931	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000411:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6087932	6088282	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000411:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6088283	6088387	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000411:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6088388	6090407	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000411:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6090408	6090485	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000411:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6090486	6097010	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000411:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6097011	6097221	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000411:7;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6097222	6097395	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000411:7;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6097396	6097483	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000411:8;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6097484	6113525	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000411:8;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6113526	6113726	.	-	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1,ENST00000735423.1;transcript_id=CHM13_chrY_T0000411;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000411;transcript_name=CHM13_chrY_T0000411;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000411:9;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6074138	6096531	1000	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=CHM13_chrY_T0000412;Name=TTTY2B
CHM13_chrY	CAT	exon	6074138	6075002	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000412:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6075003	6076225	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000412:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076226	6076423	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000412:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076424	6079452	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000412:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079453	6079609	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000412:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080301	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000412:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080302	6080450	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000412:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6087844	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000412:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6087845	6087931	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000412:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6087932	6088282	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000412:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6088283	6088387	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000412:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6088388	6090407	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000412:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6090408	6090485	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000412:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6090486	6096319	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000412:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6096320	6096531	.	-	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1,ENST00000735425.1;transcript_id=CHM13_chrY_T0000412;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000412;transcript_name=CHM13_chrY_T0000412;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000412:7;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6074138	6096530	1000	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=CHM13_chrY_T0000413;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000413;gene_name=TTTY2B;ID=CHM13_chrY_T0000413;Name=TTTY2B
CHM13_chrY	CAT	exon	6074138	6075002	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=CHM13_chrY_T0000413;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000413;transcript_name=CHM13_chrY_T0000413;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000413:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6075003	6076225	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=CHM13_chrY_T0000413;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000413;transcript_name=CHM13_chrY_T0000413;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000413:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076226	6076423	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=CHM13_chrY_T0000413;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000413;transcript_name=CHM13_chrY_T0000413;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000413:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076424	6079452	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=CHM13_chrY_T0000413;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000413;transcript_name=CHM13_chrY_T0000413;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000413:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079453	6079609	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=CHM13_chrY_T0000413;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000413;transcript_name=CHM13_chrY_T0000413;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000413:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080301	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=CHM13_chrY_T0000413;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000413;transcript_name=CHM13_chrY_T0000413;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000413:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080302	6080450	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=CHM13_chrY_T0000413;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000413;transcript_name=CHM13_chrY_T0000413;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000413:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6090407	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=CHM13_chrY_T0000413;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000413;transcript_name=CHM13_chrY_T0000413;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000413:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6090408	6090485	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=CHM13_chrY_T0000413;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000413;transcript_name=CHM13_chrY_T0000413;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000413:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6090486	6096319	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=CHM13_chrY_T0000413;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000413;transcript_name=CHM13_chrY_T0000413;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000413:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6096320	6096530	.	-	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1,ENST00000735426.1;transcript_id=CHM13_chrY_T0000413;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000413;transcript_name=CHM13_chrY_T0000413;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000413:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6074138	6096530	1000	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=CHM13_chrY_T0000414;Name=TTTY2B
CHM13_chrY	CAT	exon	6074138	6075002	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000414:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6075003	6076225	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000414:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076226	6076423	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000414:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076424	6076543	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000414:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076544	6076622	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000414:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076623	6078255	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000414:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6078256	6078473	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000414:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6078474	6078836	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000414:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6078837	6078931	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000414:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6078932	6079452	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000414:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079453	6079609	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000414:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080222	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000414:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080223	6080450	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000414:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6090407	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000414:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6090408	6090485	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000414:7;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6090486	6096325	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000414:7;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6096326	6096530	.	-	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1,ENST00000735427.1;transcript_id=CHM13_chrY_T0000414;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000414;transcript_name=CHM13_chrY_T0000414;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000414:8;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6074138	6096518	1000	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=CHM13_chrY_T0000415;Name=TTTY2B
CHM13_chrY	CAT	exon	6074138	6075002	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000415:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6075003	6076225	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000415:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076226	6076423	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000415:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076424	6076543	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000415:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076544	6076622	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000415:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076623	6079452	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000415:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079453	6079609	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000415:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080301	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000415:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080302	6080450	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000415:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6087844	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000415:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6087845	6087931	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000415:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6087932	6090407	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000415:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6090408	6090485	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000415:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6090486	6096319	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000415:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6096320	6096518	.	-	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1,ENST00000735428.1;transcript_id=CHM13_chrY_T0000415;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000415;transcript_name=CHM13_chrY_T0000415;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000415:7;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6074138	6082699	1000	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=CHM13_chrY_T0000416;Name=TTTY2B
CHM13_chrY	CAT	exon	6074138	6075002	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000416:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6075003	6076225	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000416:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076226	6076423	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000416:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076424	6076543	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000416:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076544	6076622	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000416:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076623	6078255	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000416:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6078256	6078473	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000416:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6078474	6079452	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000416:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079453	6079609	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000416:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080301	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000416:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080302	6080450	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000416:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6080742	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000416:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080743	6080829	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000416:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080830	6082562	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000416:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6082563	6082699	.	-	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=CHM13_chrY_T0000416;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000416;transcript_name=CHM13_chrY_T0000416;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000416:7;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6074323	6092225	1000	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=CHM13_chrY_T0000417;Name=TTTY2B
CHM13_chrY	CAT	exon	6074323	6075002	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000417;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000417:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6075003	6076225	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000417;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000417:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076226	6076423	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000417;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000417:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076424	6076543	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000417;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000417:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076544	6076622	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000417;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000417:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076623	6079452	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000417;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000417:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079453	6079609	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000417;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000417:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080301	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000417;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000417:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080302	6080450	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000417;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000417:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6087844	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000417;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000417:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6087845	6087931	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000417;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000417:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6087932	6090407	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000417;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000417:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6090408	6092225	.	-	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=CHM13_chrY_T0000417;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000417;transcript_name=CHM13_chrY_T0000417;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000417:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6074323	6113742	1000	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=CHM13_chrY_T0000418;Name=TTTY2B
CHM13_chrY	CAT	exon	6074323	6075002	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000418:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6075003	6076225	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000418:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076226	6076423	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000418:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076424	6076543	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000418:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076544	6076622	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000418:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076623	6079452	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000418:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079453	6079609	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000418:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080301	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000418:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080302	6080450	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000418:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6090407	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000418:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6090408	6090485	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000418:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6090486	6097010	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000418:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6097011	6097221	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000418:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6097222	6113525	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000418:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6113526	6113742	.	-	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1,ENST00000735424.1;transcript_id=CHM13_chrY_T0000418;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000418;transcript_name=CHM13_chrY_T0000418;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000418:7;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6074323	6082704	1000	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=CHM13_chrY_T0000419;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000419;gene_name=TTTY2B;ID=CHM13_chrY_T0000419;Name=TTTY2B
CHM13_chrY	CAT	exon	6074323	6075002	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=CHM13_chrY_T0000419;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000419;transcript_name=CHM13_chrY_T0000419;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000419:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6075003	6076225	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=CHM13_chrY_T0000419;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000419;transcript_name=CHM13_chrY_T0000419;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000419:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076226	6076423	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=CHM13_chrY_T0000419;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000419;transcript_name=CHM13_chrY_T0000419;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000419:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076424	6079452	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=CHM13_chrY_T0000419;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000419;transcript_name=CHM13_chrY_T0000419;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000419:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079453	6079609	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=CHM13_chrY_T0000419;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000419;transcript_name=CHM13_chrY_T0000419;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000419:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080301	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=CHM13_chrY_T0000419;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000419;transcript_name=CHM13_chrY_T0000419;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000419:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080302	6080450	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=CHM13_chrY_T0000419;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000419;transcript_name=CHM13_chrY_T0000419;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000419:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6080742	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=CHM13_chrY_T0000419;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000419;transcript_name=CHM13_chrY_T0000419;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000419:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080743	6080829	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=CHM13_chrY_T0000419;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000419;transcript_name=CHM13_chrY_T0000419;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000419:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080830	6082568	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=CHM13_chrY_T0000419;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000419;transcript_name=CHM13_chrY_T0000419;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000419:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6082569	6082704	.	-	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=CHM13_chrY_T0000419;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000419;transcript_name=CHM13_chrY_T0000419;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000419:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6074326	6130171	1000	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=CHM13_chrY_T0000420;Name=TTTY2B
CHM13_chrY	CAT	exon	6074326	6075002	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000420:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6075003	6076225	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000420:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076226	6076423	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000420:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076424	6079452	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000420:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079453	6079609	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000420:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080301	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000420:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080302	6080450	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000420:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6090407	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000420:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6090408	6090485	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000420:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6090486	6097010	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000420:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6097011	6097221	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000420:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6097222	6097395	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000420:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6097396	6097483	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000420:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6097484	6113525	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000420:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6113526	6114432	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000420:7;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6114433	6117416	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000420:7;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6117417	6117637	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000420:8;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6117638	6118572	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000420:8;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118573	6118740	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000420:9;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6118741	6119899	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000420:9;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6119900	6120081	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000420:10;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6120082	6124027	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000420:10;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6124028	6124166	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000420:11;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6124167	6129404	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000420:11;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6129405	6130171	.	-	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2,ENST00000651733.2;transcript_id=CHM13_chrY_T0000420;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000420;transcript_name=CHM13_chrY_T0000420;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000420:12;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6074327	6096518	1000	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=CHM13_chrY_T0000421;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000421;gene_name=TTTY2B;ID=CHM13_chrY_T0000421;Name=TTTY2B
CHM13_chrY	CAT	exon	6074327	6075002	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=CHM13_chrY_T0000421;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000421;transcript_name=CHM13_chrY_T0000421;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000421:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6075003	6076225	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=CHM13_chrY_T0000421;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000421;transcript_name=CHM13_chrY_T0000421;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000421:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076226	6076423	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=CHM13_chrY_T0000421;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000421;transcript_name=CHM13_chrY_T0000421;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000421:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076424	6079452	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=CHM13_chrY_T0000421;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000421;transcript_name=CHM13_chrY_T0000421;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000421:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079453	6079609	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=CHM13_chrY_T0000421;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000421;transcript_name=CHM13_chrY_T0000421;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000421:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080222	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=CHM13_chrY_T0000421;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000421;transcript_name=CHM13_chrY_T0000421;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000421:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080223	6080450	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=CHM13_chrY_T0000421;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000421;transcript_name=CHM13_chrY_T0000421;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000421:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6090407	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=CHM13_chrY_T0000421;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000421;transcript_name=CHM13_chrY_T0000421;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000421:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6090408	6090485	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=CHM13_chrY_T0000421;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000421;transcript_name=CHM13_chrY_T0000421;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000421:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6090486	6096319	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=CHM13_chrY_T0000421;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000421;transcript_name=CHM13_chrY_T0000421;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000421:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6096320	6096518	.	-	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1,ENST00000735429.1;transcript_id=CHM13_chrY_T0000421;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000421;transcript_name=CHM13_chrY_T0000421;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000421:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6074327	6082689	1000	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=CHM13_chrY_T0000422;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000422;gene_name=TTTY2B;ID=CHM13_chrY_T0000422;Name=TTTY2B
CHM13_chrY	CAT	exon	6074327	6075002	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=CHM13_chrY_T0000422;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000422;transcript_name=CHM13_chrY_T0000422;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000422:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6075003	6076225	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=CHM13_chrY_T0000422;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000422;transcript_name=CHM13_chrY_T0000422;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000422:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076226	6076423	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=CHM13_chrY_T0000422;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000422;transcript_name=CHM13_chrY_T0000422;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000422:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076424	6079452	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=CHM13_chrY_T0000422;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000422;transcript_name=CHM13_chrY_T0000422;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000422:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079453	6079609	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=CHM13_chrY_T0000422;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000422;transcript_name=CHM13_chrY_T0000422;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000422:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080301	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=CHM13_chrY_T0000422;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000422;transcript_name=CHM13_chrY_T0000422;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000422:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080302	6080450	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=CHM13_chrY_T0000422;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000422;transcript_name=CHM13_chrY_T0000422;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000422:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6082562	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=CHM13_chrY_T0000422;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000422;transcript_name=CHM13_chrY_T0000422;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000422:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6082563	6082689	.	-	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=CHM13_chrY_T0000422;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000422;transcript_name=CHM13_chrY_T0000422;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000422:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6074859	6096494	1000	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=CHM13_chrY_T0000423;Name=TTTY2B
CHM13_chrY	CAT	exon	6074859	6075002	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000423;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000423:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6075003	6076225	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000423;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000423:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076226	6076423	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000423;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000423:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076424	6076543	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000423;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000423:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6076544	6076622	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000423;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000423:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6076623	6079452	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000423;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000423:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6079453	6079609	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000423;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000423:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080301	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000423;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000423:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080302	6080450	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000423;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000423:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6090407	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000423;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000423:4;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6090408	6090485	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000423;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000423:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6090486	6096319	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000423;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000423:5;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6096320	6096494	.	-	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1,ENST00000735430.1;transcript_id=CHM13_chrY_T0000423;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000423;transcript_name=CHM13_chrY_T0000423;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000423:6;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6079361	6120492	1000	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=CHM13_chrY_T0000424;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_G0000101;transcript_name=CHM13_chrY_T0000424;gene_name=TTTY2B;ID=CHM13_chrY_T0000424;Name=TTTY2B
CHM13_chrY	CAT	exon	6079361	6079609	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=CHM13_chrY_T0000424;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000424;transcript_name=CHM13_chrY_T0000424;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000424:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6079610	6080301	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=CHM13_chrY_T0000424;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000424;transcript_name=CHM13_chrY_T0000424;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000424:0;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6080302	6080450	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=CHM13_chrY_T0000424;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000424;transcript_name=CHM13_chrY_T0000424;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000424:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6080451	6119899	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=CHM13_chrY_T0000424;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000424;transcript_name=CHM13_chrY_T0000424;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000424:1;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6119900	6120081	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=CHM13_chrY_T0000424;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000424;transcript_name=CHM13_chrY_T0000424;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000424:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6120082	6120429	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=CHM13_chrY_T0000424;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000424;transcript_name=CHM13_chrY_T0000424;gene_name=TTTY2B;ID=intron:CHM13_chrY_T0000424:2;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6120430	6120492	.	-	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1,ENST00000735422.1;transcript_id=CHM13_chrY_T0000424;gene_id=CHM13_chrY_G0000101;Parent=CHM13_chrY_T0000424;transcript_name=CHM13_chrY_T0000424;gene_name=TTTY2B;ID=exon:CHM13_chrY_T0000424:3;Name=TTTY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6108946	6125986	.	+	.	source_gene_common_name=TTTY7;source_gene=ENSG00000147753.11;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;gene_id=CHM13_chrY_G0000102;gene_biotype=lncRNA;gene_name=TTTY7;gene_sources=liftoff;ID=CHM13_chrY_G0000102;Name=TTTY7
CHM13_chrY	CAT	transcript	6108946	6118768	1000	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=CHM13_chrY_T0000425;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000425;gene_name=TTTY7;ID=CHM13_chrY_T0000425;Name=TTTY7
CHM13_chrY	CAT	exon	6108946	6109198	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=CHM13_chrY_T0000425;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000425;transcript_name=CHM13_chrY_T0000425;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000425:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6109199	6112839	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=CHM13_chrY_T0000425;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000425;transcript_name=CHM13_chrY_T0000425;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000425:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6112840	6112997	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=CHM13_chrY_T0000425;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000425;transcript_name=CHM13_chrY_T0000425;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000425:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6112998	6118605	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=CHM13_chrY_T0000425;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000425;transcript_name=CHM13_chrY_T0000425;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000425:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118606	6118768	.	+	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1,ENST00000735957.1;transcript_id=CHM13_chrY_T0000425;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000425;transcript_name=CHM13_chrY_T0000425;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000425:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6111403	6118777	1000	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=CHM13_chrY_T0000426;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000426;gene_name=TTTY7;ID=CHM13_chrY_T0000426;Name=TTTY7
CHM13_chrY	CAT	exon	6111403	6111715	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=CHM13_chrY_T0000426;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000426;transcript_name=CHM13_chrY_T0000426;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000426:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6111716	6112839	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=CHM13_chrY_T0000426;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000426;transcript_name=CHM13_chrY_T0000426;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000426:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6112840	6112997	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=CHM13_chrY_T0000426;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000426;transcript_name=CHM13_chrY_T0000426;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000426:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6112998	6118605	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=CHM13_chrY_T0000426;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000426;transcript_name=CHM13_chrY_T0000426;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000426:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118606	6118777	.	+	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1,ENST00000735958.1;transcript_id=CHM13_chrY_T0000426;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000426;transcript_name=CHM13_chrY_T0000426;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000426:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6111424	6118776	1000	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=CHM13_chrY_T0000427;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000427;gene_name=TTTY7;ID=CHM13_chrY_T0000427;Name=TTTY7
CHM13_chrY	CAT	exon	6111424	6111715	.	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=CHM13_chrY_T0000427;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000427;transcript_name=CHM13_chrY_T0000427;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000427:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6111716	6118605	.	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=CHM13_chrY_T0000427;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000427;transcript_name=CHM13_chrY_T0000427;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000427:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118606	6118776	.	+	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1,ENST00000735959.1;transcript_id=CHM13_chrY_T0000427;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000427;transcript_name=CHM13_chrY_T0000427;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000427:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6111425	6125986	1000	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=CHM13_chrY_T0000428;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000428;gene_name=TTTY7;ID=CHM13_chrY_T0000428;Name=TTTY7
CHM13_chrY	CAT	exon	6111425	6111715	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=CHM13_chrY_T0000428;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000428;transcript_name=CHM13_chrY_T0000428;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000428:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6111716	6112839	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=CHM13_chrY_T0000428;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000428;transcript_name=CHM13_chrY_T0000428;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000428:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6112840	6112997	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=CHM13_chrY_T0000428;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000428;transcript_name=CHM13_chrY_T0000428;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000428:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6112998	6118605	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=CHM13_chrY_T0000428;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000428;transcript_name=CHM13_chrY_T0000428;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000428:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118606	6118687	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=CHM13_chrY_T0000428;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000428;transcript_name=CHM13_chrY_T0000428;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000428:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6118688	6120907	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=CHM13_chrY_T0000428;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000428;transcript_name=CHM13_chrY_T0000428;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000428:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6120908	6121069	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=CHM13_chrY_T0000428;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000428;transcript_name=CHM13_chrY_T0000428;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000428:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6121070	6124151	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=CHM13_chrY_T0000428;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000428;transcript_name=CHM13_chrY_T0000428;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000428:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6124152	6124265	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=CHM13_chrY_T0000428;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000428;transcript_name=CHM13_chrY_T0000428;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000428:4;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6124266	6125740	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=CHM13_chrY_T0000428;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000428;transcript_name=CHM13_chrY_T0000428;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000428:4;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6125741	6125986	.	+	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1,ENST00000715683.1;transcript_id=CHM13_chrY_T0000428;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000428;transcript_name=CHM13_chrY_T0000428;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000428:5;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6111425	6125986	1000	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=CHM13_chrY_T0000429;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000429;gene_name=TTTY7;ID=CHM13_chrY_T0000429;Name=TTTY7
CHM13_chrY	CAT	exon	6111425	6111715	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=CHM13_chrY_T0000429;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000429;transcript_name=CHM13_chrY_T0000429;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000429:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6111716	6118605	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=CHM13_chrY_T0000429;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000429;transcript_name=CHM13_chrY_T0000429;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000429:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118606	6118687	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=CHM13_chrY_T0000429;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000429;transcript_name=CHM13_chrY_T0000429;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000429:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6118688	6120907	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=CHM13_chrY_T0000429;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000429;transcript_name=CHM13_chrY_T0000429;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000429:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6120908	6121069	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=CHM13_chrY_T0000429;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000429;transcript_name=CHM13_chrY_T0000429;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000429:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6121070	6124151	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=CHM13_chrY_T0000429;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000429;transcript_name=CHM13_chrY_T0000429;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000429:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6124152	6124265	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=CHM13_chrY_T0000429;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000429;transcript_name=CHM13_chrY_T0000429;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000429:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6124266	6125740	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=CHM13_chrY_T0000429;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000429;transcript_name=CHM13_chrY_T0000429;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000429:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6125741	6125986	.	+	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1,ENST00000735955.1;transcript_id=CHM13_chrY_T0000429;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000429;transcript_name=CHM13_chrY_T0000429;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000429:4;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6111425	6118776	1000	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=CHM13_chrY_T0000430;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000430;gene_name=TTTY7;ID=CHM13_chrY_T0000430;Name=TTTY7
CHM13_chrY	CAT	exon	6111425	6111715	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=CHM13_chrY_T0000430;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000430;transcript_name=CHM13_chrY_T0000430;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000430:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6111716	6112839	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=CHM13_chrY_T0000430;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000430;transcript_name=CHM13_chrY_T0000430;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000430:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6112840	6112997	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=CHM13_chrY_T0000430;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000430;transcript_name=CHM13_chrY_T0000430;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000430:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6112998	6115052	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=CHM13_chrY_T0000430;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000430;transcript_name=CHM13_chrY_T0000430;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000430:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6115053	6115186	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=CHM13_chrY_T0000430;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000430;transcript_name=CHM13_chrY_T0000430;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000430:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6115187	6115582	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=CHM13_chrY_T0000430;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000430;transcript_name=CHM13_chrY_T0000430;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000430:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6115583	6115689	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=CHM13_chrY_T0000430;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000430;transcript_name=CHM13_chrY_T0000430;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000430:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6115690	6118605	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=CHM13_chrY_T0000430;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000430;transcript_name=CHM13_chrY_T0000430;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000430:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118606	6118776	.	+	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1,ENST00000735960.1;transcript_id=CHM13_chrY_T0000430;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000430;transcript_name=CHM13_chrY_T0000430;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000430:4;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6111427	6118768	1000	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=CHM13_chrY_T0000431;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000431;gene_name=TTTY7;ID=CHM13_chrY_T0000431;Name=TTTY7
CHM13_chrY	CAT	exon	6111427	6111715	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=CHM13_chrY_T0000431;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000431;transcript_name=CHM13_chrY_T0000431;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000431:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6111716	6115582	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=CHM13_chrY_T0000431;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000431;transcript_name=CHM13_chrY_T0000431;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000431:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6115583	6115689	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=CHM13_chrY_T0000431;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000431;transcript_name=CHM13_chrY_T0000431;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000431:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6115690	6118605	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=CHM13_chrY_T0000431;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000431;transcript_name=CHM13_chrY_T0000431;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000431:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118606	6118768	.	+	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1,ENST00000735962.1;transcript_id=CHM13_chrY_T0000431;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000431;transcript_name=CHM13_chrY_T0000431;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000431:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6111428	6118774	1000	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=CHM13_chrY_T0000432;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000432;gene_name=TTTY7;ID=CHM13_chrY_T0000432;Name=TTTY7
CHM13_chrY	CAT	exon	6111428	6111715	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=CHM13_chrY_T0000432;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000432;transcript_name=CHM13_chrY_T0000432;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000432:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6111716	6115052	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=CHM13_chrY_T0000432;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000432;transcript_name=CHM13_chrY_T0000432;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000432:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6115053	6115186	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=CHM13_chrY_T0000432;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000432;transcript_name=CHM13_chrY_T0000432;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000432:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6115187	6118605	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=CHM13_chrY_T0000432;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000432;transcript_name=CHM13_chrY_T0000432;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000432:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118606	6118774	.	+	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3,ENST00000421353.3;transcript_id=CHM13_chrY_T0000432;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000432;transcript_name=CHM13_chrY_T0000432;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000432:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6111428	6118775	1000	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=CHM13_chrY_T0000433;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000433;gene_name=TTTY7;ID=CHM13_chrY_T0000433;Name=TTTY7
CHM13_chrY	CAT	exon	6111428	6111715	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=CHM13_chrY_T0000433;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000433;transcript_name=CHM13_chrY_T0000433;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000433:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6111716	6115052	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=CHM13_chrY_T0000433;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000433;transcript_name=CHM13_chrY_T0000433;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000433:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6115053	6115186	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=CHM13_chrY_T0000433;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000433;transcript_name=CHM13_chrY_T0000433;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000433:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6115187	6115582	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=CHM13_chrY_T0000433;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000433;transcript_name=CHM13_chrY_T0000433;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000433:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6115583	6115689	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=CHM13_chrY_T0000433;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000433;transcript_name=CHM13_chrY_T0000433;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000433:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6115690	6118605	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=CHM13_chrY_T0000433;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000433;transcript_name=CHM13_chrY_T0000433;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000433:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118606	6118775	.	+	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1,ENST00000735961.1;transcript_id=CHM13_chrY_T0000433;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000433;transcript_name=CHM13_chrY_T0000433;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000433:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6111429	6113083	1000	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=CHM13_chrY_T0000434;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000434;gene_name=TTTY7;ID=CHM13_chrY_T0000434;Name=TTTY7
CHM13_chrY	CAT	exon	6111429	6111715	.	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=CHM13_chrY_T0000434;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000434;transcript_name=CHM13_chrY_T0000434;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000434:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6111716	6112839	.	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=CHM13_chrY_T0000434;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000434;transcript_name=CHM13_chrY_T0000434;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000434:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6112840	6113083	.	+	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1,ENST00000735968.1;transcript_id=CHM13_chrY_T0000434;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000434;transcript_name=CHM13_chrY_T0000434;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000434:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6111450	6125983	1000	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=CHM13_chrY_T0000435;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000435;gene_name=TTTY7;ID=CHM13_chrY_T0000435;Name=TTTY7
CHM13_chrY	CAT	exon	6111450	6111715	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=CHM13_chrY_T0000435;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000435;transcript_name=CHM13_chrY_T0000435;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000435:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6111716	6118605	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=CHM13_chrY_T0000435;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000435;transcript_name=CHM13_chrY_T0000435;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000435:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118606	6118687	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=CHM13_chrY_T0000435;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000435;transcript_name=CHM13_chrY_T0000435;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000435:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6118688	6120994	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=CHM13_chrY_T0000435;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000435;transcript_name=CHM13_chrY_T0000435;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000435:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6120995	6121069	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=CHM13_chrY_T0000435;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000435;transcript_name=CHM13_chrY_T0000435;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000435:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6121070	6124151	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=CHM13_chrY_T0000435;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000435;transcript_name=CHM13_chrY_T0000435;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000435:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6124152	6124265	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=CHM13_chrY_T0000435;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000435;transcript_name=CHM13_chrY_T0000435;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000435:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6124266	6125740	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=CHM13_chrY_T0000435;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000435;transcript_name=CHM13_chrY_T0000435;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000435:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6125741	6125983	.	+	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1,ENST00000735956.1;transcript_id=CHM13_chrY_T0000435;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000435;transcript_name=CHM13_chrY_T0000435;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000435:4;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6111450	6118771	1000	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=CHM13_chrY_T0000436;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000436;gene_name=TTTY7;ID=CHM13_chrY_T0000436;Name=TTTY7
CHM13_chrY	CAT	exon	6111450	6111715	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=CHM13_chrY_T0000436;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000436;transcript_name=CHM13_chrY_T0000436;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000436:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6111716	6112839	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=CHM13_chrY_T0000436;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000436;transcript_name=CHM13_chrY_T0000436;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000436:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6112840	6112997	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=CHM13_chrY_T0000436;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000436;transcript_name=CHM13_chrY_T0000436;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000436:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6112998	6115052	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=CHM13_chrY_T0000436;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000436;transcript_name=CHM13_chrY_T0000436;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000436:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6115053	6115186	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=CHM13_chrY_T0000436;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000436;transcript_name=CHM13_chrY_T0000436;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000436:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6115187	6118605	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=CHM13_chrY_T0000436;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000436;transcript_name=CHM13_chrY_T0000436;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000436:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118606	6118771	.	+	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1,ENST00000735963.1;transcript_id=CHM13_chrY_T0000436;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000436;transcript_name=CHM13_chrY_T0000436;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000436:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6113833	6118775	1000	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=CHM13_chrY_T0000437;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000437;gene_name=TTTY7;ID=CHM13_chrY_T0000437;Name=TTTY7
CHM13_chrY	CAT	exon	6113833	6114132	.	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=CHM13_chrY_T0000437;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000437;transcript_name=CHM13_chrY_T0000437;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000437:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6114133	6118605	.	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=CHM13_chrY_T0000437;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000437;transcript_name=CHM13_chrY_T0000437;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000437:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118606	6118775	.	+	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1,ENST00000735964.1;transcript_id=CHM13_chrY_T0000437;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000437;transcript_name=CHM13_chrY_T0000437;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000437:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6117548	6125986	1000	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=CHM13_chrY_T0000438;Name=TTTY7
CHM13_chrY	CAT	exon	6117548	6117584	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000438;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000438:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6117585	6118525	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000438;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000438:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118526	6118687	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000438;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000438:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6118688	6120994	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000438;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000438:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6120995	6121069	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000438;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000438:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6121070	6121757	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000438;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000438:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6121758	6122234	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000438;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000438:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6122235	6124151	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000438;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000438:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6124152	6124265	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000438;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000438:4;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6124266	6125238	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000438;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000438:4;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6125239	6125494	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000438;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000438:5;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6125495	6125740	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000438;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000438:5;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6125741	6125986	.	+	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8,ENST00000276770.8;transcript_id=CHM13_chrY_T0000438;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000438;transcript_name=CHM13_chrY_T0000438;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000438:6;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6117548	6125986	1000	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=CHM13_chrY_T0000439;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000439;gene_name=TTTY7;ID=CHM13_chrY_T0000439;Name=TTTY7
CHM13_chrY	CAT	exon	6117548	6117584	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=CHM13_chrY_T0000439;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000439;transcript_name=CHM13_chrY_T0000439;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000439:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6117585	6118525	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=CHM13_chrY_T0000439;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000439;transcript_name=CHM13_chrY_T0000439;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000439:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6118526	6118687	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=CHM13_chrY_T0000439;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000439;transcript_name=CHM13_chrY_T0000439;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000439:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6118688	6120994	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=CHM13_chrY_T0000439;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000439;transcript_name=CHM13_chrY_T0000439;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000439:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6120995	6121069	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=CHM13_chrY_T0000439;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000439;transcript_name=CHM13_chrY_T0000439;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000439:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6121070	6121757	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=CHM13_chrY_T0000439;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000439;transcript_name=CHM13_chrY_T0000439;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000439:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6121758	6122234	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=CHM13_chrY_T0000439;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000439;transcript_name=CHM13_chrY_T0000439;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000439:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6122235	6124151	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=CHM13_chrY_T0000439;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000439;transcript_name=CHM13_chrY_T0000439;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000439:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6124152	6124265	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=CHM13_chrY_T0000439;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000439;transcript_name=CHM13_chrY_T0000439;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000439:4;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6124266	6125740	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=CHM13_chrY_T0000439;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000439;transcript_name=CHM13_chrY_T0000439;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000439:4;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6125741	6125986	.	+	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5,ENST00000457100.5;transcript_id=CHM13_chrY_T0000439;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000439;transcript_name=CHM13_chrY_T0000439;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000439:5;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6121966	6125986	1000	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=CHM13_chrY_T0000440;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000440;gene_name=TTTY7;ID=CHM13_chrY_T0000440;Name=TTTY7
CHM13_chrY	CAT	exon	6121966	6122234	.	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=CHM13_chrY_T0000440;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000440;transcript_name=CHM13_chrY_T0000440;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000440:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6122235	6125740	.	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=CHM13_chrY_T0000440;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000440;transcript_name=CHM13_chrY_T0000440;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000440:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6125741	6125986	.	+	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1,ENST00000735965.1;transcript_id=CHM13_chrY_T0000440;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000440;transcript_name=CHM13_chrY_T0000440;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000440:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6121985	6125986	1000	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=CHM13_chrY_T0000441;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000441;gene_name=TTTY7;ID=CHM13_chrY_T0000441;Name=TTTY7
CHM13_chrY	CAT	exon	6121985	6122234	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=CHM13_chrY_T0000441;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000441;transcript_name=CHM13_chrY_T0000441;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000441:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6122235	6124052	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=CHM13_chrY_T0000441;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000441;transcript_name=CHM13_chrY_T0000441;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000441:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6124053	6124265	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=CHM13_chrY_T0000441;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000441;transcript_name=CHM13_chrY_T0000441;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000441:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6124266	6125740	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=CHM13_chrY_T0000441;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000441;transcript_name=CHM13_chrY_T0000441;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000441:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6125741	6125986	.	+	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1,ENST00000449828.1;transcript_id=CHM13_chrY_T0000441;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000441;transcript_name=CHM13_chrY_T0000441;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000441:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6123148	6125986	1000	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=CHM13_chrY_T0000442;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000442;gene_name=TTTY7;ID=CHM13_chrY_T0000442;Name=TTTY7
CHM13_chrY	CAT	exon	6123148	6123511	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=CHM13_chrY_T0000442;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000442;transcript_name=CHM13_chrY_T0000442;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000442:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6123512	6124151	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=CHM13_chrY_T0000442;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000442;transcript_name=CHM13_chrY_T0000442;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000442:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6124152	6124265	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=CHM13_chrY_T0000442;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000442;transcript_name=CHM13_chrY_T0000442;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000442:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6124266	6125238	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=CHM13_chrY_T0000442;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000442;transcript_name=CHM13_chrY_T0000442;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000442:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6125239	6125494	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=CHM13_chrY_T0000442;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000442;transcript_name=CHM13_chrY_T0000442;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000442:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6125495	6125740	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=CHM13_chrY_T0000442;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000442;transcript_name=CHM13_chrY_T0000442;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000442:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6125741	6125986	.	+	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1,ENST00000735966.1;transcript_id=CHM13_chrY_T0000442;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000442;transcript_name=CHM13_chrY_T0000442;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000442:3;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6123148	6125976	1000	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=CHM13_chrY_T0000443;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_G0000102;transcript_name=CHM13_chrY_T0000443;gene_name=TTTY7;ID=CHM13_chrY_T0000443;Name=TTTY7
CHM13_chrY	CAT	exon	6123148	6123511	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=CHM13_chrY_T0000443;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000443;transcript_name=CHM13_chrY_T0000443;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000443:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6123512	6124151	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=CHM13_chrY_T0000443;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000443;transcript_name=CHM13_chrY_T0000443;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000443:0;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6124152	6124265	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=CHM13_chrY_T0000443;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000443;transcript_name=CHM13_chrY_T0000443;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000443:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6124266	6125740	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=CHM13_chrY_T0000443;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000443;transcript_name=CHM13_chrY_T0000443;gene_name=TTTY7;ID=intron:CHM13_chrY_T0000443:1;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6125741	6125976	.	+	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1,ENST00000735967.1;transcript_id=CHM13_chrY_T0000443;gene_id=CHM13_chrY_G0000102;Parent=CHM13_chrY_T0000443;transcript_name=CHM13_chrY_T0000443;gene_name=TTTY7;ID=exon:CHM13_chrY_T0000443:2;Name=TTTY7;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6130464	6141767	.	-	.	source_gene_common_name=TTTY8B;source_gene=ENSG00000185700.11;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;gene_id=CHM13_chrY_G0000103;gene_biotype=lncRNA;gene_name=TTTY8B;gene_sources=liftoff;ID=CHM13_chrY_G0000103;Name=TTTY8B
CHM13_chrY	CAT	transcript	6130464	6141753	1000	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=CHM13_chrY_T0000444;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_G0000103;transcript_name=CHM13_chrY_T0000444;gene_name=TTTY8B;ID=CHM13_chrY_T0000444;Name=TTTY8B
CHM13_chrY	CAT	exon	6130464	6131361	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=CHM13_chrY_T0000444;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000444;transcript_name=CHM13_chrY_T0000444;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000444:0;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6131362	6140888	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=CHM13_chrY_T0000444;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000444;transcript_name=CHM13_chrY_T0000444;gene_name=TTTY8B;ID=intron:CHM13_chrY_T0000444:0;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6140889	6141093	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=CHM13_chrY_T0000444;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000444;transcript_name=CHM13_chrY_T0000444;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000444:1;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6141094	6141570	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=CHM13_chrY_T0000444;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000444;transcript_name=CHM13_chrY_T0000444;gene_name=TTTY8B;ID=intron:CHM13_chrY_T0000444:1;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6141571	6141753	.	-	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1,ENST00000736416.1;transcript_id=CHM13_chrY_T0000444;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000444;transcript_name=CHM13_chrY_T0000444;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000444:2;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6131141	6141767	1000	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=CHM13_chrY_T0000445;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_G0000103;transcript_name=CHM13_chrY_T0000445;gene_name=TTTY8B;ID=CHM13_chrY_T0000445;Name=TTTY8B
CHM13_chrY	CAT	exon	6131141	6131361	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=CHM13_chrY_T0000445;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000445;transcript_name=CHM13_chrY_T0000445;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000445:0;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6131362	6140888	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=CHM13_chrY_T0000445;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000445;transcript_name=CHM13_chrY_T0000445;gene_name=TTTY8B;ID=intron:CHM13_chrY_T0000445:0;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6140889	6141093	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=CHM13_chrY_T0000445;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000445;transcript_name=CHM13_chrY_T0000445;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000445:1;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6141094	6141727	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=CHM13_chrY_T0000445;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000445;transcript_name=CHM13_chrY_T0000445;gene_name=TTTY8B;ID=intron:CHM13_chrY_T0000445:1;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6141728	6141767	.	-	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1,ENST00000736417.1;transcript_id=CHM13_chrY_T0000445;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000445;transcript_name=CHM13_chrY_T0000445;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000445:2;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6138849	6141737	1000	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=CHM13_chrY_T0000446;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_G0000103;transcript_name=CHM13_chrY_T0000446;gene_name=TTTY8B;ID=CHM13_chrY_T0000446;Name=TTTY8B
CHM13_chrY	CAT	exon	6138849	6139025	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=CHM13_chrY_T0000446;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000446;transcript_name=CHM13_chrY_T0000446;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000446:0;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6139026	6140888	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=CHM13_chrY_T0000446;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000446;transcript_name=CHM13_chrY_T0000446;gene_name=TTTY8B;ID=intron:CHM13_chrY_T0000446:0;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6140889	6141093	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=CHM13_chrY_T0000446;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000446;transcript_name=CHM13_chrY_T0000446;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000446:1;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6141094	6141570	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=CHM13_chrY_T0000446;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000446;transcript_name=CHM13_chrY_T0000446;gene_name=TTTY8B;ID=intron:CHM13_chrY_T0000446:1;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6141571	6141737	.	-	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6,ENST00000455570.6;transcript_id=CHM13_chrY_T0000446;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000446;transcript_name=CHM13_chrY_T0000446;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000446:2;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6139107	6141731	1000	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=CHM13_chrY_T0000447;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_G0000103;transcript_name=CHM13_chrY_T0000447;gene_name=TTTY8B;ID=CHM13_chrY_T0000447;Name=TTTY8B
CHM13_chrY	CAT	exon	6139107	6139296	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=CHM13_chrY_T0000447;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000447;transcript_name=CHM13_chrY_T0000447;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000447:0;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6139297	6140888	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=CHM13_chrY_T0000447;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000447;transcript_name=CHM13_chrY_T0000447;gene_name=TTTY8B;ID=intron:CHM13_chrY_T0000447:0;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6140889	6141093	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=CHM13_chrY_T0000447;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000447;transcript_name=CHM13_chrY_T0000447;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000447:1;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6141094	6141570	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=CHM13_chrY_T0000447;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000447;transcript_name=CHM13_chrY_T0000447;gene_name=TTTY8B;ID=intron:CHM13_chrY_T0000447:1;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6141571	6141731	.	-	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5,ENST00000328819.5;transcript_id=CHM13_chrY_T0000447;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000447;transcript_name=CHM13_chrY_T0000447;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000447:2;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6139107	6141767	1000	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=CHM13_chrY_T0000448;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_G0000103;transcript_name=CHM13_chrY_T0000448;gene_name=TTTY8B;ID=CHM13_chrY_T0000448;Name=TTTY8B
CHM13_chrY	CAT	exon	6139107	6139296	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=CHM13_chrY_T0000448;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000448;transcript_name=CHM13_chrY_T0000448;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000448:0;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6139297	6140888	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=CHM13_chrY_T0000448;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000448;transcript_name=CHM13_chrY_T0000448;gene_name=TTTY8B;ID=intron:CHM13_chrY_T0000448:0;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6140889	6141093	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=CHM13_chrY_T0000448;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000448;transcript_name=CHM13_chrY_T0000448;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000448:1;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6141094	6141727	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=CHM13_chrY_T0000448;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000448;transcript_name=CHM13_chrY_T0000448;gene_name=TTTY8B;ID=intron:CHM13_chrY_T0000448:1;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6141728	6141767	.	-	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1,ENST00000736418.1;transcript_id=CHM13_chrY_T0000448;gene_id=CHM13_chrY_G0000103;Parent=CHM13_chrY_T0000448;transcript_name=CHM13_chrY_T0000448;gene_name=TTTY8B;ID=exon:CHM13_chrY_T0000448:2;Name=TTTY8B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6161061	6164842	.	-	.	source_gene_common_name=ENSG00000235895;source_gene=ENSG00000235895.1;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;gene_id=CHM13_chrY_G0000104;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000235895;gene_sources=liftoff;ID=CHM13_chrY_G0000104;Name=ENSG00000235895
CHM13_chrY	CAT	transcript	6161061	6164842	1000	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=CHM13_chrY_T0000449;gene_id=CHM13_chrY_G0000104;Parent=CHM13_chrY_G0000104;transcript_name=CHM13_chrY_T0000449;gene_name=ENSG00000235895;ID=CHM13_chrY_T0000449;Name=ENSG00000235895
CHM13_chrY	CAT	exon	6161061	6161156	.	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=CHM13_chrY_T0000449;gene_id=CHM13_chrY_G0000104;Parent=CHM13_chrY_T0000449;transcript_name=CHM13_chrY_T0000449;gene_name=ENSG00000235895;ID=exon:CHM13_chrY_T0000449:0;Name=ENSG00000235895;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6161157	6164669	.	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=CHM13_chrY_T0000449;gene_id=CHM13_chrY_G0000104;Parent=CHM13_chrY_T0000449;transcript_name=CHM13_chrY_T0000449;gene_name=ENSG00000235895;ID=intron:CHM13_chrY_T0000449:0;Name=ENSG00000235895;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6164670	6164842	.	-	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=CHM13_chrY_T0000449;gene_id=CHM13_chrY_G0000104;Parent=CHM13_chrY_T0000449;transcript_name=CHM13_chrY_T0000449;gene_name=ENSG00000235895;ID=exon:CHM13_chrY_T0000449:1;Name=ENSG00000235895;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6188548	6189015	.	+	.	source_gene_common_name=TSPY17P;source_gene=ENSG00000232620.1;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;gene_id=CHM13_chrY_G0000105;gene_biotype=unprocessed_pseudogene;gene_name=TSPY17P;gene_sources=liftoff;ID=CHM13_chrY_G0000105;Name=TSPY17P
CHM13_chrY	CAT	transcript	6188548	6189015	1000	+	.	source_transcript=ENST00000450329.1;source_transcript_name=TSPY17P-201;source_gene=ENSG00000232620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450329.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY17P;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;transcript_id=CHM13_chrY_T0000450;gene_id=CHM13_chrY_G0000105;Parent=CHM13_chrY_G0000105;transcript_name=CHM13_chrY_T0000450;gene_name=TSPY17P;ID=CHM13_chrY_T0000450;Name=TSPY17P
CHM13_chrY	CAT	exon	6188548	6189015	.	+	.	source_transcript=ENST00000450329.1;source_transcript_name=TSPY17P-201;source_gene=ENSG00000232620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450329.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY17P;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;transcript_id=CHM13_chrY_T0000450;gene_id=CHM13_chrY_G0000105;Parent=CHM13_chrY_T0000450;transcript_name=CHM13_chrY_T0000450;gene_name=TSPY17P;ID=exon:CHM13_chrY_T0000450:0;Name=TSPY17P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6371278	6371496	.	-	.	source_gene_common_name=SRIP3;source_gene=ENSG00000224953.1;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;gene_id=CHM13_chrY_G0000106;gene_biotype=processed_pseudogene;gene_name=SRIP3;gene_sources=liftoff;ID=CHM13_chrY_G0000106;Name=SRIP3
CHM13_chrY	CAT	transcript	6371278	6371496	1000	-	.	source_transcript=ENST00000413200.1;source_transcript_name=SRIP3-201;source_gene=ENSG00000224953.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224953.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413200.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRIP3;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;transcript_id=CHM13_chrY_T0000451;gene_id=CHM13_chrY_G0000106;Parent=CHM13_chrY_G0000106;transcript_name=CHM13_chrY_T0000451;gene_name=SRIP3;ID=CHM13_chrY_T0000451;Name=SRIP3
CHM13_chrY	CAT	exon	6371278	6371496	.	-	.	source_transcript=ENST00000413200.1;source_transcript_name=SRIP3-201;source_gene=ENSG00000224953.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224953.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRIP3;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;transcript_id=CHM13_chrY_T0000451;gene_id=CHM13_chrY_G0000106;Parent=CHM13_chrY_T0000451;transcript_name=CHM13_chrY_T0000451;gene_name=SRIP3;ID=exon:CHM13_chrY_T0000451:0;Name=SRIP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6441470	6441661	.	+	.	source_gene_common_name=ENSG00000274365;source_gene=ENSG00000274365.1;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;gene_id=CHM13_chrY_G0000107;gene_biotype=processed_pseudogene;gene_name=ENSG00000274365;gene_sources=liftoff;ID=CHM13_chrY_G0000107;Name=ENSG00000274365
CHM13_chrY	CAT	transcript	6441470	6441661	1000	+	.	source_transcript=ENST00000610687.1;source_transcript_name=ENST00000610687;source_gene=ENSG00000274365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610687.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274365;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;transcript_id=CHM13_chrY_T0000452;gene_id=CHM13_chrY_G0000107;Parent=CHM13_chrY_G0000107;transcript_name=CHM13_chrY_T0000452;gene_name=ENSG00000274365;ID=CHM13_chrY_T0000452;Name=ENSG00000274365
CHM13_chrY	CAT	exon	6441470	6441661	.	+	.	source_transcript=ENST00000610687.1;source_transcript_name=ENST00000610687;source_gene=ENSG00000274365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274365;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;transcript_id=CHM13_chrY_T0000452;gene_id=CHM13_chrY_G0000107;Parent=CHM13_chrY_T0000452;transcript_name=CHM13_chrY_T0000452;gene_name=ENSG00000274365;ID=exon:CHM13_chrY_T0000452:0;Name=ENSG00000274365;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6490030	6490575	.	+	.	source_gene_common_name=GOT2P5;source_gene=ENSG00000233634.1;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;gene_id=CHM13_chrY_G0000108;gene_biotype=processed_pseudogene;gene_name=GOT2P5;gene_sources=liftoff;ID=CHM13_chrY_G0000108;Name=GOT2P5
CHM13_chrY	CAT	transcript	6490030	6490575	1000	+	.	source_transcript=ENST00000433995.1;source_transcript_name=GOT2P5-201;source_gene=ENSG00000233634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000433995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433995.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOT2P5;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;transcript_id=CHM13_chrY_T0000453;gene_id=CHM13_chrY_G0000108;Parent=CHM13_chrY_G0000108;transcript_name=CHM13_chrY_T0000453;gene_name=GOT2P5;ID=CHM13_chrY_T0000453;Name=GOT2P5
CHM13_chrY	CAT	exon	6490030	6490575	.	+	.	source_transcript=ENST00000433995.1;source_transcript_name=GOT2P5-201;source_gene=ENSG00000233634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000433995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433995.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOT2P5;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;transcript_id=CHM13_chrY_T0000453;gene_id=CHM13_chrY_G0000108;Parent=CHM13_chrY_T0000453;transcript_name=CHM13_chrY_T0000453;gene_name=GOT2P5;ID=exon:CHM13_chrY_T0000453:0;Name=GOT2P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6518242	6564080	.	-	.	source_gene_common_name=AMELY;source_gene=ENSG00000099721.16;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;gene_id=CHM13_chrY_G0000109;gene_biotype=protein_coding;gene_name=AMELY;gene_sources=liftoff;ID=CHM13_chrY_G0000109;Name=AMELY
CHM13_chrY	CAT	transcript	6518242	6564080	100	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_G0000109;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=CHM13_chrY_T0000454;Name=AMELY
CHM13_chrY	CAT	exon	6518242	6518402	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=exon:CHM13_chrY_T0000454:0;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6518397	6518402	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=CDS:CHM13_chrY_T0000454:0;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	6518397	6518399	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=stop_codon:CHM13_chrY_T0000454;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6518403	6520361	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=intron:CHM13_chrY_T0000454:0;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6520362	6520787	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=exon:CHM13_chrY_T0000454:1;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6520362	6520787	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=CDS:CHM13_chrY_T0000454:1;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6520788	6521056	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=intron:CHM13_chrY_T0000454:1;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6521057	6521101	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=exon:CHM13_chrY_T0000454:2;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6521057	6521101	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=CDS:CHM13_chrY_T0000454:2;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6521102	6522331	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=intron:CHM13_chrY_T0000454:2;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6522332	6522379	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=exon:CHM13_chrY_T0000454:3;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6522332	6522379	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=CDS:CHM13_chrY_T0000454:3;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6522380	6524880	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=intron:CHM13_chrY_T0000454:3;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6524881	6524946	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=exon:CHM13_chrY_T0000454:4;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6524881	6524934	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=CDS:CHM13_chrY_T0000454:4;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	6524932	6524934	.	-	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=start_codon:CHM13_chrY_T0000454;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6524947	6526297	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=intron:CHM13_chrY_T0000454:4;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6526298	6526397	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=exon:CHM13_chrY_T0000454:5;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6526398	6564000	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=intron:CHM13_chrY_T0000454:5;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6564001	6564080	.	-	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=CHM13_chrY_T0000454;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000454;transcript_name=CHM13_chrY_T0000454;gene_name=AMELY;ID=exon:CHM13_chrY_T0000454:6;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6518397	6524934	100	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_G0000109;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=CHM13_chrY_T0000455;Name=AMELY
CHM13_chrY	CAT	exon	6518397	6518402	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=exon:CHM13_chrY_T0000455:0;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6518397	6518402	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=CDS:CHM13_chrY_T0000455:0;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	6518397	6518399	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=stop_codon:CHM13_chrY_T0000455;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6518403	6520361	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=intron:CHM13_chrY_T0000455:0;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6520362	6520787	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=exon:CHM13_chrY_T0000455:1;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6520362	6520787	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=CDS:CHM13_chrY_T0000455:1;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6520788	6521056	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=intron:CHM13_chrY_T0000455:1;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6521057	6521101	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=exon:CHM13_chrY_T0000455:2;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6521057	6521101	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=CDS:CHM13_chrY_T0000455:2;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6521102	6521192	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=intron:CHM13_chrY_T0000455:2;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6521193	6521234	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=exon:CHM13_chrY_T0000455:3;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6521193	6521234	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=CDS:CHM13_chrY_T0000455:3;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6521235	6522331	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=intron:CHM13_chrY_T0000455:3;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6522332	6522379	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=exon:CHM13_chrY_T0000455:4;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6522332	6522379	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=CDS:CHM13_chrY_T0000455:4;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6522380	6524880	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=intron:CHM13_chrY_T0000455:4;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6524881	6524934	.	-	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=exon:CHM13_chrY_T0000455:5;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6524881	6524934	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=CDS:CHM13_chrY_T0000455:5;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	6524932	6524934	.	-	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=CHM13_chrY_T0000455;gene_id=CHM13_chrY_G0000109;Parent=CHM13_chrY_T0000455;transcript_name=CHM13_chrY_T0000455;gene_name=AMELY;ID=start_codon:CHM13_chrY_T0000455;Name=AMELY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6553080	6553700	.	+	.	source_gene_common_name=ATP5PFP1;source_gene=ENSG00000237701.1;gene_id=CHM13_chrY_G0000110;gene_biotype=processed_pseudogene;gene_name=ATP5PFP1;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000110;Name=ATP5PFP1
CHM13_chrY	CAT	transcript	6553080	6553700	1000	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=transMap;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;transcript_id=CHM13_chrY_T0000456;gene_id=CHM13_chrY_G0000110;Parent=CHM13_chrY_G0000110;transcript_name=CHM13_chrY_T0000456;gene_name=ATP5PFP1;ID=CHM13_chrY_T0000456;Name=ATP5PFP1
CHM13_chrY	CAT	exon	6553080	6553175	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=transMap;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;transcript_id=CHM13_chrY_T0000456;gene_id=CHM13_chrY_G0000110;Parent=CHM13_chrY_T0000456;transcript_name=CHM13_chrY_T0000456;gene_name=ATP5PFP1;ID=exon:CHM13_chrY_T0000456:0;Name=ATP5PFP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6553176	6553474	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=transMap;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;transcript_id=CHM13_chrY_T0000456;gene_id=CHM13_chrY_G0000110;Parent=CHM13_chrY_T0000456;transcript_name=CHM13_chrY_T0000456;gene_name=ATP5PFP1;ID=intron:CHM13_chrY_T0000456:0;Name=ATP5PFP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6553475	6553700	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=transMap;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;transcript_id=CHM13_chrY_T0000456;gene_id=CHM13_chrY_G0000110;Parent=CHM13_chrY_T0000456;transcript_name=CHM13_chrY_T0000456;gene_name=ATP5PFP1;ID=exon:CHM13_chrY_T0000456:1;Name=ATP5PFP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6553080	6553700	1000	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1;transcript_id=CHM13_chrY_T0000457;gene_id=CHM13_chrY_G0000110;Parent=CHM13_chrY_G0000110;transcript_name=CHM13_chrY_T0000457;gene_name=ATP5PFP1;ID=CHM13_chrY_T0000457;Name=ATP5PFP1
CHM13_chrY	CAT	exon	6553080	6553176	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1;transcript_id=CHM13_chrY_T0000457;gene_id=CHM13_chrY_G0000110;Parent=CHM13_chrY_T0000457;transcript_name=CHM13_chrY_T0000457;gene_name=ATP5PFP1;ID=exon:CHM13_chrY_T0000457:0;Name=ATP5PFP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6553177	6553474	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1;transcript_id=CHM13_chrY_T0000457;gene_id=CHM13_chrY_G0000110;Parent=CHM13_chrY_T0000457;transcript_name=CHM13_chrY_T0000457;gene_name=ATP5PFP1;ID=intron:CHM13_chrY_T0000457:0;Name=ATP5PFP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6553475	6553700	.	+	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1;transcript_id=CHM13_chrY_T0000457;gene_id=CHM13_chrY_G0000110;Parent=CHM13_chrY_T0000457;transcript_name=CHM13_chrY_T0000457;gene_name=ATP5PFP1;ID=exon:CHM13_chrY_T0000457:1;Name=ATP5PFP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6563014	6754300	.	+	.	source_gene_common_name=TBL1Y;source_gene=ENSG00000092377.15;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;gene_id=CHM13_chrY_G0000111;gene_biotype=protein_coding;gene_name=TBL1Y;gene_sources=liftoff;ID=CHM13_chrY_G0000111;Name=TBL1Y
CHM13_chrY	CAT	transcript	6563014	6744013	100	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_G0000111;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CHM13_chrY_T0000458;Name=TBL1Y
CHM13_chrY	CAT	exon	6563014	6563310	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:0;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6563311	6564415	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:0;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6564416	6564500	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:1;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6564501	6630539	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:1;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6630540	6630570	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:2;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6630571	6673779	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:2;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6673780	6673868	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:3;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6673869	6677364	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:3;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6677365	6677472	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:4;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6677415	6677472	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:0;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	6677415	6677417	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=start_codon:CHM13_chrY_T0000458;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6677473	6695308	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:4;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6695309	6695454	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:5;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6695309	6695454	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:1;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6695455	6716228	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:5;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6716229	6716481	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:6;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6716229	6716481	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:2;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6716482	6722527	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:6;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6722528	6722660	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:7;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6722528	6722660	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:3;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6722661	6723051	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:7;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6723052	6723193	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:8;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6723052	6723193	.	+	1	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:4;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6723194	6723891	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:8;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6723892	6723955	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:9;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6723892	6723955	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:5;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6723956	6724064	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:9;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6724065	6724162	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:10;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6724065	6724162	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:6;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6724163	6726891	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:10;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6726892	6726952	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:11;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6726892	6726952	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:7;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6726953	6733063	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:11;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6733064	6733185	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:12;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6733064	6733185	.	+	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:8;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6733186	6738227	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:12;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6738228	6738302	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:13;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6738228	6738302	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:9;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6738303	6738619	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:13;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6738620	6738747	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:14;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6738620	6738747	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:10;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6738748	6739596	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:14;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6739597	6739762	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:15;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6739597	6739762	.	+	1	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:11;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6739763	6742418	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:15;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6742419	6742520	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:16;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6742419	6742520	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:12;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6742521	6743801	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000458:16;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6743802	6744013	.	+	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000458:17;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6743802	6743822	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000458:13;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	6743820	6743822	.	+	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=CHM13_chrY_T0000458;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000458;transcript_name=CHM13_chrY_T0000458;gene_name=TBL1Y;ID=stop_codon:CHM13_chrY_T0000458;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6563014	6744013	100	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_G0000111;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CHM13_chrY_T0000459;Name=TBL1Y
CHM13_chrY	CAT	exon	6563014	6563310	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:0;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6563311	6564415	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:0;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6564416	6564500	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:1;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6564501	6648135	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:1;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6648136	6648230	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:2;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6648231	6673779	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:2;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6673780	6673868	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:3;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6673869	6677364	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:3;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6677365	6677472	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:4;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6677415	6677472	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:0;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	6677415	6677417	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=start_codon:CHM13_chrY_T0000459;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6677473	6695308	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:4;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6695309	6695454	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:5;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6695309	6695454	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:1;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6695455	6716228	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:5;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6716229	6716481	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:6;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6716229	6716481	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:2;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6716482	6722527	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:6;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6722528	6722660	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:7;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6722528	6722660	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:3;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6722661	6723051	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:7;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6723052	6723193	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:8;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6723052	6723193	.	+	1	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:4;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6723194	6723891	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:8;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6723892	6723955	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:9;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6723892	6723955	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:5;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6723956	6724064	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:9;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6724065	6724162	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:10;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6724065	6724162	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:6;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6724163	6726891	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:10;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6726892	6726952	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:11;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6726892	6726952	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:7;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6726953	6733063	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:11;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6733064	6733185	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:12;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6733064	6733185	.	+	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:8;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6733186	6738227	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:12;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6738228	6738302	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:13;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6738228	6738302	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:9;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6738303	6738619	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:13;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6738620	6738747	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:14;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6738620	6738747	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:10;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6738748	6739596	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:14;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6739597	6739762	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:15;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6739597	6739762	.	+	1	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:11;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6739763	6742418	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:15;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6742419	6742520	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:16;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6742419	6742520	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:12;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6742521	6743801	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000459:16;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6743802	6744013	.	+	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000459:17;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6743802	6743822	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000459:13;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	6743820	6743822	.	+	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=CHM13_chrY_T0000459;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000459;transcript_name=CHM13_chrY_T0000459;gene_name=TBL1Y;ID=stop_codon:CHM13_chrY_T0000459;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6563025	6744013	100	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_G0000111;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CHM13_chrY_T0000460;Name=TBL1Y
CHM13_chrY	CAT	exon	6563025	6563310	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:0;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6563311	6564415	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:0;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6564416	6564500	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:1;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6564501	6630539	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:1;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6630540	6630570	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:2;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6630571	6648135	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:2;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6648136	6648230	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:3;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6648231	6673779	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:3;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6673780	6673868	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:4;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6673869	6677364	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:4;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6677365	6677472	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:5;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6677415	6677472	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:0;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	6677415	6677417	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=start_codon:CHM13_chrY_T0000460;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6677473	6695308	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:5;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6695309	6695454	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:6;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6695309	6695454	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:1;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6695455	6716228	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:6;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6716229	6716481	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:7;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6716229	6716481	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:2;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6716482	6722527	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:7;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6722528	6722660	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:8;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6722528	6722660	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:3;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6722661	6723051	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:8;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6723052	6723193	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:9;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6723052	6723193	.	+	1	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:4;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6723194	6723891	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:9;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6723892	6723955	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:10;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6723892	6723955	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:5;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6723956	6724064	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:10;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6724065	6724162	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:11;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6724065	6724162	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:6;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6724163	6726891	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:11;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6726892	6726952	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:12;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6726892	6726952	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:7;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6726953	6733063	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:12;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6733064	6733185	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:13;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6733064	6733185	.	+	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:8;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6733186	6738227	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:13;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6738228	6738302	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:14;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6738228	6738302	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:9;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6738303	6738619	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:14;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6738620	6738747	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:15;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6738620	6738747	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:10;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6738748	6739596	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:15;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6739597	6739762	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:16;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6739597	6739762	.	+	1	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:11;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6739763	6742418	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:16;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6742419	6742520	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:17;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6742419	6742520	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:12;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6742521	6743801	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000460:17;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6743802	6744013	.	+	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000460:18;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6743802	6743822	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000460:13;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	6743820	6743822	.	+	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=CHM13_chrY_T0000460;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000460;transcript_name=CHM13_chrY_T0000460;gene_name=TBL1Y;ID=stop_codon:CHM13_chrY_T0000460;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6738711	6754300	100	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_G0000111;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=CHM13_chrY_T0000462;Name=TBL1Y
CHM13_chrY	CAT	exon	6738711	6738747	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000462:0;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6738711	6738747	.	+	2	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000462:0;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6738748	6739596	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000462:0;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6739597	6739762	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000462:1;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6739597	6739762	.	+	1	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000462:1;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6739763	6742418	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000462:1;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6742419	6742520	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000462:2;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6742419	6742520	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000462:2;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6742521	6753114	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000462:2;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6753115	6753180	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000462:3;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6753115	6753180	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000462:3;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6753181	6754148	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=intron:CHM13_chrY_T0000462:3;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6754149	6754300	.	+	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=exon:CHM13_chrY_T0000462:4;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	6754149	6754196	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=CDS:CHM13_chrY_T0000462:4;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	6754194	6754196	.	+	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=CHM13_chrY_T0000462;gene_id=CHM13_chrY_G0000111;Parent=CHM13_chrY_T0000462;transcript_name=CHM13_chrY_T0000462;gene_name=TBL1Y;ID=stop_codon:CHM13_chrY_T0000462;Name=TBL1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6571010	6573119	.	+	.	source_gene_common_name=ENSG00000273906;source_gene=ENSG00000273906.1;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;gene_id=CHM13_chrY_G0000112;gene_biotype=lncRNA;gene_name=ENSG00000273906;gene_sources=liftoff;ID=CHM13_chrY_G0000112;Name=ENSG00000273906
CHM13_chrY	CAT	transcript	6571010	6573119	1000	+	.	source_transcript=ENST00000620503.1;source_transcript_name=ENST00000620503;source_gene=ENSG00000273906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000273906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000620503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620503.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273906;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;transcript_id=CHM13_chrY_T0000461;gene_id=CHM13_chrY_G0000112;Parent=CHM13_chrY_G0000112;transcript_name=CHM13_chrY_T0000461;gene_name=ENSG00000273906;ID=CHM13_chrY_T0000461;Name=ENSG00000273906
CHM13_chrY	CAT	exon	6571010	6573119	.	+	.	source_transcript=ENST00000620503.1;source_transcript_name=ENST00000620503;source_gene=ENSG00000273906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000273906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000620503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620503.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273906;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;transcript_id=CHM13_chrY_T0000461;gene_id=CHM13_chrY_G0000112;Parent=CHM13_chrY_T0000461;transcript_name=CHM13_chrY_T0000461;gene_name=ENSG00000273906;ID=exon:CHM13_chrY_T0000461:0;Name=ENSG00000273906;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6752399	6830129	.	-	.	source_gene_common_name=ENSG00000309393;source_gene=ENSG00000309393.1;gene_id=CHM13_chrY_G0000113;gene_biotype=lncRNA;gene_name=ENSG00000309393;gene_sources=liftoff;ID=CHM13_chrY_G0000113;Name=ENSG00000309393
CHM13_chrY	CAT	transcript	6752399	6830139	1000	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=CHM13_chrY_T0000463;gene_id=CHM13_chrY_G0000113;Parent=CHM13_chrY_G0000113;transcript_name=CHM13_chrY_T0000463;gene_name=ENSG00000309393;ID=CHM13_chrY_T0000463;Name=ENSG00000309393
CHM13_chrY	CAT	exon	6752399	6753157	.	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=CHM13_chrY_T0000463;gene_id=CHM13_chrY_G0000113;Parent=CHM13_chrY_T0000463;transcript_name=CHM13_chrY_T0000463;gene_name=ENSG00000309393;ID=exon:CHM13_chrY_T0000463:0;Name=ENSG00000309393;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6753158	6829986	.	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=CHM13_chrY_T0000463;gene_id=CHM13_chrY_G0000113;Parent=CHM13_chrY_T0000463;transcript_name=CHM13_chrY_T0000463;gene_name=ENSG00000309393;ID=intron:CHM13_chrY_T0000463:0;Name=ENSG00000309393;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6829987	6830139	.	-	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=CHM13_chrY_T0000463;gene_id=CHM13_chrY_G0000113;Parent=CHM13_chrY_T0000463;transcript_name=CHM13_chrY_T0000463;gene_name=ENSG00000309393;ID=exon:CHM13_chrY_T0000463:1;Name=ENSG00000309393;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6752726	6830129	1000	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=CHM13_chrY_T0000464;gene_id=CHM13_chrY_G0000113;Parent=CHM13_chrY_G0000113;transcript_name=CHM13_chrY_T0000464;gene_name=ENSG00000309393;ID=CHM13_chrY_T0000464;Name=ENSG00000309393
CHM13_chrY	CAT	exon	6752726	6753157	.	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=CHM13_chrY_T0000464;gene_id=CHM13_chrY_G0000113;Parent=CHM13_chrY_T0000464;transcript_name=CHM13_chrY_T0000464;gene_name=ENSG00000309393;ID=exon:CHM13_chrY_T0000464:0;Name=ENSG00000309393;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6753158	6830026	.	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=CHM13_chrY_T0000464;gene_id=CHM13_chrY_G0000113;Parent=CHM13_chrY_T0000464;transcript_name=CHM13_chrY_T0000464;gene_name=ENSG00000309393;ID=intron:CHM13_chrY_T0000464:0;Name=ENSG00000309393;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6830027	6830129	.	-	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=CHM13_chrY_T0000464;gene_id=CHM13_chrY_G0000113;Parent=CHM13_chrY_T0000464;transcript_name=CHM13_chrY_T0000464;gene_name=ENSG00000309393;ID=exon:CHM13_chrY_T0000464:1;Name=ENSG00000309393;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6752727	6759051	1000	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=CHM13_chrY_T0000465;gene_id=CHM13_chrY_G0000113;Parent=CHM13_chrY_G0000113;transcript_name=CHM13_chrY_T0000465;gene_name=ENSG00000309393;ID=CHM13_chrY_T0000465;Name=ENSG00000309393
CHM13_chrY	CAT	exon	6752727	6753157	.	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=CHM13_chrY_T0000465;gene_id=CHM13_chrY_G0000113;Parent=CHM13_chrY_T0000465;transcript_name=CHM13_chrY_T0000465;gene_name=ENSG00000309393;ID=exon:CHM13_chrY_T0000465:0;Name=ENSG00000309393;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6753158	6758886	.	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=CHM13_chrY_T0000465;gene_id=CHM13_chrY_G0000113;Parent=CHM13_chrY_T0000465;transcript_name=CHM13_chrY_T0000465;gene_name=ENSG00000309393;ID=intron:CHM13_chrY_T0000465:0;Name=ENSG00000309393;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6758887	6759051	.	-	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=CHM13_chrY_T0000465;gene_id=CHM13_chrY_G0000113;Parent=CHM13_chrY_T0000465;transcript_name=CHM13_chrY_T0000465;gene_name=ENSG00000309393;ID=exon:CHM13_chrY_T0000465:1;Name=ENSG00000309393;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6753063	6758832	.	-	.	source_gene_common_name=GPR143YP;source_gene=ENSG00000232583.1;gene_id=CHM13_chrY_G0000114;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GPR143YP;gene_sources=liftoff;ID=CHM13_chrY_G0000114;Name=GPR143YP
CHM13_chrY	CAT	transcript	6753063	6758832	1000	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=CHM13_chrY_T0000466;gene_id=CHM13_chrY_G0000114;Parent=CHM13_chrY_G0000114;transcript_name=CHM13_chrY_T0000466;gene_name=GPR143YP;ID=CHM13_chrY_T0000466;Name=GPR143YP
CHM13_chrY	CAT	exon	6753063	6753157	.	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=CHM13_chrY_T0000466;gene_id=CHM13_chrY_G0000114;Parent=CHM13_chrY_T0000466;transcript_name=CHM13_chrY_T0000466;gene_name=GPR143YP;ID=exon:CHM13_chrY_T0000466:0;Name=GPR143YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6753158	6758722	.	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=CHM13_chrY_T0000466;gene_id=CHM13_chrY_G0000114;Parent=CHM13_chrY_T0000466;transcript_name=CHM13_chrY_T0000466;gene_name=GPR143YP;ID=intron:CHM13_chrY_T0000466:0;Name=GPR143YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6758723	6758832	.	-	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=CHM13_chrY_T0000466;gene_id=CHM13_chrY_G0000114;Parent=CHM13_chrY_T0000466;transcript_name=CHM13_chrY_T0000466;gene_name=GPR143YP;ID=exon:CHM13_chrY_T0000466:1;Name=GPR143YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6926299	7033871	.	+	.	source_gene_common_name=PRKY;source_gene=ENSG00000293442.2;gene_id=CHM13_chrY_G0000115;gene_biotype=lncRNA;gene_name=PRKY;gene_sources=liftoff;ID=CHM13_chrY_G0000115;Name=PRKY
CHM13_chrY	CAT	transcript	6926299	7033871	1000	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_G0000115;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=CHM13_chrY_T0000467;Name=PRKY
CHM13_chrY	CAT	exon	6926299	6926805	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=exon:CHM13_chrY_T0000467:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6926806	6956259	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=intron:CHM13_chrY_T0000467:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6956260	6956428	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=exon:CHM13_chrY_T0000467:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6956429	6978229	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=intron:CHM13_chrY_T0000467:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6978230	6978493	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=exon:CHM13_chrY_T0000467:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6978494	6993438	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=intron:CHM13_chrY_T0000467:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6993439	6993558	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=exon:CHM13_chrY_T0000467:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6993559	7008455	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=intron:CHM13_chrY_T0000467:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7008456	7008551	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=exon:CHM13_chrY_T0000467:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7008552	7019678	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=intron:CHM13_chrY_T0000467:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7019679	7019756	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=exon:CHM13_chrY_T0000467:5;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7019757	7024065	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=intron:CHM13_chrY_T0000467:5;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7024066	7024212	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=exon:CHM13_chrY_T0000467:6;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7024213	7028034	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=intron:CHM13_chrY_T0000467:6;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7028035	7033871	.	+	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000467;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000467;transcript_name=CHM13_chrY_T0000467;gene_name=PRKY;ID=exon:CHM13_chrY_T0000467:7;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6926904	6943084	1000	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000469;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_G0000115;transcript_name=CHM13_chrY_T0000469;gene_name=PRKY;ID=CHM13_chrY_T0000469;Name=PRKY
CHM13_chrY	CAT	exon	6926904	6927392	.	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000469;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000469;transcript_name=CHM13_chrY_T0000469;gene_name=PRKY;ID=exon:CHM13_chrY_T0000469:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6927393	6942841	.	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000469;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000469;transcript_name=CHM13_chrY_T0000469;gene_name=PRKY;ID=intron:CHM13_chrY_T0000469:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6942842	6943084	.	+	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000469;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000469;transcript_name=CHM13_chrY_T0000469;gene_name=PRKY;ID=exon:CHM13_chrY_T0000469:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6927101	6943084	1000	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000470;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_G0000115;transcript_name=CHM13_chrY_T0000470;gene_name=PRKY;ID=CHM13_chrY_T0000470;Name=PRKY
CHM13_chrY	CAT	exon	6927101	6927392	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000470;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000470;transcript_name=CHM13_chrY_T0000470;gene_name=PRKY;ID=exon:CHM13_chrY_T0000470:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6927393	6937354	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000470;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000470;transcript_name=CHM13_chrY_T0000470;gene_name=PRKY;ID=intron:CHM13_chrY_T0000470:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6937355	6937446	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000470;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000470;transcript_name=CHM13_chrY_T0000470;gene_name=PRKY;ID=exon:CHM13_chrY_T0000470:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6937447	6942841	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000470;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000470;transcript_name=CHM13_chrY_T0000470;gene_name=PRKY;ID=intron:CHM13_chrY_T0000470:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6942842	6943084	.	+	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000470;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000470;transcript_name=CHM13_chrY_T0000470;gene_name=PRKY;ID=exon:CHM13_chrY_T0000470:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6927153	7028422	1000	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_G0000115;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=CHM13_chrY_T0000471;Name=PRKY
CHM13_chrY	CAT	exon	6927153	6927392	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=exon:CHM13_chrY_T0000471:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6927393	6956259	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=intron:CHM13_chrY_T0000471:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6956260	6956428	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=exon:CHM13_chrY_T0000471:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6956429	6978229	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=intron:CHM13_chrY_T0000471:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6978230	6978493	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=exon:CHM13_chrY_T0000471:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6978494	6980350	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=intron:CHM13_chrY_T0000471:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6980351	6980472	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=exon:CHM13_chrY_T0000471:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6980473	6993438	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=intron:CHM13_chrY_T0000471:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6993439	6993558	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=exon:CHM13_chrY_T0000471:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6993559	7008455	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=intron:CHM13_chrY_T0000471:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7008456	7008551	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=exon:CHM13_chrY_T0000471:5;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7008552	7019678	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=intron:CHM13_chrY_T0000471:5;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7019679	7019756	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=exon:CHM13_chrY_T0000471:6;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7019757	7024065	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=intron:CHM13_chrY_T0000471:6;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7024066	7024212	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=exon:CHM13_chrY_T0000471:7;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7024213	7028034	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=intron:CHM13_chrY_T0000471:7;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7028035	7028422	.	+	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000471;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000471;transcript_name=CHM13_chrY_T0000471;gene_name=PRKY;ID=exon:CHM13_chrY_T0000471:8;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6927245	6994539	1000	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000472;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_G0000115;transcript_name=CHM13_chrY_T0000472;gene_name=PRKY;ID=CHM13_chrY_T0000472;Name=PRKY
CHM13_chrY	CAT	exon	6927245	6927392	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000472;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000472;transcript_name=CHM13_chrY_T0000472;gene_name=PRKY;ID=exon:CHM13_chrY_T0000472:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6927393	6956259	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000472;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000472;transcript_name=CHM13_chrY_T0000472;gene_name=PRKY;ID=intron:CHM13_chrY_T0000472:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6956260	6956428	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000472;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000472;transcript_name=CHM13_chrY_T0000472;gene_name=PRKY;ID=exon:CHM13_chrY_T0000472:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6956429	6978229	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000472;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000472;transcript_name=CHM13_chrY_T0000472;gene_name=PRKY;ID=intron:CHM13_chrY_T0000472:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6978230	6978493	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000472;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000472;transcript_name=CHM13_chrY_T0000472;gene_name=PRKY;ID=exon:CHM13_chrY_T0000472:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6978494	6993438	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000472;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000472;transcript_name=CHM13_chrY_T0000472;gene_name=PRKY;ID=intron:CHM13_chrY_T0000472:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6993439	6994539	.	+	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000472;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000472;transcript_name=CHM13_chrY_T0000472;gene_name=PRKY;ID=exon:CHM13_chrY_T0000472:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6927289	7028750	1000	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_G0000115;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=CHM13_chrY_T0000473;Name=PRKY
CHM13_chrY	CAT	exon	6927289	6927392	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000473;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=exon:CHM13_chrY_T0000473:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6927393	6956259	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000473;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=intron:CHM13_chrY_T0000473:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6956260	6956428	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000473;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=exon:CHM13_chrY_T0000473:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6956429	6978229	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000473;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=intron:CHM13_chrY_T0000473:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6978230	6978493	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000473;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=exon:CHM13_chrY_T0000473:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6978494	7008455	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000473;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=intron:CHM13_chrY_T0000473:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7008456	7008551	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000473;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=exon:CHM13_chrY_T0000473:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7008552	7019678	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000473;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=intron:CHM13_chrY_T0000473:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7019679	7019756	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000473;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=exon:CHM13_chrY_T0000473:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7019757	7024065	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000473;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=intron:CHM13_chrY_T0000473:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7024066	7024212	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000473;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=exon:CHM13_chrY_T0000473:5;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7024213	7028034	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000473;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=intron:CHM13_chrY_T0000473:5;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7028035	7028750	.	+	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000473;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000473;transcript_name=CHM13_chrY_T0000473;gene_name=PRKY;ID=exon:CHM13_chrY_T0000473:6;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6978391	6980727	1000	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000475;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_G0000115;transcript_name=CHM13_chrY_T0000475;gene_name=PRKY;ID=CHM13_chrY_T0000475;Name=PRKY
CHM13_chrY	CAT	exon	6978391	6978493	.	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000475;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000475;transcript_name=CHM13_chrY_T0000475;gene_name=PRKY;ID=exon:CHM13_chrY_T0000475:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6978494	6980350	.	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000475;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000475;transcript_name=CHM13_chrY_T0000475;gene_name=PRKY;ID=intron:CHM13_chrY_T0000475:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6980351	6980727	.	+	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000475;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000475;transcript_name=CHM13_chrY_T0000475;gene_name=PRKY;ID=exon:CHM13_chrY_T0000475:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6985354	7008544	1000	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000476;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_G0000115;transcript_name=CHM13_chrY_T0000476;gene_name=PRKY;ID=CHM13_chrY_T0000476;Name=PRKY
CHM13_chrY	CAT	exon	6985354	6985432	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000476;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000476;transcript_name=CHM13_chrY_T0000476;gene_name=PRKY;ID=exon:CHM13_chrY_T0000476:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6985433	6993438	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000476;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000476;transcript_name=CHM13_chrY_T0000476;gene_name=PRKY;ID=intron:CHM13_chrY_T0000476:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6993439	6993558	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000476;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000476;transcript_name=CHM13_chrY_T0000476;gene_name=PRKY;ID=exon:CHM13_chrY_T0000476:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6993559	7008455	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000476;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000476;transcript_name=CHM13_chrY_T0000476;gene_name=PRKY;ID=intron:CHM13_chrY_T0000476:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7008456	7008544	.	+	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000476;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000476;transcript_name=CHM13_chrY_T0000476;gene_name=PRKY;ID=exon:CHM13_chrY_T0000476:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6992284	7028422	1000	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000477;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_G0000115;transcript_name=CHM13_chrY_T0000477;gene_name=PRKY;ID=CHM13_chrY_T0000477;Name=PRKY
CHM13_chrY	CAT	exon	6992284	6992346	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000477;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000477;transcript_name=CHM13_chrY_T0000477;gene_name=PRKY;ID=exon:CHM13_chrY_T0000477:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6992347	6993438	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000477;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000477;transcript_name=CHM13_chrY_T0000477;gene_name=PRKY;ID=intron:CHM13_chrY_T0000477:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6993439	6993558	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000477;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000477;transcript_name=CHM13_chrY_T0000477;gene_name=PRKY;ID=exon:CHM13_chrY_T0000477:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6993559	7008455	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000477;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000477;transcript_name=CHM13_chrY_T0000477;gene_name=PRKY;ID=intron:CHM13_chrY_T0000477:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7008456	7008551	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000477;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000477;transcript_name=CHM13_chrY_T0000477;gene_name=PRKY;ID=exon:CHM13_chrY_T0000477:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7008552	7019678	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000477;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000477;transcript_name=CHM13_chrY_T0000477;gene_name=PRKY;ID=intron:CHM13_chrY_T0000477:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7019679	7019756	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000477;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000477;transcript_name=CHM13_chrY_T0000477;gene_name=PRKY;ID=exon:CHM13_chrY_T0000477:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7019757	7024065	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000477;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000477;transcript_name=CHM13_chrY_T0000477;gene_name=PRKY;ID=intron:CHM13_chrY_T0000477:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7024066	7024212	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000477;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000477;transcript_name=CHM13_chrY_T0000477;gene_name=PRKY;ID=exon:CHM13_chrY_T0000477:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7024213	7028034	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000477;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000477;transcript_name=CHM13_chrY_T0000477;gene_name=PRKY;ID=intron:CHM13_chrY_T0000477:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7028035	7028422	.	+	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000477;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000477;transcript_name=CHM13_chrY_T0000477;gene_name=PRKY;ID=exon:CHM13_chrY_T0000477:5;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6992285	7025438	1000	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000478;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_G0000115;transcript_name=CHM13_chrY_T0000478;gene_name=PRKY;ID=CHM13_chrY_T0000478;Name=PRKY
CHM13_chrY	CAT	exon	6992285	6992346	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000478;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000478;transcript_name=CHM13_chrY_T0000478;gene_name=PRKY;ID=exon:CHM13_chrY_T0000478:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6992347	6993438	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000478;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000478;transcript_name=CHM13_chrY_T0000478;gene_name=PRKY;ID=intron:CHM13_chrY_T0000478:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6993439	6993558	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000478;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000478;transcript_name=CHM13_chrY_T0000478;gene_name=PRKY;ID=exon:CHM13_chrY_T0000478:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6993559	7008455	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000478;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000478;transcript_name=CHM13_chrY_T0000478;gene_name=PRKY;ID=intron:CHM13_chrY_T0000478:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7008456	7008551	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000478;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000478;transcript_name=CHM13_chrY_T0000478;gene_name=PRKY;ID=exon:CHM13_chrY_T0000478:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7008552	7019678	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000478;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000478;transcript_name=CHM13_chrY_T0000478;gene_name=PRKY;ID=intron:CHM13_chrY_T0000478:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7019679	7019756	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000478;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000478;transcript_name=CHM13_chrY_T0000478;gene_name=PRKY;ID=exon:CHM13_chrY_T0000478:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7019757	7024065	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000478;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000478;transcript_name=CHM13_chrY_T0000478;gene_name=PRKY;ID=intron:CHM13_chrY_T0000478:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7024066	7024212	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000478;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000478;transcript_name=CHM13_chrY_T0000478;gene_name=PRKY;ID=exon:CHM13_chrY_T0000478:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7024213	7025054	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000478;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000478;transcript_name=CHM13_chrY_T0000478;gene_name=PRKY;ID=intron:CHM13_chrY_T0000478:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7025055	7025438	.	+	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000478;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000478;transcript_name=CHM13_chrY_T0000478;gene_name=PRKY;ID=exon:CHM13_chrY_T0000478:5;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	6992343	7028423	1000	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000479;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_G0000115;transcript_name=CHM13_chrY_T0000479;gene_name=PRKY;ID=CHM13_chrY_T0000479;Name=PRKY
CHM13_chrY	CAT	exon	6992343	6992488	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000479;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000479;transcript_name=CHM13_chrY_T0000479;gene_name=PRKY;ID=exon:CHM13_chrY_T0000479:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6992489	6993438	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000479;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000479;transcript_name=CHM13_chrY_T0000479;gene_name=PRKY;ID=intron:CHM13_chrY_T0000479:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6993439	6993558	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000479;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000479;transcript_name=CHM13_chrY_T0000479;gene_name=PRKY;ID=exon:CHM13_chrY_T0000479:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6993559	7008455	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000479;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000479;transcript_name=CHM13_chrY_T0000479;gene_name=PRKY;ID=intron:CHM13_chrY_T0000479:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7008456	7008551	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000479;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000479;transcript_name=CHM13_chrY_T0000479;gene_name=PRKY;ID=exon:CHM13_chrY_T0000479:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7008552	7019678	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000479;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000479;transcript_name=CHM13_chrY_T0000479;gene_name=PRKY;ID=intron:CHM13_chrY_T0000479:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7019679	7019756	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000479;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000479;transcript_name=CHM13_chrY_T0000479;gene_name=PRKY;ID=exon:CHM13_chrY_T0000479:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7019757	7024065	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000479;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000479;transcript_name=CHM13_chrY_T0000479;gene_name=PRKY;ID=intron:CHM13_chrY_T0000479:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7024066	7024212	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000479;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000479;transcript_name=CHM13_chrY_T0000479;gene_name=PRKY;ID=exon:CHM13_chrY_T0000479:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7024213	7028034	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000479;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000479;transcript_name=CHM13_chrY_T0000479;gene_name=PRKY;ID=intron:CHM13_chrY_T0000479:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7028035	7028423	.	+	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000479;gene_id=CHM13_chrY_G0000115;Parent=CHM13_chrY_T0000479;transcript_name=CHM13_chrY_T0000479;gene_name=PRKY;ID=exon:CHM13_chrY_T0000479:5;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6926640	7024191	.	+	.	source_gene_common_name=PRKY;source_gene=ENSG00000099725.15;gene_id=CHM13_chrY_G0000116;gene_biotype=transcribed_unitary_pseudogene;gene_name=PRKY;gene_sources=liftoff;ID=CHM13_chrY_G0000116;Name=PRKY
CHM13_chrY	CAT	transcript	6926640	7024191	1000	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_G0000116;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=CHM13_chrY_T0000468;Name=PRKY
CHM13_chrY	CAT	exon	6926640	6926805	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_T0000468;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=exon:CHM13_chrY_T0000468:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6926806	6956259	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_T0000468;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=intron:CHM13_chrY_T0000468:0;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6956260	6956428	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_T0000468;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=exon:CHM13_chrY_T0000468:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6956429	6978229	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_T0000468;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=intron:CHM13_chrY_T0000468:1;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6978230	6978493	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_T0000468;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=exon:CHM13_chrY_T0000468:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6978494	6993438	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_T0000468;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=intron:CHM13_chrY_T0000468:2;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	6993439	6993558	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_T0000468;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=exon:CHM13_chrY_T0000468:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	6993559	7008455	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_T0000468;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=intron:CHM13_chrY_T0000468:3;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7008456	7008551	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_T0000468;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=exon:CHM13_chrY_T0000468:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7008552	7019678	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_T0000468;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=intron:CHM13_chrY_T0000468:4;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7019679	7019756	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_T0000468;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=exon:CHM13_chrY_T0000468:5;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7019757	7024065	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_T0000468;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=intron:CHM13_chrY_T0000468:5;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7024066	7024191	.	+	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=CHM13_chrY_T0000468;gene_id=CHM13_chrY_G0000116;Parent=CHM13_chrY_T0000468;transcript_name=CHM13_chrY_T0000468;gene_name=PRKY;ID=exon:CHM13_chrY_T0000468:6;Name=PRKY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6976621	6976919	.	-	.	source_gene_common_name=RN7SKP282;source_gene=ENSG00000252633.1;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;gene_id=CHM13_chrY_G0000117;gene_biotype=misc_RNA;gene_name=RN7SKP282;gene_sources=liftoff;ID=CHM13_chrY_G0000117;Name=RN7SKP282
CHM13_chrY	CAT	transcript	6976621	6976919	1000	-	.	source_transcript=ENST00000516824.1;source_transcript_name=RN7SKP282-201;source_gene=ENSG00000252633.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000252633.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516824.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SKP282;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;transcript_id=CHM13_chrY_T0000474;gene_id=CHM13_chrY_G0000117;Parent=CHM13_chrY_G0000117;transcript_name=CHM13_chrY_T0000474;gene_name=RN7SKP282;ID=CHM13_chrY_T0000474;Name=RN7SKP282
CHM13_chrY	CAT	exon	6976621	6976919	.	-	.	source_transcript=ENST00000516824.1;source_transcript_name=RN7SKP282-201;source_gene=ENSG00000252633.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000252633.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516824.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SKP282;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;transcript_id=CHM13_chrY_T0000474;gene_id=CHM13_chrY_G0000117;Parent=CHM13_chrY_T0000474;transcript_name=CHM13_chrY_T0000474;gene_name=RN7SKP282;ID=exon:CHM13_chrY_T0000474:0;Name=RN7SKP282;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	6993855	6993966	.	+	.	source_gene_common_name=Y_RNA;source_gene=ENSG00000251996.1;gene_id=CHM13_chrY_G0000118;gene_biotype=misc_RNA;gene_name=Y_RNA;gene_sources=liftoff;ID=CHM13_chrY_G0000118;Name=Y_RNA
CHM13_chrY	CAT	transcript	6993855	6993966	1000	+	.	source_transcript=ENST00000516187.1;source_transcript_name=Y_RNA.666-201;source_gene=ENSG00000251996.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000251996.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Y_RNA;transcript_id=CHM13_chrY_T0000480;gene_id=CHM13_chrY_G0000118;Parent=CHM13_chrY_G0000118;transcript_name=CHM13_chrY_T0000480;gene_name=Y_RNA;ID=CHM13_chrY_T0000480;Name=Y_RNA
CHM13_chrY	CAT	exon	6993855	6993966	.	+	.	source_transcript=ENST00000516187.1;source_transcript_name=Y_RNA.666-201;source_gene=ENSG00000251996.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000251996.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Y_RNA;transcript_id=CHM13_chrY_T0000480;gene_id=CHM13_chrY_G0000118;Parent=CHM13_chrY_T0000480;transcript_name=CHM13_chrY_T0000480;gene_name=Y_RNA;ID=exon:CHM13_chrY_T0000480:0;Name=Y_RNA;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7030995	7031102	.	+	.	source_gene_common_name=RNU6-941P;source_gene=ENSG00000252155.1;gene_id=CHM13_chrY_G0000119;gene_biotype=snRNA;gene_name=RNU6-941P;gene_sources=liftoff;ID=CHM13_chrY_G0000119;Name=RNU6-941P
CHM13_chrY	CAT	transcript	7030995	7031102	1000	+	.	source_transcript=ENST00000516346.1;source_transcript_name=RNU6-941P-201;source_gene=ENSG00000252155.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252155.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-941P;transcript_id=CHM13_chrY_T0000481;gene_id=CHM13_chrY_G0000119;Parent=CHM13_chrY_G0000119;transcript_name=CHM13_chrY_T0000481;gene_name=RNU6-941P;ID=CHM13_chrY_T0000481;Name=RNU6-941P
CHM13_chrY	CAT	exon	7030995	7031102	.	+	.	source_transcript=ENST00000516346.1;source_transcript_name=RNU6-941P-201;source_gene=ENSG00000252155.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252155.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-941P;transcript_id=CHM13_chrY_T0000481;gene_id=CHM13_chrY_G0000119;Parent=CHM13_chrY_T0000481;transcript_name=CHM13_chrY_T0000481;gene_name=RNU6-941P;ID=exon:CHM13_chrY_T0000481:0;Name=RNU6-941P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7075377	7075481	.	-	.	source_gene_common_name=RNU6-521P;source_gene=ENSG00000252472.1;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;gene_id=CHM13_chrY_G0000120;gene_biotype=snRNA;gene_name=RNU6-521P;gene_sources=liftoff;ID=CHM13_chrY_G0000120;Name=RNU6-521P
CHM13_chrY	CAT	transcript	7075377	7075481	1000	-	.	source_transcript=ENST00000516663.1;source_transcript_name=RNU6-521P-201;source_gene=ENSG00000252472.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252472.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516663.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-521P;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;transcript_id=CHM13_chrY_T0000482;gene_id=CHM13_chrY_G0000120;Parent=CHM13_chrY_G0000120;transcript_name=CHM13_chrY_T0000482;gene_name=RNU6-521P;ID=CHM13_chrY_T0000482;Name=RNU6-521P
CHM13_chrY	CAT	exon	7075377	7075481	.	-	.	source_transcript=ENST00000516663.1;source_transcript_name=RNU6-521P-201;source_gene=ENSG00000252472.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252472.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516663.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-521P;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;transcript_id=CHM13_chrY_T0000482;gene_id=CHM13_chrY_G0000120;Parent=CHM13_chrY_T0000482;transcript_name=CHM13_chrY_T0000482;gene_name=RNU6-521P;ID=exon:CHM13_chrY_T0000482:0;Name=RNU6-521P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7086811	7172899	.	+	.	source_gene_common_name=ENSG00000295056;source_gene=ENSG00000295056.1;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;gene_id=CHM13_chrY_G0000121;gene_biotype=lncRNA;gene_name=ENSG00000295056;gene_sources=liftoff;ID=CHM13_chrY_G0000121;Name=ENSG00000295056
CHM13_chrY	CAT	transcript	7086811	7172899	1000	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=CHM13_chrY_T0000483;gene_id=CHM13_chrY_G0000121;Parent=CHM13_chrY_G0000121;transcript_name=CHM13_chrY_T0000483;gene_name=ENSG00000295056;ID=CHM13_chrY_T0000483;Name=ENSG00000295056
CHM13_chrY	CAT	exon	7086811	7086900	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=CHM13_chrY_T0000483;gene_id=CHM13_chrY_G0000121;Parent=CHM13_chrY_T0000483;transcript_name=CHM13_chrY_T0000483;gene_name=ENSG00000295056;ID=exon:CHM13_chrY_T0000483:0;Name=ENSG00000295056;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7086901	7153341	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=CHM13_chrY_T0000483;gene_id=CHM13_chrY_G0000121;Parent=CHM13_chrY_T0000483;transcript_name=CHM13_chrY_T0000483;gene_name=ENSG00000295056;ID=intron:CHM13_chrY_T0000483:0;Name=ENSG00000295056;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7153342	7153500	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=CHM13_chrY_T0000483;gene_id=CHM13_chrY_G0000121;Parent=CHM13_chrY_T0000483;transcript_name=CHM13_chrY_T0000483;gene_name=ENSG00000295056;ID=exon:CHM13_chrY_T0000483:1;Name=ENSG00000295056;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7153501	7171293	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=CHM13_chrY_T0000483;gene_id=CHM13_chrY_G0000121;Parent=CHM13_chrY_T0000483;transcript_name=CHM13_chrY_T0000483;gene_name=ENSG00000295056;ID=intron:CHM13_chrY_T0000483:1;Name=ENSG00000295056;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7171294	7171402	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=CHM13_chrY_T0000483;gene_id=CHM13_chrY_G0000121;Parent=CHM13_chrY_T0000483;transcript_name=CHM13_chrY_T0000483;gene_name=ENSG00000295056;ID=exon:CHM13_chrY_T0000483:2;Name=ENSG00000295056;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7171403	7172434	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=CHM13_chrY_T0000483;gene_id=CHM13_chrY_G0000121;Parent=CHM13_chrY_T0000483;transcript_name=CHM13_chrY_T0000483;gene_name=ENSG00000295056;ID=intron:CHM13_chrY_T0000483:2;Name=ENSG00000295056;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7172435	7172899	.	+	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=CHM13_chrY_T0000483;gene_id=CHM13_chrY_G0000121;Parent=CHM13_chrY_T0000483;transcript_name=CHM13_chrY_T0000483;gene_name=ENSG00000295056;ID=exon:CHM13_chrY_T0000483:3;Name=ENSG00000295056;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7309673	7310057	.	+	.	source_gene_common_name=ENSG00000275280;source_gene=ENSG00000275280.1;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;gene_id=CHM13_chrY_G0000122;gene_biotype=processed_pseudogene;gene_name=ENSG00000275280;gene_sources=liftoff;ID=CHM13_chrY_G0000122;Name=ENSG00000275280
CHM13_chrY	CAT	transcript	7309673	7310057	1000	+	.	source_transcript=ENST00000619838.1;source_transcript_name=ENST00000619838;source_gene=ENSG00000275280.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275280.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619838.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275280;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;transcript_id=CHM13_chrY_T0000484;gene_id=CHM13_chrY_G0000122;Parent=CHM13_chrY_G0000122;transcript_name=CHM13_chrY_T0000484;gene_name=ENSG00000275280;ID=CHM13_chrY_T0000484;Name=ENSG00000275280
CHM13_chrY	CAT	exon	7309673	7310057	.	+	.	source_transcript=ENST00000619838.1;source_transcript_name=ENST00000619838;source_gene=ENSG00000275280.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275280.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619838.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275280;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;transcript_id=CHM13_chrY_T0000484;gene_id=CHM13_chrY_G0000122;Parent=CHM13_chrY_T0000484;transcript_name=CHM13_chrY_T0000484;gene_name=ENSG00000275280;ID=exon:CHM13_chrY_T0000484:0;Name=ENSG00000275280;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7324423	7328704	.	-	.	source_gene_common_name=RBMY2HP;source_gene=ENSG00000238073.1;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;gene_id=CHM13_chrY_G0000123;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2HP;gene_sources=liftoff;ID=CHM13_chrY_G0000123;Name=RBMY2HP
CHM13_chrY	CAT	transcript	7324423	7328704	1000	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=CHM13_chrY_T0000485;gene_id=CHM13_chrY_G0000123;Parent=CHM13_chrY_G0000123;transcript_name=CHM13_chrY_T0000485;gene_name=RBMY2HP;ID=CHM13_chrY_T0000485;Name=RBMY2HP
CHM13_chrY	CAT	exon	7324423	7324722	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=CHM13_chrY_T0000485;gene_id=CHM13_chrY_G0000123;Parent=CHM13_chrY_T0000485;transcript_name=CHM13_chrY_T0000485;gene_name=RBMY2HP;ID=exon:CHM13_chrY_T0000485:0;Name=RBMY2HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7324723	7325129	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=CHM13_chrY_T0000485;gene_id=CHM13_chrY_G0000123;Parent=CHM13_chrY_T0000485;transcript_name=CHM13_chrY_T0000485;gene_name=RBMY2HP;ID=intron:CHM13_chrY_T0000485:0;Name=RBMY2HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7325130	7325218	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=CHM13_chrY_T0000485;gene_id=CHM13_chrY_G0000123;Parent=CHM13_chrY_T0000485;transcript_name=CHM13_chrY_T0000485;gene_name=RBMY2HP;ID=exon:CHM13_chrY_T0000485:1;Name=RBMY2HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7325219	7325307	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=CHM13_chrY_T0000485;gene_id=CHM13_chrY_G0000123;Parent=CHM13_chrY_T0000485;transcript_name=CHM13_chrY_T0000485;gene_name=RBMY2HP;ID=intron:CHM13_chrY_T0000485:1;Name=RBMY2HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7325308	7325418	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=CHM13_chrY_T0000485;gene_id=CHM13_chrY_G0000123;Parent=CHM13_chrY_T0000485;transcript_name=CHM13_chrY_T0000485;gene_name=RBMY2HP;ID=exon:CHM13_chrY_T0000485:2;Name=RBMY2HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7325419	7328045	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=CHM13_chrY_T0000485;gene_id=CHM13_chrY_G0000123;Parent=CHM13_chrY_T0000485;transcript_name=CHM13_chrY_T0000485;gene_name=RBMY2HP;ID=intron:CHM13_chrY_T0000485:2;Name=RBMY2HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7328046	7328151	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=CHM13_chrY_T0000485;gene_id=CHM13_chrY_G0000123;Parent=CHM13_chrY_T0000485;transcript_name=CHM13_chrY_T0000485;gene_name=RBMY2HP;ID=exon:CHM13_chrY_T0000485:3;Name=RBMY2HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7328152	7328590	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=CHM13_chrY_T0000485;gene_id=CHM13_chrY_G0000123;Parent=CHM13_chrY_T0000485;transcript_name=CHM13_chrY_T0000485;gene_name=RBMY2HP;ID=intron:CHM13_chrY_T0000485:3;Name=RBMY2HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7328591	7328704	.	-	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=CHM13_chrY_T0000485;gene_id=CHM13_chrY_G0000123;Parent=CHM13_chrY_T0000485;transcript_name=CHM13_chrY_T0000485;gene_name=RBMY2HP;ID=exon:CHM13_chrY_T0000485:4;Name=RBMY2HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7331580	7333709	.	+	.	source_gene_common_name=ENSG00000223422;source_gene=ENSG00000223422.1;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;gene_id=CHM13_chrY_G0000124;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000223422;gene_sources=liftoff;ID=CHM13_chrY_G0000124;Name=ENSG00000223422
CHM13_chrY	CAT	transcript	7331580	7333709	1000	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=CHM13_chrY_T0000486;gene_id=CHM13_chrY_G0000124;Parent=CHM13_chrY_G0000124;transcript_name=CHM13_chrY_T0000486;gene_name=ENSG00000223422;ID=CHM13_chrY_T0000486;Name=ENSG00000223422
CHM13_chrY	CAT	exon	7331580	7331891	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=CHM13_chrY_T0000486;gene_id=CHM13_chrY_G0000124;Parent=CHM13_chrY_T0000486;transcript_name=CHM13_chrY_T0000486;gene_name=ENSG00000223422;ID=exon:CHM13_chrY_T0000486:0;Name=ENSG00000223422;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7331892	7332947	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=CHM13_chrY_T0000486;gene_id=CHM13_chrY_G0000124;Parent=CHM13_chrY_T0000486;transcript_name=CHM13_chrY_T0000486;gene_name=ENSG00000223422;ID=intron:CHM13_chrY_T0000486:0;Name=ENSG00000223422;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7332948	7333013	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=CHM13_chrY_T0000486;gene_id=CHM13_chrY_G0000124;Parent=CHM13_chrY_T0000486;transcript_name=CHM13_chrY_T0000486;gene_name=ENSG00000223422;ID=exon:CHM13_chrY_T0000486:1;Name=ENSG00000223422;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7333014	7333208	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=CHM13_chrY_T0000486;gene_id=CHM13_chrY_G0000124;Parent=CHM13_chrY_T0000486;transcript_name=CHM13_chrY_T0000486;gene_name=ENSG00000223422;ID=intron:CHM13_chrY_T0000486:1;Name=ENSG00000223422;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7333209	7333301	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=CHM13_chrY_T0000486;gene_id=CHM13_chrY_G0000124;Parent=CHM13_chrY_T0000486;transcript_name=CHM13_chrY_T0000486;gene_name=ENSG00000223422;ID=exon:CHM13_chrY_T0000486:2;Name=ENSG00000223422;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7333302	7333400	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=CHM13_chrY_T0000486;gene_id=CHM13_chrY_G0000124;Parent=CHM13_chrY_T0000486;transcript_name=CHM13_chrY_T0000486;gene_name=ENSG00000223422;ID=intron:CHM13_chrY_T0000486:2;Name=ENSG00000223422;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7333401	7333545	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=CHM13_chrY_T0000486;gene_id=CHM13_chrY_G0000124;Parent=CHM13_chrY_T0000486;transcript_name=CHM13_chrY_T0000486;gene_name=ENSG00000223422;ID=exon:CHM13_chrY_T0000486:3;Name=ENSG00000223422;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7333546	7333663	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=CHM13_chrY_T0000486;gene_id=CHM13_chrY_G0000124;Parent=CHM13_chrY_T0000486;transcript_name=CHM13_chrY_T0000486;gene_name=ENSG00000223422;ID=intron:CHM13_chrY_T0000486:3;Name=ENSG00000223422;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7333664	7333709	.	+	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=CHM13_chrY_T0000486;gene_id=CHM13_chrY_G0000124;Parent=CHM13_chrY_T0000486;transcript_name=CHM13_chrY_T0000486;gene_name=ENSG00000223422;ID=exon:CHM13_chrY_T0000486:4;Name=ENSG00000223422;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7340412	7342221	.	-	.	source_gene_common_name=TSPY12P;source_gene=ENSG00000236435.1;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;gene_id=CHM13_chrY_G0000125;gene_biotype=unprocessed_pseudogene;gene_name=TSPY12P;gene_sources=liftoff;ID=CHM13_chrY_G0000125;Name=TSPY12P
CHM13_chrY	CAT	transcript	7340412	7342221	1000	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=CHM13_chrY_T0000487;gene_id=CHM13_chrY_G0000125;Parent=CHM13_chrY_G0000125;transcript_name=CHM13_chrY_T0000487;gene_name=TSPY12P;ID=CHM13_chrY_T0000487;Name=TSPY12P
CHM13_chrY	CAT	exon	7340412	7340476	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=CHM13_chrY_T0000487;gene_id=CHM13_chrY_G0000125;Parent=CHM13_chrY_T0000487;transcript_name=CHM13_chrY_T0000487;gene_name=TSPY12P;ID=exon:CHM13_chrY_T0000487:0;Name=TSPY12P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7340477	7340569	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=CHM13_chrY_T0000487;gene_id=CHM13_chrY_G0000125;Parent=CHM13_chrY_T0000487;transcript_name=CHM13_chrY_T0000487;gene_name=TSPY12P;ID=intron:CHM13_chrY_T0000487:0;Name=TSPY12P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7340570	7340715	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=CHM13_chrY_T0000487;gene_id=CHM13_chrY_G0000125;Parent=CHM13_chrY_T0000487;transcript_name=CHM13_chrY_T0000487;gene_name=TSPY12P;ID=exon:CHM13_chrY_T0000487:1;Name=TSPY12P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7340716	7340813	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=CHM13_chrY_T0000487;gene_id=CHM13_chrY_G0000125;Parent=CHM13_chrY_T0000487;transcript_name=CHM13_chrY_T0000487;gene_name=TSPY12P;ID=intron:CHM13_chrY_T0000487:1;Name=TSPY12P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7340814	7340924	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=CHM13_chrY_T0000487;gene_id=CHM13_chrY_G0000125;Parent=CHM13_chrY_T0000487;transcript_name=CHM13_chrY_T0000487;gene_name=TSPY12P;ID=exon:CHM13_chrY_T0000487:2;Name=TSPY12P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7340925	7341055	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=CHM13_chrY_T0000487;gene_id=CHM13_chrY_G0000125;Parent=CHM13_chrY_T0000487;transcript_name=CHM13_chrY_T0000487;gene_name=TSPY12P;ID=intron:CHM13_chrY_T0000487:2;Name=TSPY12P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7341056	7341129	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=CHM13_chrY_T0000487;gene_id=CHM13_chrY_G0000125;Parent=CHM13_chrY_T0000487;transcript_name=CHM13_chrY_T0000487;gene_name=TSPY12P;ID=exon:CHM13_chrY_T0000487:3;Name=TSPY12P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7341130	7341749	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=CHM13_chrY_T0000487;gene_id=CHM13_chrY_G0000125;Parent=CHM13_chrY_T0000487;transcript_name=CHM13_chrY_T0000487;gene_name=TSPY12P;ID=intron:CHM13_chrY_T0000487:3;Name=TSPY12P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7341750	7342221	.	-	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=CHM13_chrY_T0000487;gene_id=CHM13_chrY_G0000125;Parent=CHM13_chrY_T0000487;transcript_name=CHM13_chrY_T0000487;gene_name=TSPY12P;ID=exon:CHM13_chrY_T0000487:4;Name=TSPY12P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7343184	7345351	.	+	.	source_gene_common_name=ENSG00000236690;source_gene=ENSG00000236690.2;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;gene_id=CHM13_chrY_G0000126;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236690;gene_sources=liftoff;ID=CHM13_chrY_G0000126;Name=ENSG00000236690
CHM13_chrY	CAT	transcript	7343184	7345351	1000	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=CHM13_chrY_T0000488;gene_id=CHM13_chrY_G0000126;Parent=CHM13_chrY_G0000126;transcript_name=CHM13_chrY_T0000488;gene_name=ENSG00000236690;ID=CHM13_chrY_T0000488;Name=ENSG00000236690
CHM13_chrY	CAT	exon	7343184	7343510	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=CHM13_chrY_T0000488;gene_id=CHM13_chrY_G0000126;Parent=CHM13_chrY_T0000488;transcript_name=CHM13_chrY_T0000488;gene_name=ENSG00000236690;ID=exon:CHM13_chrY_T0000488:0;Name=ENSG00000236690;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7343511	7344832	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=CHM13_chrY_T0000488;gene_id=CHM13_chrY_G0000126;Parent=CHM13_chrY_T0000488;transcript_name=CHM13_chrY_T0000488;gene_name=ENSG00000236690;ID=intron:CHM13_chrY_T0000488:0;Name=ENSG00000236690;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7344833	7344950	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=CHM13_chrY_T0000488;gene_id=CHM13_chrY_G0000126;Parent=CHM13_chrY_T0000488;transcript_name=CHM13_chrY_T0000488;gene_name=ENSG00000236690;ID=exon:CHM13_chrY_T0000488:1;Name=ENSG00000236690;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7344951	7345036	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=CHM13_chrY_T0000488;gene_id=CHM13_chrY_G0000126;Parent=CHM13_chrY_T0000488;transcript_name=CHM13_chrY_T0000488;gene_name=ENSG00000236690;ID=intron:CHM13_chrY_T0000488:1;Name=ENSG00000236690;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7345037	7345206	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=CHM13_chrY_T0000488;gene_id=CHM13_chrY_G0000126;Parent=CHM13_chrY_T0000488;transcript_name=CHM13_chrY_T0000488;gene_name=ENSG00000236690;ID=exon:CHM13_chrY_T0000488:2;Name=ENSG00000236690;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7345207	7345304	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=CHM13_chrY_T0000488;gene_id=CHM13_chrY_G0000126;Parent=CHM13_chrY_T0000488;transcript_name=CHM13_chrY_T0000488;gene_name=ENSG00000236690;ID=intron:CHM13_chrY_T0000488:2;Name=ENSG00000236690;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7345305	7345351	.	+	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=CHM13_chrY_T0000488;gene_id=CHM13_chrY_G0000126;Parent=CHM13_chrY_T0000488;transcript_name=CHM13_chrY_T0000488;gene_name=ENSG00000236690;ID=exon:CHM13_chrY_T0000488:3;Name=ENSG00000236690;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7347380	7466289	.	-	.	source_gene_common_name=TTTY16;source_gene=ENSG00000290323.2;gene_id=CHM13_chrY_G0000127;gene_biotype=lncRNA;gene_name=TTTY16;gene_sources=liftoff;ID=CHM13_chrY_G0000127;Name=TTTY16
CHM13_chrY	CAT	transcript	7347380	7465251	1000	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_G0000127;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=CHM13_chrY_T0000489;Name=TTTY16
CHM13_chrY	CAT	exon	7347380	7347790	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000489:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7347791	7349752	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000489:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7349753	7349947	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000489:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7349948	7351859	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000489:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7351860	7352160	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000489:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7352161	7353859	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000489:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7353860	7353936	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000489:3;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7353937	7363842	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000489:3;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7363843	7363991	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000489:4;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7363992	7365540	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000489:4;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7365541	7365769	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000489:5;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7365770	7432504	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000489:5;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7432505	7432688	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000489:6;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7432689	7465137	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000489:6;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7465138	7465251	.	-	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000489;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000489;transcript_name=CHM13_chrY_T0000489;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000489:7;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7347383	7433211	1000	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_G0000127;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=CHM13_chrY_T0000490;Name=TTTY16
CHM13_chrY	CAT	exon	7347383	7348457	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000490:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7348458	7349752	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000490:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7349753	7349947	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000490:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7349948	7351859	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000490:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7351860	7352160	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000490:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7352161	7353859	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000490:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7353860	7353936	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000490:3;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7353937	7363842	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000490:3;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7363843	7363991	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000490:4;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7363992	7365540	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000490:4;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7365541	7365769	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000490:5;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7365770	7425927	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000490:5;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7425928	7425991	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000490:6;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7425992	7432504	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000490:6;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7432505	7432688	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000490:7;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7432689	7433068	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000490:7;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7433069	7433211	.	-	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000490;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000490;transcript_name=CHM13_chrY_T0000490;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000490:8;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7349233	7459695	1000	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000491;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_G0000127;transcript_name=CHM13_chrY_T0000491;gene_name=TTTY16;ID=CHM13_chrY_T0000491;Name=TTTY16
CHM13_chrY	CAT	exon	7349233	7349947	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000491;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000491;transcript_name=CHM13_chrY_T0000491;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000491:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7349948	7432504	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000491;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000491;transcript_name=CHM13_chrY_T0000491;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000491:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7432505	7432691	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000491;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000491;transcript_name=CHM13_chrY_T0000491;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000491:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7432692	7459581	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000491;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000491;transcript_name=CHM13_chrY_T0000491;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000491:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7459582	7459695	.	-	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000491;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000491;transcript_name=CHM13_chrY_T0000491;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000491:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7357535	7426184	1000	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000492;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_G0000127;transcript_name=CHM13_chrY_T0000492;gene_name=TTTY16;ID=CHM13_chrY_T0000492;Name=TTTY16
CHM13_chrY	CAT	exon	7357535	7357595	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000492;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000492;transcript_name=CHM13_chrY_T0000492;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000492:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7357596	7363842	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000492;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000492;transcript_name=CHM13_chrY_T0000492;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000492:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7363843	7363991	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000492;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000492;transcript_name=CHM13_chrY_T0000492;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000492:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7363992	7365540	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000492;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000492;transcript_name=CHM13_chrY_T0000492;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000492:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7365541	7365769	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000492;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000492;transcript_name=CHM13_chrY_T0000492;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000492:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7365770	7425927	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000492;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000492;transcript_name=CHM13_chrY_T0000492;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000492:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7425928	7426184	.	-	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000492;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000492;transcript_name=CHM13_chrY_T0000492;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000492:3;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7398580	7459905	1000	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000494;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_G0000127;transcript_name=CHM13_chrY_T0000494;gene_name=TTTY16;ID=CHM13_chrY_T0000494;Name=TTTY16
CHM13_chrY	CAT	exon	7398580	7399020	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000494;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000494;transcript_name=CHM13_chrY_T0000494;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000494:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7399021	7432504	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000494;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000494;transcript_name=CHM13_chrY_T0000494;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000494:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7432505	7432691	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000494;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000494;transcript_name=CHM13_chrY_T0000494;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000494:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7432692	7459798	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000494;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000494;transcript_name=CHM13_chrY_T0000494;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000494:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7459799	7459905	.	-	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000494;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000494;transcript_name=CHM13_chrY_T0000494;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000494:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7398580	7465185	1000	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000495;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_G0000127;transcript_name=CHM13_chrY_T0000495;gene_name=TTTY16;ID=CHM13_chrY_T0000495;Name=TTTY16
CHM13_chrY	CAT	exon	7398580	7399020	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000495;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000495;transcript_name=CHM13_chrY_T0000495;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000495:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7399021	7432504	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000495;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000495;transcript_name=CHM13_chrY_T0000495;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000495:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7432505	7432688	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000495;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000495;transcript_name=CHM13_chrY_T0000495;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000495:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7432689	7465137	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000495;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000495;transcript_name=CHM13_chrY_T0000495;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000495:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7465138	7465185	.	-	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000495;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000495;transcript_name=CHM13_chrY_T0000495;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000495:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7398582	7459909	1000	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000496;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_G0000127;transcript_name=CHM13_chrY_T0000496;gene_name=TTTY16;ID=CHM13_chrY_T0000496;Name=TTTY16
CHM13_chrY	CAT	exon	7398582	7399020	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000496;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000496;transcript_name=CHM13_chrY_T0000496;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000496:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7399021	7432504	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000496;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000496;transcript_name=CHM13_chrY_T0000496;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000496:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7432505	7432688	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000496;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000496;transcript_name=CHM13_chrY_T0000496;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000496:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7432689	7459798	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000496;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000496;transcript_name=CHM13_chrY_T0000496;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000496:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7459799	7459909	.	-	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000496;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000496;transcript_name=CHM13_chrY_T0000496;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000496:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7398588	7433225	1000	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000497;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_G0000127;transcript_name=CHM13_chrY_T0000497;gene_name=TTTY16;ID=CHM13_chrY_T0000497;Name=TTTY16
CHM13_chrY	CAT	exon	7398588	7399020	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000497;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000497;transcript_name=CHM13_chrY_T0000497;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000497:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7399021	7432504	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000497;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000497;transcript_name=CHM13_chrY_T0000497;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000497:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7432505	7432688	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000497;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000497;transcript_name=CHM13_chrY_T0000497;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000497:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7432689	7433068	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000497;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000497;transcript_name=CHM13_chrY_T0000497;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000497:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7433069	7433225	.	-	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000497;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000497;transcript_name=CHM13_chrY_T0000497;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000497:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7398588	7459836	1000	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000498;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_G0000127;transcript_name=CHM13_chrY_T0000498;gene_name=TTTY16;ID=CHM13_chrY_T0000498;Name=TTTY16
CHM13_chrY	CAT	exon	7398588	7399020	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000498;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000498;transcript_name=CHM13_chrY_T0000498;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000498:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7399021	7425927	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000498;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000498;transcript_name=CHM13_chrY_T0000498;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000498:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7425928	7425987	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000498;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000498;transcript_name=CHM13_chrY_T0000498;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000498:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7425988	7432504	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000498;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000498;transcript_name=CHM13_chrY_T0000498;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000498:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7432505	7432688	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000498;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000498;transcript_name=CHM13_chrY_T0000498;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000498:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7432689	7459798	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000498;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000498;transcript_name=CHM13_chrY_T0000498;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000498:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7459799	7459836	.	-	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000498;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000498;transcript_name=CHM13_chrY_T0000498;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000498:3;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7398588	7459793	1000	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000499;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_G0000127;transcript_name=CHM13_chrY_T0000499;gene_name=TTTY16;ID=CHM13_chrY_T0000499;Name=TTTY16
CHM13_chrY	CAT	exon	7398588	7399020	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000499;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000499;transcript_name=CHM13_chrY_T0000499;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000499:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7399021	7432504	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000499;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000499;transcript_name=CHM13_chrY_T0000499;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000499:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7432505	7432691	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000499;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000499;transcript_name=CHM13_chrY_T0000499;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000499:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7432692	7459581	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000499;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000499;transcript_name=CHM13_chrY_T0000499;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000499:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7459582	7459793	.	-	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000499;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000499;transcript_name=CHM13_chrY_T0000499;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000499:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7398588	7426241	1000	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000500;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_G0000127;transcript_name=CHM13_chrY_T0000500;gene_name=TTTY16;ID=CHM13_chrY_T0000500;Name=TTTY16
CHM13_chrY	CAT	exon	7398588	7399020	.	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000500;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000500;transcript_name=CHM13_chrY_T0000500;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000500:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7399021	7425927	.	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000500;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000500;transcript_name=CHM13_chrY_T0000500;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000500:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7425928	7426241	.	-	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000500;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000500;transcript_name=CHM13_chrY_T0000500;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000500:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7398588	7465245	1000	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000501;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_G0000127;transcript_name=CHM13_chrY_T0000501;gene_name=TTTY16;ID=CHM13_chrY_T0000501;Name=TTTY16
CHM13_chrY	CAT	exon	7398588	7399020	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000501;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000501;transcript_name=CHM13_chrY_T0000501;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000501:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7399021	7432504	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000501;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000501;transcript_name=CHM13_chrY_T0000501;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000501:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7432505	7432691	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000501;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000501;transcript_name=CHM13_chrY_T0000501;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000501:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7432692	7432817	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000501;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000501;transcript_name=CHM13_chrY_T0000501;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000501:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7432818	7433012	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000501;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000501;transcript_name=CHM13_chrY_T0000501;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000501:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7433013	7461478	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000501;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000501;transcript_name=CHM13_chrY_T0000501;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000501:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7461479	7461588	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000501;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000501;transcript_name=CHM13_chrY_T0000501;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000501:3;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7461589	7465137	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000501;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000501;transcript_name=CHM13_chrY_T0000501;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000501:3;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7465138	7465245	.	-	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000501;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000501;transcript_name=CHM13_chrY_T0000501;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000501:4;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7398592	7466289	1000	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000502;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_G0000127;transcript_name=CHM13_chrY_T0000502;gene_name=TTTY16;ID=CHM13_chrY_T0000502;Name=TTTY16
CHM13_chrY	CAT	exon	7398592	7399020	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000502;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000502;transcript_name=CHM13_chrY_T0000502;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000502:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7399021	7432504	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000502;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000502;transcript_name=CHM13_chrY_T0000502;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000502:0;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7432505	7432688	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000502;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000502;transcript_name=CHM13_chrY_T0000502;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000502:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7432689	7461478	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000502;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000502;transcript_name=CHM13_chrY_T0000502;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000502:1;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7461479	7461588	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000502;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000502;transcript_name=CHM13_chrY_T0000502;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000502:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7461589	7465137	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000502;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000502;transcript_name=CHM13_chrY_T0000502;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000502:2;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7465138	7465226	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000502;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000502;transcript_name=CHM13_chrY_T0000502;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000502:3;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7465227	7465462	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000502;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000502;transcript_name=CHM13_chrY_T0000502;gene_name=TTTY16;ID=intron:CHM13_chrY_T0000502:3;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7465463	7466289	.	-	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=CHM13_chrY_T0000502;gene_id=CHM13_chrY_G0000127;Parent=CHM13_chrY_T0000502;transcript_name=CHM13_chrY_T0000502;gene_name=TTTY16;ID=exon:CHM13_chrY_T0000502:4;Name=TTTY16;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7365657	7432691	.	-	.	source_gene_common_name=RFTN1P1;source_gene=ENSG00000234795.11;gene_id=CHM13_chrY_G0000128;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RFTN1P1;gene_sources=liftoff;ID=CHM13_chrY_G0000128;Name=RFTN1P1
CHM13_chrY	CAT	transcript	7365657	7432691	1000	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=CHM13_chrY_T0000493;gene_id=CHM13_chrY_G0000128;Parent=CHM13_chrY_G0000128;transcript_name=CHM13_chrY_T0000493;gene_name=RFTN1P1;ID=CHM13_chrY_T0000493;Name=RFTN1P1
CHM13_chrY	CAT	exon	7365657	7365769	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=CHM13_chrY_T0000493;gene_id=CHM13_chrY_G0000128;Parent=CHM13_chrY_T0000493;transcript_name=CHM13_chrY_T0000493;gene_name=RFTN1P1;ID=exon:CHM13_chrY_T0000493:0;Name=RFTN1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7365770	7377852	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=CHM13_chrY_T0000493;gene_id=CHM13_chrY_G0000128;Parent=CHM13_chrY_T0000493;transcript_name=CHM13_chrY_T0000493;gene_name=RFTN1P1;ID=intron:CHM13_chrY_T0000493:0;Name=RFTN1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7377853	7378055	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=CHM13_chrY_T0000493;gene_id=CHM13_chrY_G0000128;Parent=CHM13_chrY_T0000493;transcript_name=CHM13_chrY_T0000493;gene_name=RFTN1P1;ID=exon:CHM13_chrY_T0000493:1;Name=RFTN1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7378056	7385453	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=CHM13_chrY_T0000493;gene_id=CHM13_chrY_G0000128;Parent=CHM13_chrY_T0000493;transcript_name=CHM13_chrY_T0000493;gene_name=RFTN1P1;ID=intron:CHM13_chrY_T0000493:1;Name=RFTN1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7385454	7385837	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=CHM13_chrY_T0000493;gene_id=CHM13_chrY_G0000128;Parent=CHM13_chrY_T0000493;transcript_name=CHM13_chrY_T0000493;gene_name=RFTN1P1;ID=exon:CHM13_chrY_T0000493:2;Name=RFTN1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7385838	7405356	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=CHM13_chrY_T0000493;gene_id=CHM13_chrY_G0000128;Parent=CHM13_chrY_T0000493;transcript_name=CHM13_chrY_T0000493;gene_name=RFTN1P1;ID=intron:CHM13_chrY_T0000493:2;Name=RFTN1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7405357	7405465	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=CHM13_chrY_T0000493;gene_id=CHM13_chrY_G0000128;Parent=CHM13_chrY_T0000493;transcript_name=CHM13_chrY_T0000493;gene_name=RFTN1P1;ID=exon:CHM13_chrY_T0000493:3;Name=RFTN1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7405466	7432504	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=CHM13_chrY_T0000493;gene_id=CHM13_chrY_G0000128;Parent=CHM13_chrY_T0000493;transcript_name=CHM13_chrY_T0000493;gene_name=RFTN1P1;ID=intron:CHM13_chrY_T0000493:3;Name=RFTN1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7432505	7432691	.	-	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=CHM13_chrY_T0000493;gene_id=CHM13_chrY_G0000128;Parent=CHM13_chrY_T0000493;transcript_name=CHM13_chrY_T0000493;gene_name=RFTN1P1;ID=exon:CHM13_chrY_T0000493:4;Name=RFTN1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7443319	7447010	.	+	.	source_gene_common_name=ENSG00000298447;source_gene=ENSG00000298447.1;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;gene_id=CHM13_chrY_G0000129;gene_biotype=lncRNA;gene_name=ENSG00000298447;gene_sources=liftoff;ID=CHM13_chrY_G0000129;Name=ENSG00000298447
CHM13_chrY	CAT	transcript	7443319	7447010	1000	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=CHM13_chrY_T0000503;gene_id=CHM13_chrY_G0000129;Parent=CHM13_chrY_G0000129;transcript_name=CHM13_chrY_T0000503;gene_name=ENSG00000298447;ID=CHM13_chrY_T0000503;Name=ENSG00000298447
CHM13_chrY	CAT	exon	7443319	7443613	.	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=CHM13_chrY_T0000503;gene_id=CHM13_chrY_G0000129;Parent=CHM13_chrY_T0000503;transcript_name=CHM13_chrY_T0000503;gene_name=ENSG00000298447;ID=exon:CHM13_chrY_T0000503:0;Name=ENSG00000298447;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7443614	7446263	.	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=CHM13_chrY_T0000503;gene_id=CHM13_chrY_G0000129;Parent=CHM13_chrY_T0000503;transcript_name=CHM13_chrY_T0000503;gene_name=ENSG00000298447;ID=intron:CHM13_chrY_T0000503:0;Name=ENSG00000298447;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7446264	7447010	.	+	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=CHM13_chrY_T0000503;gene_id=CHM13_chrY_G0000129;Parent=CHM13_chrY_T0000503;transcript_name=CHM13_chrY_T0000503;gene_name=ENSG00000298447;ID=exon:CHM13_chrY_T0000503:1;Name=ENSG00000298447;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7459980	7470668	.	+	.	source_gene_common_name=TTTY12;source_gene=ENSG00000237048.5;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;gene_id=CHM13_chrY_G0000130;gene_biotype=lncRNA;gene_name=TTTY12;gene_sources=liftoff;ID=CHM13_chrY_G0000130;Name=TTTY12
CHM13_chrY	CAT	transcript	7459980	7466667	1000	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=CHM13_chrY_T0000504;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_G0000130;transcript_name=CHM13_chrY_T0000504;gene_name=TTTY12;ID=CHM13_chrY_T0000504;Name=TTTY12
CHM13_chrY	CAT	exon	7459980	7460046	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=CHM13_chrY_T0000504;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000504;transcript_name=CHM13_chrY_T0000504;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000504:0;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7460047	7460907	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=CHM13_chrY_T0000504;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000504;transcript_name=CHM13_chrY_T0000504;gene_name=TTTY12;ID=intron:CHM13_chrY_T0000504:0;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7460908	7461063	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=CHM13_chrY_T0000504;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000504;transcript_name=CHM13_chrY_T0000504;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000504:1;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7461064	7465844	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=CHM13_chrY_T0000504;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000504;transcript_name=CHM13_chrY_T0000504;gene_name=TTTY12;ID=intron:CHM13_chrY_T0000504:1;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7465845	7466667	.	+	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=CHM13_chrY_T0000504;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000504;transcript_name=CHM13_chrY_T0000504;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000504:2;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7459985	7466667	1000	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=CHM13_chrY_T0000505;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_G0000130;transcript_name=CHM13_chrY_T0000505;gene_name=TTTY12;ID=CHM13_chrY_T0000505;Name=TTTY12
CHM13_chrY	CAT	exon	7459985	7460046	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=CHM13_chrY_T0000505;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000505;transcript_name=CHM13_chrY_T0000505;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000505:0;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7460047	7460907	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=CHM13_chrY_T0000505;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000505;transcript_name=CHM13_chrY_T0000505;gene_name=TTTY12;ID=intron:CHM13_chrY_T0000505:0;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7460908	7461063	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=CHM13_chrY_T0000505;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000505;transcript_name=CHM13_chrY_T0000505;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000505:1;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7461064	7461527	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=CHM13_chrY_T0000505;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000505;transcript_name=CHM13_chrY_T0000505;gene_name=TTTY12;ID=intron:CHM13_chrY_T0000505:1;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7461528	7461609	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=CHM13_chrY_T0000505;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000505;transcript_name=CHM13_chrY_T0000505;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000505:2;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7461610	7465844	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=CHM13_chrY_T0000505;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000505;transcript_name=CHM13_chrY_T0000505;gene_name=TTTY12;ID=intron:CHM13_chrY_T0000505:2;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7465845	7466667	.	+	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=CHM13_chrY_T0000505;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000505;transcript_name=CHM13_chrY_T0000505;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000505:3;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7459985	7470668	1000	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=CHM13_chrY_T0000506;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_G0000130;transcript_name=CHM13_chrY_T0000506;gene_name=TTTY12;ID=CHM13_chrY_T0000506;Name=TTTY12
CHM13_chrY	CAT	exon	7459985	7460046	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=CHM13_chrY_T0000506;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000506;transcript_name=CHM13_chrY_T0000506;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000506:0;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7460047	7460907	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=CHM13_chrY_T0000506;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000506;transcript_name=CHM13_chrY_T0000506;gene_name=TTTY12;ID=intron:CHM13_chrY_T0000506:0;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7460908	7461063	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=CHM13_chrY_T0000506;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000506;transcript_name=CHM13_chrY_T0000506;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000506:1;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7461064	7470562	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=CHM13_chrY_T0000506;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000506;transcript_name=CHM13_chrY_T0000506;gene_name=TTTY12;ID=intron:CHM13_chrY_T0000506:1;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7470563	7470668	.	+	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=CHM13_chrY_T0000506;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000506;transcript_name=CHM13_chrY_T0000506;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000506:2;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7460906	7466667	1000	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=CHM13_chrY_T0000507;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_G0000130;transcript_name=CHM13_chrY_T0000507;gene_name=TTTY12;ID=CHM13_chrY_T0000507;Name=TTTY12
CHM13_chrY	CAT	exon	7460906	7461063	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=CHM13_chrY_T0000507;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000507;transcript_name=CHM13_chrY_T0000507;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000507:0;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7461064	7461527	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=CHM13_chrY_T0000507;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000507;transcript_name=CHM13_chrY_T0000507;gene_name=TTTY12;ID=intron:CHM13_chrY_T0000507:0;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7461528	7461609	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=CHM13_chrY_T0000507;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000507;transcript_name=CHM13_chrY_T0000507;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000507:1;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7461610	7466515	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=CHM13_chrY_T0000507;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000507;transcript_name=CHM13_chrY_T0000507;gene_name=TTTY12;ID=intron:CHM13_chrY_T0000507:1;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7466516	7466667	.	+	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=CHM13_chrY_T0000507;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000507;transcript_name=CHM13_chrY_T0000507;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000507:2;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7463797	7466667	1000	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=CHM13_chrY_T0000508;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_G0000130;transcript_name=CHM13_chrY_T0000508;gene_name=TTTY12;ID=CHM13_chrY_T0000508;Name=TTTY12
CHM13_chrY	CAT	exon	7463797	7463839	.	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=CHM13_chrY_T0000508;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000508;transcript_name=CHM13_chrY_T0000508;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000508:0;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7463840	7465844	.	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=CHM13_chrY_T0000508;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000508;transcript_name=CHM13_chrY_T0000508;gene_name=TTTY12;ID=intron:CHM13_chrY_T0000508:0;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7465845	7466667	.	+	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=CHM13_chrY_T0000508;gene_id=CHM13_chrY_G0000130;Parent=CHM13_chrY_T0000508;transcript_name=CHM13_chrY_T0000508;gene_name=TTTY12;ID=exon:CHM13_chrY_T0000508:1;Name=TTTY12;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7501469	7502438	.	-	.	source_gene_common_name=ENSG00000278854;source_gene=ENSG00000278854.1;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;gene_id=CHM13_chrY_G0000131;gene_biotype=processed_pseudogene;gene_name=ENSG00000278854;gene_sources=liftoff;ID=CHM13_chrY_G0000131;Name=ENSG00000278854
CHM13_chrY	CAT	transcript	7501469	7502438	1000	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=CHM13_chrY_T0000509;gene_id=CHM13_chrY_G0000131;Parent=CHM13_chrY_G0000131;transcript_name=CHM13_chrY_T0000509;gene_name=ENSG00000278854;ID=CHM13_chrY_T0000509;Name=ENSG00000278854
CHM13_chrY	CAT	exon	7501469	7501865	.	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=CHM13_chrY_T0000509;gene_id=CHM13_chrY_G0000131;Parent=CHM13_chrY_T0000509;transcript_name=CHM13_chrY_T0000509;gene_name=ENSG00000278854;ID=exon:CHM13_chrY_T0000509:0;Name=ENSG00000278854;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7501866	7502164	.	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=CHM13_chrY_T0000509;gene_id=CHM13_chrY_G0000131;Parent=CHM13_chrY_T0000509;transcript_name=CHM13_chrY_T0000509;gene_name=ENSG00000278854;ID=intron:CHM13_chrY_T0000509:0;Name=ENSG00000278854;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7502165	7502438	.	-	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=CHM13_chrY_T0000509;gene_id=CHM13_chrY_G0000131;Parent=CHM13_chrY_T0000509;transcript_name=CHM13_chrY_T0000509;gene_name=ENSG00000278854;ID=exon:CHM13_chrY_T0000509:1;Name=ENSG00000278854;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7509668	7510858	.	-	.	source_gene_common_name=ZNF92P1Y;source_gene=ENSG00000215603.4;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;gene_id=CHM13_chrY_G0000132;gene_biotype=processed_pseudogene;gene_name=ZNF92P1Y;gene_sources=liftoff;ID=CHM13_chrY_G0000132;Name=ZNF92P1Y
CHM13_chrY	CAT	transcript	7509668	7510858	1000	-	.	source_transcript=ENST00000415010.1;source_transcript_name=ZNF92P1Y-201;source_gene=ENSG00000215603.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215603.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415010.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF92P1Y;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;transcript_id=CHM13_chrY_T0000510;gene_id=CHM13_chrY_G0000132;Parent=CHM13_chrY_G0000132;transcript_name=CHM13_chrY_T0000510;gene_name=ZNF92P1Y;ID=CHM13_chrY_T0000510;Name=ZNF92P1Y
CHM13_chrY	CAT	exon	7509668	7510858	.	-	.	source_transcript=ENST00000415010.1;source_transcript_name=ZNF92P1Y-201;source_gene=ENSG00000215603.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215603.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415010.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF92P1Y;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;transcript_id=CHM13_chrY_T0000510;gene_id=CHM13_chrY_G0000132;Parent=CHM13_chrY_T0000510;transcript_name=CHM13_chrY_T0000510;gene_name=ZNF92P1Y;ID=exon:CHM13_chrY_T0000510:0;Name=ZNF92P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7561522	7563289	.	-	.	source_gene_common_name=ENSG00000273863;source_gene=ENSG00000273863.1;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;gene_id=CHM13_chrY_G0000133;gene_biotype=processed_pseudogene;gene_name=ENSG00000273863;gene_sources=liftoff;ID=CHM13_chrY_G0000133;Name=ENSG00000273863
CHM13_chrY	CAT	transcript	7561522	7563289	1000	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=CHM13_chrY_T0000511;gene_id=CHM13_chrY_G0000133;Parent=CHM13_chrY_G0000133;transcript_name=CHM13_chrY_T0000511;gene_name=ENSG00000273863;ID=CHM13_chrY_T0000511;Name=ENSG00000273863
CHM13_chrY	CAT	exon	7561522	7562044	.	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=CHM13_chrY_T0000511;gene_id=CHM13_chrY_G0000133;Parent=CHM13_chrY_T0000511;transcript_name=CHM13_chrY_T0000511;gene_name=ENSG00000273863;ID=exon:CHM13_chrY_T0000511:0;Name=ENSG00000273863;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7562045	7563099	.	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=CHM13_chrY_T0000511;gene_id=CHM13_chrY_G0000133;Parent=CHM13_chrY_T0000511;transcript_name=CHM13_chrY_T0000511;gene_name=ENSG00000273863;ID=intron:CHM13_chrY_T0000511:0;Name=ENSG00000273863;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7563100	7563289	.	-	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=CHM13_chrY_T0000511;gene_id=CHM13_chrY_G0000133;Parent=CHM13_chrY_T0000511;transcript_name=CHM13_chrY_T0000511;gene_name=ENSG00000273863;ID=exon:CHM13_chrY_T0000511:1;Name=ENSG00000273863;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7569408	7570076	.	-	.	source_gene_common_name=ZNF736P8Y;source_gene=ENSG00000244246.1;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;gene_id=CHM13_chrY_G0000134;gene_biotype=processed_pseudogene;gene_name=ZNF736P8Y;gene_sources=liftoff;ID=CHM13_chrY_G0000134;Name=ZNF736P8Y
CHM13_chrY	CAT	transcript	7569408	7570076	1000	-	.	source_transcript=ENST00000451913.1;source_transcript_name=ZNF736P8Y-201;source_gene=ENSG00000244246.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244246.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451913.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P8Y;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;transcript_id=CHM13_chrY_T0000512;gene_id=CHM13_chrY_G0000134;Parent=CHM13_chrY_G0000134;transcript_name=CHM13_chrY_T0000512;gene_name=ZNF736P8Y;ID=CHM13_chrY_T0000512;Name=ZNF736P8Y
CHM13_chrY	CAT	exon	7569408	7570076	.	-	.	source_transcript=ENST00000451913.1;source_transcript_name=ZNF736P8Y-201;source_gene=ENSG00000244246.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244246.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P8Y;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;transcript_id=CHM13_chrY_T0000512;gene_id=CHM13_chrY_G0000134;Parent=CHM13_chrY_T0000512;transcript_name=CHM13_chrY_T0000512;gene_name=ZNF736P8Y;ID=exon:CHM13_chrY_T0000512:0;Name=ZNF736P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7588983	7593626	.	-	.	source_gene_common_name=BPY2DP;source_gene=ENSG00000229745.1;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;gene_id=CHM13_chrY_G0000135;gene_biotype=unprocessed_pseudogene;gene_name=BPY2DP;gene_sources=liftoff;ID=CHM13_chrY_G0000135;Name=BPY2DP
CHM13_chrY	CAT	transcript	7588983	7593626	1000	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=CHM13_chrY_T0000513;gene_id=CHM13_chrY_G0000135;Parent=CHM13_chrY_G0000135;transcript_name=CHM13_chrY_T0000513;gene_name=BPY2DP;ID=CHM13_chrY_T0000513;Name=BPY2DP
CHM13_chrY	CAT	exon	7588983	7589001	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=CHM13_chrY_T0000513;gene_id=CHM13_chrY_G0000135;Parent=CHM13_chrY_T0000513;transcript_name=CHM13_chrY_T0000513;gene_name=BPY2DP;ID=exon:CHM13_chrY_T0000513:0;Name=BPY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7589002	7589679	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=CHM13_chrY_T0000513;gene_id=CHM13_chrY_G0000135;Parent=CHM13_chrY_T0000513;transcript_name=CHM13_chrY_T0000513;gene_name=BPY2DP;ID=intron:CHM13_chrY_T0000513:0;Name=BPY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7589680	7589785	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=CHM13_chrY_T0000513;gene_id=CHM13_chrY_G0000135;Parent=CHM13_chrY_T0000513;transcript_name=CHM13_chrY_T0000513;gene_name=BPY2DP;ID=exon:CHM13_chrY_T0000513:1;Name=BPY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7589786	7592620	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=CHM13_chrY_T0000513;gene_id=CHM13_chrY_G0000135;Parent=CHM13_chrY_T0000513;transcript_name=CHM13_chrY_T0000513;gene_name=BPY2DP;ID=intron:CHM13_chrY_T0000513:1;Name=BPY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7592621	7592690	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=CHM13_chrY_T0000513;gene_id=CHM13_chrY_G0000135;Parent=CHM13_chrY_T0000513;transcript_name=CHM13_chrY_T0000513;gene_name=BPY2DP;ID=exon:CHM13_chrY_T0000513:2;Name=BPY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7592691	7593556	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=CHM13_chrY_T0000513;gene_id=CHM13_chrY_G0000135;Parent=CHM13_chrY_T0000513;transcript_name=CHM13_chrY_T0000513;gene_name=BPY2DP;ID=intron:CHM13_chrY_T0000513:2;Name=BPY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7593557	7593626	.	-	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=CHM13_chrY_T0000513;gene_id=CHM13_chrY_G0000135;Parent=CHM13_chrY_T0000513;transcript_name=CHM13_chrY_T0000513;gene_name=BPY2DP;ID=exon:CHM13_chrY_T0000513:3;Name=BPY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7646981	7647800	.	-	.	source_gene_common_name=ZNF736P7Y;source_gene=ENSG00000241200.1;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;gene_id=CHM13_chrY_G0000136;gene_biotype=processed_pseudogene;gene_name=ZNF736P7Y;gene_sources=liftoff;ID=CHM13_chrY_G0000136;Name=ZNF736P7Y
CHM13_chrY	CAT	transcript	7646981	7647800	1000	-	.	source_transcript=ENST00000425158.1;source_transcript_name=ZNF736P7Y-201;source_gene=ENSG00000241200.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000241200.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425158.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P7Y;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;transcript_id=CHM13_chrY_T0000514;gene_id=CHM13_chrY_G0000136;Parent=CHM13_chrY_G0000136;transcript_name=CHM13_chrY_T0000514;gene_name=ZNF736P7Y;ID=CHM13_chrY_T0000514;Name=ZNF736P7Y
CHM13_chrY	CAT	exon	7646981	7647800	.	-	.	source_transcript=ENST00000425158.1;source_transcript_name=ZNF736P7Y-201;source_gene=ENSG00000241200.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000241200.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P7Y;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;transcript_id=CHM13_chrY_T0000514;gene_id=CHM13_chrY_G0000136;Parent=CHM13_chrY_T0000514;transcript_name=CHM13_chrY_T0000514;gene_name=ZNF736P7Y;ID=exon:CHM13_chrY_T0000514:0;Name=ZNF736P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7724444	7782294	.	-	.	source_gene_common_name=ENSG00000293305;source_gene=ENSG00000293305.2;gene_id=CHM13_chrY_G0000137;gene_biotype=lncRNA;gene_name=ENSG00000293305;gene_sources=liftoff;ID=CHM13_chrY_G0000137;Name=ENSG00000293305
CHM13_chrY	CAT	transcript	7724444	7782294	1000	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000515;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_G0000137;transcript_name=CHM13_chrY_T0000515;gene_name=ENSG00000293305;ID=CHM13_chrY_T0000515;Name=ENSG00000293305
CHM13_chrY	CAT	exon	7724444	7726116	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000515;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000515;transcript_name=CHM13_chrY_T0000515;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000515:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7726117	7732990	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000515;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000515;transcript_name=CHM13_chrY_T0000515;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000515:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7732991	7733175	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000515;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000515;transcript_name=CHM13_chrY_T0000515;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000515:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7733176	7767850	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000515;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000515;transcript_name=CHM13_chrY_T0000515;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000515:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7767851	7767965	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000515;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000515;transcript_name=CHM13_chrY_T0000515;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000515:2;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7767966	7782084	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000515;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000515;transcript_name=CHM13_chrY_T0000515;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000515:2;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7782085	7782294	.	-	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000515;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000515;transcript_name=CHM13_chrY_T0000515;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000515:3;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7725871	7782293	1000	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000517;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_G0000137;transcript_name=CHM13_chrY_T0000517;gene_name=ENSG00000293305;ID=CHM13_chrY_T0000517;Name=ENSG00000293305
CHM13_chrY	CAT	exon	7725871	7726116	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000517;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000517;transcript_name=CHM13_chrY_T0000517;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000517:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7726117	7767850	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000517;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000517;transcript_name=CHM13_chrY_T0000517;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000517:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7767851	7767965	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000517;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000517;transcript_name=CHM13_chrY_T0000517;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000517:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7767966	7782058	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000517;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000517;transcript_name=CHM13_chrY_T0000517;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000517:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7782059	7782293	.	-	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000517;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000517;transcript_name=CHM13_chrY_T0000517;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000517:2;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7725876	7782335	1000	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000518;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_G0000137;transcript_name=CHM13_chrY_T0000518;gene_name=ENSG00000293305;ID=CHM13_chrY_T0000518;Name=ENSG00000293305
CHM13_chrY	CAT	exon	7725876	7726116	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000518;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000518;transcript_name=CHM13_chrY_T0000518;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000518:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7726117	7732990	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000518;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000518;transcript_name=CHM13_chrY_T0000518;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000518:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7732991	7733175	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000518;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000518;transcript_name=CHM13_chrY_T0000518;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000518:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7733176	7767850	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000518;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000518;transcript_name=CHM13_chrY_T0000518;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000518:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7767851	7767965	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000518;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000518;transcript_name=CHM13_chrY_T0000518;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000518:2;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7767966	7782058	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000518;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000518;transcript_name=CHM13_chrY_T0000518;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000518:2;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7782059	7782335	.	-	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000518;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000518;transcript_name=CHM13_chrY_T0000518;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000518:3;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7725876	7782282	1000	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000519;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_G0000137;transcript_name=CHM13_chrY_T0000519;gene_name=ENSG00000293305;ID=CHM13_chrY_T0000519;Name=ENSG00000293305
CHM13_chrY	CAT	exon	7725876	7726116	.	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000519;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000519;transcript_name=CHM13_chrY_T0000519;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000519:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7726117	7782058	.	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000519;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000519;transcript_name=CHM13_chrY_T0000519;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000519:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7782059	7782282	.	-	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000519;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000519;transcript_name=CHM13_chrY_T0000519;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000519:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7725876	7782244	1000	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000520;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_G0000137;transcript_name=CHM13_chrY_T0000520;gene_name=ENSG00000293305;ID=CHM13_chrY_T0000520;Name=ENSG00000293305
CHM13_chrY	CAT	exon	7725876	7726116	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000520;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000520;transcript_name=CHM13_chrY_T0000520;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000520:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7726117	7732990	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000520;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000520;transcript_name=CHM13_chrY_T0000520;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000520:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7732991	7733175	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000520;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000520;transcript_name=CHM13_chrY_T0000520;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000520:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7733176	7782058	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000520;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000520;transcript_name=CHM13_chrY_T0000520;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000520:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7782059	7782244	.	-	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000520;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000520;transcript_name=CHM13_chrY_T0000520;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000520:2;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7725876	7748072	1000	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000521;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_G0000137;transcript_name=CHM13_chrY_T0000521;gene_name=ENSG00000293305;ID=CHM13_chrY_T0000521;Name=ENSG00000293305
CHM13_chrY	CAT	exon	7725876	7726116	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000521;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000521;transcript_name=CHM13_chrY_T0000521;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000521:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7726117	7733052	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000521;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000521;transcript_name=CHM13_chrY_T0000521;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000521:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7733053	7733175	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000521;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000521;transcript_name=CHM13_chrY_T0000521;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000521:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7733176	7748033	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000521;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000521;transcript_name=CHM13_chrY_T0000521;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000521:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7748034	7748072	.	-	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000521;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000521;transcript_name=CHM13_chrY_T0000521;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000521:2;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7725879	7748070	1000	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000522;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_G0000137;transcript_name=CHM13_chrY_T0000522;gene_name=ENSG00000293305;ID=CHM13_chrY_T0000522;Name=ENSG00000293305
CHM13_chrY	CAT	exon	7725879	7726116	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000522;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000522;transcript_name=CHM13_chrY_T0000522;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000522:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7726117	7732990	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000522;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000522;transcript_name=CHM13_chrY_T0000522;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000522:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7732991	7733175	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000522;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000522;transcript_name=CHM13_chrY_T0000522;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000522:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7733176	7748033	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000522;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000522;transcript_name=CHM13_chrY_T0000522;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000522:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7748034	7748070	.	-	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000522;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000522;transcript_name=CHM13_chrY_T0000522;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000522:2;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7725880	7748126	1000	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000523;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_G0000137;transcript_name=CHM13_chrY_T0000523;gene_name=ENSG00000293305;ID=CHM13_chrY_T0000523;Name=ENSG00000293305
CHM13_chrY	CAT	exon	7725880	7726116	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000523;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000523;transcript_name=CHM13_chrY_T0000523;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000523:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7726117	7732990	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000523;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000523;transcript_name=CHM13_chrY_T0000523;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000523:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7732991	7733175	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000523;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000523;transcript_name=CHM13_chrY_T0000523;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000523:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7733176	7747598	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000523;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000523;transcript_name=CHM13_chrY_T0000523;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000523:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7747599	7747749	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000523;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000523;transcript_name=CHM13_chrY_T0000523;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000523:2;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7747750	7748033	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000523;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000523;transcript_name=CHM13_chrY_T0000523;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000523:2;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7748034	7748126	.	-	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000523;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000523;transcript_name=CHM13_chrY_T0000523;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000523:3;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7725880	7782244	1000	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000524;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_G0000137;transcript_name=CHM13_chrY_T0000524;gene_name=ENSG00000293305;ID=CHM13_chrY_T0000524;Name=ENSG00000293305
CHM13_chrY	CAT	exon	7725880	7726116	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000524;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000524;transcript_name=CHM13_chrY_T0000524;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000524:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7726117	7733052	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000524;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000524;transcript_name=CHM13_chrY_T0000524;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000524:0;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7733053	7733175	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000524;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000524;transcript_name=CHM13_chrY_T0000524;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000524:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7733176	7782058	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000524;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000524;transcript_name=CHM13_chrY_T0000524;gene_name=ENSG00000293305;ID=intron:CHM13_chrY_T0000524:1;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7782059	7782244	.	-	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=CHM13_chrY_T0000524;gene_id=CHM13_chrY_G0000137;Parent=CHM13_chrY_T0000524;transcript_name=CHM13_chrY_T0000524;gene_name=ENSG00000293305;ID=exon:CHM13_chrY_T0000524:2;Name=ENSG00000293305;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7724895	7726722	.	-	.	source_gene_common_name=ZNF736P9Y;source_gene=ENSG00000239893.4;gene_id=CHM13_chrY_G0000138;gene_biotype=transcribed_processed_pseudogene;gene_name=ZNF736P9Y;gene_sources=liftoff;ID=CHM13_chrY_G0000138;Name=ZNF736P9Y
CHM13_chrY	CAT	transcript	7724895	7726722	1000	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=CHM13_chrY_T0000516;gene_id=CHM13_chrY_G0000138;Parent=CHM13_chrY_G0000138;transcript_name=CHM13_chrY_T0000516;gene_name=ZNF736P9Y;ID=CHM13_chrY_T0000516;Name=ZNF736P9Y
CHM13_chrY	CAT	exon	7724895	7726117	.	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=CHM13_chrY_T0000516;gene_id=CHM13_chrY_G0000138;Parent=CHM13_chrY_T0000516;transcript_name=CHM13_chrY_T0000516;gene_name=ZNF736P9Y;ID=exon:CHM13_chrY_T0000516:0;Name=ZNF736P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7726118	7726600	.	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=CHM13_chrY_T0000516;gene_id=CHM13_chrY_G0000138;Parent=CHM13_chrY_T0000516;transcript_name=CHM13_chrY_T0000516;gene_name=ZNF736P9Y;ID=intron:CHM13_chrY_T0000516:0;Name=ZNF736P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7726601	7726722	.	-	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=CHM13_chrY_T0000516;gene_id=CHM13_chrY_G0000138;Parent=CHM13_chrY_T0000516;transcript_name=CHM13_chrY_T0000516;gene_name=ZNF736P9Y;ID=exon:CHM13_chrY_T0000516:1;Name=ZNF736P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7783131	7800204	.	+	.	source_gene_common_name=RBMY2JP;source_gene=ENSG00000227204.1;gene_id=CHM13_chrY_G0000139;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2JP;gene_sources=liftoff;ID=CHM13_chrY_G0000139;Name=RBMY2JP
CHM13_chrY	CAT	transcript	7783131	7800204	1000	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_G0000139;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=CHM13_chrY_T0000525;Name=RBMY2JP
CHM13_chrY	CAT	exon	7783131	7783239	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=exon:CHM13_chrY_T0000525:0;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7783240	7785233	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=intron:CHM13_chrY_T0000525:0;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7785234	7785236	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=exon:CHM13_chrY_T0000525:1;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7785237	7787648	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=intron:CHM13_chrY_T0000525:1;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7787649	7787826	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=exon:CHM13_chrY_T0000525:2;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7787827	7789685	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=intron:CHM13_chrY_T0000525:2;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7789686	7789801	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=exon:CHM13_chrY_T0000525:3;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7789802	7790126	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=intron:CHM13_chrY_T0000525:3;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7790127	7790163	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=exon:CHM13_chrY_T0000525:4;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7790164	7798226	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=intron:CHM13_chrY_T0000525:4;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7798227	7798339	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=exon:CHM13_chrY_T0000525:5;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7798340	7799208	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=intron:CHM13_chrY_T0000525:5;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7799209	7799315	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=exon:CHM13_chrY_T0000525:6;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7799316	7799394	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=intron:CHM13_chrY_T0000525:6;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7799395	7799488	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=exon:CHM13_chrY_T0000525:7;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7799489	7799902	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=intron:CHM13_chrY_T0000525:7;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7799903	7800204	.	+	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=CHM13_chrY_T0000525;gene_id=CHM13_chrY_G0000139;Parent=CHM13_chrY_T0000525;transcript_name=CHM13_chrY_T0000525;gene_name=RBMY2JP;ID=exon:CHM13_chrY_T0000525:8;Name=RBMY2JP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7784440	7799715	.	+	.	source_gene_common_name=ENSG00000299821;source_gene=ENSG00000299821.1;gene_id=CHM13_chrY_G0000140;gene_biotype=lncRNA;gene_name=ENSG00000299821;gene_sources=liftoff;ID=CHM13_chrY_G0000140;Name=ENSG00000299821
CHM13_chrY	CAT	transcript	7784440	7799715	1000	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=CHM13_chrY_T0000526;gene_id=CHM13_chrY_G0000140;Parent=CHM13_chrY_G0000140;transcript_name=CHM13_chrY_T0000526;gene_name=ENSG00000299821;ID=CHM13_chrY_T0000526;Name=ENSG00000299821
CHM13_chrY	CAT	exon	7784440	7785089	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=CHM13_chrY_T0000526;gene_id=CHM13_chrY_G0000140;Parent=CHM13_chrY_T0000526;transcript_name=CHM13_chrY_T0000526;gene_name=ENSG00000299821;ID=exon:CHM13_chrY_T0000526:0;Name=ENSG00000299821;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7785090	7796800	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=CHM13_chrY_T0000526;gene_id=CHM13_chrY_G0000140;Parent=CHM13_chrY_T0000526;transcript_name=CHM13_chrY_T0000526;gene_name=ENSG00000299821;ID=intron:CHM13_chrY_T0000526:0;Name=ENSG00000299821;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7796801	7796961	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=CHM13_chrY_T0000526;gene_id=CHM13_chrY_G0000140;Parent=CHM13_chrY_T0000526;transcript_name=CHM13_chrY_T0000526;gene_name=ENSG00000299821;ID=exon:CHM13_chrY_T0000526:1;Name=ENSG00000299821;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7796962	7799399	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=CHM13_chrY_T0000526;gene_id=CHM13_chrY_G0000140;Parent=CHM13_chrY_T0000526;transcript_name=CHM13_chrY_T0000526;gene_name=ENSG00000299821;ID=intron:CHM13_chrY_T0000526:1;Name=ENSG00000299821;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7799400	7799715	.	+	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=CHM13_chrY_T0000526;gene_id=CHM13_chrY_G0000140;Parent=CHM13_chrY_T0000526;transcript_name=CHM13_chrY_T0000526;gene_name=ENSG00000299821;ID=exon:CHM13_chrY_T0000526:2;Name=ENSG00000299821;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7798182	7807661	.	-	.	source_gene_common_name=ENSG00000299844;source_gene=ENSG00000299844.1;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;gene_id=CHM13_chrY_G0000141;gene_biotype=lncRNA;gene_name=ENSG00000299844;gene_sources=liftoff;ID=CHM13_chrY_G0000141;Name=ENSG00000299844
CHM13_chrY	CAT	transcript	7798182	7807661	1000	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=CHM13_chrY_T0000527;gene_id=CHM13_chrY_G0000141;Parent=CHM13_chrY_G0000141;transcript_name=CHM13_chrY_T0000527;gene_name=ENSG00000299844;ID=CHM13_chrY_T0000527;Name=ENSG00000299844
CHM13_chrY	CAT	exon	7798182	7798329	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=CHM13_chrY_T0000527;gene_id=CHM13_chrY_G0000141;Parent=CHM13_chrY_T0000527;transcript_name=CHM13_chrY_T0000527;gene_name=ENSG00000299844;ID=exon:CHM13_chrY_T0000527:0;Name=ENSG00000299844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7798330	7800229	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=CHM13_chrY_T0000527;gene_id=CHM13_chrY_G0000141;Parent=CHM13_chrY_T0000527;transcript_name=CHM13_chrY_T0000527;gene_name=ENSG00000299844;ID=intron:CHM13_chrY_T0000527:0;Name=ENSG00000299844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7800230	7800337	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=CHM13_chrY_T0000527;gene_id=CHM13_chrY_G0000141;Parent=CHM13_chrY_T0000527;transcript_name=CHM13_chrY_T0000527;gene_name=ENSG00000299844;ID=exon:CHM13_chrY_T0000527:1;Name=ENSG00000299844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7800338	7807596	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=CHM13_chrY_T0000527;gene_id=CHM13_chrY_G0000141;Parent=CHM13_chrY_T0000527;transcript_name=CHM13_chrY_T0000527;gene_name=ENSG00000299844;ID=intron:CHM13_chrY_T0000527:1;Name=ENSG00000299844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7807597	7807661	.	-	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=CHM13_chrY_T0000527;gene_id=CHM13_chrY_G0000141;Parent=CHM13_chrY_T0000527;transcript_name=CHM13_chrY_T0000527;gene_name=ENSG00000299844;ID=exon:CHM13_chrY_T0000527:2;Name=ENSG00000299844;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7920408	7933143	.	-	.	source_gene_common_name=RBMY2KP;source_gene=ENSG00000225809.1;alternative_source_transcripts=ENST00000418221.1;gene_id=CHM13_chrY_G0000142;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2KP;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000142;Name=RBMY2KP
CHM13_chrY	CAT	transcript	7920408	7933143	1000	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=CHM13_chrY_T0000528;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_G0000142;transcript_name=CHM13_chrY_T0000528;gene_name=RBMY2KP;ID=CHM13_chrY_T0000528;Name=RBMY2KP
CHM13_chrY	CAT	exon	7920408	7920724	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=CHM13_chrY_T0000528;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000528;transcript_name=CHM13_chrY_T0000528;gene_name=RBMY2KP;ID=exon:CHM13_chrY_T0000528:0;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7920725	7921133	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=CHM13_chrY_T0000528;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000528;transcript_name=CHM13_chrY_T0000528;gene_name=RBMY2KP;ID=intron:CHM13_chrY_T0000528:0;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7921134	7921403	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=CHM13_chrY_T0000528;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000528;transcript_name=CHM13_chrY_T0000528;gene_name=RBMY2KP;ID=exon:CHM13_chrY_T0000528:1;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7921404	7922273	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=CHM13_chrY_T0000528;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000528;transcript_name=CHM13_chrY_T0000528;gene_name=RBMY2KP;ID=intron:CHM13_chrY_T0000528:1;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7922274	7922388	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=CHM13_chrY_T0000528;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000528;transcript_name=CHM13_chrY_T0000528;gene_name=RBMY2KP;ID=exon:CHM13_chrY_T0000528:2;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7922389	7927238	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=CHM13_chrY_T0000528;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000528;transcript_name=CHM13_chrY_T0000528;gene_name=RBMY2KP;ID=intron:CHM13_chrY_T0000528:2;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7927239	7927388	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=CHM13_chrY_T0000528;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000528;transcript_name=CHM13_chrY_T0000528;gene_name=RBMY2KP;ID=exon:CHM13_chrY_T0000528:3;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7927389	7932508	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=CHM13_chrY_T0000528;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000528;transcript_name=CHM13_chrY_T0000528;gene_name=RBMY2KP;ID=intron:CHM13_chrY_T0000528:3;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7932509	7932611	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=CHM13_chrY_T0000528;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000528;transcript_name=CHM13_chrY_T0000528;gene_name=RBMY2KP;ID=exon:CHM13_chrY_T0000528:4;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7932612	7933035	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=CHM13_chrY_T0000528;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000528;transcript_name=CHM13_chrY_T0000528;gene_name=RBMY2KP;ID=intron:CHM13_chrY_T0000528:4;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7933036	7933143	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=CHM13_chrY_T0000528;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000528;transcript_name=CHM13_chrY_T0000528;gene_name=RBMY2KP;ID=exon:CHM13_chrY_T0000528:5;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	7920408	7933143	1000	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_G0000142;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=CHM13_chrY_T0000529;Name=RBMY2KP
CHM13_chrY	CAT	exon	7920408	7920724	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000529;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=exon:CHM13_chrY_T0000529:0;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7920725	7921133	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000529;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=intron:CHM13_chrY_T0000529:0;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7921134	7921221	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000529;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=exon:CHM13_chrY_T0000529:1;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7921222	7921292	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000529;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=intron:CHM13_chrY_T0000529:1;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7921293	7921403	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000529;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=exon:CHM13_chrY_T0000529:2;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7921404	7922273	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000529;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=intron:CHM13_chrY_T0000529:2;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7922274	7922388	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000529;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=exon:CHM13_chrY_T0000529:3;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7922389	7927238	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000529;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=intron:CHM13_chrY_T0000529:3;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7927239	7927388	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000529;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=exon:CHM13_chrY_T0000529:4;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7927389	7932508	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000529;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=intron:CHM13_chrY_T0000529:4;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7932509	7932611	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000529;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=exon:CHM13_chrY_T0000529:5;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7932612	7933035	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000529;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=intron:CHM13_chrY_T0000529:5;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7933036	7933143	.	-	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=CHM13_chrY_T0000529;gene_id=CHM13_chrY_G0000142;Parent=CHM13_chrY_T0000529;transcript_name=CHM13_chrY_T0000529;gene_name=RBMY2KP;ID=exon:CHM13_chrY_T0000529:6;Name=RBMY2KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	7936153	7938164	.	+	.	source_gene_common_name=TSPY24P;source_gene=ENSG00000215601.3;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;gene_id=CHM13_chrY_G0000143;gene_biotype=unprocessed_pseudogene;gene_name=TSPY24P;gene_sources=liftoff;ID=CHM13_chrY_G0000143;Name=TSPY24P
CHM13_chrY	CAT	transcript	7936153	7938164	1000	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=CHM13_chrY_T0000530;gene_id=CHM13_chrY_G0000143;Parent=CHM13_chrY_G0000143;transcript_name=CHM13_chrY_T0000530;gene_name=TSPY24P;ID=CHM13_chrY_T0000530;Name=TSPY24P
CHM13_chrY	CAT	exon	7936153	7936290	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=CHM13_chrY_T0000530;gene_id=CHM13_chrY_G0000143;Parent=CHM13_chrY_T0000530;transcript_name=CHM13_chrY_T0000530;gene_name=TSPY24P;ID=exon:CHM13_chrY_T0000530:0;Name=TSPY24P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7936291	7937655	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=CHM13_chrY_T0000530;gene_id=CHM13_chrY_G0000143;Parent=CHM13_chrY_T0000530;transcript_name=CHM13_chrY_T0000530;gene_name=TSPY24P;ID=intron:CHM13_chrY_T0000530:0;Name=TSPY24P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7937656	7937765	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=CHM13_chrY_T0000530;gene_id=CHM13_chrY_G0000143;Parent=CHM13_chrY_T0000530;transcript_name=CHM13_chrY_T0000530;gene_name=TSPY24P;ID=exon:CHM13_chrY_T0000530:1;Name=TSPY24P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7937766	7937851	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=CHM13_chrY_T0000530;gene_id=CHM13_chrY_G0000143;Parent=CHM13_chrY_T0000530;transcript_name=CHM13_chrY_T0000530;gene_name=TSPY24P;ID=intron:CHM13_chrY_T0000530:1;Name=TSPY24P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7937852	7937997	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=CHM13_chrY_T0000530;gene_id=CHM13_chrY_G0000143;Parent=CHM13_chrY_T0000530;transcript_name=CHM13_chrY_T0000530;gene_name=TSPY24P;ID=exon:CHM13_chrY_T0000530:2;Name=TSPY24P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	7937998	7938115	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=CHM13_chrY_T0000530;gene_id=CHM13_chrY_G0000143;Parent=CHM13_chrY_T0000530;transcript_name=CHM13_chrY_T0000530;gene_name=TSPY24P;ID=intron:CHM13_chrY_T0000530:2;Name=TSPY24P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	7938116	7938164	.	+	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=CHM13_chrY_T0000530;gene_id=CHM13_chrY_G0000143;Parent=CHM13_chrY_T0000530;transcript_name=CHM13_chrY_T0000530;gene_name=TSPY24P;ID=exon:CHM13_chrY_T0000530:3;Name=TSPY24P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8006865	8008077	.	+	.	source_gene_common_name=ZNF736P6Y;source_gene=ENSG00000224634.1;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;gene_id=CHM13_chrY_G0000144;gene_biotype=processed_pseudogene;gene_name=ZNF736P6Y;gene_sources=liftoff;ID=CHM13_chrY_G0000144;Name=ZNF736P6Y
CHM13_chrY	CAT	transcript	8006865	8008077	1000	+	.	source_transcript=ENST00000447526.1;source_transcript_name=ZNF736P6Y-201;source_gene=ENSG00000224634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447526.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P6Y;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;transcript_id=CHM13_chrY_T0000531;gene_id=CHM13_chrY_G0000144;Parent=CHM13_chrY_G0000144;transcript_name=CHM13_chrY_T0000531;gene_name=ZNF736P6Y;ID=CHM13_chrY_T0000531;Name=ZNF736P6Y
CHM13_chrY	CAT	exon	8006865	8008077	.	+	.	source_transcript=ENST00000447526.1;source_transcript_name=ZNF736P6Y-201;source_gene=ENSG00000224634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P6Y;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;transcript_id=CHM13_chrY_T0000531;gene_id=CHM13_chrY_G0000144;Parent=CHM13_chrY_T0000531;transcript_name=CHM13_chrY_T0000531;gene_name=ZNF736P6Y;ID=exon:CHM13_chrY_T0000531:0;Name=ZNF736P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8019469	8019892	.	-	.	source_gene_common_name=MTND6P1;source_gene=ENSG00000223955.1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;gene_id=CHM13_chrY_G0000145;gene_biotype=processed_pseudogene;gene_name=MTND6P1;gene_sources=liftoff;ID=CHM13_chrY_G0000145;Name=MTND6P1
CHM13_chrY	CAT	transcript	8019469	8019892	1000	-	.	source_transcript=ENST00000417434.1;source_transcript_name=MTND6P1-201;source_gene=ENSG00000223955.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223955.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417434.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND6P1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;transcript_id=CHM13_chrY_T0000532;gene_id=CHM13_chrY_G0000145;Parent=CHM13_chrY_G0000145;transcript_name=CHM13_chrY_T0000532;gene_name=MTND6P1;ID=CHM13_chrY_T0000532;Name=MTND6P1
CHM13_chrY	CAT	exon	8019469	8019892	.	-	.	source_transcript=ENST00000417434.1;source_transcript_name=MTND6P1-201;source_gene=ENSG00000223955.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223955.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417434.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND6P1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;transcript_id=CHM13_chrY_T0000532;gene_id=CHM13_chrY_G0000145;Parent=CHM13_chrY_T0000532;transcript_name=CHM13_chrY_T0000532;gene_name=MTND6P1;ID=exon:CHM13_chrY_T0000532:0;Name=MTND6P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8019965	8021075	.	+	.	source_gene_common_name=MTCYBP1;source_gene=ENSG00000234179.1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;gene_id=CHM13_chrY_G0000146;gene_biotype=processed_pseudogene;gene_name=MTCYBP1;gene_sources=liftoff;ID=CHM13_chrY_G0000146;Name=MTCYBP1
CHM13_chrY	CAT	transcript	8019965	8021075	1000	+	.	source_transcript=ENST00000454315.1;source_transcript_name=MTCYBP1-201;source_gene=ENSG00000234179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454315.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454315.1;transcript_score=198.481;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;transcript_id=CHM13_chrY_T0000533;gene_id=CHM13_chrY_G0000146;Parent=CHM13_chrY_G0000146;transcript_name=CHM13_chrY_T0000533;gene_name=MTCYBP1;ID=CHM13_chrY_T0000533;Name=MTCYBP1
CHM13_chrY	CAT	exon	8019965	8021075	.	+	.	source_transcript=ENST00000454315.1;source_transcript_name=MTCYBP1-201;source_gene=ENSG00000234179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454315.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454315.1;transcript_score=198.481;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;transcript_id=CHM13_chrY_T0000533;gene_id=CHM13_chrY_G0000146;Parent=CHM13_chrY_T0000533;transcript_name=CHM13_chrY_T0000533;gene_name=MTCYBP1;ID=exon:CHM13_chrY_T0000533:0;Name=MTCYBP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8027588	8027955	.	+	.	source_gene_common_name=MTND1P1;source_gene=ENSG00000226529.1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;gene_id=CHM13_chrY_G0000147;gene_biotype=processed_pseudogene;gene_name=MTND1P1;gene_sources=liftoff;ID=CHM13_chrY_G0000147;Name=MTND1P1
CHM13_chrY	CAT	transcript	8027588	8027955	1000	+	.	source_transcript=ENST00000445453.1;source_transcript_name=MTND1P1-201;source_gene=ENSG00000226529.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226529.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445453.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;transcript_id=CHM13_chrY_T0000534;gene_id=CHM13_chrY_G0000147;Parent=CHM13_chrY_G0000147;transcript_name=CHM13_chrY_T0000534;gene_name=MTND1P1;ID=CHM13_chrY_T0000534;Name=MTND1P1
CHM13_chrY	CAT	exon	8027588	8027955	.	+	.	source_transcript=ENST00000445453.1;source_transcript_name=MTND1P1-201;source_gene=ENSG00000226529.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226529.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445453.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;transcript_id=CHM13_chrY_T0000534;gene_id=CHM13_chrY_G0000147;Parent=CHM13_chrY_T0000534;transcript_name=CHM13_chrY_T0000534;gene_name=MTND1P1;ID=exon:CHM13_chrY_T0000534:0;Name=MTND1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8028166	8028635	.	+	.	source_gene_common_name=MTND2P3;source_gene=ENSG00000234850.1;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;gene_id=CHM13_chrY_G0000148;gene_biotype=processed_pseudogene;gene_name=MTND2P3;gene_sources=liftoff;ID=CHM13_chrY_G0000148;Name=MTND2P3
CHM13_chrY	CAT	transcript	8028166	8028635	1000	+	.	source_transcript=ENST00000452458.1;source_transcript_name=MTND2P3-201;source_gene=ENSG00000234850.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234850.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452458.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND2P3;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;transcript_id=CHM13_chrY_T0000535;gene_id=CHM13_chrY_G0000148;Parent=CHM13_chrY_G0000148;transcript_name=CHM13_chrY_T0000535;gene_name=MTND2P3;ID=CHM13_chrY_T0000535;Name=MTND2P3
CHM13_chrY	CAT	exon	8028166	8028635	.	+	.	source_transcript=ENST00000452458.1;source_transcript_name=MTND2P3-201;source_gene=ENSG00000234850.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234850.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452458.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND2P3;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;transcript_id=CHM13_chrY_T0000535;gene_id=CHM13_chrY_G0000148;Parent=CHM13_chrY_T0000535;transcript_name=CHM13_chrY_T0000535;gene_name=MTND2P3;ID=exon:CHM13_chrY_T0000535:0;Name=MTND2P3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8050966	8063325	.	+	.	source_gene_common_name=ENSG00000303338;source_gene=ENSG00000303338.1;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;gene_id=CHM13_chrY_G0000149;gene_biotype=lncRNA;gene_name=ENSG00000303338;gene_sources=liftoff;ID=CHM13_chrY_G0000149;Name=ENSG00000303338
CHM13_chrY	CAT	transcript	8050966	8058766	1000	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=CHM13_chrY_T0000536;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_G0000149;transcript_name=CHM13_chrY_T0000536;gene_name=ENSG00000303338;ID=CHM13_chrY_T0000536;Name=ENSG00000303338
CHM13_chrY	CAT	exon	8050966	8051057	.	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=CHM13_chrY_T0000536;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000536;transcript_name=CHM13_chrY_T0000536;gene_name=ENSG00000303338;ID=exon:CHM13_chrY_T0000536:0;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8051058	8058651	.	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=CHM13_chrY_T0000536;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000536;transcript_name=CHM13_chrY_T0000536;gene_name=ENSG00000303338;ID=intron:CHM13_chrY_T0000536:0;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8058652	8058766	.	+	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=CHM13_chrY_T0000536;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000536;transcript_name=CHM13_chrY_T0000536;gene_name=ENSG00000303338;ID=exon:CHM13_chrY_T0000536:1;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8050966	8056255	1000	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=CHM13_chrY_T0000537;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_G0000149;transcript_name=CHM13_chrY_T0000537;gene_name=ENSG00000303338;ID=CHM13_chrY_T0000537;Name=ENSG00000303338
CHM13_chrY	CAT	exon	8050966	8051057	.	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=CHM13_chrY_T0000537;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000537;transcript_name=CHM13_chrY_T0000537;gene_name=ENSG00000303338;ID=exon:CHM13_chrY_T0000537:0;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8051058	8055998	.	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=CHM13_chrY_T0000537;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000537;transcript_name=CHM13_chrY_T0000537;gene_name=ENSG00000303338;ID=intron:CHM13_chrY_T0000537:0;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8055999	8056255	.	+	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=CHM13_chrY_T0000537;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000537;transcript_name=CHM13_chrY_T0000537;gene_name=ENSG00000303338;ID=exon:CHM13_chrY_T0000537:1;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8050972	8058761	1000	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=CHM13_chrY_T0000538;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_G0000149;transcript_name=CHM13_chrY_T0000538;gene_name=ENSG00000303338;ID=CHM13_chrY_T0000538;Name=ENSG00000303338
CHM13_chrY	CAT	exon	8050972	8051057	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=CHM13_chrY_T0000538;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000538;transcript_name=CHM13_chrY_T0000538;gene_name=ENSG00000303338;ID=exon:CHM13_chrY_T0000538:0;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8051058	8055998	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=CHM13_chrY_T0000538;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000538;transcript_name=CHM13_chrY_T0000538;gene_name=ENSG00000303338;ID=intron:CHM13_chrY_T0000538:0;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8055999	8056084	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=CHM13_chrY_T0000538;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000538;transcript_name=CHM13_chrY_T0000538;gene_name=ENSG00000303338;ID=exon:CHM13_chrY_T0000538:1;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8056085	8058651	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=CHM13_chrY_T0000538;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000538;transcript_name=CHM13_chrY_T0000538;gene_name=ENSG00000303338;ID=intron:CHM13_chrY_T0000538:1;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8058652	8058761	.	+	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=CHM13_chrY_T0000538;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000538;transcript_name=CHM13_chrY_T0000538;gene_name=ENSG00000303338;ID=exon:CHM13_chrY_T0000538:2;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8050998	8063325	1000	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=CHM13_chrY_T0000539;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_G0000149;transcript_name=CHM13_chrY_T0000539;gene_name=ENSG00000303338;ID=CHM13_chrY_T0000539;Name=ENSG00000303338
CHM13_chrY	CAT	exon	8050998	8051057	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=CHM13_chrY_T0000539;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000539;transcript_name=CHM13_chrY_T0000539;gene_name=ENSG00000303338;ID=exon:CHM13_chrY_T0000539:0;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8051058	8058651	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=CHM13_chrY_T0000539;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000539;transcript_name=CHM13_chrY_T0000539;gene_name=ENSG00000303338;ID=intron:CHM13_chrY_T0000539:0;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8058652	8058905	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=CHM13_chrY_T0000539;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000539;transcript_name=CHM13_chrY_T0000539;gene_name=ENSG00000303338;ID=exon:CHM13_chrY_T0000539:1;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8058906	8059606	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=CHM13_chrY_T0000539;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000539;transcript_name=CHM13_chrY_T0000539;gene_name=ENSG00000303338;ID=intron:CHM13_chrY_T0000539:1;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8059607	8059759	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=CHM13_chrY_T0000539;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000539;transcript_name=CHM13_chrY_T0000539;gene_name=ENSG00000303338;ID=exon:CHM13_chrY_T0000539:2;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8059760	8063051	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=CHM13_chrY_T0000539;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000539;transcript_name=CHM13_chrY_T0000539;gene_name=ENSG00000303338;ID=intron:CHM13_chrY_T0000539:2;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8063052	8063325	.	+	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=CHM13_chrY_T0000539;gene_id=CHM13_chrY_G0000149;Parent=CHM13_chrY_T0000539;transcript_name=CHM13_chrY_T0000539;gene_name=ENSG00000303338;ID=exon:CHM13_chrY_T0000539:3;Name=ENSG00000303338;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8068962	8069979	.	-	.	source_gene_common_name=TRIM60P3Y;source_gene=ENSG00000227830.1;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;gene_id=CHM13_chrY_G0000150;gene_biotype=processed_pseudogene;gene_name=TRIM60P3Y;gene_sources=liftoff;ID=CHM13_chrY_G0000150;Name=TRIM60P3Y
CHM13_chrY	CAT	transcript	8068962	8069979	1000	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=CHM13_chrY_T0000540;gene_id=CHM13_chrY_G0000150;Parent=CHM13_chrY_G0000150;transcript_name=CHM13_chrY_T0000540;gene_name=TRIM60P3Y;ID=CHM13_chrY_T0000540;Name=TRIM60P3Y
CHM13_chrY	CAT	exon	8068962	8069379	.	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=CHM13_chrY_T0000540;gene_id=CHM13_chrY_G0000150;Parent=CHM13_chrY_T0000540;transcript_name=CHM13_chrY_T0000540;gene_name=TRIM60P3Y;ID=exon:CHM13_chrY_T0000540:0;Name=TRIM60P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8069380	8069724	.	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=CHM13_chrY_T0000540;gene_id=CHM13_chrY_G0000150;Parent=CHM13_chrY_T0000540;transcript_name=CHM13_chrY_T0000540;gene_name=TRIM60P3Y;ID=intron:CHM13_chrY_T0000540:0;Name=TRIM60P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8069725	8069979	.	-	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=CHM13_chrY_T0000540;gene_id=CHM13_chrY_G0000150;Parent=CHM13_chrY_T0000540;transcript_name=CHM13_chrY_T0000540;gene_name=TRIM60P3Y;ID=exon:CHM13_chrY_T0000540:1;Name=TRIM60P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8074716	8075825	.	-	.	source_gene_common_name=ZNF736P10Y;source_gene=ENSG00000216824.2;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;gene_id=CHM13_chrY_G0000151;gene_biotype=processed_pseudogene;gene_name=ZNF736P10Y;gene_sources=liftoff;ID=CHM13_chrY_G0000151;Name=ZNF736P10Y
CHM13_chrY	CAT	transcript	8074716	8075825	1000	-	.	source_transcript=ENST00000403990.2;source_transcript_name=ZNF736P10Y-201;source_gene=ENSG00000216824.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216824.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403990.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P10Y;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;transcript_id=CHM13_chrY_T0000541;gene_id=CHM13_chrY_G0000151;Parent=CHM13_chrY_G0000151;transcript_name=CHM13_chrY_T0000541;gene_name=ZNF736P10Y;ID=CHM13_chrY_T0000541;Name=ZNF736P10Y
CHM13_chrY	CAT	exon	8074716	8075825	.	-	.	source_transcript=ENST00000403990.2;source_transcript_name=ZNF736P10Y-201;source_gene=ENSG00000216824.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216824.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403990.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P10Y;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;transcript_id=CHM13_chrY_T0000541;gene_id=CHM13_chrY_G0000151;Parent=CHM13_chrY_T0000541;transcript_name=CHM13_chrY_T0000541;gene_name=ZNF736P10Y;ID=exon:CHM13_chrY_T0000541:0;Name=ZNF736P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8173257	8173641	.	-	.	source_gene_common_name=ENSG00000275866;source_gene=ENSG00000275866.1;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;gene_id=CHM13_chrY_G0000152;gene_biotype=processed_pseudogene;gene_name=ENSG00000275866;gene_sources=liftoff;ID=CHM13_chrY_G0000152;Name=ENSG00000275866
CHM13_chrY	CAT	transcript	8173257	8173641	1000	-	.	source_transcript=ENST00000621514.1;source_transcript_name=ENST00000621514;source_gene=ENSG00000275866.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275866.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621514.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275866;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;transcript_id=CHM13_chrY_T0000542;gene_id=CHM13_chrY_G0000152;Parent=CHM13_chrY_G0000152;transcript_name=CHM13_chrY_T0000542;gene_name=ENSG00000275866;ID=CHM13_chrY_T0000542;Name=ENSG00000275866
CHM13_chrY	CAT	exon	8173257	8173641	.	-	.	source_transcript=ENST00000621514.1;source_transcript_name=ENST00000621514;source_gene=ENSG00000275866.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275866.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621514.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275866;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;transcript_id=CHM13_chrY_T0000542;gene_id=CHM13_chrY_G0000152;Parent=CHM13_chrY_T0000542;transcript_name=CHM13_chrY_T0000542;gene_name=ENSG00000275866;ID=exon:CHM13_chrY_T0000542:0;Name=ENSG00000275866;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8206391	8369845	.	+	.	source_gene_common_name=LINC00279;source_gene=ENSG00000286217.3;gene_id=CHM13_chrY_G0000153;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=CHM13_chrY_G0000153;Name=LINC00279
CHM13_chrY	CAT	transcript	8206391	8216827	1000	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000543;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000543;gene_name=LINC00279;ID=CHM13_chrY_T0000543;Name=LINC00279
CHM13_chrY	CAT	exon	8206391	8206502	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000543;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000543;transcript_name=CHM13_chrY_T0000543;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000543:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8206503	8215337	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000543;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000543;transcript_name=CHM13_chrY_T0000543;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000543:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8215338	8215445	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000543;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000543;transcript_name=CHM13_chrY_T0000543;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000543:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8215446	8216296	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000543;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000543;transcript_name=CHM13_chrY_T0000543;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000543:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8216297	8216827	.	+	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000543;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000543;transcript_name=CHM13_chrY_T0000543;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000543:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8206415	8258441	1000	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=CHM13_chrY_T0000544;Name=LINC00279
CHM13_chrY	CAT	exon	8206415	8206502	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8206503	8215337	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8215338	8215445	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8215446	8216296	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8216297	8216416	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8216417	8216985	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8216986	8217063	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8217064	8217957	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8217958	8218192	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:4;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8218193	8237556	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:4;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8237557	8237720	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:5;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8237721	8239487	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:5;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8239488	8239603	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:6;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8239604	8241111	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:6;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8241112	8241162	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:7;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8241163	8251120	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:7;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8251121	8251360	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:8;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8251361	8252707	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:8;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8252708	8252788	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:9;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8252789	8253013	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:9;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8253014	8253107	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:10;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8253108	8253458	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:10;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8253459	8253618	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:11;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8253619	8256541	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:11;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8256542	8256622	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:12;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8256623	8256834	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:12;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8256835	8256942	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:13;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8256943	8257113	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000544:13;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8257114	8258441	.	+	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000544;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000544;transcript_name=CHM13_chrY_T0000544;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000544:14;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8239351	8343450	1000	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000545;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000545;gene_name=LINC00279;ID=CHM13_chrY_T0000545;Name=LINC00279
CHM13_chrY	CAT	exon	8239351	8239603	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000545;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000545;transcript_name=CHM13_chrY_T0000545;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000545:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8239604	8334341	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000545;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000545;transcript_name=CHM13_chrY_T0000545;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000545:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8334342	8334416	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000545;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000545;transcript_name=CHM13_chrY_T0000545;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000545:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8334417	8336740	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000545;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000545;transcript_name=CHM13_chrY_T0000545;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000545:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8336741	8336900	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000545;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000545;transcript_name=CHM13_chrY_T0000545;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000545:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8336901	8338331	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000545;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000545;transcript_name=CHM13_chrY_T0000545;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000545:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8338332	8338493	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000545;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000545;transcript_name=CHM13_chrY_T0000545;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000545:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8338494	8343202	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000545;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000545;transcript_name=CHM13_chrY_T0000545;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000545:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8343203	8343450	.	+	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000545;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000545;transcript_name=CHM13_chrY_T0000545;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000545:4;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8239351	8306481	1000	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000546;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000546;gene_name=LINC00279;ID=CHM13_chrY_T0000546;Name=LINC00279
CHM13_chrY	CAT	exon	8239351	8239603	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000546;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000546;transcript_name=CHM13_chrY_T0000546;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000546:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8239604	8288460	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000546;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000546;transcript_name=CHM13_chrY_T0000546;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000546:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8288461	8288547	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000546;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000546;transcript_name=CHM13_chrY_T0000546;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000546:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8288548	8289007	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000546;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000546;transcript_name=CHM13_chrY_T0000546;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000546:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8289008	8289230	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000546;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000546;transcript_name=CHM13_chrY_T0000546;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000546:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8289231	8305417	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000546;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000546;transcript_name=CHM13_chrY_T0000546;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000546:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8305418	8305567	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000546;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000546;transcript_name=CHM13_chrY_T0000546;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000546:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8305568	8306143	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000546;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000546;transcript_name=CHM13_chrY_T0000546;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000546:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8306144	8306481	.	+	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000546;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000546;transcript_name=CHM13_chrY_T0000546;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000546:4;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8239362	8369845	1000	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=CHM13_chrY_T0000547;Name=LINC00279
CHM13_chrY	CAT	exon	8239362	8239603	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000547:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8239604	8334341	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000547:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8334342	8334416	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000547:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8334417	8336740	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000547:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8336741	8336900	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000547:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8336901	8338331	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000547:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8338332	8338493	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000547:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8338494	8343202	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000547:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8343203	8343406	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000547:4;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8343407	8346188	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000547:4;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8346189	8346350	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000547:5;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8346351	8349021	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000547:5;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8349022	8349217	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000547:6;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8349218	8353764	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000547:6;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8353765	8353926	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000547:7;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8353927	8356079	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000547:7;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8356080	8356241	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000547:8;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8356242	8361110	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000547:8;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8361111	8361272	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000547:9;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8361273	8366118	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000547:9;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8366119	8366280	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000547:10;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8366281	8369273	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000547:10;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8369274	8369845	.	+	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000547;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000547;transcript_name=CHM13_chrY_T0000547;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000547:11;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8239379	8306479	1000	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000548;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000548;gene_name=LINC00279;ID=CHM13_chrY_T0000548;Name=LINC00279
CHM13_chrY	CAT	exon	8239379	8239603	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000548;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000548;transcript_name=CHM13_chrY_T0000548;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000548:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8239604	8305417	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000548;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000548;transcript_name=CHM13_chrY_T0000548;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000548:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8305418	8305567	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000548;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000548;transcript_name=CHM13_chrY_T0000548;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000548:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8305568	8306143	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000548;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000548;transcript_name=CHM13_chrY_T0000548;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000548:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8306144	8306479	.	+	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000548;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000548;transcript_name=CHM13_chrY_T0000548;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000548:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8239379	8251963	1000	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000549;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000549;gene_name=LINC00279;ID=CHM13_chrY_T0000549;Name=LINC00279
CHM13_chrY	CAT	exon	8239379	8239609	.	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000549;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000549;transcript_name=CHM13_chrY_T0000549;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000549:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8239610	8251098	.	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000549;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000549;transcript_name=CHM13_chrY_T0000549;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000549:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8251099	8251963	.	+	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000549;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000549;transcript_name=CHM13_chrY_T0000549;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000549:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8239390	8306478	1000	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000550;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000550;gene_name=LINC00279;ID=CHM13_chrY_T0000550;Name=LINC00279
CHM13_chrY	CAT	exon	8239390	8239609	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000550;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000550;transcript_name=CHM13_chrY_T0000550;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000550:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8239610	8305417	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000550;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000550;transcript_name=CHM13_chrY_T0000550;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000550:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8305418	8305567	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000550;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000550;transcript_name=CHM13_chrY_T0000550;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000550:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8305568	8306143	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000550;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000550;transcript_name=CHM13_chrY_T0000550;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000550:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8306144	8306478	.	+	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000550;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000550;transcript_name=CHM13_chrY_T0000550;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000550:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8239409	8322007	1000	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000551;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000551;gene_name=LINC00279;ID=CHM13_chrY_T0000551;Name=LINC00279
CHM13_chrY	CAT	exon	8239409	8239603	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000551;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000551;transcript_name=CHM13_chrY_T0000551;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000551:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8239604	8313941	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000551;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000551;transcript_name=CHM13_chrY_T0000551;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000551:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8313942	8314014	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000551;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000551;transcript_name=CHM13_chrY_T0000551;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000551:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8314015	8316483	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000551;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000551;transcript_name=CHM13_chrY_T0000551;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000551:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8316484	8322007	.	+	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000551;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000551;transcript_name=CHM13_chrY_T0000551;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000551:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8239409	8350844	1000	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=CHM13_chrY_T0000552;Name=LINC00279
CHM13_chrY	CAT	exon	8239409	8239603	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000552:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8239604	8334341	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000552:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8334342	8334416	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000552:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8334417	8336740	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000552:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8336741	8336900	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000552:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8336901	8338331	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000552:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8338332	8338493	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000552:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8338494	8343202	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000552:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8343203	8343406	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000552:4;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8343407	8346188	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000552:4;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8346189	8346350	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000552:5;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8346351	8349021	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000552:5;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8349022	8350170	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000552:6;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8350171	8350395	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000552:6;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8350396	8350844	.	+	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000552;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000552;transcript_name=CHM13_chrY_T0000552;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000552:7;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8239529	8253710	1000	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000553;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000553;gene_name=LINC00279;ID=CHM13_chrY_T0000553;Name=LINC00279
CHM13_chrY	CAT	exon	8239529	8239609	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000553;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000553;transcript_name=CHM13_chrY_T0000553;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000553:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8239610	8241111	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000553;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000553;transcript_name=CHM13_chrY_T0000553;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000553:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8241112	8241162	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000553;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000553;transcript_name=CHM13_chrY_T0000553;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000553:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8241163	8251120	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000553;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000553;transcript_name=CHM13_chrY_T0000553;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000553:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8251121	8251360	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000553;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000553;transcript_name=CHM13_chrY_T0000553;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000553:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8251361	8253458	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000553;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000553;transcript_name=CHM13_chrY_T0000553;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000553:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8253459	8253710	.	+	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000553;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000553;transcript_name=CHM13_chrY_T0000553;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000553:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8255965	8306453	1000	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=CHM13_chrY_T0000554;Name=LINC00279
CHM13_chrY	CAT	exon	8255965	8256942	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000554;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000554:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8256943	8262864	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000554;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000554:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8262865	8262937	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000554;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000554:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8262938	8263144	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000554;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000554:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8263145	8263231	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000554;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000554:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8263232	8288460	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000554;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000554:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8288461	8288547	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000554;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000554:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8288548	8289007	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000554;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000554:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8289008	8289230	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000554;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000554:4;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8289231	8305417	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000554;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000554:4;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8305418	8305567	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000554;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000554:5;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8305568	8306143	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000554;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000554:5;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8306144	8306453	.	+	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000554;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000554;transcript_name=CHM13_chrY_T0000554;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000554:6;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8288941	8343445	1000	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000555;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000555;gene_name=LINC00279;ID=CHM13_chrY_T0000555;Name=LINC00279
CHM13_chrY	CAT	exon	8288941	8289230	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000555;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000555;transcript_name=CHM13_chrY_T0000555;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000555:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8289231	8334341	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000555;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000555;transcript_name=CHM13_chrY_T0000555;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000555:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8334342	8334416	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000555;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000555;transcript_name=CHM13_chrY_T0000555;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000555:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8334417	8336740	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000555;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000555;transcript_name=CHM13_chrY_T0000555;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000555:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8336741	8336900	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000555;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000555;transcript_name=CHM13_chrY_T0000555;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000555:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8336901	8338331	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000555;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000555;transcript_name=CHM13_chrY_T0000555;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000555:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8338332	8338493	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000555;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000555;transcript_name=CHM13_chrY_T0000555;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000555:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8338494	8343202	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000555;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000555;transcript_name=CHM13_chrY_T0000555;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000555:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8343203	8343445	.	+	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000555;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000555;transcript_name=CHM13_chrY_T0000555;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000555:4;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8288993	8306481	1000	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000556;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000556;gene_name=LINC00279;ID=CHM13_chrY_T0000556;Name=LINC00279
CHM13_chrY	CAT	exon	8288993	8289230	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000556;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000556;transcript_name=CHM13_chrY_T0000556;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000556:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8289231	8305417	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000556;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000556;transcript_name=CHM13_chrY_T0000556;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000556:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8305418	8305567	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000556;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000556;transcript_name=CHM13_chrY_T0000556;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000556:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8305568	8306143	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000556;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000556;transcript_name=CHM13_chrY_T0000556;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000556:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8306144	8306481	.	+	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000556;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000556;transcript_name=CHM13_chrY_T0000556;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000556:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8289084	8306387	1000	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000557;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000557;gene_name=LINC00279;ID=CHM13_chrY_T0000557;Name=LINC00279
CHM13_chrY	CAT	exon	8289084	8289230	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000557;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000557;transcript_name=CHM13_chrY_T0000557;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000557:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8289231	8295542	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000557;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000557;transcript_name=CHM13_chrY_T0000557;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000557:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8295543	8295771	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000557;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000557;transcript_name=CHM13_chrY_T0000557;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000557:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8295772	8300114	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000557;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000557;transcript_name=CHM13_chrY_T0000557;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000557:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8300115	8300310	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000557;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000557;transcript_name=CHM13_chrY_T0000557;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000557:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8300311	8305417	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000557;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000557;transcript_name=CHM13_chrY_T0000557;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000557:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8305418	8305567	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000557;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000557;transcript_name=CHM13_chrY_T0000557;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000557:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8305568	8306143	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000557;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000557;transcript_name=CHM13_chrY_T0000557;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000557:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8306144	8306387	.	+	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000557;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000557;transcript_name=CHM13_chrY_T0000557;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000557:4;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8294277	8300825	1000	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000558;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000558;gene_name=LINC00279;ID=CHM13_chrY_T0000558;Name=LINC00279
CHM13_chrY	CAT	exon	8294277	8294389	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000558;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000558;transcript_name=CHM13_chrY_T0000558;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000558:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8294390	8300114	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000558;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000558;transcript_name=CHM13_chrY_T0000558;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000558:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8300115	8300310	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000558;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000558;transcript_name=CHM13_chrY_T0000558;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000558:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8300311	8300661	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000558;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000558;transcript_name=CHM13_chrY_T0000558;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000558:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8300662	8300825	.	+	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000558;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000558;transcript_name=CHM13_chrY_T0000558;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000558:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8315957	8316698	1000	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000559;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000559;gene_name=LINC00279;ID=CHM13_chrY_T0000559;Name=LINC00279
CHM13_chrY	CAT	exon	8315957	8316148	.	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000559;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000559;transcript_name=CHM13_chrY_T0000559;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000559:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8316149	8316483	.	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000559;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000559;transcript_name=CHM13_chrY_T0000559;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000559:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8316484	8316698	.	+	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000559;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000559;transcript_name=CHM13_chrY_T0000559;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000559:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8333706	8338718	1000	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000572;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000572;gene_name=LINC00279;ID=CHM13_chrY_T0000572;Name=LINC00279
CHM13_chrY	CAT	exon	8333706	8334070	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000572;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000572;transcript_name=CHM13_chrY_T0000572;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000572:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8334071	8334341	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000572;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000572;transcript_name=CHM13_chrY_T0000572;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000572:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8334342	8334416	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000572;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000572;transcript_name=CHM13_chrY_T0000572;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000572:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8334417	8336740	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000572;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000572;transcript_name=CHM13_chrY_T0000572;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000572:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8336741	8336900	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000572;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000572;transcript_name=CHM13_chrY_T0000572;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000572:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8336901	8338331	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000572;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000572;transcript_name=CHM13_chrY_T0000572;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000572:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8338332	8338718	.	+	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000572;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000572;transcript_name=CHM13_chrY_T0000572;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000572:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8333713	8334744	1000	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000573;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000573;gene_name=LINC00279;ID=CHM13_chrY_T0000573;Name=LINC00279
CHM13_chrY	CAT	exon	8333713	8334070	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000573;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000573;transcript_name=CHM13_chrY_T0000573;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000573:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8334071	8334341	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000573;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000573;transcript_name=CHM13_chrY_T0000573;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000573:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8334342	8334416	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000573;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000573;transcript_name=CHM13_chrY_T0000573;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000573:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8334417	8334576	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000573;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000573;transcript_name=CHM13_chrY_T0000573;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000573:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8334577	8334744	.	+	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000573;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000573;transcript_name=CHM13_chrY_T0000573;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000573:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8333858	8343446	1000	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000574;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000574;gene_name=LINC00279;ID=CHM13_chrY_T0000574;Name=LINC00279
CHM13_chrY	CAT	exon	8333858	8334070	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000574;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000574;transcript_name=CHM13_chrY_T0000574;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000574:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8334071	8334341	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000574;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000574;transcript_name=CHM13_chrY_T0000574;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000574:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8334342	8334416	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000574;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000574;transcript_name=CHM13_chrY_T0000574;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000574:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8334417	8336740	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000574;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000574;transcript_name=CHM13_chrY_T0000574;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000574:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8336741	8336900	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000574;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000574;transcript_name=CHM13_chrY_T0000574;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000574:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8336901	8338331	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000574;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000574;transcript_name=CHM13_chrY_T0000574;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000574:2;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8338332	8338493	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000574;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000574;transcript_name=CHM13_chrY_T0000574;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000574:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8338494	8343202	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000574;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000574;transcript_name=CHM13_chrY_T0000574;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000574:3;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8343203	8343446	.	+	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000574;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000574;transcript_name=CHM13_chrY_T0000574;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000574:4;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8341835	8343449	1000	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000582;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_G0000153;transcript_name=CHM13_chrY_T0000582;gene_name=LINC00279;ID=CHM13_chrY_T0000582;Name=LINC00279
CHM13_chrY	CAT	exon	8341835	8342089	.	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000582;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000582;transcript_name=CHM13_chrY_T0000582;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000582:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8342090	8343202	.	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000582;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000582;transcript_name=CHM13_chrY_T0000582;gene_name=LINC00279;ID=intron:CHM13_chrY_T0000582:0;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8343203	8343449	.	+	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=CHM13_chrY_T0000582;gene_id=CHM13_chrY_G0000153;Parent=CHM13_chrY_T0000582;transcript_name=CHM13_chrY_T0000582;gene_name=LINC00279;ID=exon:CHM13_chrY_T0000582:1;Name=LINC00279;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8323398	8335183	.	-	.	source_gene_common_name=ENSG00000309700;source_gene=ENSG00000309700.1;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;gene_id=CHM13_chrY_G0000154;gene_biotype=lncRNA;gene_name=ENSG00000309700;gene_sources=liftoff;ID=CHM13_chrY_G0000154;Name=ENSG00000309700
CHM13_chrY	CAT	transcript	8323398	8333719	1000	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=CHM13_chrY_T0000560;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_G0000154;transcript_name=CHM13_chrY_T0000560;gene_name=ENSG00000309700;ID=CHM13_chrY_T0000560;Name=ENSG00000309700
CHM13_chrY	CAT	exon	8323398	8323640	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=CHM13_chrY_T0000560;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000560;transcript_name=CHM13_chrY_T0000560;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000560:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8323641	8329748	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=CHM13_chrY_T0000560;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000560;transcript_name=CHM13_chrY_T0000560;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000560:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8329749	8329897	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=CHM13_chrY_T0000560;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000560;transcript_name=CHM13_chrY_T0000560;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000560:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8329898	8330875	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=CHM13_chrY_T0000560;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000560;transcript_name=CHM13_chrY_T0000560;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000560:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8330876	8330950	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=CHM13_chrY_T0000560;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000560;transcript_name=CHM13_chrY_T0000560;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000560:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8330951	8333248	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=CHM13_chrY_T0000560;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000560;transcript_name=CHM13_chrY_T0000560;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000560:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8333249	8333719	.	-	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1,ENST00000843135.1;transcript_id=CHM13_chrY_T0000560;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000560;transcript_name=CHM13_chrY_T0000560;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000560:3;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8323398	8330051	1000	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=CHM13_chrY_T0000561;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_G0000154;transcript_name=CHM13_chrY_T0000561;gene_name=ENSG00000309700;ID=CHM13_chrY_T0000561;Name=ENSG00000309700
CHM13_chrY	CAT	exon	8323398	8323640	.	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=CHM13_chrY_T0000561;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000561;transcript_name=CHM13_chrY_T0000561;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000561:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8323641	8329748	.	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=CHM13_chrY_T0000561;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000561;transcript_name=CHM13_chrY_T0000561;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000561:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8329749	8330051	.	-	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1,ENST00000843140.1;transcript_id=CHM13_chrY_T0000561;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000561;transcript_name=CHM13_chrY_T0000561;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000561:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8323399	8335162	1000	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=CHM13_chrY_T0000562;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_G0000154;transcript_name=CHM13_chrY_T0000562;gene_name=ENSG00000309700;ID=CHM13_chrY_T0000562;Name=ENSG00000309700
CHM13_chrY	CAT	exon	8323399	8323640	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=CHM13_chrY_T0000562;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000562;transcript_name=CHM13_chrY_T0000562;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000562:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8323641	8329748	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=CHM13_chrY_T0000562;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000562;transcript_name=CHM13_chrY_T0000562;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000562:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8329749	8329897	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=CHM13_chrY_T0000562;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000562;transcript_name=CHM13_chrY_T0000562;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000562:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8329898	8330875	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=CHM13_chrY_T0000562;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000562;transcript_name=CHM13_chrY_T0000562;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000562:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8330876	8330950	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=CHM13_chrY_T0000562;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000562;transcript_name=CHM13_chrY_T0000562;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000562:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8330951	8333248	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=CHM13_chrY_T0000562;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000562;transcript_name=CHM13_chrY_T0000562;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000562:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8333249	8333479	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=CHM13_chrY_T0000562;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000562;transcript_name=CHM13_chrY_T0000562;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000562:3;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8333480	8334971	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=CHM13_chrY_T0000562;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000562;transcript_name=CHM13_chrY_T0000562;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000562:3;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8334972	8335162	.	-	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=CHM13_chrY_T0000562;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000562;transcript_name=CHM13_chrY_T0000562;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000562:4;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8323399	8335154	1000	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=CHM13_chrY_T0000563;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_G0000154;transcript_name=CHM13_chrY_T0000563;gene_name=ENSG00000309700;ID=CHM13_chrY_T0000563;Name=ENSG00000309700
CHM13_chrY	CAT	exon	8323399	8323640	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=CHM13_chrY_T0000563;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000563;transcript_name=CHM13_chrY_T0000563;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000563:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8323641	8329748	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=CHM13_chrY_T0000563;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000563;transcript_name=CHM13_chrY_T0000563;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000563:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8329749	8329897	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=CHM13_chrY_T0000563;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000563;transcript_name=CHM13_chrY_T0000563;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000563:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8329898	8330875	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=CHM13_chrY_T0000563;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000563;transcript_name=CHM13_chrY_T0000563;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000563:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8330876	8330950	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=CHM13_chrY_T0000563;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000563;transcript_name=CHM13_chrY_T0000563;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000563:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8330951	8333248	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=CHM13_chrY_T0000563;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000563;transcript_name=CHM13_chrY_T0000563;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000563:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8333249	8333332	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=CHM13_chrY_T0000563;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000563;transcript_name=CHM13_chrY_T0000563;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000563:3;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8333333	8334971	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=CHM13_chrY_T0000563;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000563;transcript_name=CHM13_chrY_T0000563;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000563:3;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8334972	8335154	.	-	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=CHM13_chrY_T0000563;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000563;transcript_name=CHM13_chrY_T0000563;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000563:4;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8323399	8335068	1000	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=CHM13_chrY_T0000564;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_G0000154;transcript_name=CHM13_chrY_T0000564;gene_name=ENSG00000309700;ID=CHM13_chrY_T0000564;Name=ENSG00000309700
CHM13_chrY	CAT	exon	8323399	8323640	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=CHM13_chrY_T0000564;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000564;transcript_name=CHM13_chrY_T0000564;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000564:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8323641	8330875	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=CHM13_chrY_T0000564;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000564;transcript_name=CHM13_chrY_T0000564;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000564:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8330876	8330950	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=CHM13_chrY_T0000564;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000564;transcript_name=CHM13_chrY_T0000564;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000564:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8330951	8333248	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=CHM13_chrY_T0000564;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000564;transcript_name=CHM13_chrY_T0000564;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000564:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8333249	8333332	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=CHM13_chrY_T0000564;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000564;transcript_name=CHM13_chrY_T0000564;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000564:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8333333	8334971	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=CHM13_chrY_T0000564;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000564;transcript_name=CHM13_chrY_T0000564;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000564:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8334972	8335068	.	-	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=CHM13_chrY_T0000564;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000564;transcript_name=CHM13_chrY_T0000564;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000564:3;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8323399	8333631	1000	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=CHM13_chrY_T0000565;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_G0000154;transcript_name=CHM13_chrY_T0000565;gene_name=ENSG00000309700;ID=CHM13_chrY_T0000565;Name=ENSG00000309700
CHM13_chrY	CAT	exon	8323399	8323640	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=CHM13_chrY_T0000565;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000565;transcript_name=CHM13_chrY_T0000565;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000565:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8323641	8329748	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=CHM13_chrY_T0000565;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000565;transcript_name=CHM13_chrY_T0000565;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000565:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8329749	8329897	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=CHM13_chrY_T0000565;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000565;transcript_name=CHM13_chrY_T0000565;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000565:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8329898	8333248	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=CHM13_chrY_T0000565;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000565;transcript_name=CHM13_chrY_T0000565;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000565:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8333249	8333631	.	-	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=CHM13_chrY_T0000565;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000565;transcript_name=CHM13_chrY_T0000565;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000565:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8323399	8333585	1000	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=CHM13_chrY_T0000566;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_G0000154;transcript_name=CHM13_chrY_T0000566;gene_name=ENSG00000309700;ID=CHM13_chrY_T0000566;Name=ENSG00000309700
CHM13_chrY	CAT	exon	8323399	8323640	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=CHM13_chrY_T0000566;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000566;transcript_name=CHM13_chrY_T0000566;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000566:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8323641	8330875	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=CHM13_chrY_T0000566;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000566;transcript_name=CHM13_chrY_T0000566;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000566:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8330876	8330950	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=CHM13_chrY_T0000566;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000566;transcript_name=CHM13_chrY_T0000566;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000566:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8330951	8333248	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=CHM13_chrY_T0000566;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000566;transcript_name=CHM13_chrY_T0000566;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000566:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8333249	8333585	.	-	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=CHM13_chrY_T0000566;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000566;transcript_name=CHM13_chrY_T0000566;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000566:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8323399	8333450	1000	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=CHM13_chrY_T0000567;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_G0000154;transcript_name=CHM13_chrY_T0000567;gene_name=ENSG00000309700;ID=CHM13_chrY_T0000567;Name=ENSG00000309700
CHM13_chrY	CAT	exon	8323399	8323640	.	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=CHM13_chrY_T0000567;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000567;transcript_name=CHM13_chrY_T0000567;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000567:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8323641	8333248	.	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=CHM13_chrY_T0000567;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000567;transcript_name=CHM13_chrY_T0000567;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000567:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8333249	8333450	.	-	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=CHM13_chrY_T0000567;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000567;transcript_name=CHM13_chrY_T0000567;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000567:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8323400	8330041	1000	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=CHM13_chrY_T0000568;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_G0000154;transcript_name=CHM13_chrY_T0000568;gene_name=ENSG00000309700;ID=CHM13_chrY_T0000568;Name=ENSG00000309700
CHM13_chrY	CAT	exon	8323400	8323640	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=CHM13_chrY_T0000568;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000568;transcript_name=CHM13_chrY_T0000568;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000568:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8323641	8325235	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=CHM13_chrY_T0000568;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000568;transcript_name=CHM13_chrY_T0000568;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000568:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8325236	8325274	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=CHM13_chrY_T0000568;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000568;transcript_name=CHM13_chrY_T0000568;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000568:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8325275	8329748	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=CHM13_chrY_T0000568;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000568;transcript_name=CHM13_chrY_T0000568;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000568:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8329749	8330041	.	-	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=CHM13_chrY_T0000568;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000568;transcript_name=CHM13_chrY_T0000568;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000568:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8328130	8335183	1000	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=CHM13_chrY_T0000569;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_G0000154;transcript_name=CHM13_chrY_T0000569;gene_name=ENSG00000309700;ID=CHM13_chrY_T0000569;Name=ENSG00000309700
CHM13_chrY	CAT	exon	8328130	8328594	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=CHM13_chrY_T0000569;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000569;transcript_name=CHM13_chrY_T0000569;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000569:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8328595	8329748	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=CHM13_chrY_T0000569;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000569;transcript_name=CHM13_chrY_T0000569;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000569:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8329749	8329897	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=CHM13_chrY_T0000569;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000569;transcript_name=CHM13_chrY_T0000569;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000569:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8329898	8330875	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=CHM13_chrY_T0000569;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000569;transcript_name=CHM13_chrY_T0000569;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000569:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8330876	8330950	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=CHM13_chrY_T0000569;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000569;transcript_name=CHM13_chrY_T0000569;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000569:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8330951	8333248	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=CHM13_chrY_T0000569;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000569;transcript_name=CHM13_chrY_T0000569;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000569:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8333249	8333332	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=CHM13_chrY_T0000569;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000569;transcript_name=CHM13_chrY_T0000569;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000569:3;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8333333	8334971	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=CHM13_chrY_T0000569;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000569;transcript_name=CHM13_chrY_T0000569;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000569:3;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8334972	8335183	.	-	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=CHM13_chrY_T0000569;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000569;transcript_name=CHM13_chrY_T0000569;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000569:4;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8328130	8330047	1000	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=CHM13_chrY_T0000570;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_G0000154;transcript_name=CHM13_chrY_T0000570;gene_name=ENSG00000309700;ID=CHM13_chrY_T0000570;Name=ENSG00000309700
CHM13_chrY	CAT	exon	8328130	8328594	.	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=CHM13_chrY_T0000570;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000570;transcript_name=CHM13_chrY_T0000570;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000570:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8328595	8329748	.	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=CHM13_chrY_T0000570;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000570;transcript_name=CHM13_chrY_T0000570;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000570:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8329749	8330047	.	-	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=CHM13_chrY_T0000570;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000570;transcript_name=CHM13_chrY_T0000570;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000570:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8328133	8333418	1000	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=CHM13_chrY_T0000571;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_G0000154;transcript_name=CHM13_chrY_T0000571;gene_name=ENSG00000309700;ID=CHM13_chrY_T0000571;Name=ENSG00000309700
CHM13_chrY	CAT	exon	8328133	8328594	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=CHM13_chrY_T0000571;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000571;transcript_name=CHM13_chrY_T0000571;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000571:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8328595	8329748	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=CHM13_chrY_T0000571;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000571;transcript_name=CHM13_chrY_T0000571;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000571:0;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8329749	8329897	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=CHM13_chrY_T0000571;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000571;transcript_name=CHM13_chrY_T0000571;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000571:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8329898	8330875	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=CHM13_chrY_T0000571;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000571;transcript_name=CHM13_chrY_T0000571;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000571:1;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8330876	8330950	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=CHM13_chrY_T0000571;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000571;transcript_name=CHM13_chrY_T0000571;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000571:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8330951	8333248	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=CHM13_chrY_T0000571;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000571;transcript_name=CHM13_chrY_T0000571;gene_name=ENSG00000309700;ID=intron:CHM13_chrY_T0000571:2;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8333249	8333418	.	-	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=CHM13_chrY_T0000571;gene_id=CHM13_chrY_G0000154;Parent=CHM13_chrY_T0000571;transcript_name=CHM13_chrY_T0000571;gene_name=ENSG00000309700;ID=exon:CHM13_chrY_T0000571:3;Name=ENSG00000309700;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8338579	8366931	.	-	.	source_gene_common_name=TTTY18;source_gene=ENSG00000233699.3;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;gene_id=CHM13_chrY_G0000155;gene_biotype=lncRNA;gene_name=TTTY18;gene_sources=liftoff;ID=CHM13_chrY_G0000155;Name=TTTY18
CHM13_chrY	CAT	transcript	8338579	8356983	1000	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_G0000155;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=CHM13_chrY_T0000575;Name=TTTY18
CHM13_chrY	CAT	exon	8338579	8339417	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000575;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000575:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8339418	8339705	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000575;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000575:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8339706	8339924	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000575;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000575:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8339925	8342667	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000575;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000575:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8342668	8342722	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000575;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000575:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8342723	8345061	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000575;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000575:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8345062	8345146	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000575;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000575:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8345147	8349762	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000575;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000575:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8349763	8349968	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000575;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000575:4;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8349969	8350452	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000575;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000575:4;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8350453	8350530	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000575;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000575:5;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8350531	8356823	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000575;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000575:5;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8356824	8356983	.	-	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=CHM13_chrY_T0000575;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000575;transcript_name=CHM13_chrY_T0000575;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000575:6;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8338582	8347465	1000	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=CHM13_chrY_T0000576;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_G0000155;transcript_name=CHM13_chrY_T0000576;gene_name=TTTY18;ID=CHM13_chrY_T0000576;Name=TTTY18
CHM13_chrY	CAT	exon	8338582	8339417	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=CHM13_chrY_T0000576;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000576;transcript_name=CHM13_chrY_T0000576;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000576:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8339418	8339705	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=CHM13_chrY_T0000576;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000576;transcript_name=CHM13_chrY_T0000576;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000576:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8339706	8339924	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=CHM13_chrY_T0000576;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000576;transcript_name=CHM13_chrY_T0000576;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000576:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8339925	8342667	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=CHM13_chrY_T0000576;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000576;transcript_name=CHM13_chrY_T0000576;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000576:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8342668	8342722	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=CHM13_chrY_T0000576;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000576;transcript_name=CHM13_chrY_T0000576;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000576:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8342723	8345061	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=CHM13_chrY_T0000576;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000576;transcript_name=CHM13_chrY_T0000576;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000576:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8345062	8345146	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=CHM13_chrY_T0000576;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000576;transcript_name=CHM13_chrY_T0000576;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000576:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8345147	8347255	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=CHM13_chrY_T0000576;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000576;transcript_name=CHM13_chrY_T0000576;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000576:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8347256	8347465	.	-	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=CHM13_chrY_T0000576;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000576;transcript_name=CHM13_chrY_T0000576;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000576:4;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8339104	8347465	1000	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=CHM13_chrY_T0000577;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_G0000155;transcript_name=CHM13_chrY_T0000577;gene_name=TTTY18;ID=CHM13_chrY_T0000577;Name=TTTY18
CHM13_chrY	CAT	exon	8339104	8339417	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=CHM13_chrY_T0000577;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000577;transcript_name=CHM13_chrY_T0000577;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000577:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8339418	8339705	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=CHM13_chrY_T0000577;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000577;transcript_name=CHM13_chrY_T0000577;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000577:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8339706	8339924	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=CHM13_chrY_T0000577;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000577;transcript_name=CHM13_chrY_T0000577;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000577:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8339925	8342667	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=CHM13_chrY_T0000577;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000577;transcript_name=CHM13_chrY_T0000577;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000577:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8342668	8342722	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=CHM13_chrY_T0000577;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000577;transcript_name=CHM13_chrY_T0000577;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000577:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8342723	8347255	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=CHM13_chrY_T0000577;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000577;transcript_name=CHM13_chrY_T0000577;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000577:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8347256	8347465	.	-	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=CHM13_chrY_T0000577;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000577;transcript_name=CHM13_chrY_T0000577;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000577:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8339108	8347430	1000	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=CHM13_chrY_T0000578;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_G0000155;transcript_name=CHM13_chrY_T0000578;gene_name=TTTY18;ID=CHM13_chrY_T0000578;Name=TTTY18
CHM13_chrY	CAT	exon	8339108	8339417	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=CHM13_chrY_T0000578;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000578;transcript_name=CHM13_chrY_T0000578;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000578:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8339418	8339705	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=CHM13_chrY_T0000578;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000578;transcript_name=CHM13_chrY_T0000578;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000578:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8339706	8339924	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=CHM13_chrY_T0000578;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000578;transcript_name=CHM13_chrY_T0000578;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000578:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8339925	8341506	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=CHM13_chrY_T0000578;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000578;transcript_name=CHM13_chrY_T0000578;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000578:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8341507	8341642	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=CHM13_chrY_T0000578;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000578;transcript_name=CHM13_chrY_T0000578;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000578:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8341643	8342667	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=CHM13_chrY_T0000578;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000578;transcript_name=CHM13_chrY_T0000578;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000578:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8342668	8342722	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=CHM13_chrY_T0000578;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000578;transcript_name=CHM13_chrY_T0000578;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000578:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8342723	8345061	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=CHM13_chrY_T0000578;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000578;transcript_name=CHM13_chrY_T0000578;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000578:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8345062	8345146	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=CHM13_chrY_T0000578;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000578;transcript_name=CHM13_chrY_T0000578;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000578:4;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8345147	8347255	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=CHM13_chrY_T0000578;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000578;transcript_name=CHM13_chrY_T0000578;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000578:4;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8347256	8347430	.	-	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=CHM13_chrY_T0000578;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000578;transcript_name=CHM13_chrY_T0000578;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000578:5;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8339108	8347427	1000	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=CHM13_chrY_T0000579;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_G0000155;transcript_name=CHM13_chrY_T0000579;gene_name=TTTY18;ID=CHM13_chrY_T0000579;Name=TTTY18
CHM13_chrY	CAT	exon	8339108	8339417	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=CHM13_chrY_T0000579;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000579;transcript_name=CHM13_chrY_T0000579;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000579:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8339418	8342667	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=CHM13_chrY_T0000579;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000579;transcript_name=CHM13_chrY_T0000579;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000579:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8342668	8342722	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=CHM13_chrY_T0000579;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000579;transcript_name=CHM13_chrY_T0000579;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000579:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8342723	8345061	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=CHM13_chrY_T0000579;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000579;transcript_name=CHM13_chrY_T0000579;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000579:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8345062	8345146	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=CHM13_chrY_T0000579;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000579;transcript_name=CHM13_chrY_T0000579;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000579:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8345147	8347255	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=CHM13_chrY_T0000579;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000579;transcript_name=CHM13_chrY_T0000579;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000579:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8347256	8347427	.	-	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=CHM13_chrY_T0000579;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000579;transcript_name=CHM13_chrY_T0000579;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000579:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8339110	8366897	1000	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=CHM13_chrY_T0000580;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_G0000155;transcript_name=CHM13_chrY_T0000580;gene_name=TTTY18;ID=CHM13_chrY_T0000580;Name=TTTY18
CHM13_chrY	CAT	exon	8339110	8339417	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=CHM13_chrY_T0000580;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000580;transcript_name=CHM13_chrY_T0000580;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000580:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8339418	8339705	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=CHM13_chrY_T0000580;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000580;transcript_name=CHM13_chrY_T0000580;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000580:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8339706	8339924	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=CHM13_chrY_T0000580;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000580;transcript_name=CHM13_chrY_T0000580;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000580:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8339925	8342667	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=CHM13_chrY_T0000580;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000580;transcript_name=CHM13_chrY_T0000580;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000580:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8342668	8342722	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=CHM13_chrY_T0000580;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000580;transcript_name=CHM13_chrY_T0000580;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000580:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8342723	8349762	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=CHM13_chrY_T0000580;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000580;transcript_name=CHM13_chrY_T0000580;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000580:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8349763	8349968	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=CHM13_chrY_T0000580;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000580;transcript_name=CHM13_chrY_T0000580;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000580:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8349969	8350452	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=CHM13_chrY_T0000580;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000580;transcript_name=CHM13_chrY_T0000580;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000580:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8350453	8350530	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=CHM13_chrY_T0000580;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000580;transcript_name=CHM13_chrY_T0000580;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000580:4;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8350531	8366724	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=CHM13_chrY_T0000580;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000580;transcript_name=CHM13_chrY_T0000580;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000580:4;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8366725	8366897	.	-	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=CHM13_chrY_T0000580;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000580;transcript_name=CHM13_chrY_T0000580;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000580:5;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8339110	8341706	1000	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=CHM13_chrY_T0000581;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_G0000155;transcript_name=CHM13_chrY_T0000581;gene_name=TTTY18;ID=CHM13_chrY_T0000581;Name=TTTY18
CHM13_chrY	CAT	exon	8339110	8339417	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=CHM13_chrY_T0000581;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000581;transcript_name=CHM13_chrY_T0000581;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000581:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8339418	8339705	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=CHM13_chrY_T0000581;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000581;transcript_name=CHM13_chrY_T0000581;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000581:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8339706	8339924	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=CHM13_chrY_T0000581;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000581;transcript_name=CHM13_chrY_T0000581;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000581:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8339925	8341506	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=CHM13_chrY_T0000581;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000581;transcript_name=CHM13_chrY_T0000581;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000581:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8341507	8341706	.	-	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=CHM13_chrY_T0000581;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000581;transcript_name=CHM13_chrY_T0000581;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000581:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8343170	8347461	1000	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=CHM13_chrY_T0000583;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_G0000155;transcript_name=CHM13_chrY_T0000583;gene_name=TTTY18;ID=CHM13_chrY_T0000583;Name=TTTY18
CHM13_chrY	CAT	exon	8343170	8343351	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=CHM13_chrY_T0000583;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000583;transcript_name=CHM13_chrY_T0000583;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000583:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8343352	8345061	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=CHM13_chrY_T0000583;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000583;transcript_name=CHM13_chrY_T0000583;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000583:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8345062	8345146	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=CHM13_chrY_T0000583;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000583;transcript_name=CHM13_chrY_T0000583;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000583:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8345147	8347255	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=CHM13_chrY_T0000583;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000583;transcript_name=CHM13_chrY_T0000583;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000583:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8347256	8347461	.	-	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=CHM13_chrY_T0000583;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000583;transcript_name=CHM13_chrY_T0000583;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000583:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8343171	8347464	1000	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=CHM13_chrY_T0000584;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_G0000155;transcript_name=CHM13_chrY_T0000584;gene_name=TTTY18;ID=CHM13_chrY_T0000584;Name=TTTY18
CHM13_chrY	CAT	exon	8343171	8343418	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=CHM13_chrY_T0000584;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000584;transcript_name=CHM13_chrY_T0000584;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000584:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8343419	8345061	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=CHM13_chrY_T0000584;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000584;transcript_name=CHM13_chrY_T0000584;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000584:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8345062	8345146	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=CHM13_chrY_T0000584;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000584;transcript_name=CHM13_chrY_T0000584;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000584:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8345147	8347255	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=CHM13_chrY_T0000584;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000584;transcript_name=CHM13_chrY_T0000584;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000584:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8347256	8347464	.	-	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=CHM13_chrY_T0000584;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000584;transcript_name=CHM13_chrY_T0000584;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000584:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8343173	8351321	1000	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=CHM13_chrY_T0000585;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_G0000155;transcript_name=CHM13_chrY_T0000585;gene_name=TTTY18;ID=CHM13_chrY_T0000585;Name=TTTY18
CHM13_chrY	CAT	exon	8343173	8343351	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=CHM13_chrY_T0000585;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000585;transcript_name=CHM13_chrY_T0000585;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000585:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8343352	8345061	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=CHM13_chrY_T0000585;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000585;transcript_name=CHM13_chrY_T0000585;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000585:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8345062	8345146	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=CHM13_chrY_T0000585;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000585;transcript_name=CHM13_chrY_T0000585;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000585:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8345147	8349762	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=CHM13_chrY_T0000585;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000585;transcript_name=CHM13_chrY_T0000585;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000585:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8349763	8349968	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=CHM13_chrY_T0000585;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000585;transcript_name=CHM13_chrY_T0000585;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000585:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8349969	8350452	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=CHM13_chrY_T0000585;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000585;transcript_name=CHM13_chrY_T0000585;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000585:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8350453	8350530	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=CHM13_chrY_T0000585;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000585;transcript_name=CHM13_chrY_T0000585;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000585:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8350531	8351111	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=CHM13_chrY_T0000585;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000585;transcript_name=CHM13_chrY_T0000585;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000585:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8351112	8351321	.	-	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=CHM13_chrY_T0000585;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000585;transcript_name=CHM13_chrY_T0000585;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000585:4;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8349311	8366912	1000	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=CHM13_chrY_T0000586;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_G0000155;transcript_name=CHM13_chrY_T0000586;gene_name=TTTY18;ID=CHM13_chrY_T0000586;Name=TTTY18
CHM13_chrY	CAT	exon	8349311	8349400	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=CHM13_chrY_T0000586;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000586;transcript_name=CHM13_chrY_T0000586;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000586:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8349401	8349762	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=CHM13_chrY_T0000586;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000586;transcript_name=CHM13_chrY_T0000586;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000586:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8349763	8349968	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=CHM13_chrY_T0000586;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000586;transcript_name=CHM13_chrY_T0000586;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000586:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8349969	8350452	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=CHM13_chrY_T0000586;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000586;transcript_name=CHM13_chrY_T0000586;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000586:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8350453	8350530	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=CHM13_chrY_T0000586;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000586;transcript_name=CHM13_chrY_T0000586;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000586:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8350531	8351111	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=CHM13_chrY_T0000586;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000586;transcript_name=CHM13_chrY_T0000586;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000586:2;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8351112	8351328	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=CHM13_chrY_T0000586;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000586;transcript_name=CHM13_chrY_T0000586;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000586:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8351329	8366724	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=CHM13_chrY_T0000586;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000586;transcript_name=CHM13_chrY_T0000586;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000586:3;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8366725	8366912	.	-	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=CHM13_chrY_T0000586;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000586;transcript_name=CHM13_chrY_T0000586;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000586:4;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8360105	8366931	1000	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=CHM13_chrY_T0000587;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_G0000155;transcript_name=CHM13_chrY_T0000587;gene_name=TTTY18;ID=CHM13_chrY_T0000587;Name=TTTY18
CHM13_chrY	CAT	exon	8360105	8360252	.	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=CHM13_chrY_T0000587;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000587;transcript_name=CHM13_chrY_T0000587;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000587:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8360253	8366724	.	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=CHM13_chrY_T0000587;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000587;transcript_name=CHM13_chrY_T0000587;gene_name=TTTY18;ID=intron:CHM13_chrY_T0000587:0;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8366725	8366931	.	-	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=CHM13_chrY_T0000587;gene_id=CHM13_chrY_G0000155;Parent=CHM13_chrY_T0000587;transcript_name=CHM13_chrY_T0000587;gene_name=TTTY18;ID=exon:CHM13_chrY_T0000587:1;Name=TTTY18;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8360480	8361291	.	+	.	source_gene_common_name=TTTY19;source_gene=ENSG00000232419.1;gene_id=CHM13_chrY_G0000156;gene_biotype=lncRNA;gene_name=TTTY19;gene_sources=liftoff;ID=CHM13_chrY_G0000156;Name=TTTY19
CHM13_chrY	CAT	transcript	8360480	8361291	1000	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=CHM13_chrY_T0000588;gene_id=CHM13_chrY_G0000156;Parent=CHM13_chrY_G0000156;transcript_name=CHM13_chrY_T0000588;gene_name=TTTY19;ID=CHM13_chrY_T0000588;Name=TTTY19
CHM13_chrY	CAT	exon	8360480	8360567	.	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=CHM13_chrY_T0000588;gene_id=CHM13_chrY_G0000156;Parent=CHM13_chrY_T0000588;transcript_name=CHM13_chrY_T0000588;gene_name=TTTY19;ID=exon:CHM13_chrY_T0000588:0;Name=TTTY19;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8360568	8361110	.	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=CHM13_chrY_T0000588;gene_id=CHM13_chrY_G0000156;Parent=CHM13_chrY_T0000588;transcript_name=CHM13_chrY_T0000588;gene_name=TTTY19;ID=intron:CHM13_chrY_T0000588:0;Name=TTTY19;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8361111	8361291	.	+	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=CHM13_chrY_T0000588;gene_id=CHM13_chrY_G0000156;Parent=CHM13_chrY_T0000588;transcript_name=CHM13_chrY_T0000588;gene_name=TTTY19;ID=exon:CHM13_chrY_T0000588:1;Name=TTTY19;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8377782	8395266	.	-	.	source_gene_common_name=ENSG00000309903;source_gene=ENSG00000309903.1;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;gene_id=CHM13_chrY_G0000157;gene_biotype=lncRNA;gene_name=ENSG00000309903;gene_sources=liftoff;ID=CHM13_chrY_G0000157;Name=ENSG00000309903
CHM13_chrY	CAT	transcript	8377782	8380301	1000	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=CHM13_chrY_T0000589;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_G0000157;transcript_name=CHM13_chrY_T0000589;gene_name=ENSG00000309903;ID=CHM13_chrY_T0000589;Name=ENSG00000309903
CHM13_chrY	CAT	exon	8377782	8378098	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=CHM13_chrY_T0000589;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000589;transcript_name=CHM13_chrY_T0000589;gene_name=ENSG00000309903;ID=exon:CHM13_chrY_T0000589:0;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8378099	8378195	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=CHM13_chrY_T0000589;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000589;transcript_name=CHM13_chrY_T0000589;gene_name=ENSG00000309903;ID=intron:CHM13_chrY_T0000589:0;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8378196	8378291	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=CHM13_chrY_T0000589;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000589;transcript_name=CHM13_chrY_T0000589;gene_name=ENSG00000309903;ID=exon:CHM13_chrY_T0000589:1;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8378292	8378381	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=CHM13_chrY_T0000589;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000589;transcript_name=CHM13_chrY_T0000589;gene_name=ENSG00000309903;ID=intron:CHM13_chrY_T0000589:1;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8378382	8378644	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=CHM13_chrY_T0000589;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000589;transcript_name=CHM13_chrY_T0000589;gene_name=ENSG00000309903;ID=exon:CHM13_chrY_T0000589:2;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8378645	8380112	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=CHM13_chrY_T0000589;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000589;transcript_name=CHM13_chrY_T0000589;gene_name=ENSG00000309903;ID=intron:CHM13_chrY_T0000589:2;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8380113	8380301	.	-	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=CHM13_chrY_T0000589;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000589;transcript_name=CHM13_chrY_T0000589;gene_name=ENSG00000309903;ID=exon:CHM13_chrY_T0000589:3;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8377785	8395266	1000	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=CHM13_chrY_T0000590;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_G0000157;transcript_name=CHM13_chrY_T0000590;gene_name=ENSG00000309903;ID=CHM13_chrY_T0000590;Name=ENSG00000309903
CHM13_chrY	CAT	exon	8377785	8378098	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=CHM13_chrY_T0000590;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000590;transcript_name=CHM13_chrY_T0000590;gene_name=ENSG00000309903;ID=exon:CHM13_chrY_T0000590:0;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8378099	8378195	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=CHM13_chrY_T0000590;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000590;transcript_name=CHM13_chrY_T0000590;gene_name=ENSG00000309903;ID=intron:CHM13_chrY_T0000590:0;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8378196	8378291	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=CHM13_chrY_T0000590;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000590;transcript_name=CHM13_chrY_T0000590;gene_name=ENSG00000309903;ID=exon:CHM13_chrY_T0000590:1;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8378292	8378381	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=CHM13_chrY_T0000590;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000590;transcript_name=CHM13_chrY_T0000590;gene_name=ENSG00000309903;ID=intron:CHM13_chrY_T0000590:1;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8378382	8378644	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=CHM13_chrY_T0000590;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000590;transcript_name=CHM13_chrY_T0000590;gene_name=ENSG00000309903;ID=exon:CHM13_chrY_T0000590:2;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8378645	8389378	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=CHM13_chrY_T0000590;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000590;transcript_name=CHM13_chrY_T0000590;gene_name=ENSG00000309903;ID=intron:CHM13_chrY_T0000590:2;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8389379	8389478	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=CHM13_chrY_T0000590;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000590;transcript_name=CHM13_chrY_T0000590;gene_name=ENSG00000309903;ID=exon:CHM13_chrY_T0000590:3;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8389479	8395086	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=CHM13_chrY_T0000590;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000590;transcript_name=CHM13_chrY_T0000590;gene_name=ENSG00000309903;ID=intron:CHM13_chrY_T0000590:3;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8395087	8395266	.	-	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=CHM13_chrY_T0000590;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000590;transcript_name=CHM13_chrY_T0000590;gene_name=ENSG00000309903;ID=exon:CHM13_chrY_T0000590:4;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8378333	8380278	1000	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=CHM13_chrY_T0000591;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_G0000157;transcript_name=CHM13_chrY_T0000591;gene_name=ENSG00000309903;ID=CHM13_chrY_T0000591;Name=ENSG00000309903
CHM13_chrY	CAT	exon	8378333	8378644	.	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=CHM13_chrY_T0000591;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000591;transcript_name=CHM13_chrY_T0000591;gene_name=ENSG00000309903;ID=exon:CHM13_chrY_T0000591:0;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8378645	8380112	.	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=CHM13_chrY_T0000591;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000591;transcript_name=CHM13_chrY_T0000591;gene_name=ENSG00000309903;ID=intron:CHM13_chrY_T0000591:0;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8380113	8380278	.	-	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=CHM13_chrY_T0000591;gene_id=CHM13_chrY_G0000157;Parent=CHM13_chrY_T0000591;transcript_name=CHM13_chrY_T0000591;gene_name=ENSG00000309903;ID=exon:CHM13_chrY_T0000591:1;Name=ENSG00000309903;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8439336	8473486	.	-	.	source_gene_common_name=TTTY11;source_gene=ENSG00000290381.2;gene_id=CHM13_chrY_G0000158;gene_biotype=lncRNA;gene_name=TTTY11;gene_sources=liftoff;ID=CHM13_chrY_G0000158;Name=TTTY11
CHM13_chrY	CAT	transcript	8439336	8473405	1000	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000592;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_G0000158;transcript_name=CHM13_chrY_T0000592;gene_name=TTTY11;ID=CHM13_chrY_T0000592;Name=TTTY11
CHM13_chrY	CAT	exon	8439336	8439432	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000592;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_T0000592;transcript_name=CHM13_chrY_T0000592;gene_name=TTTY11;ID=exon:CHM13_chrY_T0000592:0;Name=TTTY11;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8439433	8439913	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000592;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_T0000592;transcript_name=CHM13_chrY_T0000592;gene_name=TTTY11;ID=intron:CHM13_chrY_T0000592:0;Name=TTTY11;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8439914	8440229	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000592;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_T0000592;transcript_name=CHM13_chrY_T0000592;gene_name=TTTY11;ID=exon:CHM13_chrY_T0000592:1;Name=TTTY11;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8440230	8445025	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000592;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_T0000592;transcript_name=CHM13_chrY_T0000592;gene_name=TTTY11;ID=intron:CHM13_chrY_T0000592:1;Name=TTTY11;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8445026	8445328	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000592;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_T0000592;transcript_name=CHM13_chrY_T0000592;gene_name=TTTY11;ID=exon:CHM13_chrY_T0000592:2;Name=TTTY11;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8445329	8450886	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000592;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_T0000592;transcript_name=CHM13_chrY_T0000592;gene_name=TTTY11;ID=intron:CHM13_chrY_T0000592:2;Name=TTTY11;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8450887	8450970	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000592;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_T0000592;transcript_name=CHM13_chrY_T0000592;gene_name=TTTY11;ID=exon:CHM13_chrY_T0000592:3;Name=TTTY11;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8450971	8473368	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000592;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_T0000592;transcript_name=CHM13_chrY_T0000592;gene_name=TTTY11;ID=intron:CHM13_chrY_T0000592:3;Name=TTTY11;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8473369	8473405	.	-	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000592;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_T0000592;transcript_name=CHM13_chrY_T0000592;gene_name=TTTY11;ID=exon:CHM13_chrY_T0000592:4;Name=TTTY11;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8471499	8473486	1000	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000594;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_G0000158;transcript_name=CHM13_chrY_T0000594;gene_name=TTTY11;ID=CHM13_chrY_T0000594;Name=TTTY11
CHM13_chrY	CAT	exon	8471499	8471952	.	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000594;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_T0000594;transcript_name=CHM13_chrY_T0000594;gene_name=TTTY11;ID=exon:CHM13_chrY_T0000594:0;Name=TTTY11;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8471953	8473368	.	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000594;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_T0000594;transcript_name=CHM13_chrY_T0000594;gene_name=TTTY11;ID=intron:CHM13_chrY_T0000594:0;Name=TTTY11;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8473369	8473486	.	-	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000594;gene_id=CHM13_chrY_G0000158;Parent=CHM13_chrY_T0000594;transcript_name=CHM13_chrY_T0000594;gene_name=TTTY11;ID=exon:CHM13_chrY_T0000594:1;Name=TTTY11;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8445026	8445328	.	-	.	source_gene_common_name=TTTY11;source_gene=ENSG00000180910.9;gene_id=CHM13_chrY_G0000159;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TTTY11;gene_sources=liftoff;ID=CHM13_chrY_G0000159;Name=TTTY11
CHM13_chrY	CAT	transcript	8445026	8445328	1000	-	.	source_transcript=ENST00000651367.1;source_transcript_name=TTTY11-201;source_gene=ENSG00000180910.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000180910.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000651367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000593;gene_id=CHM13_chrY_G0000159;Parent=CHM13_chrY_G0000159;transcript_name=CHM13_chrY_T0000593;gene_name=TTTY11;ID=CHM13_chrY_T0000593;Name=TTTY11
CHM13_chrY	CAT	exon	8445026	8445328	.	-	.	source_transcript=ENST00000651367.1;source_transcript_name=TTTY11-201;source_gene=ENSG00000180910.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000180910.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000651367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=CHM13_chrY_T0000593;gene_id=CHM13_chrY_G0000159;Parent=CHM13_chrY_T0000593;transcript_name=CHM13_chrY_T0000593;gene_name=TTTY11;ID=exon:CHM13_chrY_T0000593:0;Name=TTTY11;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8557307	8559380	.	-	.	source_gene_common_name=ENSG00000228207;source_gene=ENSG00000228207.1;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;gene_id=CHM13_chrY_G0000160;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000228207;gene_sources=liftoff;ID=CHM13_chrY_G0000160;Name=ENSG00000228207
CHM13_chrY	CAT	transcript	8557307	8559380	1000	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=CHM13_chrY_T0000595;gene_id=CHM13_chrY_G0000160;Parent=CHM13_chrY_G0000160;transcript_name=CHM13_chrY_T0000595;gene_name=ENSG00000228207;ID=CHM13_chrY_T0000595;Name=ENSG00000228207
CHM13_chrY	CAT	exon	8557307	8557362	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=CHM13_chrY_T0000595;gene_id=CHM13_chrY_G0000160;Parent=CHM13_chrY_T0000595;transcript_name=CHM13_chrY_T0000595;gene_name=ENSG00000228207;ID=exon:CHM13_chrY_T0000595:0;Name=ENSG00000228207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8557363	8557473	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=CHM13_chrY_T0000595;gene_id=CHM13_chrY_G0000160;Parent=CHM13_chrY_T0000595;transcript_name=CHM13_chrY_T0000595;gene_name=ENSG00000228207;ID=intron:CHM13_chrY_T0000595:0;Name=ENSG00000228207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8557474	8557617	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=CHM13_chrY_T0000595;gene_id=CHM13_chrY_G0000160;Parent=CHM13_chrY_T0000595;transcript_name=CHM13_chrY_T0000595;gene_name=ENSG00000228207;ID=exon:CHM13_chrY_T0000595:1;Name=ENSG00000228207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8557618	8557704	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=CHM13_chrY_T0000595;gene_id=CHM13_chrY_G0000160;Parent=CHM13_chrY_T0000595;transcript_name=CHM13_chrY_T0000595;gene_name=ENSG00000228207;ID=intron:CHM13_chrY_T0000595:1;Name=ENSG00000228207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8557705	8557843	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=CHM13_chrY_T0000595;gene_id=CHM13_chrY_G0000160;Parent=CHM13_chrY_T0000595;transcript_name=CHM13_chrY_T0000595;gene_name=ENSG00000228207;ID=exon:CHM13_chrY_T0000595:2;Name=ENSG00000228207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8557844	8559094	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=CHM13_chrY_T0000595;gene_id=CHM13_chrY_G0000160;Parent=CHM13_chrY_T0000595;transcript_name=CHM13_chrY_T0000595;gene_name=ENSG00000228207;ID=intron:CHM13_chrY_T0000595:2;Name=ENSG00000228207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8559095	8559380	.	-	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=CHM13_chrY_T0000595;gene_id=CHM13_chrY_G0000160;Parent=CHM13_chrY_T0000595;transcript_name=CHM13_chrY_T0000595;gene_name=ENSG00000228207;ID=exon:CHM13_chrY_T0000595:3;Name=ENSG00000228207;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8562328	8572177	.	+	.	source_gene_common_name=ENSG00000173357;source_gene=ENSG00000173357.13;gene_id=CHM13_chrY_G0000161;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000173357;gene_sources=liftoff;ID=CHM13_chrY_G0000161;Name=ENSG00000173357
CHM13_chrY	CAT	transcript	8562328	8572177	1000	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_G0000161;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=CHM13_chrY_T0000596;Name=ENSG00000173357
CHM13_chrY	CAT	exon	8562328	8562436	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:CHM13_chrY_T0000596:0;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8562437	8563197	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:CHM13_chrY_T0000596:0;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8563198	8563301	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:CHM13_chrY_T0000596:1;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8563302	8565986	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:CHM13_chrY_T0000596:1;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8565987	8566164	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:CHM13_chrY_T0000596:2;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8566165	8568049	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:CHM13_chrY_T0000596:2;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8568050	8568202	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:CHM13_chrY_T0000596:3;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8568203	8570196	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:CHM13_chrY_T0000596:3;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8570197	8570308	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:CHM13_chrY_T0000596:4;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8570309	8571187	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:CHM13_chrY_T0000596:4;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8571188	8571298	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:CHM13_chrY_T0000596:5;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8571299	8571379	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:CHM13_chrY_T0000596:5;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8571380	8571468	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:CHM13_chrY_T0000596:6;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8571469	8571874	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=intron:CHM13_chrY_T0000596:6;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8571875	8572177	.	+	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=CHM13_chrY_T0000596;gene_id=CHM13_chrY_G0000161;Parent=CHM13_chrY_T0000596;transcript_name=CHM13_chrY_T0000596;gene_name=ENSG00000173357;ID=exon:CHM13_chrY_T0000596:7;Name=ENSG00000173357;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8566052	8570259	.	+	.	source_gene_common_name=ENSG00000290342;source_gene=ENSG00000290342.1;gene_id=CHM13_chrY_G0000162;gene_biotype=lncRNA;gene_name=ENSG00000290342;gene_sources=liftoff;ID=CHM13_chrY_G0000162;Name=ENSG00000290342
CHM13_chrY	CAT	transcript	8566052	8570259	1000	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=CHM13_chrY_T0000597;gene_id=CHM13_chrY_G0000162;Parent=CHM13_chrY_G0000162;transcript_name=CHM13_chrY_T0000597;gene_name=ENSG00000290342;ID=CHM13_chrY_T0000597;Name=ENSG00000290342
CHM13_chrY	CAT	exon	8566052	8566164	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=CHM13_chrY_T0000597;gene_id=CHM13_chrY_G0000162;Parent=CHM13_chrY_T0000597;transcript_name=CHM13_chrY_T0000597;gene_name=ENSG00000290342;ID=exon:CHM13_chrY_T0000597:0;Name=ENSG00000290342;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8566165	8568049	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=CHM13_chrY_T0000597;gene_id=CHM13_chrY_G0000162;Parent=CHM13_chrY_T0000597;transcript_name=CHM13_chrY_T0000597;gene_name=ENSG00000290342;ID=intron:CHM13_chrY_T0000597:0;Name=ENSG00000290342;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8568050	8568202	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=CHM13_chrY_T0000597;gene_id=CHM13_chrY_G0000162;Parent=CHM13_chrY_T0000597;transcript_name=CHM13_chrY_T0000597;gene_name=ENSG00000290342;ID=exon:CHM13_chrY_T0000597:1;Name=ENSG00000290342;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8568203	8570196	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=CHM13_chrY_T0000597;gene_id=CHM13_chrY_G0000162;Parent=CHM13_chrY_T0000597;transcript_name=CHM13_chrY_T0000597;gene_name=ENSG00000290342;ID=intron:CHM13_chrY_T0000597:1;Name=ENSG00000290342;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8570197	8570259	.	+	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=CHM13_chrY_T0000597;gene_id=CHM13_chrY_G0000162;Parent=CHM13_chrY_T0000597;transcript_name=CHM13_chrY_T0000597;gene_name=ENSG00000290342;ID=exon:CHM13_chrY_T0000597:2;Name=ENSG00000290342;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8571375	8578807	.	-	.	source_gene_common_name=ENSG00000301122;source_gene=ENSG00000301122.1;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;gene_id=CHM13_chrY_G0000163;gene_biotype=lncRNA;gene_name=ENSG00000301122;gene_sources=liftoff;ID=CHM13_chrY_G0000163;Name=ENSG00000301122
CHM13_chrY	CAT	transcript	8571375	8574915	1000	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=299.923;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=CHM13_chrY_T0000598;gene_id=CHM13_chrY_G0000163;Parent=CHM13_chrY_G0000163;transcript_name=CHM13_chrY_T0000598;gene_name=ENSG00000301122;ID=CHM13_chrY_T0000598;Name=ENSG00000301122
CHM13_chrY	CAT	exon	8571375	8572147	.	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=CHM13_chrY_T0000598;gene_id=CHM13_chrY_G0000163;Parent=CHM13_chrY_T0000598;transcript_name=CHM13_chrY_T0000598;gene_name=ENSG00000301122;ID=exon:CHM13_chrY_T0000598:0;Name=ENSG00000301122;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8572148	8574389	.	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=CHM13_chrY_T0000598;gene_id=CHM13_chrY_G0000163;Parent=CHM13_chrY_T0000598;transcript_name=CHM13_chrY_T0000598;gene_name=ENSG00000301122;ID=intron:CHM13_chrY_T0000598:0;Name=ENSG00000301122;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8574390	8574915	.	-	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=CHM13_chrY_T0000598;gene_id=CHM13_chrY_G0000163;Parent=CHM13_chrY_T0000598;transcript_name=CHM13_chrY_T0000598;gene_name=ENSG00000301122;ID=exon:CHM13_chrY_T0000598:1;Name=ENSG00000301122;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8571781	8578807	1000	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=299.906;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=CHM13_chrY_T0000599;gene_id=CHM13_chrY_G0000163;Parent=CHM13_chrY_G0000163;transcript_name=CHM13_chrY_T0000599;gene_name=ENSG00000301122;ID=CHM13_chrY_T0000599;Name=ENSG00000301122
CHM13_chrY	CAT	exon	8571781	8572147	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=299.906;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=CHM13_chrY_T0000599;gene_id=CHM13_chrY_G0000163;Parent=CHM13_chrY_T0000599;transcript_name=CHM13_chrY_T0000599;gene_name=ENSG00000301122;ID=exon:CHM13_chrY_T0000599:0;Name=ENSG00000301122;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8572148	8574389	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=299.906;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=CHM13_chrY_T0000599;gene_id=CHM13_chrY_G0000163;Parent=CHM13_chrY_T0000599;transcript_name=CHM13_chrY_T0000599;gene_name=ENSG00000301122;ID=intron:CHM13_chrY_T0000599:0;Name=ENSG00000301122;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8574390	8574967	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=299.906;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=CHM13_chrY_T0000599;gene_id=CHM13_chrY_G0000163;Parent=CHM13_chrY_T0000599;transcript_name=CHM13_chrY_T0000599;gene_name=ENSG00000301122;ID=exon:CHM13_chrY_T0000599:1;Name=ENSG00000301122;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8574968	8578691	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=299.906;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=CHM13_chrY_T0000599;gene_id=CHM13_chrY_G0000163;Parent=CHM13_chrY_T0000599;transcript_name=CHM13_chrY_T0000599;gene_name=ENSG00000301122;ID=intron:CHM13_chrY_T0000599:1;Name=ENSG00000301122;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8578692	8578807	.	-	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=299.906;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=CHM13_chrY_T0000599;gene_id=CHM13_chrY_G0000163;Parent=CHM13_chrY_T0000599;transcript_name=CHM13_chrY_T0000599;gene_name=ENSG00000301122;ID=exon:CHM13_chrY_T0000599:2;Name=ENSG00000301122;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8587173	8587558	.	-	.	source_gene_common_name=ENSG00000273731;source_gene=ENSG00000273731.1;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;gene_id=CHM13_chrY_G0000164;gene_biotype=processed_pseudogene;gene_name=ENSG00000273731;gene_sources=liftoff;ID=CHM13_chrY_G0000164;Name=ENSG00000273731
CHM13_chrY	CAT	transcript	8587173	8587558	1000	-	.	source_transcript=ENST00000614700.1;source_transcript_name=ENST00000614700;source_gene=ENSG00000273731.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273731.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614700.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273731;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;transcript_id=CHM13_chrY_T0000600;gene_id=CHM13_chrY_G0000164;Parent=CHM13_chrY_G0000164;transcript_name=CHM13_chrY_T0000600;gene_name=ENSG00000273731;ID=CHM13_chrY_T0000600;Name=ENSG00000273731
CHM13_chrY	CAT	exon	8587173	8587558	.	-	.	source_transcript=ENST00000614700.1;source_transcript_name=ENST00000614700;source_gene=ENSG00000273731.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273731.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614700.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273731;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;transcript_id=CHM13_chrY_T0000600;gene_id=CHM13_chrY_G0000164;Parent=CHM13_chrY_T0000600;transcript_name=CHM13_chrY_T0000600;gene_name=ENSG00000273731;ID=exon:CHM13_chrY_T0000600:0;Name=ENSG00000273731;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8627863	8630207	.	-	.	source_gene_common_name=ENSG00000230025;source_gene=ENSG00000230025.1;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;gene_id=CHM13_chrY_G0000165;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000230025;gene_sources=liftoff;ID=CHM13_chrY_G0000165;Name=ENSG00000230025
CHM13_chrY	CAT	transcript	8627863	8630207	1000	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=CHM13_chrY_T0000601;gene_id=CHM13_chrY_G0000165;Parent=CHM13_chrY_G0000165;transcript_name=CHM13_chrY_T0000601;gene_name=ENSG00000230025;ID=CHM13_chrY_T0000601;Name=ENSG00000230025
CHM13_chrY	CAT	exon	8627863	8628006	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=CHM13_chrY_T0000601;gene_id=CHM13_chrY_G0000165;Parent=CHM13_chrY_T0000601;transcript_name=CHM13_chrY_T0000601;gene_name=ENSG00000230025;ID=exon:CHM13_chrY_T0000601:0;Name=ENSG00000230025;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8628007	8628098	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=CHM13_chrY_T0000601;gene_id=CHM13_chrY_G0000165;Parent=CHM13_chrY_T0000601;transcript_name=CHM13_chrY_T0000601;gene_name=ENSG00000230025;ID=intron:CHM13_chrY_T0000601:0;Name=ENSG00000230025;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8628099	8628143	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=CHM13_chrY_T0000601;gene_id=CHM13_chrY_G0000165;Parent=CHM13_chrY_T0000601;transcript_name=CHM13_chrY_T0000601;gene_name=ENSG00000230025;ID=exon:CHM13_chrY_T0000601:1;Name=ENSG00000230025;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8628144	8629838	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=CHM13_chrY_T0000601;gene_id=CHM13_chrY_G0000165;Parent=CHM13_chrY_T0000601;transcript_name=CHM13_chrY_T0000601;gene_name=ENSG00000230025;ID=intron:CHM13_chrY_T0000601:1;Name=ENSG00000230025;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8629839	8630207	.	-	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=CHM13_chrY_T0000601;gene_id=CHM13_chrY_G0000165;Parent=CHM13_chrY_T0000601;transcript_name=CHM13_chrY_T0000601;gene_name=ENSG00000230025;ID=exon:CHM13_chrY_T0000601:2;Name=ENSG00000230025;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8686706	8696104	.	+	.	source_gene_common_name=OFD1P3Y;source_gene=ENSG00000231988.1;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;gene_id=CHM13_chrY_G0000166;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P3Y;gene_sources=liftoff;ID=CHM13_chrY_G0000166;Name=OFD1P3Y
CHM13_chrY	CAT	transcript	8686706	8696104	1000	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=CHM13_chrY_T0000602;gene_id=CHM13_chrY_G0000166;Parent=CHM13_chrY_G0000166;transcript_name=CHM13_chrY_T0000602;gene_name=OFD1P3Y;ID=CHM13_chrY_T0000602;Name=OFD1P3Y
CHM13_chrY	CAT	exon	8686706	8686842	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=CHM13_chrY_T0000602;gene_id=CHM13_chrY_G0000166;Parent=CHM13_chrY_T0000602;transcript_name=CHM13_chrY_T0000602;gene_name=OFD1P3Y;ID=exon:CHM13_chrY_T0000602:0;Name=OFD1P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8686843	8687166	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=CHM13_chrY_T0000602;gene_id=CHM13_chrY_G0000166;Parent=CHM13_chrY_T0000602;transcript_name=CHM13_chrY_T0000602;gene_name=OFD1P3Y;ID=intron:CHM13_chrY_T0000602:0;Name=OFD1P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8687167	8687341	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=CHM13_chrY_T0000602;gene_id=CHM13_chrY_G0000166;Parent=CHM13_chrY_T0000602;transcript_name=CHM13_chrY_T0000602;gene_name=OFD1P3Y;ID=exon:CHM13_chrY_T0000602:1;Name=OFD1P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8687342	8690788	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=CHM13_chrY_T0000602;gene_id=CHM13_chrY_G0000166;Parent=CHM13_chrY_T0000602;transcript_name=CHM13_chrY_T0000602;gene_name=OFD1P3Y;ID=intron:CHM13_chrY_T0000602:1;Name=OFD1P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8690789	8690904	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=CHM13_chrY_T0000602;gene_id=CHM13_chrY_G0000166;Parent=CHM13_chrY_T0000602;transcript_name=CHM13_chrY_T0000602;gene_name=OFD1P3Y;ID=exon:CHM13_chrY_T0000602:2;Name=OFD1P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8690905	8692572	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=CHM13_chrY_T0000602;gene_id=CHM13_chrY_G0000166;Parent=CHM13_chrY_T0000602;transcript_name=CHM13_chrY_T0000602;gene_name=OFD1P3Y;ID=intron:CHM13_chrY_T0000602:2;Name=OFD1P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8692573	8692646	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=CHM13_chrY_T0000602;gene_id=CHM13_chrY_G0000166;Parent=CHM13_chrY_T0000602;transcript_name=CHM13_chrY_T0000602;gene_name=OFD1P3Y;ID=exon:CHM13_chrY_T0000602:3;Name=OFD1P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8692647	8693791	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=CHM13_chrY_T0000602;gene_id=CHM13_chrY_G0000166;Parent=CHM13_chrY_T0000602;transcript_name=CHM13_chrY_T0000602;gene_name=OFD1P3Y;ID=intron:CHM13_chrY_T0000602:3;Name=OFD1P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8693792	8693883	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=CHM13_chrY_T0000602;gene_id=CHM13_chrY_G0000166;Parent=CHM13_chrY_T0000602;transcript_name=CHM13_chrY_T0000602;gene_name=OFD1P3Y;ID=exon:CHM13_chrY_T0000602:4;Name=OFD1P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8693884	8695915	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=CHM13_chrY_T0000602;gene_id=CHM13_chrY_G0000166;Parent=CHM13_chrY_T0000602;transcript_name=CHM13_chrY_T0000602;gene_name=OFD1P3Y;ID=intron:CHM13_chrY_T0000602:4;Name=OFD1P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8695916	8696104	.	+	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=CHM13_chrY_T0000602;gene_id=CHM13_chrY_G0000166;Parent=CHM13_chrY_T0000602;transcript_name=CHM13_chrY_T0000602;gene_name=OFD1P3Y;ID=exon:CHM13_chrY_T0000602:5;Name=OFD1P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8772223	8773840	.	-	.	source_gene_common_name=CDY3P;source_gene=ENSG00000232235.1;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;gene_id=CHM13_chrY_G0000167;gene_biotype=processed_pseudogene;gene_name=CDY3P;gene_sources=liftoff;ID=CHM13_chrY_G0000167;Name=CDY3P
CHM13_chrY	CAT	transcript	8772223	8773840	1000	-	.	source_transcript=ENST00000454543.1;source_transcript_name=CDY3P-201;source_gene=ENSG00000232235.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232235.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454543.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY3P;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;transcript_id=CHM13_chrY_T0000603;gene_id=CHM13_chrY_G0000167;Parent=CHM13_chrY_G0000167;transcript_name=CHM13_chrY_T0000603;gene_name=CDY3P;ID=CHM13_chrY_T0000603;Name=CDY3P
CHM13_chrY	CAT	exon	8772223	8773840	.	-	.	source_transcript=ENST00000454543.1;source_transcript_name=CDY3P-201;source_gene=ENSG00000232235.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232235.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454543.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY3P;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;transcript_id=CHM13_chrY_T0000603;gene_id=CHM13_chrY_G0000167;Parent=CHM13_chrY_T0000603;transcript_name=CHM13_chrY_T0000603;gene_name=CDY3P;ID=exon:CHM13_chrY_T0000603:0;Name=CDY3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8789832	8791941	.	+	.	source_gene_common_name=USP9YP22;source_gene=ENSG00000224408.1;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;gene_id=CHM13_chrY_G0000168;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP22;gene_sources=liftoff;ID=CHM13_chrY_G0000168;Name=USP9YP22
CHM13_chrY	CAT	transcript	8789832	8791941	1000	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=CHM13_chrY_T0000604;gene_id=CHM13_chrY_G0000168;Parent=CHM13_chrY_G0000168;transcript_name=CHM13_chrY_T0000604;gene_name=USP9YP22;ID=CHM13_chrY_T0000604;Name=USP9YP22
CHM13_chrY	CAT	exon	8789832	8789923	.	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=CHM13_chrY_T0000604;gene_id=CHM13_chrY_G0000168;Parent=CHM13_chrY_T0000604;transcript_name=CHM13_chrY_T0000604;gene_name=USP9YP22;ID=exon:CHM13_chrY_T0000604:0;Name=USP9YP22;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8789924	8791739	.	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=CHM13_chrY_T0000604;gene_id=CHM13_chrY_G0000168;Parent=CHM13_chrY_T0000604;transcript_name=CHM13_chrY_T0000604;gene_name=USP9YP22;ID=intron:CHM13_chrY_T0000604:0;Name=USP9YP22;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8791740	8791941	.	+	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=CHM13_chrY_T0000604;gene_id=CHM13_chrY_G0000168;Parent=CHM13_chrY_T0000604;transcript_name=CHM13_chrY_T0000604;gene_name=USP9YP22;ID=exon:CHM13_chrY_T0000604:1;Name=USP9YP22;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8795767	8810759	.	-	.	source_gene_common_name=USP9YP4;source_gene=ENSG00000238154.1;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;gene_id=CHM13_chrY_G0000169;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP4;gene_sources=liftoff;ID=CHM13_chrY_G0000169;Name=USP9YP4
CHM13_chrY	CAT	transcript	8795767	8810759	1000	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=CHM13_chrY_T0000605;gene_id=CHM13_chrY_G0000169;Parent=CHM13_chrY_G0000169;transcript_name=CHM13_chrY_T0000605;gene_name=USP9YP4;ID=CHM13_chrY_T0000605;Name=USP9YP4
CHM13_chrY	CAT	exon	8795767	8795890	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=CHM13_chrY_T0000605;gene_id=CHM13_chrY_G0000169;Parent=CHM13_chrY_T0000605;transcript_name=CHM13_chrY_T0000605;gene_name=USP9YP4;ID=exon:CHM13_chrY_T0000605:0;Name=USP9YP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8795891	8796325	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=CHM13_chrY_T0000605;gene_id=CHM13_chrY_G0000169;Parent=CHM13_chrY_T0000605;transcript_name=CHM13_chrY_T0000605;gene_name=USP9YP4;ID=intron:CHM13_chrY_T0000605:0;Name=USP9YP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8796326	8797210	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=CHM13_chrY_T0000605;gene_id=CHM13_chrY_G0000169;Parent=CHM13_chrY_T0000605;transcript_name=CHM13_chrY_T0000605;gene_name=USP9YP4;ID=exon:CHM13_chrY_T0000605:1;Name=USP9YP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8797211	8799729	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=CHM13_chrY_T0000605;gene_id=CHM13_chrY_G0000169;Parent=CHM13_chrY_T0000605;transcript_name=CHM13_chrY_T0000605;gene_name=USP9YP4;ID=intron:CHM13_chrY_T0000605:1;Name=USP9YP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8799730	8799853	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=CHM13_chrY_T0000605;gene_id=CHM13_chrY_G0000169;Parent=CHM13_chrY_T0000605;transcript_name=CHM13_chrY_T0000605;gene_name=USP9YP4;ID=exon:CHM13_chrY_T0000605:2;Name=USP9YP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8799854	8805229	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=CHM13_chrY_T0000605;gene_id=CHM13_chrY_G0000169;Parent=CHM13_chrY_T0000605;transcript_name=CHM13_chrY_T0000605;gene_name=USP9YP4;ID=intron:CHM13_chrY_T0000605:2;Name=USP9YP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8805230	8805419	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=CHM13_chrY_T0000605;gene_id=CHM13_chrY_G0000169;Parent=CHM13_chrY_T0000605;transcript_name=CHM13_chrY_T0000605;gene_name=USP9YP4;ID=exon:CHM13_chrY_T0000605:3;Name=USP9YP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8805420	8807531	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=CHM13_chrY_T0000605;gene_id=CHM13_chrY_G0000169;Parent=CHM13_chrY_T0000605;transcript_name=CHM13_chrY_T0000605;gene_name=USP9YP4;ID=intron:CHM13_chrY_T0000605:3;Name=USP9YP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8807532	8807738	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=CHM13_chrY_T0000605;gene_id=CHM13_chrY_G0000169;Parent=CHM13_chrY_T0000605;transcript_name=CHM13_chrY_T0000605;gene_name=USP9YP4;ID=exon:CHM13_chrY_T0000605:4;Name=USP9YP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8807739	8810544	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=CHM13_chrY_T0000605;gene_id=CHM13_chrY_G0000169;Parent=CHM13_chrY_T0000605;transcript_name=CHM13_chrY_T0000605;gene_name=USP9YP4;ID=intron:CHM13_chrY_T0000605:4;Name=USP9YP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8810545	8810759	.	-	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=CHM13_chrY_T0000605;gene_id=CHM13_chrY_G0000169;Parent=CHM13_chrY_T0000605;transcript_name=CHM13_chrY_T0000605;gene_name=USP9YP4;ID=exon:CHM13_chrY_T0000605:5;Name=USP9YP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8837069	8837401	.	+	.	source_gene_common_name=ELOCP4;source_gene=ENSG00000232924.1;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;gene_id=CHM13_chrY_G0000170;gene_biotype=processed_pseudogene;gene_name=ELOCP4;gene_sources=liftoff;ID=CHM13_chrY_G0000170;Name=ELOCP4
CHM13_chrY	CAT	transcript	8837069	8837401	1000	+	.	source_transcript=ENST00000420090.1;source_transcript_name=ELOCP4-201;source_gene=ENSG00000232924.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232924.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP4;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;transcript_id=CHM13_chrY_T0000606;gene_id=CHM13_chrY_G0000170;Parent=CHM13_chrY_G0000170;transcript_name=CHM13_chrY_T0000606;gene_name=ELOCP4;ID=CHM13_chrY_T0000606;Name=ELOCP4
CHM13_chrY	CAT	exon	8837069	8837401	.	+	.	source_transcript=ENST00000420090.1;source_transcript_name=ELOCP4-201;source_gene=ENSG00000232924.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232924.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP4;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;transcript_id=CHM13_chrY_T0000606;gene_id=CHM13_chrY_G0000170;Parent=CHM13_chrY_T0000606;transcript_name=CHM13_chrY_T0000606;gene_name=ELOCP4;ID=exon:CHM13_chrY_T0000606:0;Name=ELOCP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8898403	8917673	.	+	.	source_gene_common_name=ENSG00000299745;source_gene=ENSG00000299745.1;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;gene_id=CHM13_chrY_G0000171;gene_biotype=lncRNA;gene_name=ENSG00000299745;gene_sources=liftoff;ID=CHM13_chrY_G0000171;Name=ENSG00000299745
CHM13_chrY	CAT	transcript	8898403	8917673	1000	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=CHM13_chrY_T0000607;gene_id=CHM13_chrY_G0000171;Parent=CHM13_chrY_G0000171;transcript_name=CHM13_chrY_T0000607;gene_name=ENSG00000299745;ID=CHM13_chrY_T0000607;Name=ENSG00000299745
CHM13_chrY	CAT	exon	8898403	8898715	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=CHM13_chrY_T0000607;gene_id=CHM13_chrY_G0000171;Parent=CHM13_chrY_T0000607;transcript_name=CHM13_chrY_T0000607;gene_name=ENSG00000299745;ID=exon:CHM13_chrY_T0000607:0;Name=ENSG00000299745;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8898716	8899960	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=CHM13_chrY_T0000607;gene_id=CHM13_chrY_G0000171;Parent=CHM13_chrY_T0000607;transcript_name=CHM13_chrY_T0000607;gene_name=ENSG00000299745;ID=intron:CHM13_chrY_T0000607:0;Name=ENSG00000299745;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8899961	8900035	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=CHM13_chrY_T0000607;gene_id=CHM13_chrY_G0000171;Parent=CHM13_chrY_T0000607;transcript_name=CHM13_chrY_T0000607;gene_name=ENSG00000299745;ID=exon:CHM13_chrY_T0000607:1;Name=ENSG00000299745;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8900036	8910703	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=CHM13_chrY_T0000607;gene_id=CHM13_chrY_G0000171;Parent=CHM13_chrY_T0000607;transcript_name=CHM13_chrY_T0000607;gene_name=ENSG00000299745;ID=intron:CHM13_chrY_T0000607:1;Name=ENSG00000299745;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8910704	8910816	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=CHM13_chrY_T0000607;gene_id=CHM13_chrY_G0000171;Parent=CHM13_chrY_T0000607;transcript_name=CHM13_chrY_T0000607;gene_name=ENSG00000299745;ID=exon:CHM13_chrY_T0000607:2;Name=ENSG00000299745;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8910817	8914405	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=CHM13_chrY_T0000607;gene_id=CHM13_chrY_G0000171;Parent=CHM13_chrY_T0000607;transcript_name=CHM13_chrY_T0000607;gene_name=ENSG00000299745;ID=intron:CHM13_chrY_T0000607:2;Name=ENSG00000299745;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8914406	8914573	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=CHM13_chrY_T0000607;gene_id=CHM13_chrY_G0000171;Parent=CHM13_chrY_T0000607;transcript_name=CHM13_chrY_T0000607;gene_name=ENSG00000299745;ID=exon:CHM13_chrY_T0000607:3;Name=ENSG00000299745;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8914574	8917306	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=CHM13_chrY_T0000607;gene_id=CHM13_chrY_G0000171;Parent=CHM13_chrY_T0000607;transcript_name=CHM13_chrY_T0000607;gene_name=ENSG00000299745;ID=intron:CHM13_chrY_T0000607:3;Name=ENSG00000299745;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8917307	8917673	.	+	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=CHM13_chrY_T0000607;gene_id=CHM13_chrY_G0000171;Parent=CHM13_chrY_T0000607;transcript_name=CHM13_chrY_T0000607;gene_name=ENSG00000299745;ID=exon:CHM13_chrY_T0000607:4;Name=ENSG00000299745;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8914778	8931046	.	-	.	source_gene_common_name=ENSG00000299768;source_gene=ENSG00000299768.1;gene_id=CHM13_chrY_G0000172;gene_biotype=lncRNA;gene_name=ENSG00000299768;gene_sources=liftoff;ID=CHM13_chrY_G0000172;Name=ENSG00000299768
CHM13_chrY	CAT	transcript	8914778	8931046	1000	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_G0000172;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=CHM13_chrY_T0000608;Name=ENSG00000299768
CHM13_chrY	CAT	exon	8914778	8914995	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000608:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8914996	8918002	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000608:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8918003	8918091	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000608:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8918092	8919870	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000608:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8919871	8919981	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000608:2;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8919982	8920936	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000608:2;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8920937	8921051	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000608:3;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8921052	8923099	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000608:3;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8923100	8923252	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000608:4;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8923253	8925152	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000608:4;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8925153	8925330	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000608:5;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8925331	8928345	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000608:5;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928346	8928449	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000608:6;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8928450	8928923	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000608:6;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928924	8929036	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000608:7;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8929037	8930891	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000608:7;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8930892	8931046	.	-	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000608;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000608;transcript_name=CHM13_chrY_T0000608;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000608:8;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8914780	8931004	1000	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_G0000172;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=CHM13_chrY_T0000609;Name=ENSG00000299768
CHM13_chrY	CAT	exon	8914780	8914995	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000609:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8914996	8918002	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000609:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8918003	8918091	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000609:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8918092	8919870	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000609:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8919871	8919981	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000609:2;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8919982	8923099	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000609:2;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8923100	8923252	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000609:3;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8923253	8925152	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000609:3;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8925153	8925330	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000609:4;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8925331	8928345	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000609:4;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928346	8928449	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000609:5;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8928450	8928923	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000609:5;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928924	8929036	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000609:6;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8929037	8930891	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000609:6;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8930892	8931004	.	-	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000609;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000609;transcript_name=CHM13_chrY_T0000609;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000609:7;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8914780	8930966	1000	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_G0000172;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=CHM13_chrY_T0000610;Name=ENSG00000299768
CHM13_chrY	CAT	exon	8914780	8914995	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000610:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8914996	8918002	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000610:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8918003	8918091	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000610:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8918092	8918176	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000610:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8918177	8918287	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000610:2;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8918288	8919870	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000610:2;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8919871	8919981	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000610:3;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8919982	8920936	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000610:3;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8920937	8921051	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000610:4;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8921052	8923099	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000610:4;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8923100	8923252	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000610:5;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8923253	8925152	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000610:5;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8925153	8925330	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000610:6;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8925331	8928345	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000610:6;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928346	8928449	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000610:7;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8928450	8928923	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000610:7;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928924	8929036	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000610:8;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8929037	8930837	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000610:8;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8930838	8930966	.	-	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000610;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000610;transcript_name=CHM13_chrY_T0000610;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000610:9;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8914780	8931004	1000	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_G0000172;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=CHM13_chrY_T0000611;Name=ENSG00000299768
CHM13_chrY	CAT	exon	8914780	8914995	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000611:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8914996	8918002	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000611:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8918003	8918091	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000611:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8918092	8918176	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000611:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8918177	8918287	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000611:2;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8918288	8919870	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000611:2;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8919871	8919981	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000611:3;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8919982	8920936	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000611:3;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8920937	8921051	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000611:4;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8921052	8923099	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000611:4;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8923100	8923252	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000611:5;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8923253	8925152	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000611:5;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8925153	8925330	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000611:6;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8925331	8928345	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000611:6;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928346	8928449	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000611:7;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8928450	8928923	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000611:7;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928924	8929036	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000611:8;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8929037	8930891	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000611:8;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8930892	8931004	.	-	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000611;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000611;transcript_name=CHM13_chrY_T0000611;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000611:9;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8919622	8931029	1000	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000613;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_G0000172;transcript_name=CHM13_chrY_T0000613;gene_name=ENSG00000299768;ID=CHM13_chrY_T0000613;Name=ENSG00000299768
CHM13_chrY	CAT	exon	8919622	8921051	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000613;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000613;transcript_name=CHM13_chrY_T0000613;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000613:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8921052	8923099	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000613;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000613;transcript_name=CHM13_chrY_T0000613;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000613:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8923100	8923252	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000613;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000613;transcript_name=CHM13_chrY_T0000613;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000613:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8923253	8925152	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000613;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000613;transcript_name=CHM13_chrY_T0000613;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000613:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8925153	8925330	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000613;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000613;transcript_name=CHM13_chrY_T0000613;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000613:2;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8925331	8928345	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000613;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000613;transcript_name=CHM13_chrY_T0000613;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000613:2;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928346	8928449	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000613;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000613;transcript_name=CHM13_chrY_T0000613;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000613:3;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8928450	8928923	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000613;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000613;transcript_name=CHM13_chrY_T0000613;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000613:3;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928924	8929036	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000613;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000613;transcript_name=CHM13_chrY_T0000613;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000613:4;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8929037	8930891	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000613;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000613;transcript_name=CHM13_chrY_T0000613;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000613:4;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8930892	8931029	.	-	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000613;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000613;transcript_name=CHM13_chrY_T0000613;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000613:5;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8924415	8931029	1000	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000614;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_G0000172;transcript_name=CHM13_chrY_T0000614;gene_name=ENSG00000299768;ID=CHM13_chrY_T0000614;Name=ENSG00000299768
CHM13_chrY	CAT	exon	8924415	8925330	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000614;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000614;transcript_name=CHM13_chrY_T0000614;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000614:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8925331	8928345	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000614;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000614;transcript_name=CHM13_chrY_T0000614;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000614:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928346	8928449	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000614;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000614;transcript_name=CHM13_chrY_T0000614;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000614:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8928450	8928923	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000614;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000614;transcript_name=CHM13_chrY_T0000614;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000614:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928924	8929036	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000614;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000614;transcript_name=CHM13_chrY_T0000614;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000614:2;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8929037	8930891	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000614;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000614;transcript_name=CHM13_chrY_T0000614;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000614:2;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8930892	8931029	.	-	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000614;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000614;transcript_name=CHM13_chrY_T0000614;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000614:3;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8927834	8931003	1000	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000615;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_G0000172;transcript_name=CHM13_chrY_T0000615;gene_name=ENSG00000299768;ID=CHM13_chrY_T0000615;Name=ENSG00000299768
CHM13_chrY	CAT	exon	8927834	8928449	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000615;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000615;transcript_name=CHM13_chrY_T0000615;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000615:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8928450	8928923	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000615;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000615;transcript_name=CHM13_chrY_T0000615;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000615:0;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928924	8929036	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000615;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000615;transcript_name=CHM13_chrY_T0000615;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000615:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8929037	8930891	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000615;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000615;transcript_name=CHM13_chrY_T0000615;gene_name=ENSG00000299768;ID=intron:CHM13_chrY_T0000615:1;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8930892	8931003	.	-	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=CHM13_chrY_T0000615;gene_id=CHM13_chrY_G0000172;Parent=CHM13_chrY_T0000615;transcript_name=CHM13_chrY_T0000615;gene_name=ENSG00000299768;ID=exon:CHM13_chrY_T0000615:2;Name=ENSG00000299768;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8917291	8929032	.	-	.	source_gene_common_name=RBMY1A3P;source_gene=ENSG00000197038.6;gene_id=CHM13_chrY_G0000173;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY1A3P;gene_sources=liftoff;ID=CHM13_chrY_G0000173;Name=RBMY1A3P
CHM13_chrY	CAT	transcript	8917291	8929032	1000	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_G0000173;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=CHM13_chrY_T0000612;Name=RBMY1A3P
CHM13_chrY	CAT	exon	8917291	8917592	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:CHM13_chrY_T0000612:0;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8917593	8918176	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:CHM13_chrY_T0000612:0;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8918177	8918287	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:CHM13_chrY_T0000612:1;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8918288	8918785	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:CHM13_chrY_T0000612:1;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8918786	8918896	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:CHM13_chrY_T0000612:2;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8918897	8919333	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:CHM13_chrY_T0000612:2;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8919334	8919443	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:CHM13_chrY_T0000612:3;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8919444	8919870	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:CHM13_chrY_T0000612:3;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8919871	8919981	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:CHM13_chrY_T0000612:4;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8919982	8920936	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:CHM13_chrY_T0000612:4;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8920937	8921051	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:CHM13_chrY_T0000612:5;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8921052	8923099	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:CHM13_chrY_T0000612:5;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8923100	8923252	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:CHM13_chrY_T0000612:6;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8923253	8925152	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:CHM13_chrY_T0000612:6;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8925153	8925330	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:CHM13_chrY_T0000612:7;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8925331	8928345	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:CHM13_chrY_T0000612:7;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928346	8928449	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:CHM13_chrY_T0000612:8;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8928450	8928923	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=intron:CHM13_chrY_T0000612:8;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8928924	8929032	.	-	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=CHM13_chrY_T0000612;gene_id=CHM13_chrY_G0000173;Parent=CHM13_chrY_T0000612;transcript_name=CHM13_chrY_T0000612;gene_name=RBMY1A3P;ID=exon:CHM13_chrY_T0000612:9;Name=RBMY1A3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8931962	8932210	.	+	.	source_gene_common_name=ENSG00000275310;source_gene=ENSG00000275310.1;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;gene_id=CHM13_chrY_G0000174;gene_biotype=processed_pseudogene;gene_name=ENSG00000275310;gene_sources=liftoff;ID=CHM13_chrY_G0000174;Name=ENSG00000275310
CHM13_chrY	CAT	transcript	8931962	8932210	1000	+	.	source_transcript=ENST00000610661.1;source_transcript_name=ENST00000610661;source_gene=ENSG00000275310.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275310.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610661.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275310;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;transcript_id=CHM13_chrY_T0000616;gene_id=CHM13_chrY_G0000174;Parent=CHM13_chrY_G0000174;transcript_name=CHM13_chrY_T0000616;gene_name=ENSG00000275310;ID=CHM13_chrY_T0000616;Name=ENSG00000275310
CHM13_chrY	CAT	exon	8931962	8932210	.	+	.	source_transcript=ENST00000610661.1;source_transcript_name=ENST00000610661;source_gene=ENSG00000275310.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275310.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610661.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275310;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;transcript_id=CHM13_chrY_T0000616;gene_id=CHM13_chrY_G0000174;Parent=CHM13_chrY_T0000616;transcript_name=CHM13_chrY_T0000616;gene_name=ENSG00000275310;ID=exon:CHM13_chrY_T0000616:0;Name=ENSG00000275310;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8936043	8940995	.	-	.	source_gene_common_name=TTTY20;source_gene=ENSG00000232808.1;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;gene_id=CHM13_chrY_G0000175;gene_biotype=lncRNA;gene_name=TTTY20;gene_sources=liftoff;ID=CHM13_chrY_G0000175;Name=TTTY20
CHM13_chrY	CAT	transcript	8936043	8940995	1000	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=CHM13_chrY_T0000617;gene_id=CHM13_chrY_G0000175;Parent=CHM13_chrY_G0000175;transcript_name=CHM13_chrY_T0000617;gene_name=TTTY20;ID=CHM13_chrY_T0000617;Name=TTTY20
CHM13_chrY	CAT	exon	8936043	8936219	.	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=CHM13_chrY_T0000617;gene_id=CHM13_chrY_G0000175;Parent=CHM13_chrY_T0000617;transcript_name=CHM13_chrY_T0000617;gene_name=TTTY20;ID=exon:CHM13_chrY_T0000617:0;Name=TTTY20;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8936220	8940913	.	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=CHM13_chrY_T0000617;gene_id=CHM13_chrY_G0000175;Parent=CHM13_chrY_T0000617;transcript_name=CHM13_chrY_T0000617;gene_name=TTTY20;ID=intron:CHM13_chrY_T0000617:0;Name=TTTY20;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8940914	8940995	.	-	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=CHM13_chrY_T0000617;gene_id=CHM13_chrY_G0000175;Parent=CHM13_chrY_T0000617;transcript_name=CHM13_chrY_T0000617;gene_name=TTTY20;ID=exon:CHM13_chrY_T0000617:1;Name=TTTY20;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8943627	8946423	.	+	.	source_gene_common_name=TSPY8;source_gene=ENSG00000229549.9;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;gene_id=CHM13_chrY_G0000176;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff;ID=CHM13_chrY_G0000176;Name=TSPY8
CHM13_chrY	CAT	transcript	8943627	8946423	100	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_G0000176;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=CHM13_chrY_T0000618;Name=TSPY8
CHM13_chrY	CAT	exon	8943627	8944158	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000618:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8943673	8944158	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000618:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	8943673	8943675	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=start_codon:CHM13_chrY_T0000618;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8944159	8944765	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000618:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8944766	8944843	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000618:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8944766	8944843	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000618:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8944844	8944971	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000618:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8944972	8945083	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000618:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8944972	8945083	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000618:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8945084	8945184	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000618:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8945185	8945330	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000618:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8945185	8945330	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000618:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8945331	8945436	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000618:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8945437	8945518	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000618:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8945437	8945518	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000618:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8945519	8946212	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000618:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8946213	8946423	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000618:5;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8946213	8946235	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000618:5;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	8946233	8946235	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=CHM13_chrY_T0000618;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000618;transcript_name=CHM13_chrY_T0000618;gene_name=TSPY8;ID=stop_codon:CHM13_chrY_T0000618;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8943627	8946422	100	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_G0000176;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=CHM13_chrY_T0000619;Name=TSPY8
CHM13_chrY	CAT	exon	8943627	8943759	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000619:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8943673	8943759	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000619:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	8943673	8943675	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=start_codon:CHM13_chrY_T0000619;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8943760	8944020	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000619:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8944021	8944158	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000619:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8944021	8944158	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000619:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8944159	8944765	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000619:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8944766	8944843	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000619:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8944766	8944843	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000619:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8944844	8944971	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000619:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8944972	8945083	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000619:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8944972	8945083	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000619:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8945084	8945184	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000619:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8945185	8945330	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000619:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8945185	8945330	.	+	2	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000619:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8945331	8945425	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000619:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8945426	8945518	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000619:5;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8945426	8945488	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000619:5;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	8945486	8945488	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=stop_codon:CHM13_chrY_T0000619;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8945519	8946212	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000619:5;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8946213	8946422	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000619;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000619;transcript_name=CHM13_chrY_T0000619;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000619:6;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8943673	8946422	100	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_G0000176;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=CHM13_chrY_T0000620;Name=TSPY8
CHM13_chrY	CAT	exon	8943673	8944158	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000620:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8943673	8944158	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000620:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	8943673	8943675	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=start_codon:CHM13_chrY_T0000620;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8944159	8944765	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000620:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8944766	8944843	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000620:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8944766	8944843	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000620:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8944844	8944971	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000620:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8944972	8945083	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000620:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8944972	8945083	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000620:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8945084	8945184	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000620:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8945185	8945330	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000620:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8945185	8945330	.	+	2	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000620:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8945331	8945425	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000620:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8945426	8945518	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000620:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8945426	8945488	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000620:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	8945486	8945488	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=stop_codon:CHM13_chrY_T0000620;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8945519	8946212	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000620:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8946213	8946422	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=CHM13_chrY_T0000620;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000620;transcript_name=CHM13_chrY_T0000620;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000620:5;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8943673	8946429	1000	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=CHM13_chrY_T0000621;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_G0000176;transcript_name=CHM13_chrY_T0000621;gene_name=TSPY8;ID=CHM13_chrY_T0000621;Name=TSPY8
CHM13_chrY	CAT	exon	8943673	8944158	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=CHM13_chrY_T0000621;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000621;transcript_name=CHM13_chrY_T0000621;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000621:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8944159	8944765	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=CHM13_chrY_T0000621;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000621;transcript_name=CHM13_chrY_T0000621;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000621:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8944766	8944843	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=CHM13_chrY_T0000621;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000621;transcript_name=CHM13_chrY_T0000621;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000621:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8944844	8944971	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=CHM13_chrY_T0000621;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000621;transcript_name=CHM13_chrY_T0000621;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000621:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8944972	8945518	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=CHM13_chrY_T0000621;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000621;transcript_name=CHM13_chrY_T0000621;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000621:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8945519	8945645	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=CHM13_chrY_T0000621;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000621;transcript_name=CHM13_chrY_T0000621;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000621:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8945646	8946429	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=CHM13_chrY_T0000621;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000621;transcript_name=CHM13_chrY_T0000621;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000621:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8945033	8946414	1000	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000622;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_G0000176;transcript_name=CHM13_chrY_T0000622;gene_name=TSPY8;ID=CHM13_chrY_T0000622;Name=TSPY8
CHM13_chrY	CAT	exon	8945033	8945330	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000622;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000622;transcript_name=CHM13_chrY_T0000622;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000622:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8945331	8945436	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000622;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000622;transcript_name=CHM13_chrY_T0000622;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000622:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8945437	8945518	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000622;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000622;transcript_name=CHM13_chrY_T0000622;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000622:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8945519	8946212	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000622;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000622;transcript_name=CHM13_chrY_T0000622;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000622:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8946213	8946414	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=CHM13_chrY_T0000622;gene_id=CHM13_chrY_G0000176;Parent=CHM13_chrY_T0000622;transcript_name=CHM13_chrY_T0000622;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000622:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8953624	8961328	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_2;gene_id=CHM13_chrY_G0000177;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000177;Name=FAM197Y9
CHM13_chrY	CAT	transcript	8953624	8961328	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000623;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_G0000177;transcript_name=CHM13_chrY_T0000623;gene_name=FAM197Y9;ID=CHM13_chrY_T0000623;Name=FAM197Y9
CHM13_chrY	CAT	exon	8953624	8955751	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000623;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_T0000623;transcript_name=CHM13_chrY_T0000623;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000623:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8955752	8959301	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000623;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_T0000623;transcript_name=CHM13_chrY_T0000623;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000623:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8959302	8959387	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000623;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_T0000623;transcript_name=CHM13_chrY_T0000623;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000623:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8959388	8961208	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000623;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_T0000623;transcript_name=CHM13_chrY_T0000623;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000623:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8961209	8961328	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000623;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_T0000623;transcript_name=CHM13_chrY_T0000623;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000623:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8955692	8961310	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000624;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_G0000177;transcript_name=CHM13_chrY_T0000624;gene_name=FAM197Y9;ID=CHM13_chrY_T0000624;Name=FAM197Y9
CHM13_chrY	CAT	exon	8955692	8955751	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000624;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_T0000624;transcript_name=CHM13_chrY_T0000624;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000624:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8955752	8959301	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000624;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_T0000624;transcript_name=CHM13_chrY_T0000624;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000624:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8959302	8959460	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000624;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_T0000624;transcript_name=CHM13_chrY_T0000624;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000624:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8959461	8960976	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000624;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_T0000624;transcript_name=CHM13_chrY_T0000624;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000624:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8960977	8961122	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000624;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_T0000624;transcript_name=CHM13_chrY_T0000624;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000624:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8961123	8961208	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000624;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_T0000624;transcript_name=CHM13_chrY_T0000624;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000624:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8961209	8961310	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000624;gene_id=CHM13_chrY_G0000177;Parent=CHM13_chrY_T0000624;transcript_name=CHM13_chrY_T0000624;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000624:3;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8960977	8962970	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_1;gene_id=CHM13_chrY_G0000178;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000178;Name=FAM197Y9
CHM13_chrY	CAT	transcript	8960977	8962970	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000625;gene_id=CHM13_chrY_G0000178;Parent=CHM13_chrY_G0000178;transcript_name=CHM13_chrY_T0000625;gene_name=FAM197Y9;ID=CHM13_chrY_T0000625;Name=FAM197Y9
CHM13_chrY	CAT	exon	8960977	8961122	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000625;gene_id=CHM13_chrY_G0000178;Parent=CHM13_chrY_T0000625;transcript_name=CHM13_chrY_T0000625;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000625:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8961123	8961234	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000625;gene_id=CHM13_chrY_G0000178;Parent=CHM13_chrY_T0000625;transcript_name=CHM13_chrY_T0000625;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000625:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8961235	8961318	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000625;gene_id=CHM13_chrY_G0000178;Parent=CHM13_chrY_T0000625;transcript_name=CHM13_chrY_T0000625;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000625:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8961319	8962660	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000625;gene_id=CHM13_chrY_G0000178;Parent=CHM13_chrY_T0000625;transcript_name=CHM13_chrY_T0000625;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000625:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8962661	8962970	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000625;gene_id=CHM13_chrY_G0000178;Parent=CHM13_chrY_T0000625;transcript_name=CHM13_chrY_T0000625;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000625:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8963923	8966719	.	+	.	source_gene_common_name=TSPY8;source_gene=ENSG00000229549.9;alternative_source_transcripts=ENST00000287721.13;gene_id=CHM13_chrY_G0000179;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff;ID=CHM13_chrY_G0000179;Name=TSPY8
CHM13_chrY	CAT	transcript	8963923	8966719	100	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_G0000179;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=CHM13_chrY_T0000626;Name=TSPY8
CHM13_chrY	CAT	exon	8963923	8964454	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000626:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8963969	8964454	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000626:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	8963969	8963971	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=start_codon:CHM13_chrY_T0000626;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8964455	8965061	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000626:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965062	8965139	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000626:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8965062	8965139	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000626:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965140	8965267	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000626:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965268	8965379	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000626:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8965268	8965379	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000626:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965380	8965480	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000626:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965481	8965626	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000626:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8965481	8965626	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000626:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965627	8965732	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000626:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965733	8965814	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000626:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8965733	8965814	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000626:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965815	8966508	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000626:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8966509	8966719	.	+	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000626:5;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8966509	8966531	.	+	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000626:5;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	8966529	8966531	.	+	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000626;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000626;transcript_name=CHM13_chrY_T0000626;gene_name=TSPY8;ID=stop_codon:CHM13_chrY_T0000626;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8963923	8966718	100	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_G0000179;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=CHM13_chrY_T0000627;Name=TSPY8
CHM13_chrY	CAT	exon	8963923	8964055	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000627:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8963969	8964055	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000627:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	8963969	8963971	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=start_codon:CHM13_chrY_T0000627;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8964056	8964316	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000627:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8964317	8964454	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000627:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8964317	8964454	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000627:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8964455	8965061	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000627:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965062	8965139	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000627:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8965062	8965139	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000627:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965140	8965267	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000627:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965268	8965379	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000627:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8965268	8965379	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000627:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965380	8965480	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000627:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965481	8965626	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000627:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8965481	8965626	.	+	2	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000627:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965627	8965721	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000627:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965722	8965814	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000627:5;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8965722	8965784	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000627:5;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	8965782	8965784	.	+	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=stop_codon:CHM13_chrY_T0000627;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965815	8966508	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000627:5;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8966509	8966718	.	+	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=CHM13_chrY_T0000627;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000627;transcript_name=CHM13_chrY_T0000627;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000627:6;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8963969	8966718	100	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_G0000179;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=CHM13_chrY_T0000628;Name=TSPY8
CHM13_chrY	CAT	exon	8963969	8964454	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000628:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8963969	8964454	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000628:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	8963969	8963971	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=start_codon:CHM13_chrY_T0000628;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8964455	8965061	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000628:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965062	8965139	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000628:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8965062	8965139	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000628:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965140	8965267	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000628:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965268	8965379	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000628:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8965268	8965379	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000628:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965380	8965480	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000628:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965481	8965626	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000628:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8965481	8965626	.	+	2	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000628:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965627	8965721	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000628:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965722	8965814	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000628:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	8965722	8965784	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=CDS:CHM13_chrY_T0000628:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	8965782	8965784	.	+	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=stop_codon:CHM13_chrY_T0000628;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965815	8966508	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000628:4;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8966509	8966718	.	+	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000628;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000628;transcript_name=CHM13_chrY_T0000628;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000628:5;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8963969	8966725	1000	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000629;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_G0000179;transcript_name=CHM13_chrY_T0000629;gene_name=TSPY8;ID=CHM13_chrY_T0000629;Name=TSPY8
CHM13_chrY	CAT	exon	8963969	8964454	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000629;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000629;transcript_name=CHM13_chrY_T0000629;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000629:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8964455	8965061	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000629;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000629;transcript_name=CHM13_chrY_T0000629;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000629:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965062	8965139	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000629;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000629;transcript_name=CHM13_chrY_T0000629;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000629:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965140	8965267	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000629;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000629;transcript_name=CHM13_chrY_T0000629;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000629:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965268	8965814	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000629;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000629;transcript_name=CHM13_chrY_T0000629;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000629:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965815	8965941	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000629;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000629;transcript_name=CHM13_chrY_T0000629;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000629:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965942	8966725	.	+	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000629;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000629;transcript_name=CHM13_chrY_T0000629;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000629:3;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8965329	8966710	1000	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=CHM13_chrY_T0000630;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_G0000179;transcript_name=CHM13_chrY_T0000630;gene_name=TSPY8;ID=CHM13_chrY_T0000630;Name=TSPY8
CHM13_chrY	CAT	exon	8965329	8965626	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=CHM13_chrY_T0000630;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000630;transcript_name=CHM13_chrY_T0000630;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000630:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965627	8965732	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=CHM13_chrY_T0000630;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000630;transcript_name=CHM13_chrY_T0000630;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000630:0;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8965733	8965814	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=CHM13_chrY_T0000630;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000630;transcript_name=CHM13_chrY_T0000630;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000630:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8965815	8966508	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=CHM13_chrY_T0000630;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000630;transcript_name=CHM13_chrY_T0000630;gene_name=TSPY8;ID=intron:CHM13_chrY_T0000630:1;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8966509	8966710	.	+	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=CHM13_chrY_T0000630;gene_id=CHM13_chrY_G0000179;Parent=CHM13_chrY_T0000630;transcript_name=CHM13_chrY_T0000630;gene_name=TSPY8;ID=exon:CHM13_chrY_T0000630:2;Name=TSPY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8973969	8981867	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000293362.1_2;gene_id=CHM13_chrY_G0000180;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=CHM13_chrY_G0000180;Name=FAM197Y8
CHM13_chrY	CAT	transcript	8973969	8981867	1000	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000631;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_G0000180;transcript_name=CHM13_chrY_T0000631;gene_name=FAM197Y8;ID=CHM13_chrY_T0000631;Name=FAM197Y8
CHM13_chrY	CAT	exon	8973969	8976096	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000631;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000631;transcript_name=CHM13_chrY_T0000631;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000631:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8976097	8979647	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000631;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000631;transcript_name=CHM13_chrY_T0000631;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000631:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8979648	8979733	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000631;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000631;transcript_name=CHM13_chrY_T0000631;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000631:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8979734	8981546	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000631;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000631;transcript_name=CHM13_chrY_T0000631;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000631:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8981547	8981656	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000631;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000631;transcript_name=CHM13_chrY_T0000631;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000631:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8981657	8981852	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000631;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000631;transcript_name=CHM13_chrY_T0000631;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000631:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8981853	8981867	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000631;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000631;transcript_name=CHM13_chrY_T0000631;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000631:3;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8976036	8981648	1000	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000632;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_G0000180;transcript_name=CHM13_chrY_T0000632;gene_name=FAM197Y8;ID=CHM13_chrY_T0000632;Name=FAM197Y8
CHM13_chrY	CAT	exon	8976036	8976096	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000632;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000632;transcript_name=CHM13_chrY_T0000632;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000632:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8976097	8979647	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000632;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000632;transcript_name=CHM13_chrY_T0000632;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000632:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8979648	8979806	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000632;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000632;transcript_name=CHM13_chrY_T0000632;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000632:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8979807	8981314	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000632;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000632;transcript_name=CHM13_chrY_T0000632;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000632:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8981315	8981460	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000632;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000632;transcript_name=CHM13_chrY_T0000632;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000632:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8981461	8981546	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000632;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000632;transcript_name=CHM13_chrY_T0000632;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000632:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8981547	8981648	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000632;gene_id=CHM13_chrY_G0000180;Parent=CHM13_chrY_T0000632;transcript_name=CHM13_chrY_T0000632;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000632:3;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8981312	8983279	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000225560.7;gene_id=CHM13_chrY_G0000181;gene_biotype=transcribed_processed_pseudogene;gene_name=FAM197Y8;gene_sources=liftoff;ID=CHM13_chrY_G0000181;Name=FAM197Y8
CHM13_chrY	CAT	transcript	8981312	8983279	1000	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000633;gene_id=CHM13_chrY_G0000181;Parent=CHM13_chrY_G0000181;transcript_name=CHM13_chrY_T0000633;gene_name=FAM197Y8;ID=CHM13_chrY_T0000633;Name=FAM197Y8
CHM13_chrY	CAT	exon	8981312	8981460	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000633;gene_id=CHM13_chrY_G0000181;Parent=CHM13_chrY_T0000633;transcript_name=CHM13_chrY_T0000633;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000633:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8981461	8981546	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000633;gene_id=CHM13_chrY_G0000181;Parent=CHM13_chrY_T0000633;transcript_name=CHM13_chrY_T0000633;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000633:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8981547	8981656	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000633;gene_id=CHM13_chrY_G0000181;Parent=CHM13_chrY_T0000633;transcript_name=CHM13_chrY_T0000633;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000633:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8981657	8982978	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000633;gene_id=CHM13_chrY_G0000181;Parent=CHM13_chrY_T0000633;transcript_name=CHM13_chrY_T0000633;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000633:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8982979	8983279	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000633;gene_id=CHM13_chrY_G0000181;Parent=CHM13_chrY_T0000633;transcript_name=CHM13_chrY_T0000633;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000633:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8984302	8987070	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_4;gene_id=CHM13_chrY_G0000182;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000182;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	8984302	8987070	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_G0000182;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000634;Name=ENSG00000293749
CHM13_chrY	CAT	exon	8984302	8984394	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000634;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000634:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8984395	8984655	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000634;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000634:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8984656	8984793	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000634;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000634:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8984794	8985400	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000634;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000634:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985401	8985478	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000634;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000634:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985479	8985606	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000634;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000634:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985607	8985718	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000634;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000634:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985719	8985819	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000634;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000634:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985820	8985965	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000634;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000634:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985966	8986071	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000634;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000634:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986072	8986153	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000634;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000634:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8986154	8986847	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000634;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000634:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986848	8987070	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000634;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000634;transcript_name=CHM13_chrY_T0000634;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000634:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8984314	8987058	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_G0000182;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000636;Name=ENSG00000293749
CHM13_chrY	CAT	exon	8984314	8984394	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000636;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000636:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8984395	8984655	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000636;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000636:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8984656	8984793	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000636;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000636:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8984794	8985400	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000636;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000636:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985401	8985478	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000636;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000636:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985479	8985606	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000636;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000636:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985607	8985718	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000636;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000636:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985719	8985826	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000636;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000636:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985827	8985965	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000636;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000636:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985966	8986071	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000636;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000636:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986072	8986153	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000636;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000636:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8986154	8986847	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000636;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000636:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986848	8987058	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000636;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000636;transcript_name=CHM13_chrY_T0000636;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000636:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8984323	8987065	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_G0000182;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000637;Name=ENSG00000293749
CHM13_chrY	CAT	exon	8984323	8984394	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000637;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000637:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8984395	8984655	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000637;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000637:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8984656	8984793	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000637;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000637:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8984794	8985400	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000637;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000637:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985401	8985478	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000637;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000637:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985479	8985606	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000637;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000637:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985607	8985718	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000637;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000637:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985719	8985819	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000637;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000637:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985820	8985965	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000637;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000637:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985966	8986060	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000637;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000637:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986061	8986153	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000637;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000637:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8986154	8986847	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000637;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000637:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986848	8987065	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000637;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000637;transcript_name=CHM13_chrY_T0000637;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000637:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8984525	8987063	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000638;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_G0000182;transcript_name=CHM13_chrY_T0000638;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000638;Name=ENSG00000293749
CHM13_chrY	CAT	exon	8984525	8984793	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000638;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000638;transcript_name=CHM13_chrY_T0000638;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000638:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8984794	8985400	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000638;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000638;transcript_name=CHM13_chrY_T0000638;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000638:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985401	8985478	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000638;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000638;transcript_name=CHM13_chrY_T0000638;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000638:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985479	8985606	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000638;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000638;transcript_name=CHM13_chrY_T0000638;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000638:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985607	8985718	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000638;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000638;transcript_name=CHM13_chrY_T0000638;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000638:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985719	8985819	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000638;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000638;transcript_name=CHM13_chrY_T0000638;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000638:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985820	8985965	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000638;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000638;transcript_name=CHM13_chrY_T0000638;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000638:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985966	8986071	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000638;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000638;transcript_name=CHM13_chrY_T0000638;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000638:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986072	8986153	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000638;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000638;transcript_name=CHM13_chrY_T0000638;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000638:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8986154	8986847	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000638;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000638;transcript_name=CHM13_chrY_T0000638;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000638:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986848	8987063	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000638;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000638;transcript_name=CHM13_chrY_T0000638;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000638:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8984621	8987058	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000639;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_G0000182;transcript_name=CHM13_chrY_T0000639;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000639;Name=ENSG00000293749
CHM13_chrY	CAT	exon	8984621	8984793	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000639;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000639;transcript_name=CHM13_chrY_T0000639;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000639:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8984794	8985400	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000639;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000639;transcript_name=CHM13_chrY_T0000639;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000639:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985401	8985478	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000639;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000639;transcript_name=CHM13_chrY_T0000639;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000639:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985479	8985606	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000639;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000639;transcript_name=CHM13_chrY_T0000639;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000639:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985607	8985718	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000639;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000639;transcript_name=CHM13_chrY_T0000639;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000639:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985719	8985826	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000639;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000639;transcript_name=CHM13_chrY_T0000639;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000639:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985827	8985965	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000639;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000639;transcript_name=CHM13_chrY_T0000639;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000639:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985966	8986071	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000639;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000639;transcript_name=CHM13_chrY_T0000639;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000639:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986072	8986153	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000639;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000639;transcript_name=CHM13_chrY_T0000639;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000639:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8986154	8986847	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000639;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000639;transcript_name=CHM13_chrY_T0000639;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000639:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986848	8987058	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000639;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000639;transcript_name=CHM13_chrY_T0000639;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000639:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8984747	8987069	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000640;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_G0000182;transcript_name=CHM13_chrY_T0000640;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000640;Name=ENSG00000293749
CHM13_chrY	CAT	exon	8984747	8984849	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000640;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000640;transcript_name=CHM13_chrY_T0000640;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000640:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8984850	8985418	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000640;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000640;transcript_name=CHM13_chrY_T0000640;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000640:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985419	8985478	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000640;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000640;transcript_name=CHM13_chrY_T0000640;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000640:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985479	8985606	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000640;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000640;transcript_name=CHM13_chrY_T0000640;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000640:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985607	8985718	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000640;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000640;transcript_name=CHM13_chrY_T0000640;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000640:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985719	8985819	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000640;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000640;transcript_name=CHM13_chrY_T0000640;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000640:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985820	8985965	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000640;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000640;transcript_name=CHM13_chrY_T0000640;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000640:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985966	8986071	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000640;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000640;transcript_name=CHM13_chrY_T0000640;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000640:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986072	8986153	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000640;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000640;transcript_name=CHM13_chrY_T0000640;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000640:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8986154	8986847	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000640;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000640;transcript_name=CHM13_chrY_T0000640;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000640:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986848	8987069	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000640;gene_id=CHM13_chrY_G0000182;Parent=CHM13_chrY_T0000640;transcript_name=CHM13_chrY_T0000640;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000640:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8984308	8986870	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_4;gene_id=CHM13_chrY_G0000183;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=CHM13_chrY_G0000183;Name=TSPY6P
CHM13_chrY	CAT	transcript	8984308	8986870	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_G0000183;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=CHM13_chrY_T0000635;Name=TSPY6P
CHM13_chrY	CAT	exon	8984308	8984518	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_T0000635;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000635:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8984519	8984526	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_T0000635;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000635:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8984527	8984793	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_T0000635;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000635:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8984794	8985400	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_T0000635;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000635:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985401	8985478	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_T0000635;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000635:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985479	8985606	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_T0000635;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000635:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985607	8985718	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_T0000635;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000635:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985719	8985819	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_T0000635;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000635:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985820	8985965	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_T0000635;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000635:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985966	8986071	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_T0000635;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000635:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986072	8986153	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_T0000635;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000635:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8986154	8986847	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_T0000635;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000635:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986848	8986870	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000635;gene_id=CHM13_chrY_G0000183;Parent=CHM13_chrY_T0000635;transcript_name=CHM13_chrY_T0000635;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000635:6;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8985448	8987065	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=CHM13_chrY_G0000184;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000184;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	8985448	8987056	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000641;gene_id=CHM13_chrY_G0000184;Parent=CHM13_chrY_G0000184;transcript_name=CHM13_chrY_T0000641;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000641;Name=ENSG00000293749
CHM13_chrY	CAT	exon	8985448	8985478	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000641;gene_id=CHM13_chrY_G0000184;Parent=CHM13_chrY_T0000641;transcript_name=CHM13_chrY_T0000641;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000641:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985479	8985606	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000641;gene_id=CHM13_chrY_G0000184;Parent=CHM13_chrY_T0000641;transcript_name=CHM13_chrY_T0000641;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000641:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8985607	8985965	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000641;gene_id=CHM13_chrY_G0000184;Parent=CHM13_chrY_T0000641;transcript_name=CHM13_chrY_T0000641;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000641:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8985966	8986071	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000641;gene_id=CHM13_chrY_G0000184;Parent=CHM13_chrY_T0000641;transcript_name=CHM13_chrY_T0000641;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000641:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986072	8986153	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000641;gene_id=CHM13_chrY_G0000184;Parent=CHM13_chrY_T0000641;transcript_name=CHM13_chrY_T0000641;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000641:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8986154	8986847	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000641;gene_id=CHM13_chrY_G0000184;Parent=CHM13_chrY_T0000641;transcript_name=CHM13_chrY_T0000641;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000641:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986848	8987056	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000641;gene_id=CHM13_chrY_G0000184;Parent=CHM13_chrY_T0000641;transcript_name=CHM13_chrY_T0000641;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000641:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8985993	8987065	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000642;gene_id=CHM13_chrY_G0000184;Parent=CHM13_chrY_G0000184;transcript_name=CHM13_chrY_T0000642;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000642;Name=ENSG00000293749
CHM13_chrY	CAT	exon	8985993	8986153	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000642;gene_id=CHM13_chrY_G0000184;Parent=CHM13_chrY_T0000642;transcript_name=CHM13_chrY_T0000642;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000642:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8986154	8986847	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000642;gene_id=CHM13_chrY_G0000184;Parent=CHM13_chrY_T0000642;transcript_name=CHM13_chrY_T0000642;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000642:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8986848	8987065	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000642;gene_id=CHM13_chrY_G0000184;Parent=CHM13_chrY_T0000642;transcript_name=CHM13_chrY_T0000642;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000642:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	8994257	9002134	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000293362.1;gene_id=CHM13_chrY_G0000185;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=CHM13_chrY_G0000185;Name=FAM197Y8
CHM13_chrY	CAT	transcript	8994257	9002134	1000	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000643;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_G0000185;transcript_name=CHM13_chrY_T0000643;gene_name=FAM197Y8;ID=CHM13_chrY_T0000643;Name=FAM197Y8
CHM13_chrY	CAT	exon	8994257	8996385	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000643;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000643;transcript_name=CHM13_chrY_T0000643;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000643:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8996386	8999935	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000643;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000643;transcript_name=CHM13_chrY_T0000643;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000643:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8999936	9000021	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000643;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000643;transcript_name=CHM13_chrY_T0000643;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000643:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9000022	9001813	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000643;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000643;transcript_name=CHM13_chrY_T0000643;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000643:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9001814	9001923	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000643;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000643;transcript_name=CHM13_chrY_T0000643;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000643:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9001924	9002119	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000643;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000643;transcript_name=CHM13_chrY_T0000643;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000643:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9002120	9002134	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000643;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000643;transcript_name=CHM13_chrY_T0000643;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000643:3;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	8996325	9001915	1000	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000644;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_G0000185;transcript_name=CHM13_chrY_T0000644;gene_name=FAM197Y8;ID=CHM13_chrY_T0000644;Name=FAM197Y8
CHM13_chrY	CAT	exon	8996325	8996385	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000644;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000644;transcript_name=CHM13_chrY_T0000644;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000644:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	8996386	8999935	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000644;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000644;transcript_name=CHM13_chrY_T0000644;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000644:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	8999936	9000094	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000644;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000644;transcript_name=CHM13_chrY_T0000644;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000644:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9000095	9001581	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000644;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000644;transcript_name=CHM13_chrY_T0000644;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000644:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9001582	9001727	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000644;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000644;transcript_name=CHM13_chrY_T0000644;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000644:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9001728	9001813	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000644;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000644;transcript_name=CHM13_chrY_T0000644;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000644:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9001814	9001915	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000644;gene_id=CHM13_chrY_G0000185;Parent=CHM13_chrY_T0000644;transcript_name=CHM13_chrY_T0000644;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000644:3;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9001579	9003545	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000225560.7_2;gene_id=CHM13_chrY_G0000186;gene_biotype=transcribed_processed_pseudogene;gene_name=FAM197Y8;gene_sources=liftoff;ID=CHM13_chrY_G0000186;Name=FAM197Y8
CHM13_chrY	CAT	transcript	9001579	9003545	1000	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_2;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_2;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000645;gene_id=CHM13_chrY_G0000186;Parent=CHM13_chrY_G0000186;transcript_name=CHM13_chrY_T0000645;gene_name=FAM197Y8;ID=CHM13_chrY_T0000645;Name=FAM197Y8
CHM13_chrY	CAT	exon	9001579	9001727	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_2;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_2;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000645;gene_id=CHM13_chrY_G0000186;Parent=CHM13_chrY_T0000645;transcript_name=CHM13_chrY_T0000645;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000645:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9001728	9001813	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_2;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_2;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000645;gene_id=CHM13_chrY_G0000186;Parent=CHM13_chrY_T0000645;transcript_name=CHM13_chrY_T0000645;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000645:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9001814	9001923	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_2;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_2;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000645;gene_id=CHM13_chrY_G0000186;Parent=CHM13_chrY_T0000645;transcript_name=CHM13_chrY_T0000645;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000645:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9001924	9003244	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_2;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_2;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000645;gene_id=CHM13_chrY_G0000186;Parent=CHM13_chrY_T0000645;transcript_name=CHM13_chrY_T0000645;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000645:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9003245	9003545	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_2;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_2;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000645;gene_id=CHM13_chrY_G0000186;Parent=CHM13_chrY_T0000645;transcript_name=CHM13_chrY_T0000645;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000645:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9004532	9007337	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1_1;gene_id=CHM13_chrY_G0000187;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=CHM13_chrY_G0000187;Name=ENSG00000301844
CHM13_chrY	CAT	transcript	9004532	9007337	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000646;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_G0000187;transcript_name=CHM13_chrY_T0000646;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000646;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9004532	9005060	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000646;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000646;transcript_name=CHM13_chrY_T0000646;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000646:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005061	9005667	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000646;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000646;transcript_name=CHM13_chrY_T0000646;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000646:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005668	9005745	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000646;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000646;transcript_name=CHM13_chrY_T0000646;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000646:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005746	9005873	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000646;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000646;transcript_name=CHM13_chrY_T0000646;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000646:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005874	9005985	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000646;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000646;transcript_name=CHM13_chrY_T0000646;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000646:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005986	9006086	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000646;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000646;transcript_name=CHM13_chrY_T0000646;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000646:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9006087	9006232	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000646;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000646;transcript_name=CHM13_chrY_T0000646;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000646:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006233	9006338	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000646;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000646;transcript_name=CHM13_chrY_T0000646;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000646:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9006339	9006420	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000646;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000646;transcript_name=CHM13_chrY_T0000646;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000646:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006421	9007114	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000646;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000646;transcript_name=CHM13_chrY_T0000646;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000646:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9007115	9007337	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000646;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000646;transcript_name=CHM13_chrY_T0000646;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000646:5;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9004541	9007332	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000647;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_G0000187;transcript_name=CHM13_chrY_T0000647;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000647;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9004541	9005060	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000647;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000647;transcript_name=CHM13_chrY_T0000647;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000647:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005061	9005667	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000647;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000647;transcript_name=CHM13_chrY_T0000647;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000647:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005668	9005745	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000647;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000647;transcript_name=CHM13_chrY_T0000647;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000647:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005746	9005873	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000647;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000647;transcript_name=CHM13_chrY_T0000647;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000647:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005874	9005985	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000647;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000647;transcript_name=CHM13_chrY_T0000647;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000647:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005986	9006093	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000647;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000647;transcript_name=CHM13_chrY_T0000647;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000647:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9006094	9006232	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000647;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000647;transcript_name=CHM13_chrY_T0000647;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000647:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006233	9006338	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000647;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000647;transcript_name=CHM13_chrY_T0000647;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000647:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9006339	9006420	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000647;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000647;transcript_name=CHM13_chrY_T0000647;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000647:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006421	9007114	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000647;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000647;transcript_name=CHM13_chrY_T0000647;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000647:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9007115	9007332	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000647;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000647;transcript_name=CHM13_chrY_T0000647;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000647:5;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9004563	9007327	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000648;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_G0000187;transcript_name=CHM13_chrY_T0000648;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000648;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9004563	9005060	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000648;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000648;transcript_name=CHM13_chrY_T0000648;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000648:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005061	9005667	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000648;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000648;transcript_name=CHM13_chrY_T0000648;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000648:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005668	9005745	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000648;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000648;transcript_name=CHM13_chrY_T0000648;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000648:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005746	9005873	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000648;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000648;transcript_name=CHM13_chrY_T0000648;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000648:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005874	9005985	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000648;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000648;transcript_name=CHM13_chrY_T0000648;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000648:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005986	9006086	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000648;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000648;transcript_name=CHM13_chrY_T0000648;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000648:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9006087	9006420	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000648;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000648;transcript_name=CHM13_chrY_T0000648;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000648:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006421	9007114	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000648;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000648;transcript_name=CHM13_chrY_T0000648;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000648:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9007115	9007327	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000648;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000648;transcript_name=CHM13_chrY_T0000648;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000648:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9004573	9007332	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000649;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_G0000187;transcript_name=CHM13_chrY_T0000649;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000649;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9004573	9005060	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000649;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000649;transcript_name=CHM13_chrY_T0000649;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000649:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005061	9005667	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000649;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000649;transcript_name=CHM13_chrY_T0000649;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000649:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005668	9005745	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000649;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000649;transcript_name=CHM13_chrY_T0000649;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000649:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005746	9005873	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000649;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000649;transcript_name=CHM13_chrY_T0000649;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000649:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005874	9006232	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000649;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000649;transcript_name=CHM13_chrY_T0000649;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000649:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006233	9006338	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000649;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000649;transcript_name=CHM13_chrY_T0000649;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000649:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9006339	9006420	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000649;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000649;transcript_name=CHM13_chrY_T0000649;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000649:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006421	9007114	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000649;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000649;transcript_name=CHM13_chrY_T0000649;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000649:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9007115	9007332	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000649;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000649;transcript_name=CHM13_chrY_T0000649;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000649:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9004575	9007332	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000650;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_G0000187;transcript_name=CHM13_chrY_T0000650;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000650;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9004575	9005060	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000650;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000650;transcript_name=CHM13_chrY_T0000650;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000650:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005061	9005667	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000650;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000650;transcript_name=CHM13_chrY_T0000650;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000650:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005668	9005745	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000650;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000650;transcript_name=CHM13_chrY_T0000650;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000650:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005746	9005873	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000650;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000650;transcript_name=CHM13_chrY_T0000650;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000650:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005874	9005985	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000650;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000650;transcript_name=CHM13_chrY_T0000650;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000650:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005986	9006086	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000650;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000650;transcript_name=CHM13_chrY_T0000650;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000650:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9006087	9006232	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000650;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000650;transcript_name=CHM13_chrY_T0000650;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000650:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006233	9006327	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000650;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000650;transcript_name=CHM13_chrY_T0000650;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000650:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9006328	9006420	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000650;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000650;transcript_name=CHM13_chrY_T0000650;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000650:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006421	9007114	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000650;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000650;transcript_name=CHM13_chrY_T0000650;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000650:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9007115	9007332	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000650;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000650;transcript_name=CHM13_chrY_T0000650;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000650:5;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9004575	9007325	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000651;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_G0000187;transcript_name=CHM13_chrY_T0000651;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000651;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9004575	9005060	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000651;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000651;transcript_name=CHM13_chrY_T0000651;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000651:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005061	9005667	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000651;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000651;transcript_name=CHM13_chrY_T0000651;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000651:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005668	9005745	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000651;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000651;transcript_name=CHM13_chrY_T0000651;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000651:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005746	9005873	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000651;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000651;transcript_name=CHM13_chrY_T0000651;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000651:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005874	9006420	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000651;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000651;transcript_name=CHM13_chrY_T0000651;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000651:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006421	9007114	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000651;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000651;transcript_name=CHM13_chrY_T0000651;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000651:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9007115	9007325	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000651;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000651;transcript_name=CHM13_chrY_T0000651;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000651:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9004595	9007332	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000653;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_G0000187;transcript_name=CHM13_chrY_T0000653;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000653;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9004595	9005060	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000653;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000653;transcript_name=CHM13_chrY_T0000653;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000653:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005061	9005667	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000653;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000653;transcript_name=CHM13_chrY_T0000653;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000653:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005668	9005745	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000653;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000653;transcript_name=CHM13_chrY_T0000653;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000653:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005746	9005873	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000653;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000653;transcript_name=CHM13_chrY_T0000653;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000653:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005874	9006232	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000653;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000653;transcript_name=CHM13_chrY_T0000653;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000653:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006233	9006327	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000653;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000653;transcript_name=CHM13_chrY_T0000653;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000653:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9006328	9006420	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000653;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000653;transcript_name=CHM13_chrY_T0000653;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000653:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006421	9007114	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000653;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000653;transcript_name=CHM13_chrY_T0000653;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000653:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9007115	9007332	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000653;gene_id=CHM13_chrY_G0000187;Parent=CHM13_chrY_T0000653;transcript_name=CHM13_chrY_T0000653;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000653:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9004575	9007325	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8_1;gene_id=CHM13_chrY_G0000188;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=CHM13_chrY_G0000188;Name=TSPY7P
CHM13_chrY	CAT	transcript	9004575	9007325	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000652;gene_id=CHM13_chrY_G0000188;Parent=CHM13_chrY_G0000188;transcript_name=CHM13_chrY_T0000652;gene_name=TSPY7P;ID=CHM13_chrY_T0000652;Name=TSPY7P
CHM13_chrY	CAT	exon	9004575	9005060	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000652;gene_id=CHM13_chrY_G0000188;Parent=CHM13_chrY_T0000652;transcript_name=CHM13_chrY_T0000652;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000652:0;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005061	9005667	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000652;gene_id=CHM13_chrY_G0000188;Parent=CHM13_chrY_T0000652;transcript_name=CHM13_chrY_T0000652;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000652:0;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005668	9005745	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000652;gene_id=CHM13_chrY_G0000188;Parent=CHM13_chrY_T0000652;transcript_name=CHM13_chrY_T0000652;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000652:1;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005746	9005873	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000652;gene_id=CHM13_chrY_G0000188;Parent=CHM13_chrY_T0000652;transcript_name=CHM13_chrY_T0000652;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000652:1;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9005874	9005985	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000652;gene_id=CHM13_chrY_G0000188;Parent=CHM13_chrY_T0000652;transcript_name=CHM13_chrY_T0000652;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000652:2;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9005986	9006086	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000652;gene_id=CHM13_chrY_G0000188;Parent=CHM13_chrY_T0000652;transcript_name=CHM13_chrY_T0000652;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000652:2;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9006087	9006232	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000652;gene_id=CHM13_chrY_G0000188;Parent=CHM13_chrY_T0000652;transcript_name=CHM13_chrY_T0000652;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000652:3;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006233	9006338	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000652;gene_id=CHM13_chrY_G0000188;Parent=CHM13_chrY_T0000652;transcript_name=CHM13_chrY_T0000652;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000652:3;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9006339	9006420	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000652;gene_id=CHM13_chrY_G0000188;Parent=CHM13_chrY_T0000652;transcript_name=CHM13_chrY_T0000652;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000652:4;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9006421	9007114	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000652;gene_id=CHM13_chrY_G0000188;Parent=CHM13_chrY_T0000652;transcript_name=CHM13_chrY_T0000652;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000652:4;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9007115	9007325	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000652;gene_id=CHM13_chrY_G0000188;Parent=CHM13_chrY_T0000652;transcript_name=CHM13_chrY_T0000652;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000652:5;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9014564	9022440	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7;gene_id=CHM13_chrY_G0000189;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=CHM13_chrY_G0000189;Name=FAM197Y7
CHM13_chrY	CAT	transcript	9014564	9022440	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000654;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_G0000189;transcript_name=CHM13_chrY_T0000654;gene_name=FAM197Y7;ID=CHM13_chrY_T0000654;Name=FAM197Y7
CHM13_chrY	CAT	exon	9014564	9016677	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000654;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000654;transcript_name=CHM13_chrY_T0000654;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000654:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9016678	9020226	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000654;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000654;transcript_name=CHM13_chrY_T0000654;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000654:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9020227	9020312	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000654;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000654;transcript_name=CHM13_chrY_T0000654;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000654:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9020313	9022119	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000654;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000654;transcript_name=CHM13_chrY_T0000654;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000654:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9022120	9022229	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000654;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000654;transcript_name=CHM13_chrY_T0000654;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000654:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9022230	9022425	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000654;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000654;transcript_name=CHM13_chrY_T0000654;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000654:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9022426	9022440	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000654;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000654;transcript_name=CHM13_chrY_T0000654;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000654:3;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9016618	9022221	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000655;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_G0000189;transcript_name=CHM13_chrY_T0000655;gene_name=FAM197Y7;ID=CHM13_chrY_T0000655;Name=FAM197Y7
CHM13_chrY	CAT	exon	9016618	9016677	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000655;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000655;transcript_name=CHM13_chrY_T0000655;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000655:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9016678	9020226	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000655;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000655;transcript_name=CHM13_chrY_T0000655;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000655:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9020227	9020385	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000655;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000655;transcript_name=CHM13_chrY_T0000655;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000655:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9020386	9021887	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000655;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000655;transcript_name=CHM13_chrY_T0000655;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000655:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9021888	9022033	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000655;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000655;transcript_name=CHM13_chrY_T0000655;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000655:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9022034	9022119	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000655;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000655;transcript_name=CHM13_chrY_T0000655;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000655:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9022120	9022221	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000655;gene_id=CHM13_chrY_G0000189;Parent=CHM13_chrY_T0000655;transcript_name=CHM13_chrY_T0000655;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000655:3;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9021888	9023880	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1_4;gene_id=CHM13_chrY_G0000190;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=CHM13_chrY_G0000190;Name=ENSG00000286120
CHM13_chrY	CAT	transcript	9021888	9023880	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000656;gene_id=CHM13_chrY_G0000190;Parent=CHM13_chrY_G0000190;transcript_name=CHM13_chrY_T0000656;gene_name=ENSG00000286120;ID=CHM13_chrY_T0000656;Name=ENSG00000286120
CHM13_chrY	CAT	exon	9021888	9022033	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000656;gene_id=CHM13_chrY_G0000190;Parent=CHM13_chrY_T0000656;transcript_name=CHM13_chrY_T0000656;gene_name=ENSG00000286120;ID=exon:CHM13_chrY_T0000656:0;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9022034	9023569	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000656;gene_id=CHM13_chrY_G0000190;Parent=CHM13_chrY_T0000656;transcript_name=CHM13_chrY_T0000656;gene_name=ENSG00000286120;ID=intron:CHM13_chrY_T0000656:0;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9023570	9023880	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000656;gene_id=CHM13_chrY_G0000190;Parent=CHM13_chrY_T0000656;transcript_name=CHM13_chrY_T0000656;gene_name=ENSG00000286120;ID=exon:CHM13_chrY_T0000656:1;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9024834	9027648	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;alternative_source_transcripts=ENST00000287721.13;gene_id=CHM13_chrY_G0000191;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=CHM13_chrY_G0000191;Name=TSPY4
CHM13_chrY	CAT	transcript	9024834	9027648	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_G0000191;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=CHM13_chrY_T0000657;Name=TSPY4
CHM13_chrY	CAT	exon	9024834	9025383	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000657:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9024880	9025383	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000657:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9024880	9024882	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000657;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9025384	9025990	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000657:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9025991	9026068	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000657:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9025991	9026068	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000657:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026069	9026196	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000657:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9026197	9026308	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000657:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9026197	9026308	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000657:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026309	9026409	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000657:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9026410	9026555	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000657:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9026410	9026555	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000657:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026556	9026661	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000657:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9026662	9026743	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000657:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9026662	9026743	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000657:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026744	9027437	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000657:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9027438	9027648	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000657:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9027438	9027460	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000657:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9027458	9027460	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=CHM13_chrY_T0000657;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000657;transcript_name=CHM13_chrY_T0000657;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000657;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9024834	9027527	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_G0000191;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=CHM13_chrY_T0000658;Name=TSPY4
CHM13_chrY	CAT	exon	9024834	9024966	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000658:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9024880	9024966	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000658:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9024880	9024882	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000658;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9024967	9025245	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000658:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9025246	9025383	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000658:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9025246	9025383	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000658:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9025384	9025990	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000658:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9025991	9026068	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000658:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9025991	9026068	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000658:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026069	9026196	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000658:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9026197	9026308	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000658:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9026197	9026308	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000658:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026309	9026409	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000658:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9026410	9026555	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000658:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9026410	9026555	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000658:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026556	9026661	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000658:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9026662	9026743	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000658:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9026662	9026743	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000658:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026744	9027437	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000658:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9027438	9027527	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000658:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9027438	9027460	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000658:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9027458	9027460	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000658;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000658;transcript_name=CHM13_chrY_T0000658;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000658;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9024880	9027647	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_G0000191;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=CHM13_chrY_T0000659;Name=TSPY4
CHM13_chrY	CAT	exon	9024880	9025383	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000659:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9024880	9025383	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000659:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9024880	9024882	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000659;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9025384	9025990	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000659:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9025991	9026068	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000659:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9025991	9026068	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000659:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026069	9026196	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000659:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9026197	9026308	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000659:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9026197	9026308	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000659:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026309	9026409	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000659:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9026410	9026555	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000659:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9026410	9026555	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000659:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026556	9026650	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000659:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9026651	9026743	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000659:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9026651	9026713	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000659:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9026711	9026713	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000659;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026744	9027437	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000659:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9027438	9027647	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=CHM13_chrY_T0000659;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000659;transcript_name=CHM13_chrY_T0000659;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000659:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9024880	9027654	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000660;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_G0000191;transcript_name=CHM13_chrY_T0000660;gene_name=TSPY4;ID=CHM13_chrY_T0000660;Name=TSPY4
CHM13_chrY	CAT	exon	9024880	9025383	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000660;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000660;transcript_name=CHM13_chrY_T0000660;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000660:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9025384	9025990	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000660;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000660;transcript_name=CHM13_chrY_T0000660;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000660:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9025991	9026068	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000660;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000660;transcript_name=CHM13_chrY_T0000660;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000660:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026069	9026196	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000660;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000660;transcript_name=CHM13_chrY_T0000660;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000660:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9026197	9026743	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000660;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000660;transcript_name=CHM13_chrY_T0000660;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000660:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026744	9026870	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000660;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000660;transcript_name=CHM13_chrY_T0000660;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000660:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9026871	9027654	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=CHM13_chrY_T0000660;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000660;transcript_name=CHM13_chrY_T0000660;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000660:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9026258	9027639	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000661;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_G0000191;transcript_name=CHM13_chrY_T0000661;gene_name=TSPY4;ID=CHM13_chrY_T0000661;Name=TSPY4
CHM13_chrY	CAT	exon	9026258	9026555	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000661;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000661;transcript_name=CHM13_chrY_T0000661;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000661:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026556	9026650	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000661;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000661;transcript_name=CHM13_chrY_T0000661;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000661:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9026651	9026743	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000661;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000661;transcript_name=CHM13_chrY_T0000661;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000661:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9026744	9027437	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000661;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000661;transcript_name=CHM13_chrY_T0000661;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000661:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9027438	9027639	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000661;gene_id=CHM13_chrY_G0000191;Parent=CHM13_chrY_T0000661;transcript_name=CHM13_chrY_T0000661;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000661:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9036823	9042565	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000192;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000192;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9036823	9042565	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000662;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_G0000192;transcript_name=CHM13_chrY_T0000662;gene_name=FAM197Y5;ID=CHM13_chrY_T0000662;Name=FAM197Y5
CHM13_chrY	CAT	exon	9036823	9037012	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000662;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_T0000662;transcript_name=CHM13_chrY_T0000662;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000662:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9037013	9040562	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000662;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_T0000662;transcript_name=CHM13_chrY_T0000662;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000662:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9040563	9040648	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000662;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_T0000662;transcript_name=CHM13_chrY_T0000662;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000662:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9040649	9042451	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000662;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_T0000662;transcript_name=CHM13_chrY_T0000662;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000662:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9042452	9042565	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000662;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_T0000662;transcript_name=CHM13_chrY_T0000662;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000662:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9036953	9042553	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000663;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_G0000192;transcript_name=CHM13_chrY_T0000663;gene_name=FAM197Y5;ID=CHM13_chrY_T0000663;Name=FAM197Y5
CHM13_chrY	CAT	exon	9036953	9037012	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000663;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_T0000663;transcript_name=CHM13_chrY_T0000663;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000663:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9037013	9040562	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000663;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_T0000663;transcript_name=CHM13_chrY_T0000663;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000663:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9040563	9040721	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000663;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_T0000663;transcript_name=CHM13_chrY_T0000663;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000663:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9040722	9042219	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000663;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_T0000663;transcript_name=CHM13_chrY_T0000663;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000663:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9042220	9042365	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000663;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_T0000663;transcript_name=CHM13_chrY_T0000663;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000663:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9042366	9042451	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000663;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_T0000663;transcript_name=CHM13_chrY_T0000663;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000663:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9042452	9042553	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000663;gene_id=CHM13_chrY_G0000192;Parent=CHM13_chrY_T0000663;transcript_name=CHM13_chrY_T0000663;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000663:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9042220	9044212	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_13;gene_id=CHM13_chrY_G0000193;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000193;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9042220	9044212	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000664;gene_id=CHM13_chrY_G0000193;Parent=CHM13_chrY_G0000193;transcript_name=CHM13_chrY_T0000664;gene_name=FAM197Y5;ID=CHM13_chrY_T0000664;Name=FAM197Y5
CHM13_chrY	CAT	exon	9042220	9042365	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000664;gene_id=CHM13_chrY_G0000193;Parent=CHM13_chrY_T0000664;transcript_name=CHM13_chrY_T0000664;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000664:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9042366	9043901	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000664;gene_id=CHM13_chrY_G0000193;Parent=CHM13_chrY_T0000664;transcript_name=CHM13_chrY_T0000664;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000664:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9043902	9044212	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000664;gene_id=CHM13_chrY_G0000193;Parent=CHM13_chrY_T0000664;transcript_name=CHM13_chrY_T0000664;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000664:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9045166	9047980	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=CHM13_chrY_G0000194;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=CHM13_chrY_G0000194;Name=TSPY9
CHM13_chrY	CAT	transcript	9045166	9047980	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_G0000194;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=CHM13_chrY_T0000665;Name=TSPY9
CHM13_chrY	CAT	exon	9045166	9045715	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000665:0;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9045212	9045715	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000665:0;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9045212	9045214	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=start_codon:CHM13_chrY_T0000665;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9045716	9046322	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000665:0;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9046323	9046400	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000665:1;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9046323	9046400	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000665:1;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9046401	9046528	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000665:1;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9046529	9046640	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000665:2;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9046529	9046640	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000665:2;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9046641	9046741	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000665:2;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9046742	9046887	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000665:3;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9046742	9046887	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000665:3;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9046888	9046993	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000665:3;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9046994	9047075	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000665:4;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9046994	9047075	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000665:4;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9047076	9047769	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000665:4;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9047770	9047980	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000665:5;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9047770	9047792	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000665:5;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9047790	9047792	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000665;gene_id=CHM13_chrY_G0000194;Parent=CHM13_chrY_T0000665;transcript_name=CHM13_chrY_T0000665;gene_name=TSPY9;ID=stop_codon:CHM13_chrY_T0000665;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9055191	9063063	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7_1;gene_id=CHM13_chrY_G0000195;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=CHM13_chrY_G0000195;Name=FAM197Y7
CHM13_chrY	CAT	transcript	9055191	9063063	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000666;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_G0000195;transcript_name=CHM13_chrY_T0000666;gene_name=FAM197Y7;ID=CHM13_chrY_T0000666;Name=FAM197Y7
CHM13_chrY	CAT	exon	9055191	9057304	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000666;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000666;transcript_name=CHM13_chrY_T0000666;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000666:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9057305	9060853	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000666;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000666;transcript_name=CHM13_chrY_T0000666;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000666:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9060854	9060939	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000666;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000666;transcript_name=CHM13_chrY_T0000666;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000666:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9060940	9062742	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000666;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000666;transcript_name=CHM13_chrY_T0000666;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000666:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9062743	9062852	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000666;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000666;transcript_name=CHM13_chrY_T0000666;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000666:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9062853	9063048	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000666;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000666;transcript_name=CHM13_chrY_T0000666;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000666:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9063049	9063063	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000666;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000666;transcript_name=CHM13_chrY_T0000666;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000666:3;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9057245	9062844	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000667;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_G0000195;transcript_name=CHM13_chrY_T0000667;gene_name=FAM197Y7;ID=CHM13_chrY_T0000667;Name=FAM197Y7
CHM13_chrY	CAT	exon	9057245	9057304	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000667;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000667;transcript_name=CHM13_chrY_T0000667;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000667:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9057305	9060853	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000667;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000667;transcript_name=CHM13_chrY_T0000667;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000667:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9060854	9061012	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000667;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000667;transcript_name=CHM13_chrY_T0000667;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000667:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9061013	9062510	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000667;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000667;transcript_name=CHM13_chrY_T0000667;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000667:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9062511	9062656	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000667;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000667;transcript_name=CHM13_chrY_T0000667;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000667:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9062657	9062742	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000667;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000667;transcript_name=CHM13_chrY_T0000667;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000667:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9062743	9062844	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000667;gene_id=CHM13_chrY_G0000195;Parent=CHM13_chrY_T0000667;transcript_name=CHM13_chrY_T0000667;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000667:3;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9062511	9064503	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1;gene_id=CHM13_chrY_G0000196;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=CHM13_chrY_G0000196;Name=ENSG00000286120
CHM13_chrY	CAT	transcript	9062511	9064503	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000668;gene_id=CHM13_chrY_G0000196;Parent=CHM13_chrY_G0000196;transcript_name=CHM13_chrY_T0000668;gene_name=ENSG00000286120;ID=CHM13_chrY_T0000668;Name=ENSG00000286120
CHM13_chrY	CAT	exon	9062511	9062656	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000668;gene_id=CHM13_chrY_G0000196;Parent=CHM13_chrY_T0000668;transcript_name=CHM13_chrY_T0000668;gene_name=ENSG00000286120;ID=exon:CHM13_chrY_T0000668:0;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9062657	9064192	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000668;gene_id=CHM13_chrY_G0000196;Parent=CHM13_chrY_T0000668;transcript_name=CHM13_chrY_T0000668;gene_name=ENSG00000286120;ID=intron:CHM13_chrY_T0000668:0;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9064193	9064503	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000668;gene_id=CHM13_chrY_G0000196;Parent=CHM13_chrY_T0000668;transcript_name=CHM13_chrY_T0000668;gene_name=ENSG00000286120;ID=exon:CHM13_chrY_T0000668:1;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9065457	9068253	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;alternative_source_transcripts=ENST00000457222.6;gene_id=CHM13_chrY_G0000197;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=CHM13_chrY_G0000197;Name=TSPY3
CHM13_chrY	CAT	transcript	9065457	9068253	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_G0000197;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=CHM13_chrY_T0000669;Name=TSPY3
CHM13_chrY	CAT	exon	9065457	9065988	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000669:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9065503	9065988	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000669:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9065503	9065505	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000669;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9065989	9066595	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000669:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9066596	9066673	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000669:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9066596	9066673	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000669:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9066674	9066801	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000669:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9066802	9066913	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000669:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9066802	9066913	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000669:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9066914	9067014	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000669:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9067015	9067160	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000669:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9067015	9067160	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000669:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9067161	9067266	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000669:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9067267	9067348	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000669:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9067267	9067348	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000669:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9067349	9068042	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000669:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9068043	9068253	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000669:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9068043	9068065	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000669:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9068063	9068065	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000669;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000669;transcript_name=CHM13_chrY_T0000669;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000669;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9065503	9068252	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_G0000197;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=CHM13_chrY_T0000670;Name=TSPY3
CHM13_chrY	CAT	exon	9065503	9065988	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000670:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9065503	9065988	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000670:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9065503	9065505	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000670;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9065989	9066595	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000670:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9066596	9066673	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000670:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9066596	9066673	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000670:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9066674	9066801	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000670:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9066802	9066913	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000670:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9066802	9066913	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000670:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9066914	9067014	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000670:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9067015	9067160	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000670:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9067015	9067160	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000670:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9067161	9067255	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000670:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9067256	9067348	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000670:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9067256	9067318	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000670:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9067316	9067318	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000670;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9067349	9068042	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000670:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9068043	9068252	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000670;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000670;transcript_name=CHM13_chrY_T0000670;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000670:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9065503	9068065	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_G0000197;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=CHM13_chrY_T0000671;Name=TSPY3
CHM13_chrY	CAT	exon	9065503	9065589	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000671:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9065503	9065589	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000671:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9065503	9065505	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000671;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9065590	9065850	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000671:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9065851	9065988	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000671:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9065851	9065988	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000671:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9065989	9066595	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000671:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9066596	9066673	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000671:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9066596	9066673	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000671:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9066674	9066801	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000671:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9066802	9066913	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000671:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9066802	9066913	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000671:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9066914	9067014	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000671:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9067015	9067160	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000671:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9067015	9067160	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000671:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9067161	9067266	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000671:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9067267	9067348	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000671:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9067267	9067348	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000671:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9067349	9068042	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000671:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9068043	9068065	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000671:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9068043	9068065	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000671:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9068063	9068065	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000671;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000671;transcript_name=CHM13_chrY_T0000671;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000671;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9065503	9068259	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000672;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_G0000197;transcript_name=CHM13_chrY_T0000672;gene_name=TSPY3;ID=CHM13_chrY_T0000672;Name=TSPY3
CHM13_chrY	CAT	exon	9065503	9065988	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000672;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000672;transcript_name=CHM13_chrY_T0000672;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000672:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9065989	9066595	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000672;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000672;transcript_name=CHM13_chrY_T0000672;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000672:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9066596	9066673	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000672;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000672;transcript_name=CHM13_chrY_T0000672;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000672:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9066674	9066801	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000672;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000672;transcript_name=CHM13_chrY_T0000672;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000672:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9066802	9067348	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000672;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000672;transcript_name=CHM13_chrY_T0000672;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000672:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9067349	9067475	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000672;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000672;transcript_name=CHM13_chrY_T0000672;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000672:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9067476	9068259	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000672;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000672;transcript_name=CHM13_chrY_T0000672;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000672:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9066863	9068244	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=CHM13_chrY_T0000673;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_G0000197;transcript_name=CHM13_chrY_T0000673;gene_name=TSPY3;ID=CHM13_chrY_T0000673;Name=TSPY3
CHM13_chrY	CAT	exon	9066863	9067160	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=CHM13_chrY_T0000673;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000673;transcript_name=CHM13_chrY_T0000673;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000673:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9067161	9067255	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=CHM13_chrY_T0000673;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000673;transcript_name=CHM13_chrY_T0000673;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000673:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9067256	9067348	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=CHM13_chrY_T0000673;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000673;transcript_name=CHM13_chrY_T0000673;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000673:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9067349	9068042	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=CHM13_chrY_T0000673;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000673;transcript_name=CHM13_chrY_T0000673;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000673:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9068043	9068244	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=CHM13_chrY_T0000673;gene_id=CHM13_chrY_G0000197;Parent=CHM13_chrY_T0000673;transcript_name=CHM13_chrY_T0000673;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000673:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9077377	9083118	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000198;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000198;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9077377	9083118	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000674;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_G0000198;transcript_name=CHM13_chrY_T0000674;gene_name=FAM197Y5;ID=CHM13_chrY_T0000674;Name=FAM197Y5
CHM13_chrY	CAT	exon	9077377	9077566	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000674;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_T0000674;transcript_name=CHM13_chrY_T0000674;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000674:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9077567	9081115	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000674;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_T0000674;transcript_name=CHM13_chrY_T0000674;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000674:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9081116	9081201	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000674;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_T0000674;transcript_name=CHM13_chrY_T0000674;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000674:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9081202	9083004	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000674;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_T0000674;transcript_name=CHM13_chrY_T0000674;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000674:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9083005	9083118	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000674;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_T0000674;transcript_name=CHM13_chrY_T0000674;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000674:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9077507	9083106	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000675;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_G0000198;transcript_name=CHM13_chrY_T0000675;gene_name=FAM197Y5;ID=CHM13_chrY_T0000675;Name=FAM197Y5
CHM13_chrY	CAT	exon	9077507	9077566	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000675;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_T0000675;transcript_name=CHM13_chrY_T0000675;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000675:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9077567	9081115	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000675;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_T0000675;transcript_name=CHM13_chrY_T0000675;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000675:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9081116	9081274	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000675;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_T0000675;transcript_name=CHM13_chrY_T0000675;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000675:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9081275	9082772	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000675;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_T0000675;transcript_name=CHM13_chrY_T0000675;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000675:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9082773	9082918	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000675;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_T0000675;transcript_name=CHM13_chrY_T0000675;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000675:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9082919	9083004	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000675;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_T0000675;transcript_name=CHM13_chrY_T0000675;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000675:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9083005	9083106	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000675;gene_id=CHM13_chrY_G0000198;Parent=CHM13_chrY_T0000675;transcript_name=CHM13_chrY_T0000675;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000675:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9082773	9084765	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_1;gene_id=CHM13_chrY_G0000199;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000199;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9082773	9084765	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000676;gene_id=CHM13_chrY_G0000199;Parent=CHM13_chrY_G0000199;transcript_name=CHM13_chrY_T0000676;gene_name=FAM197Y5;ID=CHM13_chrY_T0000676;Name=FAM197Y5
CHM13_chrY	CAT	exon	9082773	9082918	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000676;gene_id=CHM13_chrY_G0000199;Parent=CHM13_chrY_T0000676;transcript_name=CHM13_chrY_T0000676;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000676:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9082919	9084454	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000676;gene_id=CHM13_chrY_G0000199;Parent=CHM13_chrY_T0000676;transcript_name=CHM13_chrY_T0000676;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000676:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9084455	9084765	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000676;gene_id=CHM13_chrY_G0000199;Parent=CHM13_chrY_T0000676;transcript_name=CHM13_chrY_T0000676;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000676:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9085719	9088515	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=CHM13_chrY_G0000200;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=CHM13_chrY_G0000200;Name=TSPY10
CHM13_chrY	CAT	transcript	9085719	9088515	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_G0000200;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=CHM13_chrY_T0000677;Name=TSPY10
CHM13_chrY	CAT	exon	9085719	9086250	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000677:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9085765	9086250	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000677:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9085765	9085767	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=start_codon:CHM13_chrY_T0000677;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9086251	9086857	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000677:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9086858	9086935	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000677:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9086858	9086935	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000677:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9086936	9087063	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000677:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9087064	9087175	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000677:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9087064	9087175	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000677:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9087176	9087276	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000677:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9087277	9087422	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000677:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9087277	9087422	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000677:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9087423	9087528	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000677:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9087529	9087610	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000677:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9087529	9087610	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000677:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9087611	9088304	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000677:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9088305	9088515	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000677:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9088305	9088327	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000677:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9088325	9088327	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000677;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000677;transcript_name=CHM13_chrY_T0000677;gene_name=TSPY10;ID=stop_codon:CHM13_chrY_T0000677;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9085765	9088514	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_G0000200;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=CHM13_chrY_T0000678;Name=TSPY10
CHM13_chrY	CAT	exon	9085765	9086250	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000678:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9085765	9086250	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000678:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9085765	9085767	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=start_codon:CHM13_chrY_T0000678;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9086251	9086857	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000678:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9086858	9086935	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000678:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9086858	9086935	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000678:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9086936	9087063	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000678:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9087064	9087175	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000678:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9087064	9087175	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000678:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9087176	9087276	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000678:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9087277	9087422	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000678:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9087277	9087422	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000678:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9087423	9087517	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000678:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9087518	9087610	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000678:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9087518	9087580	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000678:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9087578	9087580	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=stop_codon:CHM13_chrY_T0000678;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9087611	9088304	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000678:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9088305	9088514	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000678;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000678;transcript_name=CHM13_chrY_T0000678;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000678:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9085765	9088521	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000679;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_G0000200;transcript_name=CHM13_chrY_T0000679;gene_name=TSPY10;ID=CHM13_chrY_T0000679;Name=TSPY10
CHM13_chrY	CAT	exon	9085765	9086250	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000679;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000679;transcript_name=CHM13_chrY_T0000679;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000679:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9086251	9086857	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000679;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000679;transcript_name=CHM13_chrY_T0000679;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000679:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9086858	9086935	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000679;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000679;transcript_name=CHM13_chrY_T0000679;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000679:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9086936	9087063	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000679;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000679;transcript_name=CHM13_chrY_T0000679;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000679:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9087064	9087610	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000679;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000679;transcript_name=CHM13_chrY_T0000679;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000679:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9087611	9087737	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000679;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000679;transcript_name=CHM13_chrY_T0000679;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000679:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9087738	9088521	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000679;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000679;transcript_name=CHM13_chrY_T0000679;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000679:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9087125	9088506	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000680;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_G0000200;transcript_name=CHM13_chrY_T0000680;gene_name=TSPY10;ID=CHM13_chrY_T0000680;Name=TSPY10
CHM13_chrY	CAT	exon	9087125	9087422	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000680;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000680;transcript_name=CHM13_chrY_T0000680;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000680:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9087423	9087528	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000680;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000680;transcript_name=CHM13_chrY_T0000680;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000680:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9087529	9087610	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000680;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000680;transcript_name=CHM13_chrY_T0000680;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000680:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9087611	9088304	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000680;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000680;transcript_name=CHM13_chrY_T0000680;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000680:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9088305	9088506	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000680;gene_id=CHM13_chrY_G0000200;Parent=CHM13_chrY_T0000680;transcript_name=CHM13_chrY_T0000680;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000680:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9095720	9103605	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7_3;gene_id=CHM13_chrY_G0000201;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=CHM13_chrY_G0000201;Name=FAM197Y7
CHM13_chrY	CAT	transcript	9095720	9103605	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000681;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_G0000201;transcript_name=CHM13_chrY_T0000681;gene_name=FAM197Y7;ID=CHM13_chrY_T0000681;Name=FAM197Y7
CHM13_chrY	CAT	exon	9095720	9097844	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000681;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000681;transcript_name=CHM13_chrY_T0000681;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000681:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9097845	9101395	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000681;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000681;transcript_name=CHM13_chrY_T0000681;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000681:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9101396	9101481	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000681;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000681;transcript_name=CHM13_chrY_T0000681;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000681:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9101482	9103284	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000681;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000681;transcript_name=CHM13_chrY_T0000681;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000681:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9103285	9103394	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000681;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000681;transcript_name=CHM13_chrY_T0000681;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000681:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9103395	9103590	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000681;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000681;transcript_name=CHM13_chrY_T0000681;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000681:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9103591	9103605	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000681;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000681;transcript_name=CHM13_chrY_T0000681;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000681:3;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9097785	9103386	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000682;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_G0000201;transcript_name=CHM13_chrY_T0000682;gene_name=FAM197Y7;ID=CHM13_chrY_T0000682;Name=FAM197Y7
CHM13_chrY	CAT	exon	9097785	9097844	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000682;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000682;transcript_name=CHM13_chrY_T0000682;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000682:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9097845	9101395	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000682;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000682;transcript_name=CHM13_chrY_T0000682;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000682:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9101396	9101554	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000682;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000682;transcript_name=CHM13_chrY_T0000682;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000682:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9101555	9103052	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000682;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000682;transcript_name=CHM13_chrY_T0000682;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000682:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9103053	9103198	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000682;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000682;transcript_name=CHM13_chrY_T0000682;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000682:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9103199	9103284	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000682;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000682;transcript_name=CHM13_chrY_T0000682;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000682:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9103285	9103386	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000682;gene_id=CHM13_chrY_G0000201;Parent=CHM13_chrY_T0000682;transcript_name=CHM13_chrY_T0000682;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000682:3;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9103053	9105045	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1_1;gene_id=CHM13_chrY_G0000202;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=CHM13_chrY_G0000202;Name=ENSG00000286120
CHM13_chrY	CAT	transcript	9103053	9105045	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000683;gene_id=CHM13_chrY_G0000202;Parent=CHM13_chrY_G0000202;transcript_name=CHM13_chrY_T0000683;gene_name=ENSG00000286120;ID=CHM13_chrY_T0000683;Name=ENSG00000286120
CHM13_chrY	CAT	exon	9103053	9103198	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000683;gene_id=CHM13_chrY_G0000202;Parent=CHM13_chrY_T0000683;transcript_name=CHM13_chrY_T0000683;gene_name=ENSG00000286120;ID=exon:CHM13_chrY_T0000683:0;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9103199	9104734	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000683;gene_id=CHM13_chrY_G0000202;Parent=CHM13_chrY_T0000683;transcript_name=CHM13_chrY_T0000683;gene_name=ENSG00000286120;ID=intron:CHM13_chrY_T0000683:0;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9104735	9105045	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000683;gene_id=CHM13_chrY_G0000202;Parent=CHM13_chrY_T0000683;transcript_name=CHM13_chrY_T0000683;gene_name=ENSG00000286120;ID=exon:CHM13_chrY_T0000683:1;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9105999	9108795	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=CHM13_chrY_G0000203;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=CHM13_chrY_G0000203;Name=TSPY3
CHM13_chrY	CAT	transcript	9105999	9108795	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_G0000203;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=CHM13_chrY_T0000684;Name=TSPY3
CHM13_chrY	CAT	exon	9105999	9106530	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000684:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9106045	9106530	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000684:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9106045	9106047	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000684;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9106531	9107137	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000684:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107138	9107215	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000684:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9107138	9107215	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000684:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107216	9107343	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000684:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107344	9107455	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000684:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9107344	9107455	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000684:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107456	9107556	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000684:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107557	9107702	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000684:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9107557	9107702	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000684:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107703	9107808	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000684:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107809	9107890	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000684:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9107809	9107890	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000684:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107891	9108584	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000684:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9108585	9108795	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000684:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9108585	9108607	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000684:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9108605	9108607	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000684;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000684;transcript_name=CHM13_chrY_T0000684;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000684;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9106045	9108794	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_G0000203;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=CHM13_chrY_T0000685;Name=TSPY3
CHM13_chrY	CAT	exon	9106045	9106530	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000685:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9106045	9106530	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000685:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9106045	9106047	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000685;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9106531	9107137	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000685:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107138	9107215	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000685:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9107138	9107215	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000685:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107216	9107343	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000685:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107344	9107455	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000685:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9107344	9107455	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000685:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107456	9107556	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000685:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107557	9107702	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000685:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9107557	9107702	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000685:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107703	9107797	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000685:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107798	9107890	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000685:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9107798	9107860	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000685:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9107858	9107860	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000685;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107891	9108584	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000685:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9108585	9108794	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000685;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000685;transcript_name=CHM13_chrY_T0000685;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000685:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9106045	9108607	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_G0000203;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=CHM13_chrY_T0000686;Name=TSPY3
CHM13_chrY	CAT	exon	9106045	9106131	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000686:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9106045	9106131	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000686:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9106045	9106047	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000686;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9106132	9106392	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000686:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9106393	9106530	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000686:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9106393	9106530	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000686:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9106531	9107137	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000686:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107138	9107215	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000686:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9107138	9107215	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000686:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107216	9107343	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000686:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107344	9107455	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000686:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9107344	9107455	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000686:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107456	9107556	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000686:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107557	9107702	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000686:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9107557	9107702	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000686:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107703	9107808	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000686:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107809	9107890	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000686:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9107809	9107890	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000686:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107891	9108584	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000686:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9108585	9108607	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000686:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9108585	9108607	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000686:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9108605	9108607	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000686;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000686;transcript_name=CHM13_chrY_T0000686;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000686;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9106045	9108801	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000687;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_G0000203;transcript_name=CHM13_chrY_T0000687;gene_name=TSPY3;ID=CHM13_chrY_T0000687;Name=TSPY3
CHM13_chrY	CAT	exon	9106045	9106530	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000687;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000687;transcript_name=CHM13_chrY_T0000687;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000687:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9106531	9107137	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000687;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000687;transcript_name=CHM13_chrY_T0000687;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000687:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107138	9107215	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000687;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000687;transcript_name=CHM13_chrY_T0000687;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000687:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107216	9107343	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000687;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000687;transcript_name=CHM13_chrY_T0000687;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000687:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107344	9107890	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000687;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000687;transcript_name=CHM13_chrY_T0000687;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000687:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107891	9108017	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000687;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000687;transcript_name=CHM13_chrY_T0000687;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000687:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9108018	9108801	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000687;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000687;transcript_name=CHM13_chrY_T0000687;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000687:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9107405	9108786	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000688;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_G0000203;transcript_name=CHM13_chrY_T0000688;gene_name=TSPY3;ID=CHM13_chrY_T0000688;Name=TSPY3
CHM13_chrY	CAT	exon	9107405	9107702	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000688;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000688;transcript_name=CHM13_chrY_T0000688;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000688:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107703	9107797	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000688;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000688;transcript_name=CHM13_chrY_T0000688;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000688:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9107798	9107890	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000688;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000688;transcript_name=CHM13_chrY_T0000688;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000688:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9107891	9108584	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000688;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000688;transcript_name=CHM13_chrY_T0000688;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000688:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9108585	9108786	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000688;gene_id=CHM13_chrY_G0000203;Parent=CHM13_chrY_T0000688;transcript_name=CHM13_chrY_T0000688;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000688:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9115999	9123685	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_6;gene_id=CHM13_chrY_G0000204;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000204;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9115999	9123685	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000689;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_G0000204;transcript_name=CHM13_chrY_T0000689;gene_name=FAM197Y9;ID=CHM13_chrY_T0000689;Name=FAM197Y9
CHM13_chrY	CAT	exon	9115999	9118126	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000689;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_T0000689;transcript_name=CHM13_chrY_T0000689;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000689:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9118127	9121674	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000689;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_T0000689;transcript_name=CHM13_chrY_T0000689;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000689:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9121675	9121760	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000689;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_T0000689;transcript_name=CHM13_chrY_T0000689;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000689:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9121761	9123565	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000689;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_T0000689;transcript_name=CHM13_chrY_T0000689;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000689:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9123566	9123685	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000689;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_T0000689;transcript_name=CHM13_chrY_T0000689;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000689:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9118067	9123667	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000690;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_G0000204;transcript_name=CHM13_chrY_T0000690;gene_name=FAM197Y9;ID=CHM13_chrY_T0000690;Name=FAM197Y9
CHM13_chrY	CAT	exon	9118067	9118126	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000690;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_T0000690;transcript_name=CHM13_chrY_T0000690;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000690:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9118127	9121674	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000690;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_T0000690;transcript_name=CHM13_chrY_T0000690;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000690:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9121675	9121833	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000690;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_T0000690;transcript_name=CHM13_chrY_T0000690;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000690:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9121834	9123333	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000690;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_T0000690;transcript_name=CHM13_chrY_T0000690;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000690:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9123334	9123479	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000690;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_T0000690;transcript_name=CHM13_chrY_T0000690;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000690:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9123480	9123565	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000690;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_T0000690;transcript_name=CHM13_chrY_T0000690;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000690:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9123566	9123667	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000690;gene_id=CHM13_chrY_G0000204;Parent=CHM13_chrY_T0000690;transcript_name=CHM13_chrY_T0000690;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000690:3;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9123334	9125327	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_2;gene_id=CHM13_chrY_G0000205;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000205;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9123334	9125327	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000691;gene_id=CHM13_chrY_G0000205;Parent=CHM13_chrY_G0000205;transcript_name=CHM13_chrY_T0000691;gene_name=FAM197Y9;ID=CHM13_chrY_T0000691;Name=FAM197Y9
CHM13_chrY	CAT	exon	9123334	9123479	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000691;gene_id=CHM13_chrY_G0000205;Parent=CHM13_chrY_T0000691;transcript_name=CHM13_chrY_T0000691;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000691:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9123480	9123591	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000691;gene_id=CHM13_chrY_G0000205;Parent=CHM13_chrY_T0000691;transcript_name=CHM13_chrY_T0000691;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000691:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9123592	9123675	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000691;gene_id=CHM13_chrY_G0000205;Parent=CHM13_chrY_T0000691;transcript_name=CHM13_chrY_T0000691;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000691:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9123676	9125017	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000691;gene_id=CHM13_chrY_G0000205;Parent=CHM13_chrY_T0000691;transcript_name=CHM13_chrY_T0000691;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000691:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9125018	9125327	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000691;gene_id=CHM13_chrY_G0000205;Parent=CHM13_chrY_T0000691;transcript_name=CHM13_chrY_T0000691;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000691:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9126276	9129072	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=CHM13_chrY_G0000206;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=CHM13_chrY_G0000206;Name=TSPY3
CHM13_chrY	CAT	transcript	9126276	9129072	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_G0000206;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=CHM13_chrY_T0000692;Name=TSPY3
CHM13_chrY	CAT	exon	9126276	9126807	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000692:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9126322	9126807	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000692:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9126322	9126324	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000692;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9126808	9127414	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000692:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9127415	9127492	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000692:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9127415	9127492	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000692:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9127493	9127620	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000692:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9127621	9127732	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000692:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9127621	9127732	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000692:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9127733	9127833	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000692:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9127834	9127979	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000692:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9127834	9127979	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000692:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9127980	9128085	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000692:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9128086	9128167	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000692:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9128086	9128167	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000692:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9128168	9128861	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000692:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9128862	9129072	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000692:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9128862	9128884	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000692:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9128882	9128884	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000692;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000692;transcript_name=CHM13_chrY_T0000692;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000692;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9126322	9128884	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_G0000206;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=CHM13_chrY_T0000693;Name=TSPY3
CHM13_chrY	CAT	exon	9126322	9126408	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000693:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9126322	9126408	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000693:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9126322	9126324	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000693;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9126409	9126669	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000693:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9126670	9126807	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000693:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9126670	9126807	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000693:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9126808	9127414	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000693:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9127415	9127492	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000693:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9127415	9127492	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000693:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9127493	9127620	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000693:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9127621	9127732	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000693:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9127621	9127732	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000693:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9127733	9127833	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000693:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9127834	9127979	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000693:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9127834	9127979	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000693:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9127980	9128085	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000693:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9128086	9128167	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000693:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9128086	9128167	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000693:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9128168	9128861	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000693:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9128862	9128884	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000693:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9128862	9128884	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000693:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9128882	9128884	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000693;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000693;transcript_name=CHM13_chrY_T0000693;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000693;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9126322	9129071	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_G0000206;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=CHM13_chrY_T0000694;Name=TSPY3
CHM13_chrY	CAT	exon	9126322	9126807	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000694:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9126322	9126807	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000694:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9126322	9126324	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000694;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9126808	9127414	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000694:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9127415	9127492	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000694:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9127415	9127492	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000694:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9127493	9127620	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000694:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9127621	9127732	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000694:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9127621	9127732	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000694:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9127733	9127833	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000694:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9127834	9127979	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000694:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9127834	9127979	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000694:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9127980	9128074	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000694:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9128075	9128167	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000694:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9128075	9128137	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000694:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9128135	9128137	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000694;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9128168	9128861	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000694:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9128862	9129071	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000694;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000694;transcript_name=CHM13_chrY_T0000694;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000694:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9126322	9129078	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000695;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_G0000206;transcript_name=CHM13_chrY_T0000695;gene_name=TSPY3;ID=CHM13_chrY_T0000695;Name=TSPY3
CHM13_chrY	CAT	exon	9126322	9126807	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000695;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000695;transcript_name=CHM13_chrY_T0000695;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000695:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9126808	9127414	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000695;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000695;transcript_name=CHM13_chrY_T0000695;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000695:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9127415	9127492	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000695;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000695;transcript_name=CHM13_chrY_T0000695;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000695:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9127493	9127620	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000695;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000695;transcript_name=CHM13_chrY_T0000695;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000695:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9127621	9128167	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000695;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000695;transcript_name=CHM13_chrY_T0000695;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000695:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9128168	9128294	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000695;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000695;transcript_name=CHM13_chrY_T0000695;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000695:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9128295	9129078	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000695;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000695;transcript_name=CHM13_chrY_T0000695;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000695:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9127682	9129063	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000696;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_G0000206;transcript_name=CHM13_chrY_T0000696;gene_name=TSPY3;ID=CHM13_chrY_T0000696;Name=TSPY3
CHM13_chrY	CAT	exon	9127682	9127979	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000696;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000696;transcript_name=CHM13_chrY_T0000696;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000696:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9127980	9128074	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000696;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000696;transcript_name=CHM13_chrY_T0000696;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000696:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9128075	9128167	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000696;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000696;transcript_name=CHM13_chrY_T0000696;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000696:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9128168	9128861	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000696;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000696;transcript_name=CHM13_chrY_T0000696;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000696:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9128862	9129063	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000696;gene_id=CHM13_chrY_G0000206;Parent=CHM13_chrY_T0000696;transcript_name=CHM13_chrY_T0000696;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000696:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9138212	9143958	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000207;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000207;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9138212	9143958	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000697;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_G0000207;transcript_name=CHM13_chrY_T0000697;gene_name=FAM197Y5;ID=CHM13_chrY_T0000697;Name=FAM197Y5
CHM13_chrY	CAT	exon	9138212	9138401	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000697;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_T0000697;transcript_name=CHM13_chrY_T0000697;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000697:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9138402	9141951	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000697;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_T0000697;transcript_name=CHM13_chrY_T0000697;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000697:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9141952	9142037	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000697;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_T0000697;transcript_name=CHM13_chrY_T0000697;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000697:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9142038	9143844	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000697;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_T0000697;transcript_name=CHM13_chrY_T0000697;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000697:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9143845	9143958	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000697;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_T0000697;transcript_name=CHM13_chrY_T0000697;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000697:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9138342	9143946	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000698;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_G0000207;transcript_name=CHM13_chrY_T0000698;gene_name=FAM197Y5;ID=CHM13_chrY_T0000698;Name=FAM197Y5
CHM13_chrY	CAT	exon	9138342	9138401	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000698;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_T0000698;transcript_name=CHM13_chrY_T0000698;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000698:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9138402	9141951	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000698;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_T0000698;transcript_name=CHM13_chrY_T0000698;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000698:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9141952	9142110	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000698;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_T0000698;transcript_name=CHM13_chrY_T0000698;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000698:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9142111	9143612	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000698;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_T0000698;transcript_name=CHM13_chrY_T0000698;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000698:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9143613	9143758	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000698;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_T0000698;transcript_name=CHM13_chrY_T0000698;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000698:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9143759	9143844	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000698;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_T0000698;transcript_name=CHM13_chrY_T0000698;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000698:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9143845	9143946	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000698;gene_id=CHM13_chrY_G0000207;Parent=CHM13_chrY_T0000698;transcript_name=CHM13_chrY_T0000698;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000698:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9143613	9145605	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_6;gene_id=CHM13_chrY_G0000208;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000208;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9143613	9145605	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000699;gene_id=CHM13_chrY_G0000208;Parent=CHM13_chrY_G0000208;transcript_name=CHM13_chrY_T0000699;gene_name=FAM197Y5;ID=CHM13_chrY_T0000699;Name=FAM197Y5
CHM13_chrY	CAT	exon	9143613	9143758	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000699;gene_id=CHM13_chrY_G0000208;Parent=CHM13_chrY_T0000699;transcript_name=CHM13_chrY_T0000699;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000699:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9143759	9145294	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000699;gene_id=CHM13_chrY_G0000208;Parent=CHM13_chrY_T0000699;transcript_name=CHM13_chrY_T0000699;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000699:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9145295	9145605	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000699;gene_id=CHM13_chrY_G0000208;Parent=CHM13_chrY_T0000699;transcript_name=CHM13_chrY_T0000699;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000699:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9146559	9149355	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=CHM13_chrY_G0000209;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=CHM13_chrY_G0000209;Name=TSPY10
CHM13_chrY	CAT	transcript	9146559	9149355	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_G0000209;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=CHM13_chrY_T0000700;Name=TSPY10
CHM13_chrY	CAT	exon	9146559	9147090	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000700:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9146605	9147090	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000700:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9146605	9146607	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=start_codon:CHM13_chrY_T0000700;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9147091	9147697	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000700:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9147698	9147775	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000700:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9147698	9147775	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000700:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9147776	9147903	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000700:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9147904	9148015	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000700:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9147904	9148015	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000700:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9148016	9148116	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000700:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9148117	9148262	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000700:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9148117	9148262	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000700:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9148263	9148368	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000700:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9148369	9148450	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000700:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9148369	9148450	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000700:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9148451	9149144	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000700:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9149145	9149355	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000700:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9149145	9149167	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000700:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9149165	9149167	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000700;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000700;transcript_name=CHM13_chrY_T0000700;gene_name=TSPY10;ID=stop_codon:CHM13_chrY_T0000700;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9146605	9149354	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_G0000209;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=CHM13_chrY_T0000701;Name=TSPY10
CHM13_chrY	CAT	exon	9146605	9147090	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000701:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9146605	9147090	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000701:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9146605	9146607	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=start_codon:CHM13_chrY_T0000701;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9147091	9147697	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000701:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9147698	9147775	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000701:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9147698	9147775	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000701:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9147776	9147903	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000701:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9147904	9148015	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000701:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9147904	9148015	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000701:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9148016	9148116	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000701:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9148117	9148262	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000701:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9148117	9148262	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000701:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9148263	9148357	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000701:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9148358	9148450	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000701:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9148358	9148420	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000701:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9148418	9148420	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=stop_codon:CHM13_chrY_T0000701;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9148451	9149144	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000701:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9149145	9149354	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000701;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000701;transcript_name=CHM13_chrY_T0000701;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000701:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9146605	9149361	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000702;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_G0000209;transcript_name=CHM13_chrY_T0000702;gene_name=TSPY10;ID=CHM13_chrY_T0000702;Name=TSPY10
CHM13_chrY	CAT	exon	9146605	9147090	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000702;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000702;transcript_name=CHM13_chrY_T0000702;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000702:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9147091	9147697	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000702;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000702;transcript_name=CHM13_chrY_T0000702;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000702:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9147698	9147775	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000702;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000702;transcript_name=CHM13_chrY_T0000702;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000702:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9147776	9147903	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000702;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000702;transcript_name=CHM13_chrY_T0000702;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000702:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9147904	9148450	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000702;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000702;transcript_name=CHM13_chrY_T0000702;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000702:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9148451	9148577	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000702;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000702;transcript_name=CHM13_chrY_T0000702;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000702:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9148578	9149361	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000702;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000702;transcript_name=CHM13_chrY_T0000702;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000702:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9147965	9149346	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000703;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_G0000209;transcript_name=CHM13_chrY_T0000703;gene_name=TSPY10;ID=CHM13_chrY_T0000703;Name=TSPY10
CHM13_chrY	CAT	exon	9147965	9148262	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000703;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000703;transcript_name=CHM13_chrY_T0000703;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000703:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9148263	9148368	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000703;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000703;transcript_name=CHM13_chrY_T0000703;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000703:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9148369	9148450	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000703;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000703;transcript_name=CHM13_chrY_T0000703;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000703:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9148451	9149144	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000703;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000703;transcript_name=CHM13_chrY_T0000703;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000703:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9149145	9149346	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000703;gene_id=CHM13_chrY_G0000209;Parent=CHM13_chrY_T0000703;transcript_name=CHM13_chrY_T0000703;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000703:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9158486	9164219	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000210;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000210;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9158486	9164219	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000704;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_G0000210;transcript_name=CHM13_chrY_T0000704;gene_name=FAM197Y5;ID=CHM13_chrY_T0000704;Name=FAM197Y5
CHM13_chrY	CAT	exon	9158486	9158675	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000704;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_T0000704;transcript_name=CHM13_chrY_T0000704;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000704:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9158676	9162224	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000704;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_T0000704;transcript_name=CHM13_chrY_T0000704;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000704:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9162225	9162310	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000704;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_T0000704;transcript_name=CHM13_chrY_T0000704;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000704:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9162311	9164105	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000704;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_T0000704;transcript_name=CHM13_chrY_T0000704;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000704:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9164106	9164219	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000704;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_T0000704;transcript_name=CHM13_chrY_T0000704;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000704:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9158616	9164207	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000705;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_G0000210;transcript_name=CHM13_chrY_T0000705;gene_name=FAM197Y5;ID=CHM13_chrY_T0000705;Name=FAM197Y5
CHM13_chrY	CAT	exon	9158616	9158675	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000705;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_T0000705;transcript_name=CHM13_chrY_T0000705;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000705:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9158676	9162224	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000705;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_T0000705;transcript_name=CHM13_chrY_T0000705;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000705:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9162225	9162383	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000705;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_T0000705;transcript_name=CHM13_chrY_T0000705;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000705:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9162384	9163873	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000705;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_T0000705;transcript_name=CHM13_chrY_T0000705;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000705:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9163874	9164019	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000705;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_T0000705;transcript_name=CHM13_chrY_T0000705;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000705:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9164020	9164105	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000705;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_T0000705;transcript_name=CHM13_chrY_T0000705;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000705:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9164106	9164207	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000705;gene_id=CHM13_chrY_G0000210;Parent=CHM13_chrY_T0000705;transcript_name=CHM13_chrY_T0000705;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000705:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9163874	9165866	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_11;gene_id=CHM13_chrY_G0000211;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000211;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9163874	9165866	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000706;gene_id=CHM13_chrY_G0000211;Parent=CHM13_chrY_G0000211;transcript_name=CHM13_chrY_T0000706;gene_name=FAM197Y5;ID=CHM13_chrY_T0000706;Name=FAM197Y5
CHM13_chrY	CAT	exon	9163874	9164019	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000706;gene_id=CHM13_chrY_G0000211;Parent=CHM13_chrY_T0000706;transcript_name=CHM13_chrY_T0000706;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000706:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9164020	9165555	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000706;gene_id=CHM13_chrY_G0000211;Parent=CHM13_chrY_T0000706;transcript_name=CHM13_chrY_T0000706;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000706:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9165556	9165866	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000706;gene_id=CHM13_chrY_G0000211;Parent=CHM13_chrY_T0000706;transcript_name=CHM13_chrY_T0000706;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000706:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9166820	9169634	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=CHM13_chrY_G0000212;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=CHM13_chrY_G0000212;Name=TSPY4
CHM13_chrY	CAT	transcript	9166820	9169513	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_G0000212;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=CHM13_chrY_T0000707;Name=TSPY4
CHM13_chrY	CAT	exon	9166820	9166952	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000707:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9166866	9166952	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000707:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9166866	9166868	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000707;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9166953	9167231	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000707:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9167232	9167369	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000707:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9167232	9167369	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000707:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9167370	9167976	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000707:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9167977	9168054	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000707:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9167977	9168054	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000707:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168055	9168182	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000707:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9168183	9168294	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000707:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9168183	9168294	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000707:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168295	9168395	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000707:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9168396	9168541	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000707:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9168396	9168541	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000707:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168542	9168647	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000707:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9168648	9168729	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000707:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9168648	9168729	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000707:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168730	9169423	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000707:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9169424	9169513	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000707:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9169424	9169446	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000707:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9169444	9169446	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000707;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000707;transcript_name=CHM13_chrY_T0000707;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000707;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9166820	9169634	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_G0000212;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=CHM13_chrY_T0000708;Name=TSPY4
CHM13_chrY	CAT	exon	9166820	9167369	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000708:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9166866	9167369	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000708:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9166866	9166868	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000708;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9167370	9167976	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000708:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9167977	9168054	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000708:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9167977	9168054	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000708:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168055	9168182	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000708:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9168183	9168294	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000708:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9168183	9168294	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000708:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168295	9168395	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000708:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9168396	9168541	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000708:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9168396	9168541	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000708:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168542	9168647	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000708:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9168648	9168729	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000708:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9168648	9168729	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000708:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168730	9169423	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000708:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9169424	9169634	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000708:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9169424	9169446	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000708:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9169444	9169446	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000708;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000708;transcript_name=CHM13_chrY_T0000708;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000708;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9166866	9169633	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_G0000212;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=CHM13_chrY_T0000709;Name=TSPY4
CHM13_chrY	CAT	exon	9166866	9167369	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000709:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9166866	9167369	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000709:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9166866	9166868	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000709;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9167370	9167976	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000709:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9167977	9168054	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000709:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9167977	9168054	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000709:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168055	9168182	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000709:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9168183	9168294	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000709:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9168183	9168294	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000709:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168295	9168395	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000709:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9168396	9168541	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000709:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9168396	9168541	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000709:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168542	9168636	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000709:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9168637	9168729	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000709:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9168637	9168699	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000709:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9168697	9168699	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000709;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168730	9169423	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000709:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9169424	9169633	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000709;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000709;transcript_name=CHM13_chrY_T0000709;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000709:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9166866	9169640	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000710;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_G0000212;transcript_name=CHM13_chrY_T0000710;gene_name=TSPY4;ID=CHM13_chrY_T0000710;Name=TSPY4
CHM13_chrY	CAT	exon	9166866	9167369	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000710;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000710;transcript_name=CHM13_chrY_T0000710;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000710:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9167370	9167976	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000710;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000710;transcript_name=CHM13_chrY_T0000710;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000710:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9167977	9168054	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000710;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000710;transcript_name=CHM13_chrY_T0000710;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000710:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168055	9168182	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000710;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000710;transcript_name=CHM13_chrY_T0000710;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000710:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9168183	9168729	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000710;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000710;transcript_name=CHM13_chrY_T0000710;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000710:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168730	9168856	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000710;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000710;transcript_name=CHM13_chrY_T0000710;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000710:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9168857	9169640	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000710;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000710;transcript_name=CHM13_chrY_T0000710;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000710:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9168244	9169625	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000711;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_G0000212;transcript_name=CHM13_chrY_T0000711;gene_name=TSPY4;ID=CHM13_chrY_T0000711;Name=TSPY4
CHM13_chrY	CAT	exon	9168244	9168541	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000711;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000711;transcript_name=CHM13_chrY_T0000711;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000711:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168542	9168636	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000711;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000711;transcript_name=CHM13_chrY_T0000711;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000711:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9168637	9168729	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000711;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000711;transcript_name=CHM13_chrY_T0000711;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000711:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9168730	9169423	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000711;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000711;transcript_name=CHM13_chrY_T0000711;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000711:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9169424	9169625	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000711;gene_id=CHM13_chrY_G0000212;Parent=CHM13_chrY_T0000711;transcript_name=CHM13_chrY_T0000711;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000711:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9178793	9184532	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000213;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000213;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9178793	9184532	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000712;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_G0000213;transcript_name=CHM13_chrY_T0000712;gene_name=FAM197Y5;ID=CHM13_chrY_T0000712;Name=FAM197Y5
CHM13_chrY	CAT	exon	9178793	9178982	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000712;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_T0000712;transcript_name=CHM13_chrY_T0000712;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000712:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9178983	9182531	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000712;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_T0000712;transcript_name=CHM13_chrY_T0000712;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000712:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9182532	9182617	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000712;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_T0000712;transcript_name=CHM13_chrY_T0000712;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000712:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9182618	9184418	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000712;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_T0000712;transcript_name=CHM13_chrY_T0000712;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000712:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9184419	9184532	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000712;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_T0000712;transcript_name=CHM13_chrY_T0000712;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000712:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9178923	9184520	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000713;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_G0000213;transcript_name=CHM13_chrY_T0000713;gene_name=FAM197Y5;ID=CHM13_chrY_T0000713;Name=FAM197Y5
CHM13_chrY	CAT	exon	9178923	9178982	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000713;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_T0000713;transcript_name=CHM13_chrY_T0000713;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000713:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9178983	9182531	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000713;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_T0000713;transcript_name=CHM13_chrY_T0000713;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000713:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9182532	9182690	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000713;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_T0000713;transcript_name=CHM13_chrY_T0000713;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000713:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9182691	9184186	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000713;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_T0000713;transcript_name=CHM13_chrY_T0000713;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000713:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9184187	9184332	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000713;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_T0000713;transcript_name=CHM13_chrY_T0000713;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000713:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9184333	9184418	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000713;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_T0000713;transcript_name=CHM13_chrY_T0000713;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000713:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9184419	9184520	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000713;gene_id=CHM13_chrY_G0000213;Parent=CHM13_chrY_T0000713;transcript_name=CHM13_chrY_T0000713;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000713:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9184187	9186179	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_5;gene_id=CHM13_chrY_G0000214;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000214;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9184187	9186179	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000714;gene_id=CHM13_chrY_G0000214;Parent=CHM13_chrY_G0000214;transcript_name=CHM13_chrY_T0000714;gene_name=FAM197Y5;ID=CHM13_chrY_T0000714;Name=FAM197Y5
CHM13_chrY	CAT	exon	9184187	9184332	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000714;gene_id=CHM13_chrY_G0000214;Parent=CHM13_chrY_T0000714;transcript_name=CHM13_chrY_T0000714;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000714:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9184333	9185868	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000714;gene_id=CHM13_chrY_G0000214;Parent=CHM13_chrY_T0000714;transcript_name=CHM13_chrY_T0000714;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000714:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9185869	9186179	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000714;gene_id=CHM13_chrY_G0000214;Parent=CHM13_chrY_T0000714;transcript_name=CHM13_chrY_T0000714;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000714:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9187133	9189929	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;alternative_source_transcripts=ENST00000457222.6;gene_id=CHM13_chrY_G0000215;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=CHM13_chrY_G0000215;Name=TSPY3
CHM13_chrY	CAT	transcript	9187133	9189929	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_G0000215;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=CHM13_chrY_T0000715;Name=TSPY3
CHM13_chrY	CAT	exon	9187133	9187664	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000715:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9187179	9187664	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000715:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9187179	9187181	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000715;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9187665	9188271	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000715:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188272	9188349	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000715:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9188272	9188349	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000715:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9188350	9188477	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000715:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188478	9188589	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000715:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9188478	9188589	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000715:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9188590	9188690	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000715:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188691	9188836	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000715:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9188691	9188836	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000715:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9188837	9188942	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000715:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188943	9189024	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000715:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9188943	9189024	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000715:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9189025	9189718	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000715:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9189719	9189929	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000715:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9189719	9189741	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000715:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9189739	9189741	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=CHM13_chrY_T0000715;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000715;transcript_name=CHM13_chrY_T0000715;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000715;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9187179	9189928	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_G0000215;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=CHM13_chrY_T0000716;Name=TSPY3
CHM13_chrY	CAT	exon	9187179	9187664	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000716:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9187179	9187664	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000716:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9187179	9187181	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000716;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9187665	9188271	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000716:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188272	9188349	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000716:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9188272	9188349	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000716:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9188350	9188477	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000716:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188478	9188589	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000716:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9188478	9188589	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000716:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9188590	9188690	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000716:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188691	9188836	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000716:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9188691	9188836	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000716:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9188837	9188931	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000716:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188932	9189024	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000716:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9188932	9188994	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000716:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9188992	9188994	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000716;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9189025	9189718	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000716:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9189719	9189928	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=CHM13_chrY_T0000716;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000716;transcript_name=CHM13_chrY_T0000716;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000716:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9187179	9189741	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_G0000215;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=CHM13_chrY_T0000717;Name=TSPY3
CHM13_chrY	CAT	exon	9187179	9187265	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000717:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9187179	9187265	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000717:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9187179	9187181	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000717;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9187266	9187526	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000717:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9187527	9187664	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000717:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9187527	9187664	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000717:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9187665	9188271	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000717:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188272	9188349	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000717:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9188272	9188349	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000717:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9188350	9188477	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000717:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188478	9188589	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000717:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9188478	9188589	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000717:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9188590	9188690	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000717:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188691	9188836	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000717:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9188691	9188836	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000717:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9188837	9188942	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000717:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188943	9189024	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000717:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9188943	9189024	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000717:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9189025	9189718	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000717:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9189719	9189741	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000717:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9189719	9189741	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000717:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9189739	9189741	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=CHM13_chrY_T0000717;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000717;transcript_name=CHM13_chrY_T0000717;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000717;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9187179	9189935	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000718;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_G0000215;transcript_name=CHM13_chrY_T0000718;gene_name=TSPY3;ID=CHM13_chrY_T0000718;Name=TSPY3
CHM13_chrY	CAT	exon	9187179	9187664	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000718;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000718;transcript_name=CHM13_chrY_T0000718;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000718:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9187665	9188271	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000718;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000718;transcript_name=CHM13_chrY_T0000718;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000718:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188272	9188349	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000718;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000718;transcript_name=CHM13_chrY_T0000718;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000718:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9188350	9188477	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000718;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000718;transcript_name=CHM13_chrY_T0000718;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000718:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188478	9189024	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000718;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000718;transcript_name=CHM13_chrY_T0000718;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000718:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9189025	9189151	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000718;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000718;transcript_name=CHM13_chrY_T0000718;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000718:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9189152	9189935	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=CHM13_chrY_T0000718;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000718;transcript_name=CHM13_chrY_T0000718;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000718:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9188539	9189920	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=CHM13_chrY_T0000719;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_G0000215;transcript_name=CHM13_chrY_T0000719;gene_name=TSPY3;ID=CHM13_chrY_T0000719;Name=TSPY3
CHM13_chrY	CAT	exon	9188539	9188836	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=CHM13_chrY_T0000719;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000719;transcript_name=CHM13_chrY_T0000719;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000719:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9188837	9188931	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=CHM13_chrY_T0000719;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000719;transcript_name=CHM13_chrY_T0000719;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000719:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9188932	9189024	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=CHM13_chrY_T0000719;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000719;transcript_name=CHM13_chrY_T0000719;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000719:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9189025	9189718	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=CHM13_chrY_T0000719;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000719;transcript_name=CHM13_chrY_T0000719;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000719:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9189719	9189920	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=CHM13_chrY_T0000719;gene_id=CHM13_chrY_G0000215;Parent=CHM13_chrY_T0000719;transcript_name=CHM13_chrY_T0000719;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000719:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9197129	9205017	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7_4;gene_id=CHM13_chrY_G0000216;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=CHM13_chrY_G0000216;Name=FAM197Y7
CHM13_chrY	CAT	transcript	9197129	9205017	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000720;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_G0000216;transcript_name=CHM13_chrY_T0000720;gene_name=FAM197Y7;ID=CHM13_chrY_T0000720;Name=FAM197Y7
CHM13_chrY	CAT	exon	9197129	9199252	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000720;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000720;transcript_name=CHM13_chrY_T0000720;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000720:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9199253	9202803	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000720;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000720;transcript_name=CHM13_chrY_T0000720;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000720:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9202804	9202889	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000720;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000720;transcript_name=CHM13_chrY_T0000720;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000720:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9202890	9204696	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000720;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000720;transcript_name=CHM13_chrY_T0000720;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000720:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9204697	9204806	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000720;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000720;transcript_name=CHM13_chrY_T0000720;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000720:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9204807	9205002	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000720;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000720;transcript_name=CHM13_chrY_T0000720;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000720:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9205003	9205017	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000720;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000720;transcript_name=CHM13_chrY_T0000720;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000720:3;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9199193	9204798	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000721;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_G0000216;transcript_name=CHM13_chrY_T0000721;gene_name=FAM197Y7;ID=CHM13_chrY_T0000721;Name=FAM197Y7
CHM13_chrY	CAT	exon	9199193	9199252	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000721;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000721;transcript_name=CHM13_chrY_T0000721;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000721:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9199253	9202803	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000721;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000721;transcript_name=CHM13_chrY_T0000721;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000721:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9202804	9202962	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000721;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000721;transcript_name=CHM13_chrY_T0000721;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000721:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9202963	9204464	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000721;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000721;transcript_name=CHM13_chrY_T0000721;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000721:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9204465	9204610	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000721;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000721;transcript_name=CHM13_chrY_T0000721;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000721:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9204611	9204696	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000721;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000721;transcript_name=CHM13_chrY_T0000721;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000721:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9204697	9204798	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000721;gene_id=CHM13_chrY_G0000216;Parent=CHM13_chrY_T0000721;transcript_name=CHM13_chrY_T0000721;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000721:3;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9204465	9206457	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1_2;gene_id=CHM13_chrY_G0000217;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=CHM13_chrY_G0000217;Name=ENSG00000286120
CHM13_chrY	CAT	transcript	9204465	9206457	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000722;gene_id=CHM13_chrY_G0000217;Parent=CHM13_chrY_G0000217;transcript_name=CHM13_chrY_T0000722;gene_name=ENSG00000286120;ID=CHM13_chrY_T0000722;Name=ENSG00000286120
CHM13_chrY	CAT	exon	9204465	9204610	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000722;gene_id=CHM13_chrY_G0000217;Parent=CHM13_chrY_T0000722;transcript_name=CHM13_chrY_T0000722;gene_name=ENSG00000286120;ID=exon:CHM13_chrY_T0000722:0;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9204611	9206146	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000722;gene_id=CHM13_chrY_G0000217;Parent=CHM13_chrY_T0000722;transcript_name=CHM13_chrY_T0000722;gene_name=ENSG00000286120;ID=intron:CHM13_chrY_T0000722:0;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9206147	9206457	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000722;gene_id=CHM13_chrY_G0000217;Parent=CHM13_chrY_T0000722;transcript_name=CHM13_chrY_T0000722;gene_name=ENSG00000286120;ID=exon:CHM13_chrY_T0000722:1;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9207411	9210207	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=CHM13_chrY_G0000218;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=CHM13_chrY_G0000218;Name=TSPY3
CHM13_chrY	CAT	transcript	9207411	9210207	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_G0000218;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=CHM13_chrY_T0000723;Name=TSPY3
CHM13_chrY	CAT	exon	9207411	9207942	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000723:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9207457	9207942	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000723:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9207457	9207459	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000723;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9207943	9208549	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000723:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9208550	9208627	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000723:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9208550	9208627	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000723:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9208628	9208755	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000723:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9208756	9208867	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000723:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9208756	9208867	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000723:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9208868	9208968	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000723:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9208969	9209114	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000723:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9208969	9209114	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000723:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9209115	9209220	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000723:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9209221	9209302	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000723:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9209221	9209302	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000723:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9209303	9209996	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000723:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9209997	9210207	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000723:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9209997	9210019	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000723:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9210017	9210019	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000723;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000723;transcript_name=CHM13_chrY_T0000723;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000723;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9207457	9210206	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_G0000218;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=CHM13_chrY_T0000724;Name=TSPY3
CHM13_chrY	CAT	exon	9207457	9207942	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000724:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9207457	9207942	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000724:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9207457	9207459	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000724;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9207943	9208549	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000724:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9208550	9208627	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000724:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9208550	9208627	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000724:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9208628	9208755	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000724:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9208756	9208867	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000724:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9208756	9208867	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000724:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9208868	9208968	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000724:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9208969	9209114	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000724:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9208969	9209114	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000724:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9209115	9209209	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000724:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9209210	9209302	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000724:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9209210	9209272	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000724:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9209270	9209272	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000724;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9209303	9209996	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000724:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9209997	9210206	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000724;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000724;transcript_name=CHM13_chrY_T0000724;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000724:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9207457	9210019	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_G0000218;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=CHM13_chrY_T0000725;Name=TSPY3
CHM13_chrY	CAT	exon	9207457	9207543	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000725:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9207457	9207543	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000725:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9207457	9207459	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000725;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9207544	9207804	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000725:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9207805	9207942	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000725:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9207805	9207942	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000725:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9207943	9208549	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000725:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9208550	9208627	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000725:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9208550	9208627	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000725:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9208628	9208755	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000725:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9208756	9208867	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000725:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9208756	9208867	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000725:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9208868	9208968	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000725:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9208969	9209114	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000725:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9208969	9209114	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000725:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9209115	9209220	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000725:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9209221	9209302	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000725:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9209221	9209302	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000725:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9209303	9209996	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000725:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9209997	9210019	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000725:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9209997	9210019	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000725:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9210017	9210019	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000725;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000725;transcript_name=CHM13_chrY_T0000725;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000725;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9207457	9210213	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000726;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_G0000218;transcript_name=CHM13_chrY_T0000726;gene_name=TSPY3;ID=CHM13_chrY_T0000726;Name=TSPY3
CHM13_chrY	CAT	exon	9207457	9207942	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000726;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000726;transcript_name=CHM13_chrY_T0000726;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000726:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9207943	9208549	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000726;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000726;transcript_name=CHM13_chrY_T0000726;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000726:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9208550	9208627	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000726;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000726;transcript_name=CHM13_chrY_T0000726;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000726:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9208628	9208755	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000726;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000726;transcript_name=CHM13_chrY_T0000726;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000726:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9208756	9209302	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000726;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000726;transcript_name=CHM13_chrY_T0000726;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000726:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9209303	9209429	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000726;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000726;transcript_name=CHM13_chrY_T0000726;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000726:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9209430	9210213	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000726;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000726;transcript_name=CHM13_chrY_T0000726;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000726:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9208817	9210198	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000727;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_G0000218;transcript_name=CHM13_chrY_T0000727;gene_name=TSPY3;ID=CHM13_chrY_T0000727;Name=TSPY3
CHM13_chrY	CAT	exon	9208817	9209114	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000727;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000727;transcript_name=CHM13_chrY_T0000727;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000727:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9209115	9209209	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000727;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000727;transcript_name=CHM13_chrY_T0000727;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000727:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9209210	9209302	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000727;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000727;transcript_name=CHM13_chrY_T0000727;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000727:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9209303	9209996	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000727;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000727;transcript_name=CHM13_chrY_T0000727;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000727:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9209997	9210198	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000727;gene_id=CHM13_chrY_G0000218;Parent=CHM13_chrY_T0000727;transcript_name=CHM13_chrY_T0000727;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000727:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9217411	9225097	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_3;gene_id=CHM13_chrY_G0000219;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000219;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9217411	9225097	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000728;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_G0000219;transcript_name=CHM13_chrY_T0000728;gene_name=FAM197Y9;ID=CHM13_chrY_T0000728;Name=FAM197Y9
CHM13_chrY	CAT	exon	9217411	9219538	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000728;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_T0000728;transcript_name=CHM13_chrY_T0000728;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000728:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9219539	9223086	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000728;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_T0000728;transcript_name=CHM13_chrY_T0000728;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000728:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9223087	9223172	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000728;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_T0000728;transcript_name=CHM13_chrY_T0000728;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000728:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9223173	9224977	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000728;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_T0000728;transcript_name=CHM13_chrY_T0000728;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000728:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9224978	9225097	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000728;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_T0000728;transcript_name=CHM13_chrY_T0000728;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000728:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9219479	9225079	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000729;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_G0000219;transcript_name=CHM13_chrY_T0000729;gene_name=FAM197Y9;ID=CHM13_chrY_T0000729;Name=FAM197Y9
CHM13_chrY	CAT	exon	9219479	9219538	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000729;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_T0000729;transcript_name=CHM13_chrY_T0000729;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000729:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9219539	9223086	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000729;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_T0000729;transcript_name=CHM13_chrY_T0000729;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000729:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9223087	9223245	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000729;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_T0000729;transcript_name=CHM13_chrY_T0000729;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000729:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9223246	9224745	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000729;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_T0000729;transcript_name=CHM13_chrY_T0000729;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000729:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9224746	9224891	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000729;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_T0000729;transcript_name=CHM13_chrY_T0000729;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000729:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9224892	9224977	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000729;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_T0000729;transcript_name=CHM13_chrY_T0000729;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000729:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9224978	9225079	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000729;gene_id=CHM13_chrY_G0000219;Parent=CHM13_chrY_T0000729;transcript_name=CHM13_chrY_T0000729;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000729:3;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9224746	9226739	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_5;gene_id=CHM13_chrY_G0000220;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000220;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9224746	9226739	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000730;gene_id=CHM13_chrY_G0000220;Parent=CHM13_chrY_G0000220;transcript_name=CHM13_chrY_T0000730;gene_name=FAM197Y9;ID=CHM13_chrY_T0000730;Name=FAM197Y9
CHM13_chrY	CAT	exon	9224746	9224891	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000730;gene_id=CHM13_chrY_G0000220;Parent=CHM13_chrY_T0000730;transcript_name=CHM13_chrY_T0000730;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000730:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9224892	9225003	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000730;gene_id=CHM13_chrY_G0000220;Parent=CHM13_chrY_T0000730;transcript_name=CHM13_chrY_T0000730;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000730:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9225004	9225087	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000730;gene_id=CHM13_chrY_G0000220;Parent=CHM13_chrY_T0000730;transcript_name=CHM13_chrY_T0000730;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000730:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9225088	9226429	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000730;gene_id=CHM13_chrY_G0000220;Parent=CHM13_chrY_T0000730;transcript_name=CHM13_chrY_T0000730;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000730:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9226430	9226739	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000730;gene_id=CHM13_chrY_G0000220;Parent=CHM13_chrY_T0000730;transcript_name=CHM13_chrY_T0000730;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000730:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9227688	9230484	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=CHM13_chrY_G0000221;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=CHM13_chrY_G0000221;Name=TSPY3
CHM13_chrY	CAT	transcript	9227688	9230484	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_G0000221;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=CHM13_chrY_T0000731;Name=TSPY3
CHM13_chrY	CAT	exon	9227688	9228219	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000731:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9227734	9228219	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000731:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9227734	9227736	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000731;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9228220	9228826	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000731:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9228827	9228904	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000731:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9228827	9228904	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000731:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9228905	9229032	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000731:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9229033	9229144	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000731:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9229033	9229144	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000731:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9229145	9229245	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000731:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9229246	9229391	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000731:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9229246	9229391	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000731:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9229392	9229497	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000731:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9229498	9229579	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000731:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9229498	9229579	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000731:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9229580	9230273	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000731:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9230274	9230484	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000731:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9230274	9230296	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000731:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9230294	9230296	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000731;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000731;transcript_name=CHM13_chrY_T0000731;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000731;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9227734	9230296	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_G0000221;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=CHM13_chrY_T0000732;Name=TSPY3
CHM13_chrY	CAT	exon	9227734	9227820	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000732:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9227734	9227820	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000732:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9227734	9227736	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000732;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9227821	9228081	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000732:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9228082	9228219	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000732:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9228082	9228219	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000732:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9228220	9228826	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000732:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9228827	9228904	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000732:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9228827	9228904	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000732:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9228905	9229032	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000732:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9229033	9229144	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000732:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9229033	9229144	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000732:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9229145	9229245	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000732:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9229246	9229391	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000732:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9229246	9229391	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000732:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9229392	9229497	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000732:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9229498	9229579	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000732:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9229498	9229579	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000732:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9229580	9230273	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000732:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9230274	9230296	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000732:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9230274	9230296	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000732:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9230294	9230296	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000732;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000732;transcript_name=CHM13_chrY_T0000732;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000732;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9227734	9230483	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_G0000221;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=CHM13_chrY_T0000733;Name=TSPY3
CHM13_chrY	CAT	exon	9227734	9228219	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000733:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9227734	9228219	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000733:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9227734	9227736	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000733;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9228220	9228826	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000733:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9228827	9228904	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000733:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9228827	9228904	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000733:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9228905	9229032	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000733:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9229033	9229144	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000733:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9229033	9229144	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000733:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9229145	9229245	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000733:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9229246	9229391	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000733:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9229246	9229391	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000733:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9229392	9229486	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000733:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9229487	9229579	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000733:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9229487	9229549	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000733:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9229547	9229549	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000733;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9229580	9230273	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000733:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9230274	9230483	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000733;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000733;transcript_name=CHM13_chrY_T0000733;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000733:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9227734	9230490	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000734;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_G0000221;transcript_name=CHM13_chrY_T0000734;gene_name=TSPY3;ID=CHM13_chrY_T0000734;Name=TSPY3
CHM13_chrY	CAT	exon	9227734	9228219	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000734;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000734;transcript_name=CHM13_chrY_T0000734;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000734:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9228220	9228826	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000734;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000734;transcript_name=CHM13_chrY_T0000734;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000734:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9228827	9228904	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000734;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000734;transcript_name=CHM13_chrY_T0000734;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000734:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9228905	9229032	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000734;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000734;transcript_name=CHM13_chrY_T0000734;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000734:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9229033	9229579	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000734;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000734;transcript_name=CHM13_chrY_T0000734;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000734:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9229580	9229706	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000734;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000734;transcript_name=CHM13_chrY_T0000734;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000734:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9229707	9230490	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000734;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000734;transcript_name=CHM13_chrY_T0000734;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000734:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9229094	9230475	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000735;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_G0000221;transcript_name=CHM13_chrY_T0000735;gene_name=TSPY3;ID=CHM13_chrY_T0000735;Name=TSPY3
CHM13_chrY	CAT	exon	9229094	9229391	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000735;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000735;transcript_name=CHM13_chrY_T0000735;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000735:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9229392	9229486	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000735;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000735;transcript_name=CHM13_chrY_T0000735;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000735:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9229487	9229579	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000735;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000735;transcript_name=CHM13_chrY_T0000735;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000735:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9229580	9230273	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000735;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000735;transcript_name=CHM13_chrY_T0000735;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000735:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9230274	9230475	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000735;gene_id=CHM13_chrY_G0000221;Parent=CHM13_chrY_T0000735;transcript_name=CHM13_chrY_T0000735;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000735:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9239624	9245370	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000222;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000222;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9239624	9245370	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000736;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_G0000222;transcript_name=CHM13_chrY_T0000736;gene_name=FAM197Y5;ID=CHM13_chrY_T0000736;Name=FAM197Y5
CHM13_chrY	CAT	exon	9239624	9239813	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000736;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_T0000736;transcript_name=CHM13_chrY_T0000736;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000736:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9239814	9243363	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000736;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_T0000736;transcript_name=CHM13_chrY_T0000736;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000736:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9243364	9243449	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000736;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_T0000736;transcript_name=CHM13_chrY_T0000736;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000736:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9243450	9245256	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000736;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_T0000736;transcript_name=CHM13_chrY_T0000736;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000736:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9245257	9245370	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000736;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_T0000736;transcript_name=CHM13_chrY_T0000736;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000736:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9239754	9245358	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000737;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_G0000222;transcript_name=CHM13_chrY_T0000737;gene_name=FAM197Y5;ID=CHM13_chrY_T0000737;Name=FAM197Y5
CHM13_chrY	CAT	exon	9239754	9239813	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000737;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_T0000737;transcript_name=CHM13_chrY_T0000737;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000737:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9239814	9243363	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000737;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_T0000737;transcript_name=CHM13_chrY_T0000737;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000737:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9243364	9243522	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000737;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_T0000737;transcript_name=CHM13_chrY_T0000737;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000737:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9243523	9245024	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000737;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_T0000737;transcript_name=CHM13_chrY_T0000737;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000737:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9245025	9245170	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000737;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_T0000737;transcript_name=CHM13_chrY_T0000737;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000737:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9245171	9245256	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000737;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_T0000737;transcript_name=CHM13_chrY_T0000737;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000737:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9245257	9245358	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000737;gene_id=CHM13_chrY_G0000222;Parent=CHM13_chrY_T0000737;transcript_name=CHM13_chrY_T0000737;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000737:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9245025	9247017	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_10;gene_id=CHM13_chrY_G0000223;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000223;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9245025	9247017	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000738;gene_id=CHM13_chrY_G0000223;Parent=CHM13_chrY_G0000223;transcript_name=CHM13_chrY_T0000738;gene_name=FAM197Y5;ID=CHM13_chrY_T0000738;Name=FAM197Y5
CHM13_chrY	CAT	exon	9245025	9245170	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000738;gene_id=CHM13_chrY_G0000223;Parent=CHM13_chrY_T0000738;transcript_name=CHM13_chrY_T0000738;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000738:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9245171	9246706	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000738;gene_id=CHM13_chrY_G0000223;Parent=CHM13_chrY_T0000738;transcript_name=CHM13_chrY_T0000738;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000738:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9246707	9247017	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000738;gene_id=CHM13_chrY_G0000223;Parent=CHM13_chrY_T0000738;transcript_name=CHM13_chrY_T0000738;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000738:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9247971	9250767	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=CHM13_chrY_G0000224;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=CHM13_chrY_G0000224;Name=TSPY10
CHM13_chrY	CAT	transcript	9247971	9250767	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_G0000224;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=CHM13_chrY_T0000739;Name=TSPY10
CHM13_chrY	CAT	exon	9247971	9248502	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000739:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9248017	9248502	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000739:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9248017	9248019	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=start_codon:CHM13_chrY_T0000739;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9248503	9249109	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000739:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9249110	9249187	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000739:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9249110	9249187	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000739:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9249188	9249315	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000739:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9249316	9249427	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000739:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9249316	9249427	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000739:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9249428	9249528	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000739:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9249529	9249674	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000739:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9249529	9249674	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000739:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9249675	9249780	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000739:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9249781	9249862	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000739:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9249781	9249862	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000739:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9249863	9250556	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000739:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9250557	9250767	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000739:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9250557	9250579	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000739:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9250577	9250579	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000739;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000739;transcript_name=CHM13_chrY_T0000739;gene_name=TSPY10;ID=stop_codon:CHM13_chrY_T0000739;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9248017	9250766	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_G0000224;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=CHM13_chrY_T0000740;Name=TSPY10
CHM13_chrY	CAT	exon	9248017	9248502	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000740:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9248017	9248502	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000740:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9248017	9248019	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=start_codon:CHM13_chrY_T0000740;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9248503	9249109	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000740:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9249110	9249187	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000740:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9249110	9249187	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000740:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9249188	9249315	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000740:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9249316	9249427	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000740:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9249316	9249427	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000740:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9249428	9249528	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000740:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9249529	9249674	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000740:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9249529	9249674	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000740:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9249675	9249769	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000740:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9249770	9249862	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000740:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9249770	9249832	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000740:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9249830	9249832	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=stop_codon:CHM13_chrY_T0000740;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9249863	9250556	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000740:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9250557	9250766	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000740;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000740;transcript_name=CHM13_chrY_T0000740;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000740:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9248017	9250773	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000741;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_G0000224;transcript_name=CHM13_chrY_T0000741;gene_name=TSPY10;ID=CHM13_chrY_T0000741;Name=TSPY10
CHM13_chrY	CAT	exon	9248017	9248502	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000741;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000741;transcript_name=CHM13_chrY_T0000741;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000741:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9248503	9249109	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000741;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000741;transcript_name=CHM13_chrY_T0000741;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000741:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9249110	9249187	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000741;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000741;transcript_name=CHM13_chrY_T0000741;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000741:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9249188	9249315	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000741;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000741;transcript_name=CHM13_chrY_T0000741;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000741:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9249316	9249862	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000741;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000741;transcript_name=CHM13_chrY_T0000741;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000741:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9249863	9249989	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000741;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000741;transcript_name=CHM13_chrY_T0000741;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000741:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9249990	9250773	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000741;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000741;transcript_name=CHM13_chrY_T0000741;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000741:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9249377	9250758	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000742;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_G0000224;transcript_name=CHM13_chrY_T0000742;gene_name=TSPY10;ID=CHM13_chrY_T0000742;Name=TSPY10
CHM13_chrY	CAT	exon	9249377	9249674	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000742;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000742;transcript_name=CHM13_chrY_T0000742;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000742:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9249675	9249780	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000742;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000742;transcript_name=CHM13_chrY_T0000742;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000742:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9249781	9249862	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000742;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000742;transcript_name=CHM13_chrY_T0000742;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000742:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9249863	9250556	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000742;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000742;transcript_name=CHM13_chrY_T0000742;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000742:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9250557	9250758	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000742;gene_id=CHM13_chrY_G0000224;Parent=CHM13_chrY_T0000742;transcript_name=CHM13_chrY_T0000742;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000742:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9259898	9265633	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000225;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000225;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9259898	9265633	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000743;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_G0000225;transcript_name=CHM13_chrY_T0000743;gene_name=FAM197Y5;ID=CHM13_chrY_T0000743;Name=FAM197Y5
CHM13_chrY	CAT	exon	9259898	9260087	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000743;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_T0000743;transcript_name=CHM13_chrY_T0000743;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000743:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9260088	9263636	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000743;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_T0000743;transcript_name=CHM13_chrY_T0000743;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000743:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9263637	9263722	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000743;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_T0000743;transcript_name=CHM13_chrY_T0000743;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000743:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9263723	9265519	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000743;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_T0000743;transcript_name=CHM13_chrY_T0000743;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000743:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9265520	9265633	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000743;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_T0000743;transcript_name=CHM13_chrY_T0000743;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000743:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9260028	9265621	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000744;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_G0000225;transcript_name=CHM13_chrY_T0000744;gene_name=FAM197Y5;ID=CHM13_chrY_T0000744;Name=FAM197Y5
CHM13_chrY	CAT	exon	9260028	9260087	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000744;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_T0000744;transcript_name=CHM13_chrY_T0000744;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000744:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9260088	9263636	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000744;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_T0000744;transcript_name=CHM13_chrY_T0000744;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000744:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9263637	9263795	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000744;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_T0000744;transcript_name=CHM13_chrY_T0000744;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000744:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9263796	9265287	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000744;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_T0000744;transcript_name=CHM13_chrY_T0000744;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000744:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9265288	9265433	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000744;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_T0000744;transcript_name=CHM13_chrY_T0000744;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000744:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9265434	9265519	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000744;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_T0000744;transcript_name=CHM13_chrY_T0000744;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000744:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9265520	9265621	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000744;gene_id=CHM13_chrY_G0000225;Parent=CHM13_chrY_T0000744;transcript_name=CHM13_chrY_T0000744;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000744:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9265288	9267280	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_9;gene_id=CHM13_chrY_G0000226;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000226;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9265288	9267280	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000745;gene_id=CHM13_chrY_G0000226;Parent=CHM13_chrY_G0000226;transcript_name=CHM13_chrY_T0000745;gene_name=FAM197Y5;ID=CHM13_chrY_T0000745;Name=FAM197Y5
CHM13_chrY	CAT	exon	9265288	9265433	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000745;gene_id=CHM13_chrY_G0000226;Parent=CHM13_chrY_T0000745;transcript_name=CHM13_chrY_T0000745;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000745:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9265434	9266969	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000745;gene_id=CHM13_chrY_G0000226;Parent=CHM13_chrY_T0000745;transcript_name=CHM13_chrY_T0000745;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000745:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9266970	9267280	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000745;gene_id=CHM13_chrY_G0000226;Parent=CHM13_chrY_T0000745;transcript_name=CHM13_chrY_T0000745;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000745:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9268234	9271048	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=CHM13_chrY_G0000227;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=CHM13_chrY_G0000227;Name=TSPY4
CHM13_chrY	CAT	transcript	9268234	9271048	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_G0000227;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=CHM13_chrY_T0000746;Name=TSPY4
CHM13_chrY	CAT	exon	9268234	9268783	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000746:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9268280	9268783	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000746:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9268280	9268282	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000746;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9268784	9269390	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000746:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9269391	9269468	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000746:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9269391	9269468	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000746:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9269469	9269596	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000746:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9269597	9269708	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000746:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9269597	9269708	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000746:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9269709	9269809	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000746:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9269810	9269955	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000746:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9269810	9269955	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000746:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9269956	9270061	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000746:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9270062	9270143	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000746:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9270062	9270143	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000746:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9270144	9270837	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000746:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9270838	9271048	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000746:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9270838	9270860	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000746:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9270858	9270860	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000746;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000746;transcript_name=CHM13_chrY_T0000746;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000746;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9268234	9270927	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_G0000227;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=CHM13_chrY_T0000747;Name=TSPY4
CHM13_chrY	CAT	exon	9268234	9268366	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000747:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9268280	9268366	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000747:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9268280	9268282	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000747;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9268367	9268645	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000747:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9268646	9268783	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000747:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9268646	9268783	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000747:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9268784	9269390	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000747:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9269391	9269468	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000747:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9269391	9269468	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000747:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9269469	9269596	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000747:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9269597	9269708	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000747:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9269597	9269708	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000747:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9269709	9269809	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000747:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9269810	9269955	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000747:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9269810	9269955	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000747:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9269956	9270061	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000747:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9270062	9270143	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000747:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9270062	9270143	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000747:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9270144	9270837	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000747:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9270838	9270927	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000747:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9270838	9270860	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000747:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9270858	9270860	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000747;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000747;transcript_name=CHM13_chrY_T0000747;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000747;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9268280	9271047	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_G0000227;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=CHM13_chrY_T0000748;Name=TSPY4
CHM13_chrY	CAT	exon	9268280	9268783	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000748:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9268280	9268783	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000748:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9268280	9268282	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000748;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9268784	9269390	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000748:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9269391	9269468	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000748:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9269391	9269468	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000748:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9269469	9269596	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000748:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9269597	9269708	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000748:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9269597	9269708	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000748:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9269709	9269809	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000748:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9269810	9269955	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000748:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9269810	9269955	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000748:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9269956	9270050	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000748:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9270051	9270143	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000748:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9270051	9270113	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000748:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9270111	9270113	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000748;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9270144	9270837	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000748:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9270838	9271047	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000748;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000748;transcript_name=CHM13_chrY_T0000748;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000748:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9268280	9271054	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000749;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_G0000227;transcript_name=CHM13_chrY_T0000749;gene_name=TSPY4;ID=CHM13_chrY_T0000749;Name=TSPY4
CHM13_chrY	CAT	exon	9268280	9268783	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000749;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000749;transcript_name=CHM13_chrY_T0000749;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000749:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9268784	9269390	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000749;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000749;transcript_name=CHM13_chrY_T0000749;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000749:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9269391	9269468	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000749;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000749;transcript_name=CHM13_chrY_T0000749;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000749:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9269469	9269596	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000749;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000749;transcript_name=CHM13_chrY_T0000749;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000749:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9269597	9270143	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000749;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000749;transcript_name=CHM13_chrY_T0000749;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000749:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9270144	9270270	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000749;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000749;transcript_name=CHM13_chrY_T0000749;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000749:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9270271	9271054	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000749;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000749;transcript_name=CHM13_chrY_T0000749;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000749:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9269658	9271039	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000750;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_G0000227;transcript_name=CHM13_chrY_T0000750;gene_name=TSPY4;ID=CHM13_chrY_T0000750;Name=TSPY4
CHM13_chrY	CAT	exon	9269658	9269955	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000750;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000750;transcript_name=CHM13_chrY_T0000750;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000750:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9269956	9270050	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000750;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000750;transcript_name=CHM13_chrY_T0000750;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000750:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9270051	9270143	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000750;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000750;transcript_name=CHM13_chrY_T0000750;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000750:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9270144	9270837	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000750;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000750;transcript_name=CHM13_chrY_T0000750;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000750:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9270838	9271039	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000750;gene_id=CHM13_chrY_G0000227;Parent=CHM13_chrY_T0000750;transcript_name=CHM13_chrY_T0000750;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000750:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9280207	9285948	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000228;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000228;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9280207	9285948	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000751;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_G0000228;transcript_name=CHM13_chrY_T0000751;gene_name=FAM197Y5;ID=CHM13_chrY_T0000751;Name=FAM197Y5
CHM13_chrY	CAT	exon	9280207	9280396	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000751;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_T0000751;transcript_name=CHM13_chrY_T0000751;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000751:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9280397	9283945	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000751;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_T0000751;transcript_name=CHM13_chrY_T0000751;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000751:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9283946	9284031	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000751;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_T0000751;transcript_name=CHM13_chrY_T0000751;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000751:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9284032	9285834	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000751;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_T0000751;transcript_name=CHM13_chrY_T0000751;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000751:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9285835	9285948	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000751;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_T0000751;transcript_name=CHM13_chrY_T0000751;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000751:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9280337	9285936	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000752;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_G0000228;transcript_name=CHM13_chrY_T0000752;gene_name=FAM197Y5;ID=CHM13_chrY_T0000752;Name=FAM197Y5
CHM13_chrY	CAT	exon	9280337	9280396	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000752;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_T0000752;transcript_name=CHM13_chrY_T0000752;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000752:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9280397	9283945	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000752;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_T0000752;transcript_name=CHM13_chrY_T0000752;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000752:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9283946	9284104	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000752;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_T0000752;transcript_name=CHM13_chrY_T0000752;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000752:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9284105	9285602	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000752;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_T0000752;transcript_name=CHM13_chrY_T0000752;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000752:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9285603	9285748	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000752;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_T0000752;transcript_name=CHM13_chrY_T0000752;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000752:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9285749	9285834	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000752;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_T0000752;transcript_name=CHM13_chrY_T0000752;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000752:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9285835	9285936	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000752;gene_id=CHM13_chrY_G0000228;Parent=CHM13_chrY_T0000752;transcript_name=CHM13_chrY_T0000752;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000752:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9285603	9287595	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_2;gene_id=CHM13_chrY_G0000229;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000229;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9285603	9287595	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000753;gene_id=CHM13_chrY_G0000229;Parent=CHM13_chrY_G0000229;transcript_name=CHM13_chrY_T0000753;gene_name=FAM197Y5;ID=CHM13_chrY_T0000753;Name=FAM197Y5
CHM13_chrY	CAT	exon	9285603	9285748	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000753;gene_id=CHM13_chrY_G0000229;Parent=CHM13_chrY_T0000753;transcript_name=CHM13_chrY_T0000753;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000753:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9285749	9287284	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000753;gene_id=CHM13_chrY_G0000229;Parent=CHM13_chrY_T0000753;transcript_name=CHM13_chrY_T0000753;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000753:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9287285	9287595	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000753;gene_id=CHM13_chrY_G0000229;Parent=CHM13_chrY_T0000753;transcript_name=CHM13_chrY_T0000753;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000753:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9288549	9291345	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=CHM13_chrY_G0000230;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=CHM13_chrY_G0000230;Name=TSPY3
CHM13_chrY	CAT	transcript	9288549	9291345	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_G0000230;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=CHM13_chrY_T0000754;Name=TSPY3
CHM13_chrY	CAT	exon	9288549	9289080	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000754:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9288595	9289080	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000754:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9288595	9288597	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000754;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9289081	9289687	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000754:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9289688	9289765	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000754:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9289688	9289765	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000754:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9289766	9289893	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000754:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9289894	9290005	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000754:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9289894	9290005	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000754:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9290006	9290106	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000754:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9290107	9290252	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000754:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9290107	9290252	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000754:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9290253	9290358	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000754:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9290359	9290440	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000754:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9290359	9290440	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000754:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9290441	9291134	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000754:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9291135	9291345	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000754:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9291135	9291157	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000754:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9291155	9291157	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000754;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000754;transcript_name=CHM13_chrY_T0000754;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000754;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9288595	9291344	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_G0000230;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=CHM13_chrY_T0000755;Name=TSPY3
CHM13_chrY	CAT	exon	9288595	9289080	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000755:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9288595	9289080	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000755:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9288595	9288597	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000755;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9289081	9289687	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000755:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9289688	9289765	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000755:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9289688	9289765	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000755:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9289766	9289893	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000755:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9289894	9290005	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000755:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9289894	9290005	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000755:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9290006	9290106	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000755:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9290107	9290252	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000755:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9290107	9290252	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000755:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9290253	9290347	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000755:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9290348	9290440	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000755:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9290348	9290410	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000755:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9290408	9290410	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000755;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9290441	9291134	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000755:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9291135	9291344	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000755;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000755;transcript_name=CHM13_chrY_T0000755;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000755:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9288595	9291157	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_G0000230;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=CHM13_chrY_T0000756;Name=TSPY3
CHM13_chrY	CAT	exon	9288595	9288681	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000756:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9288595	9288681	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000756:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9288595	9288597	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000756;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9288682	9288942	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000756:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9288943	9289080	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000756:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9288943	9289080	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000756:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9289081	9289687	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000756:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9289688	9289765	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000756:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9289688	9289765	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000756:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9289766	9289893	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000756:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9289894	9290005	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000756:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9289894	9290005	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000756:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9290006	9290106	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000756:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9290107	9290252	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000756:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9290107	9290252	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000756:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9290253	9290358	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000756:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9290359	9290440	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000756:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9290359	9290440	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000756:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9290441	9291134	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000756:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9291135	9291157	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000756:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9291135	9291157	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000756:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9291155	9291157	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000756;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000756;transcript_name=CHM13_chrY_T0000756;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000756;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9288595	9291351	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000757;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_G0000230;transcript_name=CHM13_chrY_T0000757;gene_name=TSPY3;ID=CHM13_chrY_T0000757;Name=TSPY3
CHM13_chrY	CAT	exon	9288595	9289080	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000757;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000757;transcript_name=CHM13_chrY_T0000757;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000757:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9289081	9289687	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000757;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000757;transcript_name=CHM13_chrY_T0000757;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000757:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9289688	9289765	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000757;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000757;transcript_name=CHM13_chrY_T0000757;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000757:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9289766	9289893	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000757;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000757;transcript_name=CHM13_chrY_T0000757;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000757:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9289894	9290440	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000757;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000757;transcript_name=CHM13_chrY_T0000757;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000757:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9290441	9290567	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000757;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000757;transcript_name=CHM13_chrY_T0000757;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000757:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9290568	9291351	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000757;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000757;transcript_name=CHM13_chrY_T0000757;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000757:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9289955	9291336	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000758;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_G0000230;transcript_name=CHM13_chrY_T0000758;gene_name=TSPY3;ID=CHM13_chrY_T0000758;Name=TSPY3
CHM13_chrY	CAT	exon	9289955	9290252	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000758;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000758;transcript_name=CHM13_chrY_T0000758;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000758:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9290253	9290347	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000758;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000758;transcript_name=CHM13_chrY_T0000758;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000758:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9290348	9290440	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000758;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000758;transcript_name=CHM13_chrY_T0000758;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000758:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9290441	9291134	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000758;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000758;transcript_name=CHM13_chrY_T0000758;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000758:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9291135	9291336	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000758;gene_id=CHM13_chrY_G0000230;Parent=CHM13_chrY_T0000758;transcript_name=CHM13_chrY_T0000758;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000758:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9298545	9306435	.	-	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7;gene_id=CHM13_chrY_G0000231;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=CHM13_chrY_G0000231;Name=FAM197Y7
CHM13_chrY	CAT	transcript	9298545	9306435	1000	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000759;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_G0000231;transcript_name=CHM13_chrY_T0000759;gene_name=FAM197Y7;ID=CHM13_chrY_T0000759;Name=FAM197Y7
CHM13_chrY	CAT	exon	9298545	9300668	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000759;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000759;transcript_name=CHM13_chrY_T0000759;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000759:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9300669	9304219	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000759;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000759;transcript_name=CHM13_chrY_T0000759;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000759:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9304220	9304305	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000759;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000759;transcript_name=CHM13_chrY_T0000759;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000759:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9304306	9306114	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000759;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000759;transcript_name=CHM13_chrY_T0000759;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000759:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9306115	9306224	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000759;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000759;transcript_name=CHM13_chrY_T0000759;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000759:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9306225	9306420	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000759;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000759;transcript_name=CHM13_chrY_T0000759;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000759:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9306421	9306435	.	-	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000759;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000759;transcript_name=CHM13_chrY_T0000759;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000759:3;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9300609	9306216	1000	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000760;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_G0000231;transcript_name=CHM13_chrY_T0000760;gene_name=FAM197Y7;ID=CHM13_chrY_T0000760;Name=FAM197Y7
CHM13_chrY	CAT	exon	9300609	9300668	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000760;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000760;transcript_name=CHM13_chrY_T0000760;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000760:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9300669	9304219	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000760;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000760;transcript_name=CHM13_chrY_T0000760;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000760:0;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9304220	9304378	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000760;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000760;transcript_name=CHM13_chrY_T0000760;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000760:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9304379	9305882	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000760;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000760;transcript_name=CHM13_chrY_T0000760;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000760:1;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9305883	9306028	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000760;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000760;transcript_name=CHM13_chrY_T0000760;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000760:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9306029	9306114	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000760;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000760;transcript_name=CHM13_chrY_T0000760;gene_name=FAM197Y7;ID=intron:CHM13_chrY_T0000760:2;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9306115	9306216	.	-	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=CHM13_chrY_T0000760;gene_id=CHM13_chrY_G0000231;Parent=CHM13_chrY_T0000760;transcript_name=CHM13_chrY_T0000760;gene_name=FAM197Y7;ID=exon:CHM13_chrY_T0000760:3;Name=FAM197Y7;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9305883	9307875	.	-	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1;gene_id=CHM13_chrY_G0000232;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=CHM13_chrY_G0000232;Name=ENSG00000286120
CHM13_chrY	CAT	transcript	9305883	9307875	1000	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000761;gene_id=CHM13_chrY_G0000232;Parent=CHM13_chrY_G0000232;transcript_name=CHM13_chrY_T0000761;gene_name=ENSG00000286120;ID=CHM13_chrY_T0000761;Name=ENSG00000286120
CHM13_chrY	CAT	exon	9305883	9306028	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000761;gene_id=CHM13_chrY_G0000232;Parent=CHM13_chrY_T0000761;transcript_name=CHM13_chrY_T0000761;gene_name=ENSG00000286120;ID=exon:CHM13_chrY_T0000761:0;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9306029	9307564	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000761;gene_id=CHM13_chrY_G0000232;Parent=CHM13_chrY_T0000761;transcript_name=CHM13_chrY_T0000761;gene_name=ENSG00000286120;ID=intron:CHM13_chrY_T0000761:0;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9307565	9307875	.	-	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=CHM13_chrY_T0000761;gene_id=CHM13_chrY_G0000232;Parent=CHM13_chrY_T0000761;transcript_name=CHM13_chrY_T0000761;gene_name=ENSG00000286120;ID=exon:CHM13_chrY_T0000761:1;Name=ENSG00000286120;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9308829	9311625	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=CHM13_chrY_G0000233;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=CHM13_chrY_G0000233;Name=TSPY3
CHM13_chrY	CAT	transcript	9308829	9311625	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_G0000233;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=CHM13_chrY_T0000762;Name=TSPY3
CHM13_chrY	CAT	exon	9308829	9309360	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000762:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9308875	9309360	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000762:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9308875	9308877	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000762;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9309361	9309967	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000762:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9309968	9310045	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000762:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9309968	9310045	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000762:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310046	9310173	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000762:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9310174	9310285	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000762:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9310174	9310285	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000762:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310286	9310386	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000762:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9310387	9310532	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000762:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9310387	9310532	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000762:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310533	9310638	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000762:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9310639	9310720	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000762:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9310639	9310720	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000762:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310721	9311414	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000762:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9311415	9311625	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000762:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9311415	9311437	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000762:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9311435	9311437	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000762;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000762;transcript_name=CHM13_chrY_T0000762;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000762;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9308875	9311624	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_G0000233;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=CHM13_chrY_T0000763;Name=TSPY3
CHM13_chrY	CAT	exon	9308875	9309360	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000763:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9308875	9309360	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000763:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9308875	9308877	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000763;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9309361	9309967	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000763:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9309968	9310045	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000763:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9309968	9310045	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000763:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310046	9310173	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000763:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9310174	9310285	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000763:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9310174	9310285	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000763:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310286	9310386	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000763:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9310387	9310532	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000763:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9310387	9310532	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000763:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310533	9310627	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000763:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9310628	9310720	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000763:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9310628	9310690	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000763:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9310688	9310690	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000763;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310721	9311414	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000763:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9311415	9311624	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000763;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000763;transcript_name=CHM13_chrY_T0000763;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000763:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9308875	9311437	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_G0000233;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=CHM13_chrY_T0000764;Name=TSPY3
CHM13_chrY	CAT	exon	9308875	9308961	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000764:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9308875	9308961	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000764:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9308875	9308877	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000764;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9308962	9309222	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000764:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9309223	9309360	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000764:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9309223	9309360	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000764:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9309361	9309967	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000764:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9309968	9310045	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000764:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9309968	9310045	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000764:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310046	9310173	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000764:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9310174	9310285	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000764:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9310174	9310285	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000764:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310286	9310386	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000764:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9310387	9310532	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000764:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9310387	9310532	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000764:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310533	9310638	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000764:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9310639	9310720	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000764:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9310639	9310720	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000764:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310721	9311414	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000764:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9311415	9311437	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000764:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9311415	9311437	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000764:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9311435	9311437	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000764;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000764;transcript_name=CHM13_chrY_T0000764;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000764;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9308875	9311631	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000765;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_G0000233;transcript_name=CHM13_chrY_T0000765;gene_name=TSPY3;ID=CHM13_chrY_T0000765;Name=TSPY3
CHM13_chrY	CAT	exon	9308875	9309360	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000765;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000765;transcript_name=CHM13_chrY_T0000765;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000765:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9309361	9309967	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000765;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000765;transcript_name=CHM13_chrY_T0000765;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000765:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9309968	9310045	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000765;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000765;transcript_name=CHM13_chrY_T0000765;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000765:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310046	9310173	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000765;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000765;transcript_name=CHM13_chrY_T0000765;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000765:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9310174	9310720	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000765;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000765;transcript_name=CHM13_chrY_T0000765;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000765:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310721	9310847	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000765;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000765;transcript_name=CHM13_chrY_T0000765;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000765:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9310848	9311631	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000765;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000765;transcript_name=CHM13_chrY_T0000765;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000765:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9310235	9311616	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000766;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_G0000233;transcript_name=CHM13_chrY_T0000766;gene_name=TSPY3;ID=CHM13_chrY_T0000766;Name=TSPY3
CHM13_chrY	CAT	exon	9310235	9310532	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000766;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000766;transcript_name=CHM13_chrY_T0000766;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000766:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310533	9310627	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000766;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000766;transcript_name=CHM13_chrY_T0000766;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000766:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9310628	9310720	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000766;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000766;transcript_name=CHM13_chrY_T0000766;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000766:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9310721	9311414	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000766;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000766;transcript_name=CHM13_chrY_T0000766;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000766:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9311415	9311616	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000766;gene_id=CHM13_chrY_G0000233;Parent=CHM13_chrY_T0000766;transcript_name=CHM13_chrY_T0000766;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000766:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9318829	9326515	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_5;gene_id=CHM13_chrY_G0000234;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000234;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9318829	9326515	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000767;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_G0000234;transcript_name=CHM13_chrY_T0000767;gene_name=FAM197Y9;ID=CHM13_chrY_T0000767;Name=FAM197Y9
CHM13_chrY	CAT	exon	9318829	9320956	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000767;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_T0000767;transcript_name=CHM13_chrY_T0000767;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000767:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9320957	9324504	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000767;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_T0000767;transcript_name=CHM13_chrY_T0000767;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000767:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9324505	9324590	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000767;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_T0000767;transcript_name=CHM13_chrY_T0000767;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000767:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9324591	9326395	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000767;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_T0000767;transcript_name=CHM13_chrY_T0000767;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000767:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9326396	9326515	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000767;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_T0000767;transcript_name=CHM13_chrY_T0000767;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000767:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9320897	9326497	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000768;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_G0000234;transcript_name=CHM13_chrY_T0000768;gene_name=FAM197Y9;ID=CHM13_chrY_T0000768;Name=FAM197Y9
CHM13_chrY	CAT	exon	9320897	9320956	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000768;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_T0000768;transcript_name=CHM13_chrY_T0000768;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000768:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9320957	9324504	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000768;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_T0000768;transcript_name=CHM13_chrY_T0000768;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000768:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9324505	9324663	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000768;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_T0000768;transcript_name=CHM13_chrY_T0000768;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000768:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9324664	9326163	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000768;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_T0000768;transcript_name=CHM13_chrY_T0000768;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000768:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9326164	9326309	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000768;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_T0000768;transcript_name=CHM13_chrY_T0000768;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000768:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9326310	9326395	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000768;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_T0000768;transcript_name=CHM13_chrY_T0000768;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000768:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9326396	9326497	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000768;gene_id=CHM13_chrY_G0000234;Parent=CHM13_chrY_T0000768;transcript_name=CHM13_chrY_T0000768;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000768:3;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9326164	9328157	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_4;gene_id=CHM13_chrY_G0000235;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000235;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9326164	9328157	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000769;gene_id=CHM13_chrY_G0000235;Parent=CHM13_chrY_G0000235;transcript_name=CHM13_chrY_T0000769;gene_name=FAM197Y9;ID=CHM13_chrY_T0000769;Name=FAM197Y9
CHM13_chrY	CAT	exon	9326164	9326309	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000769;gene_id=CHM13_chrY_G0000235;Parent=CHM13_chrY_T0000769;transcript_name=CHM13_chrY_T0000769;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000769:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9326310	9326421	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000769;gene_id=CHM13_chrY_G0000235;Parent=CHM13_chrY_T0000769;transcript_name=CHM13_chrY_T0000769;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000769:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9326422	9326505	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000769;gene_id=CHM13_chrY_G0000235;Parent=CHM13_chrY_T0000769;transcript_name=CHM13_chrY_T0000769;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000769:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9326506	9327847	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000769;gene_id=CHM13_chrY_G0000235;Parent=CHM13_chrY_T0000769;transcript_name=CHM13_chrY_T0000769;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000769:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9327848	9328157	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000769;gene_id=CHM13_chrY_G0000235;Parent=CHM13_chrY_T0000769;transcript_name=CHM13_chrY_T0000769;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000769:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9329106	9331902	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=CHM13_chrY_G0000236;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=CHM13_chrY_G0000236;Name=TSPY3
CHM13_chrY	CAT	transcript	9329106	9331902	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_G0000236;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=CHM13_chrY_T0000770;Name=TSPY3
CHM13_chrY	CAT	exon	9329106	9329637	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000770:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9329152	9329637	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000770:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9329152	9329154	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000770;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9329638	9330244	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000770:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330245	9330322	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000770:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9330245	9330322	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000770:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330323	9330450	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000770:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330451	9330562	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000770:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9330451	9330562	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000770:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330563	9330663	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000770:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330664	9330809	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000770:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9330664	9330809	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000770:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330810	9330915	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000770:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330916	9330997	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000770:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9330916	9330997	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000770:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330998	9331691	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000770:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9331692	9331902	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000770:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9331692	9331714	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000770:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9331712	9331714	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000770;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000770;transcript_name=CHM13_chrY_T0000770;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000770;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9329152	9331901	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_G0000236;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=CHM13_chrY_T0000771;Name=TSPY3
CHM13_chrY	CAT	exon	9329152	9329637	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000771:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9329152	9329637	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000771:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9329152	9329154	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000771;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9329638	9330244	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000771:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330245	9330322	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000771:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9330245	9330322	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000771:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330323	9330450	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000771:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330451	9330562	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000771:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9330451	9330562	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000771:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330563	9330663	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000771:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330664	9330809	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000771:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9330664	9330809	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000771:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330810	9330904	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000771:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330905	9330997	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000771:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9330905	9330967	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000771:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9330965	9330967	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000771;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330998	9331691	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000771:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9331692	9331901	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000771;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000771;transcript_name=CHM13_chrY_T0000771;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000771:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9329152	9331714	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_G0000236;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=CHM13_chrY_T0000772;Name=TSPY3
CHM13_chrY	CAT	exon	9329152	9329238	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000772:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9329152	9329238	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000772:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9329152	9329154	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000772;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9329239	9329499	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000772:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9329500	9329637	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000772:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9329500	9329637	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000772:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9329638	9330244	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000772:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330245	9330322	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000772:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9330245	9330322	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000772:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330323	9330450	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000772:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330451	9330562	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000772:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9330451	9330562	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000772:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330563	9330663	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000772:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330664	9330809	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000772:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9330664	9330809	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000772:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330810	9330915	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000772:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330916	9330997	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000772:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9330916	9330997	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000772:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330998	9331691	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000772:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9331692	9331714	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000772:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9331692	9331714	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000772:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9331712	9331714	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000772;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000772;transcript_name=CHM13_chrY_T0000772;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000772;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9329152	9331908	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000773;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_G0000236;transcript_name=CHM13_chrY_T0000773;gene_name=TSPY3;ID=CHM13_chrY_T0000773;Name=TSPY3
CHM13_chrY	CAT	exon	9329152	9329637	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000773;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000773;transcript_name=CHM13_chrY_T0000773;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000773:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9329638	9330244	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000773;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000773;transcript_name=CHM13_chrY_T0000773;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000773:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330245	9330322	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000773;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000773;transcript_name=CHM13_chrY_T0000773;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000773:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330323	9330450	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000773;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000773;transcript_name=CHM13_chrY_T0000773;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000773:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330451	9330997	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000773;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000773;transcript_name=CHM13_chrY_T0000773;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000773:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330998	9331124	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000773;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000773;transcript_name=CHM13_chrY_T0000773;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000773:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9331125	9331908	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000773;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000773;transcript_name=CHM13_chrY_T0000773;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000773:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9330512	9331893	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000774;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_G0000236;transcript_name=CHM13_chrY_T0000774;gene_name=TSPY3;ID=CHM13_chrY_T0000774;Name=TSPY3
CHM13_chrY	CAT	exon	9330512	9330809	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000774;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000774;transcript_name=CHM13_chrY_T0000774;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000774:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330810	9330904	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000774;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000774;transcript_name=CHM13_chrY_T0000774;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000774:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9330905	9330997	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000774;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000774;transcript_name=CHM13_chrY_T0000774;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000774:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9330998	9331691	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000774;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000774;transcript_name=CHM13_chrY_T0000774;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000774:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9331692	9331893	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000774;gene_id=CHM13_chrY_G0000236;Parent=CHM13_chrY_T0000774;transcript_name=CHM13_chrY_T0000774;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000774:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9341045	9346791	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000237;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000237;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9341045	9346791	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000775;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_G0000237;transcript_name=CHM13_chrY_T0000775;gene_name=FAM197Y5;ID=CHM13_chrY_T0000775;Name=FAM197Y5
CHM13_chrY	CAT	exon	9341045	9341234	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000775;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_T0000775;transcript_name=CHM13_chrY_T0000775;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000775:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9341235	9344784	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000775;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_T0000775;transcript_name=CHM13_chrY_T0000775;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000775:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9344785	9344870	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000775;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_T0000775;transcript_name=CHM13_chrY_T0000775;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000775:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9344871	9346677	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000775;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_T0000775;transcript_name=CHM13_chrY_T0000775;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000775:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9346678	9346791	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000775;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_T0000775;transcript_name=CHM13_chrY_T0000775;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000775:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9341175	9346779	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000776;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_G0000237;transcript_name=CHM13_chrY_T0000776;gene_name=FAM197Y5;ID=CHM13_chrY_T0000776;Name=FAM197Y5
CHM13_chrY	CAT	exon	9341175	9341234	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000776;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_T0000776;transcript_name=CHM13_chrY_T0000776;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000776:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9341235	9344784	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000776;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_T0000776;transcript_name=CHM13_chrY_T0000776;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000776:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9344785	9344943	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000776;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_T0000776;transcript_name=CHM13_chrY_T0000776;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000776:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9344944	9346445	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000776;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_T0000776;transcript_name=CHM13_chrY_T0000776;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000776:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9346446	9346591	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000776;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_T0000776;transcript_name=CHM13_chrY_T0000776;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000776:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9346592	9346677	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000776;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_T0000776;transcript_name=CHM13_chrY_T0000776;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000776:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9346678	9346779	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000776;gene_id=CHM13_chrY_G0000237;Parent=CHM13_chrY_T0000776;transcript_name=CHM13_chrY_T0000776;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000776:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9346446	9348438	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8;gene_id=CHM13_chrY_G0000238;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000238;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9346446	9348438	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000777;gene_id=CHM13_chrY_G0000238;Parent=CHM13_chrY_G0000238;transcript_name=CHM13_chrY_T0000777;gene_name=FAM197Y5;ID=CHM13_chrY_T0000777;Name=FAM197Y5
CHM13_chrY	CAT	exon	9346446	9346591	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000777;gene_id=CHM13_chrY_G0000238;Parent=CHM13_chrY_T0000777;transcript_name=CHM13_chrY_T0000777;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000777:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9346592	9348127	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000777;gene_id=CHM13_chrY_G0000238;Parent=CHM13_chrY_T0000777;transcript_name=CHM13_chrY_T0000777;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000777:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9348128	9348438	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000777;gene_id=CHM13_chrY_G0000238;Parent=CHM13_chrY_T0000777;transcript_name=CHM13_chrY_T0000777;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000777:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9349392	9352188	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;alternative_source_transcripts=ENST00000451548.6;gene_id=CHM13_chrY_G0000239;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=CHM13_chrY_G0000239;Name=TSPY10
CHM13_chrY	CAT	transcript	9349392	9352188	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_G0000239;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=CHM13_chrY_T0000778;Name=TSPY10
CHM13_chrY	CAT	exon	9349392	9349923	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000778:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9349438	9349923	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000778:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9349438	9349440	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=start_codon:CHM13_chrY_T0000778;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9349924	9350530	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000778:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9350531	9350608	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000778:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9350531	9350608	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000778:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9350609	9350736	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000778:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9350737	9350848	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000778:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9350737	9350848	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000778:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9350849	9350949	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000778:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9350950	9351095	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000778:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9350950	9351095	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000778:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9351096	9351201	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000778:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9351202	9351283	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000778:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9351202	9351283	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000778:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9351284	9351977	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000778:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9351978	9352188	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000778:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9351978	9352000	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000778:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9351998	9352000	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000451548.6;transcript_id=CHM13_chrY_T0000778;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000778;transcript_name=CHM13_chrY_T0000778;gene_name=TSPY10;ID=stop_codon:CHM13_chrY_T0000778;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9349438	9352187	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_G0000239;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=CHM13_chrY_T0000779;Name=TSPY10
CHM13_chrY	CAT	exon	9349438	9349923	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000779:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9349438	9349923	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000779:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9349438	9349440	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=start_codon:CHM13_chrY_T0000779;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9349924	9350530	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000779:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9350531	9350608	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000779:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9350531	9350608	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000779:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9350609	9350736	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000779:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9350737	9350848	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000779:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9350737	9350848	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000779:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9350849	9350949	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000779:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9350950	9351095	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000779:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9350950	9351095	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000779:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9351096	9351190	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000779:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9351191	9351283	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000779:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9351191	9351253	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000779:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9351251	9351253	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=stop_codon:CHM13_chrY_T0000779;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9351284	9351977	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000779:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9351978	9352187	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000779;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000779;transcript_name=CHM13_chrY_T0000779;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000779:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9349438	9352194	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000780;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_G0000239;transcript_name=CHM13_chrY_T0000780;gene_name=TSPY10;ID=CHM13_chrY_T0000780;Name=TSPY10
CHM13_chrY	CAT	exon	9349438	9349923	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000780;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000780;transcript_name=CHM13_chrY_T0000780;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000780:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9349924	9350530	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000780;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000780;transcript_name=CHM13_chrY_T0000780;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000780:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9350531	9350608	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000780;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000780;transcript_name=CHM13_chrY_T0000780;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000780:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9350609	9350736	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000780;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000780;transcript_name=CHM13_chrY_T0000780;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000780:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9350737	9351283	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000780;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000780;transcript_name=CHM13_chrY_T0000780;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000780:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9351284	9351410	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000780;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000780;transcript_name=CHM13_chrY_T0000780;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000780:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9351411	9352194	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000780;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000780;transcript_name=CHM13_chrY_T0000780;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000780:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9350798	9352179	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000781;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_G0000239;transcript_name=CHM13_chrY_T0000781;gene_name=TSPY10;ID=CHM13_chrY_T0000781;Name=TSPY10
CHM13_chrY	CAT	exon	9350798	9351095	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000781;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000781;transcript_name=CHM13_chrY_T0000781;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000781:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9351096	9351201	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000781;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000781;transcript_name=CHM13_chrY_T0000781;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000781:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9351202	9351283	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000781;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000781;transcript_name=CHM13_chrY_T0000781;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000781:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9351284	9351977	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000781;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000781;transcript_name=CHM13_chrY_T0000781;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000781:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9351978	9352179	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000781;gene_id=CHM13_chrY_G0000239;Parent=CHM13_chrY_T0000781;transcript_name=CHM13_chrY_T0000781;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000781:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9361319	9367054	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;alternative_source_transcripts=ENST00000615605.1;gene_id=CHM13_chrY_G0000240;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000240;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9361319	9367054	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000615605.1;transcript_id=CHM13_chrY_T0000782;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_G0000240;transcript_name=CHM13_chrY_T0000782;gene_name=FAM197Y5;ID=CHM13_chrY_T0000782;Name=FAM197Y5
CHM13_chrY	CAT	exon	9361319	9361508	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000615605.1;transcript_id=CHM13_chrY_T0000782;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_T0000782;transcript_name=CHM13_chrY_T0000782;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000782:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9361509	9365057	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000615605.1;transcript_id=CHM13_chrY_T0000782;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_T0000782;transcript_name=CHM13_chrY_T0000782;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000782:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9365058	9365143	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000615605.1;transcript_id=CHM13_chrY_T0000782;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_T0000782;transcript_name=CHM13_chrY_T0000782;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000782:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9365144	9366940	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000615605.1;transcript_id=CHM13_chrY_T0000782;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_T0000782;transcript_name=CHM13_chrY_T0000782;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000782:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9366941	9367054	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000615605.1;transcript_id=CHM13_chrY_T0000782;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_T0000782;transcript_name=CHM13_chrY_T0000782;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000782:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9361449	9367042	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=CHM13_chrY_T0000783;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_G0000240;transcript_name=CHM13_chrY_T0000783;gene_name=FAM197Y5;ID=CHM13_chrY_T0000783;Name=FAM197Y5
CHM13_chrY	CAT	exon	9361449	9361508	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=CHM13_chrY_T0000783;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_T0000783;transcript_name=CHM13_chrY_T0000783;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000783:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9361509	9365057	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=CHM13_chrY_T0000783;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_T0000783;transcript_name=CHM13_chrY_T0000783;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000783:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9365058	9365216	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=CHM13_chrY_T0000783;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_T0000783;transcript_name=CHM13_chrY_T0000783;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000783:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9365217	9366708	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=CHM13_chrY_T0000783;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_T0000783;transcript_name=CHM13_chrY_T0000783;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000783:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9366709	9366854	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=CHM13_chrY_T0000783;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_T0000783;transcript_name=CHM13_chrY_T0000783;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000783:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9366855	9366940	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=CHM13_chrY_T0000783;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_T0000783;transcript_name=CHM13_chrY_T0000783;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000783:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9366941	9367042	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=ENST00000619815.4;transcript_id=CHM13_chrY_T0000783;gene_id=CHM13_chrY_G0000240;Parent=CHM13_chrY_T0000783;transcript_name=CHM13_chrY_T0000783;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000783:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9366709	9368701	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_17;gene_id=CHM13_chrY_G0000241;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000241;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9366709	9368701	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_17;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_17;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000784;gene_id=CHM13_chrY_G0000241;Parent=CHM13_chrY_G0000241;transcript_name=CHM13_chrY_T0000784;gene_name=FAM197Y5;ID=CHM13_chrY_T0000784;Name=FAM197Y5
CHM13_chrY	CAT	exon	9366709	9366854	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_17;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_17;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000784;gene_id=CHM13_chrY_G0000241;Parent=CHM13_chrY_T0000784;transcript_name=CHM13_chrY_T0000784;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000784:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9366855	9368390	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_17;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_17;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000784;gene_id=CHM13_chrY_G0000241;Parent=CHM13_chrY_T0000784;transcript_name=CHM13_chrY_T0000784;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000784:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9368391	9368701	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_17;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_17;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000784;gene_id=CHM13_chrY_G0000241;Parent=CHM13_chrY_T0000784;transcript_name=CHM13_chrY_T0000784;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000784:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9369655	9372469	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=CHM13_chrY_G0000242;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=CHM13_chrY_G0000242;Name=TSPY4
CHM13_chrY	CAT	transcript	9369655	9372348	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_G0000242;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=CHM13_chrY_T0000785;Name=TSPY4
CHM13_chrY	CAT	exon	9369655	9369787	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000785:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9369701	9369787	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000785:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9369701	9369703	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000785;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9369788	9370066	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000785:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9370067	9370204	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000785:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9370067	9370204	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000785:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9370205	9370811	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000785:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9370812	9370889	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000785:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9370812	9370889	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000785:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9370890	9371017	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000785:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9371018	9371129	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000785:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9371018	9371129	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000785:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9371130	9371230	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000785:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9371231	9371376	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000785:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9371231	9371376	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000785:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9371377	9371482	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000785:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9371483	9371564	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000785:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9371483	9371564	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000785:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9371565	9372258	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000785:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9372259	9372348	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000785:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9372259	9372281	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000785:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9372279	9372281	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000785;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000785;transcript_name=CHM13_chrY_T0000785;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000785;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9369655	9372469	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_G0000242;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=CHM13_chrY_T0000786;Name=TSPY4
CHM13_chrY	CAT	exon	9369655	9370204	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000786:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9369701	9370204	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000786:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9369701	9369703	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000786;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9370205	9370811	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000786:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9370812	9370889	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000786:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9370812	9370889	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000786:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9370890	9371017	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000786:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9371018	9371129	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000786:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9371018	9371129	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000786:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9371130	9371230	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000786:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9371231	9371376	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000786:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9371231	9371376	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000786:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9371377	9371482	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000786:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9371483	9371564	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000786:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9371483	9371564	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000786:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9371565	9372258	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000786:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9372259	9372469	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000786:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9372259	9372281	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000786:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9372279	9372281	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000786;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000786;transcript_name=CHM13_chrY_T0000786;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000786;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9369701	9372468	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_G0000242;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=CHM13_chrY_T0000787;Name=TSPY4
CHM13_chrY	CAT	exon	9369701	9370204	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000787:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9369701	9370204	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000787:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9369701	9369703	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000787;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9370205	9370811	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000787:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9370812	9370889	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000787:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9370812	9370889	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000787:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9370890	9371017	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000787:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9371018	9371129	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000787:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9371018	9371129	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000787:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9371130	9371230	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000787:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9371231	9371376	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000787:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9371231	9371376	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000787:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9371377	9371471	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000787:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9371472	9371564	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000787:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9371472	9371534	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000787:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9371532	9371534	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000787;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9371565	9372258	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000787:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9372259	9372468	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000787;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000787;transcript_name=CHM13_chrY_T0000787;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000787:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9369701	9372475	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000788;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_G0000242;transcript_name=CHM13_chrY_T0000788;gene_name=TSPY4;ID=CHM13_chrY_T0000788;Name=TSPY4
CHM13_chrY	CAT	exon	9369701	9370204	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000788;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000788;transcript_name=CHM13_chrY_T0000788;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000788:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9370205	9370811	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000788;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000788;transcript_name=CHM13_chrY_T0000788;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000788:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9370812	9370889	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000788;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000788;transcript_name=CHM13_chrY_T0000788;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000788:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9370890	9371017	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000788;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000788;transcript_name=CHM13_chrY_T0000788;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000788:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9371018	9371564	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000788;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000788;transcript_name=CHM13_chrY_T0000788;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000788:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9371565	9371691	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000788;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000788;transcript_name=CHM13_chrY_T0000788;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000788:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9371692	9372475	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000788;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000788;transcript_name=CHM13_chrY_T0000788;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000788:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9371079	9372460	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000789;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_G0000242;transcript_name=CHM13_chrY_T0000789;gene_name=TSPY4;ID=CHM13_chrY_T0000789;Name=TSPY4
CHM13_chrY	CAT	exon	9371079	9371376	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000789;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000789;transcript_name=CHM13_chrY_T0000789;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000789:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9371377	9371471	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000789;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000789;transcript_name=CHM13_chrY_T0000789;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000789:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9371472	9371564	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000789;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000789;transcript_name=CHM13_chrY_T0000789;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000789:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9371565	9372258	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000789;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000789;transcript_name=CHM13_chrY_T0000789;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000789:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9372259	9372460	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000789;gene_id=CHM13_chrY_G0000242;Parent=CHM13_chrY_T0000789;transcript_name=CHM13_chrY_T0000789;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000789:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9381630	9387378	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000243;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000243;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9381630	9387378	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000790;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_G0000243;transcript_name=CHM13_chrY_T0000790;gene_name=FAM197Y5;ID=CHM13_chrY_T0000790;Name=FAM197Y5
CHM13_chrY	CAT	exon	9381630	9381819	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000790;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_T0000790;transcript_name=CHM13_chrY_T0000790;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000790:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9381820	9385373	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000790;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_T0000790;transcript_name=CHM13_chrY_T0000790;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000790:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9385374	9385459	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000790;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_T0000790;transcript_name=CHM13_chrY_T0000790;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000790:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9385460	9387264	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000790;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_T0000790;transcript_name=CHM13_chrY_T0000790;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000790:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9387265	9387378	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000790;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_T0000790;transcript_name=CHM13_chrY_T0000790;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000790:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9381760	9387366	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000791;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_G0000243;transcript_name=CHM13_chrY_T0000791;gene_name=FAM197Y5;ID=CHM13_chrY_T0000791;Name=FAM197Y5
CHM13_chrY	CAT	exon	9381760	9381819	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000791;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_T0000791;transcript_name=CHM13_chrY_T0000791;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000791:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9381820	9385373	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000791;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_T0000791;transcript_name=CHM13_chrY_T0000791;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000791:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9385374	9385532	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000791;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_T0000791;transcript_name=CHM13_chrY_T0000791;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000791:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9385533	9387032	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000791;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_T0000791;transcript_name=CHM13_chrY_T0000791;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000791:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9387033	9387178	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000791;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_T0000791;transcript_name=CHM13_chrY_T0000791;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000791:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9387179	9387264	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000791;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_T0000791;transcript_name=CHM13_chrY_T0000791;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000791:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9387265	9387366	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000791;gene_id=CHM13_chrY_G0000243;Parent=CHM13_chrY_T0000791;transcript_name=CHM13_chrY_T0000791;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000791:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9387033	9389025	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_3;gene_id=CHM13_chrY_G0000244;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000244;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9387033	9389025	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000792;gene_id=CHM13_chrY_G0000244;Parent=CHM13_chrY_G0000244;transcript_name=CHM13_chrY_T0000792;gene_name=FAM197Y5;ID=CHM13_chrY_T0000792;Name=FAM197Y5
CHM13_chrY	CAT	exon	9387033	9387178	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000792;gene_id=CHM13_chrY_G0000244;Parent=CHM13_chrY_T0000792;transcript_name=CHM13_chrY_T0000792;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000792:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9387179	9388714	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000792;gene_id=CHM13_chrY_G0000244;Parent=CHM13_chrY_T0000792;transcript_name=CHM13_chrY_T0000792;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000792:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9388715	9389025	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000792;gene_id=CHM13_chrY_G0000244;Parent=CHM13_chrY_T0000792;transcript_name=CHM13_chrY_T0000792;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000792:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9389982	9392787	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1_3;gene_id=CHM13_chrY_G0000245;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=CHM13_chrY_G0000245;Name=ENSG00000301844
CHM13_chrY	CAT	transcript	9389982	9392787	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000793;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_G0000245;transcript_name=CHM13_chrY_T0000793;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000793;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9389982	9390510	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000793;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000793;transcript_name=CHM13_chrY_T0000793;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000793:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9390511	9391117	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000793;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000793;transcript_name=CHM13_chrY_T0000793;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000793:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391118	9391195	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000793;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000793;transcript_name=CHM13_chrY_T0000793;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000793:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391196	9391323	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000793;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000793;transcript_name=CHM13_chrY_T0000793;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000793:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391324	9391435	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000793;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000793;transcript_name=CHM13_chrY_T0000793;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000793:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391436	9391536	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000793;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000793;transcript_name=CHM13_chrY_T0000793;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000793:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391537	9391682	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000793;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000793;transcript_name=CHM13_chrY_T0000793;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000793:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391683	9391788	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000793;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000793;transcript_name=CHM13_chrY_T0000793;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000793:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391789	9391870	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000793;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000793;transcript_name=CHM13_chrY_T0000793;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000793:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391871	9392564	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000793;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000793;transcript_name=CHM13_chrY_T0000793;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000793:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9392565	9392787	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000793;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000793;transcript_name=CHM13_chrY_T0000793;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000793:5;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9389991	9392782	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000794;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_G0000245;transcript_name=CHM13_chrY_T0000794;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000794;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9389991	9390510	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000794;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000794;transcript_name=CHM13_chrY_T0000794;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000794:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9390511	9391117	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000794;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000794;transcript_name=CHM13_chrY_T0000794;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000794:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391118	9391195	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000794;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000794;transcript_name=CHM13_chrY_T0000794;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000794:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391196	9391323	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000794;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000794;transcript_name=CHM13_chrY_T0000794;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000794:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391324	9391435	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000794;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000794;transcript_name=CHM13_chrY_T0000794;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000794:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391436	9391543	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000794;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000794;transcript_name=CHM13_chrY_T0000794;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000794:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391544	9391682	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000794;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000794;transcript_name=CHM13_chrY_T0000794;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000794:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391683	9391788	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000794;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000794;transcript_name=CHM13_chrY_T0000794;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000794:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391789	9391870	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000794;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000794;transcript_name=CHM13_chrY_T0000794;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000794:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391871	9392564	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000794;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000794;transcript_name=CHM13_chrY_T0000794;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000794:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9392565	9392782	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000794;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000794;transcript_name=CHM13_chrY_T0000794;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000794:5;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9390013	9392777	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000795;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_G0000245;transcript_name=CHM13_chrY_T0000795;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000795;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9390013	9390510	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000795;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000795;transcript_name=CHM13_chrY_T0000795;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000795:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9390511	9391117	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000795;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000795;transcript_name=CHM13_chrY_T0000795;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000795:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391118	9391195	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000795;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000795;transcript_name=CHM13_chrY_T0000795;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000795:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391196	9391323	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000795;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000795;transcript_name=CHM13_chrY_T0000795;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000795:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391324	9391435	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000795;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000795;transcript_name=CHM13_chrY_T0000795;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000795:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391436	9391536	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000795;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000795;transcript_name=CHM13_chrY_T0000795;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000795:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391537	9391870	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000795;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000795;transcript_name=CHM13_chrY_T0000795;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000795:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391871	9392564	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000795;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000795;transcript_name=CHM13_chrY_T0000795;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000795:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9392565	9392777	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000795;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000795;transcript_name=CHM13_chrY_T0000795;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000795:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9390023	9392782	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000796;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_G0000245;transcript_name=CHM13_chrY_T0000796;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000796;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9390023	9390510	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000796;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000796;transcript_name=CHM13_chrY_T0000796;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000796:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9390511	9391117	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000796;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000796;transcript_name=CHM13_chrY_T0000796;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000796:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391118	9391195	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000796;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000796;transcript_name=CHM13_chrY_T0000796;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000796:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391196	9391323	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000796;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000796;transcript_name=CHM13_chrY_T0000796;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000796:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391324	9391682	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000796;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000796;transcript_name=CHM13_chrY_T0000796;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000796:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391683	9391788	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000796;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000796;transcript_name=CHM13_chrY_T0000796;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000796:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391789	9391870	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000796;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000796;transcript_name=CHM13_chrY_T0000796;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000796:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391871	9392564	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000796;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000796;transcript_name=CHM13_chrY_T0000796;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000796:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9392565	9392782	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000796;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000796;transcript_name=CHM13_chrY_T0000796;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000796:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9390025	9392775	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000797;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_G0000245;transcript_name=CHM13_chrY_T0000797;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000797;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9390025	9390510	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000797;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000797;transcript_name=CHM13_chrY_T0000797;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000797:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9390511	9391117	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000797;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000797;transcript_name=CHM13_chrY_T0000797;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000797:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391118	9391195	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000797;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000797;transcript_name=CHM13_chrY_T0000797;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000797:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391196	9391323	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000797;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000797;transcript_name=CHM13_chrY_T0000797;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000797:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391324	9391870	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000797;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000797;transcript_name=CHM13_chrY_T0000797;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000797:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391871	9392564	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000797;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000797;transcript_name=CHM13_chrY_T0000797;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000797:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9392565	9392775	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000797;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000797;transcript_name=CHM13_chrY_T0000797;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000797:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9390025	9392782	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000798;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_G0000245;transcript_name=CHM13_chrY_T0000798;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000798;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9390025	9390510	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000798;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000798;transcript_name=CHM13_chrY_T0000798;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000798:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9390511	9391117	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000798;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000798;transcript_name=CHM13_chrY_T0000798;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000798:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391118	9391195	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000798;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000798;transcript_name=CHM13_chrY_T0000798;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000798:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391196	9391323	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000798;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000798;transcript_name=CHM13_chrY_T0000798;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000798:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391324	9391435	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000798;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000798;transcript_name=CHM13_chrY_T0000798;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000798:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391436	9391536	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000798;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000798;transcript_name=CHM13_chrY_T0000798;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000798:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391537	9391682	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000798;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000798;transcript_name=CHM13_chrY_T0000798;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000798:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391683	9391777	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000798;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000798;transcript_name=CHM13_chrY_T0000798;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000798:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391778	9391870	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000798;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000798;transcript_name=CHM13_chrY_T0000798;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000798:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391871	9392564	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000798;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000798;transcript_name=CHM13_chrY_T0000798;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000798:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9392565	9392782	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000798;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000798;transcript_name=CHM13_chrY_T0000798;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000798:5;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9390045	9392782	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000800;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_G0000245;transcript_name=CHM13_chrY_T0000800;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000800;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9390045	9390510	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000800;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000800;transcript_name=CHM13_chrY_T0000800;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000800:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9390511	9391117	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000800;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000800;transcript_name=CHM13_chrY_T0000800;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000800:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391118	9391195	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000800;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000800;transcript_name=CHM13_chrY_T0000800;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000800:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391196	9391323	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000800;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000800;transcript_name=CHM13_chrY_T0000800;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000800:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391324	9391682	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000800;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000800;transcript_name=CHM13_chrY_T0000800;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000800:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391683	9391777	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000800;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000800;transcript_name=CHM13_chrY_T0000800;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000800:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391778	9391870	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000800;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000800;transcript_name=CHM13_chrY_T0000800;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000800:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391871	9392564	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000800;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000800;transcript_name=CHM13_chrY_T0000800;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000800:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9392565	9392782	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000800;gene_id=CHM13_chrY_G0000245;Parent=CHM13_chrY_T0000800;transcript_name=CHM13_chrY_T0000800;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000800:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9390025	9392775	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8_3;gene_id=CHM13_chrY_G0000246;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=CHM13_chrY_G0000246;Name=TSPY7P
CHM13_chrY	CAT	transcript	9390025	9392775	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000799;gene_id=CHM13_chrY_G0000246;Parent=CHM13_chrY_G0000246;transcript_name=CHM13_chrY_T0000799;gene_name=TSPY7P;ID=CHM13_chrY_T0000799;Name=TSPY7P
CHM13_chrY	CAT	exon	9390025	9390510	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000799;gene_id=CHM13_chrY_G0000246;Parent=CHM13_chrY_T0000799;transcript_name=CHM13_chrY_T0000799;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000799:0;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9390511	9391117	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000799;gene_id=CHM13_chrY_G0000246;Parent=CHM13_chrY_T0000799;transcript_name=CHM13_chrY_T0000799;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000799:0;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391118	9391195	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000799;gene_id=CHM13_chrY_G0000246;Parent=CHM13_chrY_T0000799;transcript_name=CHM13_chrY_T0000799;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000799:1;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391196	9391323	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000799;gene_id=CHM13_chrY_G0000246;Parent=CHM13_chrY_T0000799;transcript_name=CHM13_chrY_T0000799;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000799:1;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391324	9391435	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000799;gene_id=CHM13_chrY_G0000246;Parent=CHM13_chrY_T0000799;transcript_name=CHM13_chrY_T0000799;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000799:2;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391436	9391536	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000799;gene_id=CHM13_chrY_G0000246;Parent=CHM13_chrY_T0000799;transcript_name=CHM13_chrY_T0000799;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000799:2;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391537	9391682	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000799;gene_id=CHM13_chrY_G0000246;Parent=CHM13_chrY_T0000799;transcript_name=CHM13_chrY_T0000799;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000799:3;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391683	9391788	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000799;gene_id=CHM13_chrY_G0000246;Parent=CHM13_chrY_T0000799;transcript_name=CHM13_chrY_T0000799;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000799:3;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9391789	9391870	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000799;gene_id=CHM13_chrY_G0000246;Parent=CHM13_chrY_T0000799;transcript_name=CHM13_chrY_T0000799;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000799:4;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9391871	9392564	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000799;gene_id=CHM13_chrY_G0000246;Parent=CHM13_chrY_T0000799;transcript_name=CHM13_chrY_T0000799;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000799:4;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9392565	9392775	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000799;gene_id=CHM13_chrY_G0000246;Parent=CHM13_chrY_T0000799;transcript_name=CHM13_chrY_T0000799;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000799:5;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9399987	9407676	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_1;gene_id=CHM13_chrY_G0000247;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000247;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9399987	9407676	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000801;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_G0000247;transcript_name=CHM13_chrY_T0000801;gene_name=FAM197Y9;ID=CHM13_chrY_T0000801;Name=FAM197Y9
CHM13_chrY	CAT	exon	9399987	9402114	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000801;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_T0000801;transcript_name=CHM13_chrY_T0000801;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000801:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9402115	9405665	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000801;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_T0000801;transcript_name=CHM13_chrY_T0000801;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000801:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9405666	9405751	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000801;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_T0000801;transcript_name=CHM13_chrY_T0000801;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000801:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9405752	9407556	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000801;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_T0000801;transcript_name=CHM13_chrY_T0000801;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000801:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9407557	9407676	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000801;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_T0000801;transcript_name=CHM13_chrY_T0000801;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000801:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9402055	9407658	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000802;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_G0000247;transcript_name=CHM13_chrY_T0000802;gene_name=FAM197Y9;ID=CHM13_chrY_T0000802;Name=FAM197Y9
CHM13_chrY	CAT	exon	9402055	9402114	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000802;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_T0000802;transcript_name=CHM13_chrY_T0000802;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000802:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9402115	9405665	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000802;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_T0000802;transcript_name=CHM13_chrY_T0000802;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000802:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9405666	9405824	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000802;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_T0000802;transcript_name=CHM13_chrY_T0000802;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000802:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9405825	9407324	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000802;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_T0000802;transcript_name=CHM13_chrY_T0000802;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000802:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9407325	9407470	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000802;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_T0000802;transcript_name=CHM13_chrY_T0000802;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000802:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9407471	9407556	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000802;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_T0000802;transcript_name=CHM13_chrY_T0000802;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000802:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9407557	9407658	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000802;gene_id=CHM13_chrY_G0000247;Parent=CHM13_chrY_T0000802;transcript_name=CHM13_chrY_T0000802;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000802:3;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9407325	9409318	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_6;gene_id=CHM13_chrY_G0000248;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000248;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9407325	9409318	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000803;gene_id=CHM13_chrY_G0000248;Parent=CHM13_chrY_G0000248;transcript_name=CHM13_chrY_T0000803;gene_name=FAM197Y9;ID=CHM13_chrY_T0000803;Name=FAM197Y9
CHM13_chrY	CAT	exon	9407325	9407470	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000803;gene_id=CHM13_chrY_G0000248;Parent=CHM13_chrY_T0000803;transcript_name=CHM13_chrY_T0000803;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000803:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9407471	9407582	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000803;gene_id=CHM13_chrY_G0000248;Parent=CHM13_chrY_T0000803;transcript_name=CHM13_chrY_T0000803;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000803:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9407583	9407666	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000803;gene_id=CHM13_chrY_G0000248;Parent=CHM13_chrY_T0000803;transcript_name=CHM13_chrY_T0000803;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000803:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9407667	9409008	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000803;gene_id=CHM13_chrY_G0000248;Parent=CHM13_chrY_T0000803;transcript_name=CHM13_chrY_T0000803;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000803:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9409009	9409318	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000803;gene_id=CHM13_chrY_G0000248;Parent=CHM13_chrY_T0000803;transcript_name=CHM13_chrY_T0000803;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000803:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9410274	9413079	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1;gene_id=CHM13_chrY_G0000249;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=CHM13_chrY_G0000249;Name=ENSG00000301844
CHM13_chrY	CAT	transcript	9410274	9413079	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000804;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_G0000249;transcript_name=CHM13_chrY_T0000804;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000804;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9410274	9410802	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000804;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000804;transcript_name=CHM13_chrY_T0000804;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000804:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9410803	9411409	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000804;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000804;transcript_name=CHM13_chrY_T0000804;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000804:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411410	9411487	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000804;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000804;transcript_name=CHM13_chrY_T0000804;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000804:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411488	9411615	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000804;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000804;transcript_name=CHM13_chrY_T0000804;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000804:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411616	9411727	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000804;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000804;transcript_name=CHM13_chrY_T0000804;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000804:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411728	9411828	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000804;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000804;transcript_name=CHM13_chrY_T0000804;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000804:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411829	9411974	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000804;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000804;transcript_name=CHM13_chrY_T0000804;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000804:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411975	9412080	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000804;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000804;transcript_name=CHM13_chrY_T0000804;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000804:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412081	9412162	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000804;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000804;transcript_name=CHM13_chrY_T0000804;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000804:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9412163	9412856	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000804;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000804;transcript_name=CHM13_chrY_T0000804;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000804:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412857	9413079	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000804;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000804;transcript_name=CHM13_chrY_T0000804;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000804:5;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9410283	9413074	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000805;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_G0000249;transcript_name=CHM13_chrY_T0000805;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000805;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9410283	9410802	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000805;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000805;transcript_name=CHM13_chrY_T0000805;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000805:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9410803	9411409	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000805;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000805;transcript_name=CHM13_chrY_T0000805;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000805:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411410	9411487	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000805;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000805;transcript_name=CHM13_chrY_T0000805;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000805:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411488	9411615	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000805;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000805;transcript_name=CHM13_chrY_T0000805;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000805:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411616	9411727	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000805;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000805;transcript_name=CHM13_chrY_T0000805;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000805:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411728	9411835	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000805;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000805;transcript_name=CHM13_chrY_T0000805;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000805:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411836	9411974	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000805;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000805;transcript_name=CHM13_chrY_T0000805;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000805:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411975	9412080	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000805;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000805;transcript_name=CHM13_chrY_T0000805;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000805:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412081	9412162	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000805;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000805;transcript_name=CHM13_chrY_T0000805;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000805:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9412163	9412856	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000805;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000805;transcript_name=CHM13_chrY_T0000805;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000805:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412857	9413074	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000805;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000805;transcript_name=CHM13_chrY_T0000805;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000805:5;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9410305	9413069	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000806;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_G0000249;transcript_name=CHM13_chrY_T0000806;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000806;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9410305	9410802	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000806;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000806;transcript_name=CHM13_chrY_T0000806;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000806:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9410803	9411409	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000806;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000806;transcript_name=CHM13_chrY_T0000806;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000806:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411410	9411487	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000806;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000806;transcript_name=CHM13_chrY_T0000806;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000806:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411488	9411615	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000806;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000806;transcript_name=CHM13_chrY_T0000806;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000806:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411616	9411727	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000806;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000806;transcript_name=CHM13_chrY_T0000806;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000806:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411728	9411828	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000806;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000806;transcript_name=CHM13_chrY_T0000806;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000806:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411829	9412162	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000806;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000806;transcript_name=CHM13_chrY_T0000806;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000806:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9412163	9412856	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000806;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000806;transcript_name=CHM13_chrY_T0000806;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000806:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412857	9413069	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000806;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000806;transcript_name=CHM13_chrY_T0000806;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000806:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9410315	9413074	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000807;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_G0000249;transcript_name=CHM13_chrY_T0000807;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000807;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9410315	9410802	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000807;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000807;transcript_name=CHM13_chrY_T0000807;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000807:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9410803	9411409	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000807;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000807;transcript_name=CHM13_chrY_T0000807;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000807:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411410	9411487	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000807;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000807;transcript_name=CHM13_chrY_T0000807;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000807:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411488	9411615	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000807;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000807;transcript_name=CHM13_chrY_T0000807;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000807:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411616	9411974	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000807;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000807;transcript_name=CHM13_chrY_T0000807;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000807:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411975	9412080	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000807;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000807;transcript_name=CHM13_chrY_T0000807;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000807:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412081	9412162	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000807;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000807;transcript_name=CHM13_chrY_T0000807;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000807:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9412163	9412856	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000807;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000807;transcript_name=CHM13_chrY_T0000807;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000807:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412857	9413074	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000807;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000807;transcript_name=CHM13_chrY_T0000807;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000807:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9410317	9413074	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000808;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_G0000249;transcript_name=CHM13_chrY_T0000808;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000808;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9410317	9410802	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000808;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000808;transcript_name=CHM13_chrY_T0000808;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000808:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9410803	9411409	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000808;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000808;transcript_name=CHM13_chrY_T0000808;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000808:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411410	9411487	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000808;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000808;transcript_name=CHM13_chrY_T0000808;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000808:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411488	9411615	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000808;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000808;transcript_name=CHM13_chrY_T0000808;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000808:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411616	9411727	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000808;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000808;transcript_name=CHM13_chrY_T0000808;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000808:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411728	9411828	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000808;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000808;transcript_name=CHM13_chrY_T0000808;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000808:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411829	9411974	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000808;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000808;transcript_name=CHM13_chrY_T0000808;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000808:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411975	9412069	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000808;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000808;transcript_name=CHM13_chrY_T0000808;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000808:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412070	9412162	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000808;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000808;transcript_name=CHM13_chrY_T0000808;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000808:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9412163	9412856	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000808;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000808;transcript_name=CHM13_chrY_T0000808;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000808:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412857	9413074	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000808;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000808;transcript_name=CHM13_chrY_T0000808;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000808:5;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9410317	9413067	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000809;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_G0000249;transcript_name=CHM13_chrY_T0000809;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000809;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9410317	9410802	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000809;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000809;transcript_name=CHM13_chrY_T0000809;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000809:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9410803	9411409	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000809;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000809;transcript_name=CHM13_chrY_T0000809;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000809:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411410	9411487	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000809;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000809;transcript_name=CHM13_chrY_T0000809;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000809:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411488	9411615	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000809;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000809;transcript_name=CHM13_chrY_T0000809;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000809:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411616	9412162	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000809;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000809;transcript_name=CHM13_chrY_T0000809;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000809:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9412163	9412856	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000809;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000809;transcript_name=CHM13_chrY_T0000809;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000809:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412857	9413067	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000809;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000809;transcript_name=CHM13_chrY_T0000809;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000809:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9410337	9413074	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000811;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_G0000249;transcript_name=CHM13_chrY_T0000811;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000811;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9410337	9410802	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000811;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000811;transcript_name=CHM13_chrY_T0000811;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000811:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9410803	9411409	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000811;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000811;transcript_name=CHM13_chrY_T0000811;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000811:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411410	9411487	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000811;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000811;transcript_name=CHM13_chrY_T0000811;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000811:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411488	9411615	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000811;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000811;transcript_name=CHM13_chrY_T0000811;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000811:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411616	9411974	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000811;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000811;transcript_name=CHM13_chrY_T0000811;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000811:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411975	9412069	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000811;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000811;transcript_name=CHM13_chrY_T0000811;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000811:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412070	9412162	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000811;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000811;transcript_name=CHM13_chrY_T0000811;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000811:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9412163	9412856	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000811;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000811;transcript_name=CHM13_chrY_T0000811;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000811:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412857	9413074	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000811;gene_id=CHM13_chrY_G0000249;Parent=CHM13_chrY_T0000811;transcript_name=CHM13_chrY_T0000811;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000811:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9410317	9413067	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8;gene_id=CHM13_chrY_G0000250;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=CHM13_chrY_G0000250;Name=TSPY7P
CHM13_chrY	CAT	transcript	9410317	9413067	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000810;gene_id=CHM13_chrY_G0000250;Parent=CHM13_chrY_G0000250;transcript_name=CHM13_chrY_T0000810;gene_name=TSPY7P;ID=CHM13_chrY_T0000810;Name=TSPY7P
CHM13_chrY	CAT	exon	9410317	9410802	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000810;gene_id=CHM13_chrY_G0000250;Parent=CHM13_chrY_T0000810;transcript_name=CHM13_chrY_T0000810;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000810:0;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9410803	9411409	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000810;gene_id=CHM13_chrY_G0000250;Parent=CHM13_chrY_T0000810;transcript_name=CHM13_chrY_T0000810;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000810:0;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411410	9411487	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000810;gene_id=CHM13_chrY_G0000250;Parent=CHM13_chrY_T0000810;transcript_name=CHM13_chrY_T0000810;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000810:1;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411488	9411615	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000810;gene_id=CHM13_chrY_G0000250;Parent=CHM13_chrY_T0000810;transcript_name=CHM13_chrY_T0000810;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000810:1;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411616	9411727	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000810;gene_id=CHM13_chrY_G0000250;Parent=CHM13_chrY_T0000810;transcript_name=CHM13_chrY_T0000810;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000810:2;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411728	9411828	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000810;gene_id=CHM13_chrY_G0000250;Parent=CHM13_chrY_T0000810;transcript_name=CHM13_chrY_T0000810;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000810:2;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9411829	9411974	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000810;gene_id=CHM13_chrY_G0000250;Parent=CHM13_chrY_T0000810;transcript_name=CHM13_chrY_T0000810;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000810:3;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9411975	9412080	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000810;gene_id=CHM13_chrY_G0000250;Parent=CHM13_chrY_T0000810;transcript_name=CHM13_chrY_T0000810;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000810:3;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412081	9412162	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000810;gene_id=CHM13_chrY_G0000250;Parent=CHM13_chrY_T0000810;transcript_name=CHM13_chrY_T0000810;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000810:4;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9412163	9412856	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000810;gene_id=CHM13_chrY_G0000250;Parent=CHM13_chrY_T0000810;transcript_name=CHM13_chrY_T0000810;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000810:4;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9412857	9413067	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000810;gene_id=CHM13_chrY_G0000250;Parent=CHM13_chrY_T0000810;transcript_name=CHM13_chrY_T0000810;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000810:5;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9420269	9428167	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000293362.1;gene_id=CHM13_chrY_G0000251;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=CHM13_chrY_G0000251;Name=FAM197Y8
CHM13_chrY	CAT	transcript	9420269	9428167	1000	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000812;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_G0000251;transcript_name=CHM13_chrY_T0000812;gene_name=FAM197Y8;ID=CHM13_chrY_T0000812;Name=FAM197Y8
CHM13_chrY	CAT	exon	9420269	9422396	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000812;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000812;transcript_name=CHM13_chrY_T0000812;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000812:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9422397	9425947	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000812;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000812;transcript_name=CHM13_chrY_T0000812;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000812:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9425948	9426033	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000812;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000812;transcript_name=CHM13_chrY_T0000812;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000812:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9426034	9427846	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000812;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000812;transcript_name=CHM13_chrY_T0000812;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000812:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9427847	9427956	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000812;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000812;transcript_name=CHM13_chrY_T0000812;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000812:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9427957	9428152	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000812;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000812;transcript_name=CHM13_chrY_T0000812;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000812:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9428153	9428167	.	-	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000812;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000812;transcript_name=CHM13_chrY_T0000812;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000812:3;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9422336	9427948	1000	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000813;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_G0000251;transcript_name=CHM13_chrY_T0000813;gene_name=FAM197Y8;ID=CHM13_chrY_T0000813;Name=FAM197Y8
CHM13_chrY	CAT	exon	9422336	9422396	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000813;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000813;transcript_name=CHM13_chrY_T0000813;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000813:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9422397	9425947	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000813;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000813;transcript_name=CHM13_chrY_T0000813;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000813:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9425948	9426106	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000813;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000813;transcript_name=CHM13_chrY_T0000813;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000813:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9426107	9427614	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000813;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000813;transcript_name=CHM13_chrY_T0000813;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000813:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9427615	9427760	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000813;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000813;transcript_name=CHM13_chrY_T0000813;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000813:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9427761	9427846	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000813;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000813;transcript_name=CHM13_chrY_T0000813;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000813:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9427847	9427948	.	-	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000813;gene_id=CHM13_chrY_G0000251;Parent=CHM13_chrY_T0000813;transcript_name=CHM13_chrY_T0000813;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000813:3;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9427612	9429578	.	-	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000225560.7;gene_id=CHM13_chrY_G0000252;gene_biotype=transcribed_processed_pseudogene;gene_name=FAM197Y8;gene_sources=liftoff;ID=CHM13_chrY_G0000252;Name=FAM197Y8
CHM13_chrY	CAT	transcript	9427612	9429578	1000	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000814;gene_id=CHM13_chrY_G0000252;Parent=CHM13_chrY_G0000252;transcript_name=CHM13_chrY_T0000814;gene_name=FAM197Y8;ID=CHM13_chrY_T0000814;Name=FAM197Y8
CHM13_chrY	CAT	exon	9427612	9427760	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000814;gene_id=CHM13_chrY_G0000252;Parent=CHM13_chrY_T0000814;transcript_name=CHM13_chrY_T0000814;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000814:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9427761	9427846	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000814;gene_id=CHM13_chrY_G0000252;Parent=CHM13_chrY_T0000814;transcript_name=CHM13_chrY_T0000814;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000814:0;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9427847	9427956	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000814;gene_id=CHM13_chrY_G0000252;Parent=CHM13_chrY_T0000814;transcript_name=CHM13_chrY_T0000814;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000814:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9427957	9429277	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000814;gene_id=CHM13_chrY_G0000252;Parent=CHM13_chrY_T0000814;transcript_name=CHM13_chrY_T0000814;gene_name=FAM197Y8;ID=intron:CHM13_chrY_T0000814:1;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9429278	9429578	.	-	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=CHM13_chrY_T0000814;gene_id=CHM13_chrY_G0000252;Parent=CHM13_chrY_T0000814;transcript_name=CHM13_chrY_T0000814;gene_name=FAM197Y8;ID=exon:CHM13_chrY_T0000814:2;Name=FAM197Y8;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9430601	9433369	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_6;gene_id=CHM13_chrY_G0000253;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000253;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	9430601	9433369	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_G0000253;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000815;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9430601	9430693	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000815;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000815:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9430694	9430954	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000815;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000815:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9430955	9431092	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000815;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000815:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431093	9431699	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000815;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000815:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431700	9431777	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000815;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000815:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431778	9431905	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000815;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000815:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431906	9432017	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000815;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000815:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432018	9432118	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000815;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000815:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432119	9432264	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000815;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000815:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432265	9432370	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000815;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000815:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432371	9432452	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000815;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000815:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432453	9433146	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000815;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000815:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9433147	9433369	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000815;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000815;transcript_name=CHM13_chrY_T0000815;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000815:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9430613	9433357	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_G0000253;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000817;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9430613	9430693	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000817;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000817:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9430694	9430954	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000817;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000817:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9430955	9431092	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000817;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000817:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431093	9431699	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000817;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000817:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431700	9431777	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000817;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000817:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431778	9431905	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000817;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000817:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431906	9432017	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000817;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000817:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432018	9432125	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000817;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000817:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432126	9432264	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000817;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000817:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432265	9432370	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000817;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000817:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432371	9432452	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000817;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000817:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432453	9433146	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000817;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000817:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9433147	9433357	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000817;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000817;transcript_name=CHM13_chrY_T0000817;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000817:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9430622	9433364	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_G0000253;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000818;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9430622	9430693	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000818;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000818:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9430694	9430954	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000818;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000818:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9430955	9431092	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000818;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000818:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431093	9431699	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000818;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000818:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431700	9431777	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000818;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000818:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431778	9431905	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000818;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000818:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431906	9432017	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000818;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000818:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432018	9432118	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000818;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000818:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432119	9432264	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000818;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000818:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432265	9432359	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000818;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000818:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432360	9432452	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000818;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000818:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432453	9433146	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000818;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000818:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9433147	9433364	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000818;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000818;transcript_name=CHM13_chrY_T0000818;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000818:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9430824	9433362	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000819;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_G0000253;transcript_name=CHM13_chrY_T0000819;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000819;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9430824	9431092	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000819;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000819;transcript_name=CHM13_chrY_T0000819;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000819:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431093	9431699	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000819;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000819;transcript_name=CHM13_chrY_T0000819;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000819:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431700	9431777	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000819;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000819;transcript_name=CHM13_chrY_T0000819;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000819:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431778	9431905	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000819;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000819;transcript_name=CHM13_chrY_T0000819;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000819:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431906	9432017	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000819;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000819;transcript_name=CHM13_chrY_T0000819;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000819:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432018	9432118	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000819;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000819;transcript_name=CHM13_chrY_T0000819;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000819:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432119	9432264	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000819;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000819;transcript_name=CHM13_chrY_T0000819;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000819:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432265	9432370	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000819;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000819;transcript_name=CHM13_chrY_T0000819;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000819:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432371	9432452	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000819;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000819;transcript_name=CHM13_chrY_T0000819;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000819:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432453	9433146	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000819;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000819;transcript_name=CHM13_chrY_T0000819;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000819:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9433147	9433362	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000819;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000819;transcript_name=CHM13_chrY_T0000819;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000819:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9430920	9433357	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000820;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_G0000253;transcript_name=CHM13_chrY_T0000820;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000820;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9430920	9431092	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000820;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000820;transcript_name=CHM13_chrY_T0000820;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000820:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431093	9431699	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000820;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000820;transcript_name=CHM13_chrY_T0000820;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000820:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431700	9431777	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000820;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000820;transcript_name=CHM13_chrY_T0000820;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000820:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431778	9431905	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000820;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000820;transcript_name=CHM13_chrY_T0000820;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000820:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431906	9432017	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000820;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000820;transcript_name=CHM13_chrY_T0000820;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000820:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432018	9432125	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000820;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000820;transcript_name=CHM13_chrY_T0000820;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000820:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432126	9432264	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000820;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000820;transcript_name=CHM13_chrY_T0000820;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000820:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432265	9432370	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000820;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000820;transcript_name=CHM13_chrY_T0000820;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000820:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432371	9432452	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000820;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000820;transcript_name=CHM13_chrY_T0000820;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000820:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432453	9433146	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000820;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000820;transcript_name=CHM13_chrY_T0000820;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000820:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9433147	9433357	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000820;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000820;transcript_name=CHM13_chrY_T0000820;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000820:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9431046	9433368	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000821;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_G0000253;transcript_name=CHM13_chrY_T0000821;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000821;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9431046	9431148	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000821;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000821;transcript_name=CHM13_chrY_T0000821;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000821:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431149	9431717	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000821;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000821;transcript_name=CHM13_chrY_T0000821;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000821:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431718	9431777	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000821;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000821;transcript_name=CHM13_chrY_T0000821;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000821:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431778	9431905	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000821;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000821;transcript_name=CHM13_chrY_T0000821;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000821:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431906	9432017	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000821;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000821;transcript_name=CHM13_chrY_T0000821;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000821:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432018	9432118	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000821;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000821;transcript_name=CHM13_chrY_T0000821;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000821:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432119	9432264	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000821;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000821;transcript_name=CHM13_chrY_T0000821;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000821:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432265	9432370	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000821;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000821;transcript_name=CHM13_chrY_T0000821;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000821:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432371	9432452	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000821;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000821;transcript_name=CHM13_chrY_T0000821;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000821:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432453	9433146	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000821;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000821;transcript_name=CHM13_chrY_T0000821;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000821:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9433147	9433368	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000821;gene_id=CHM13_chrY_G0000253;Parent=CHM13_chrY_T0000821;transcript_name=CHM13_chrY_T0000821;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000821:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9430607	9433169	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_6;gene_id=CHM13_chrY_G0000254;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=CHM13_chrY_G0000254;Name=TSPY6P
CHM13_chrY	CAT	transcript	9430607	9433169	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_G0000254;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=CHM13_chrY_T0000816;Name=TSPY6P
CHM13_chrY	CAT	exon	9430607	9430817	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_T0000816;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000816:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9430818	9430825	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_T0000816;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000816:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9430826	9431092	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_T0000816;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000816:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431093	9431699	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_T0000816;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000816:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431700	9431777	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_T0000816;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000816:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431778	9431905	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_T0000816;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000816:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431906	9432017	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_T0000816;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000816:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432018	9432118	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_T0000816;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000816:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432119	9432264	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_T0000816;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000816:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432265	9432370	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_T0000816;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000816:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432371	9432452	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_T0000816;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000816:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432453	9433146	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_T0000816;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000816:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9433147	9433169	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000816;gene_id=CHM13_chrY_G0000254;Parent=CHM13_chrY_T0000816;transcript_name=CHM13_chrY_T0000816;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000816:6;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9431747	9433364	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=CHM13_chrY_G0000255;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000255;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	9431747	9433355	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000822;gene_id=CHM13_chrY_G0000255;Parent=CHM13_chrY_G0000255;transcript_name=CHM13_chrY_T0000822;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000822;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9431747	9431777	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000822;gene_id=CHM13_chrY_G0000255;Parent=CHM13_chrY_T0000822;transcript_name=CHM13_chrY_T0000822;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000822:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9431778	9431905	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000822;gene_id=CHM13_chrY_G0000255;Parent=CHM13_chrY_T0000822;transcript_name=CHM13_chrY_T0000822;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000822:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9431906	9432264	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000822;gene_id=CHM13_chrY_G0000255;Parent=CHM13_chrY_T0000822;transcript_name=CHM13_chrY_T0000822;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000822:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432265	9432370	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000822;gene_id=CHM13_chrY_G0000255;Parent=CHM13_chrY_T0000822;transcript_name=CHM13_chrY_T0000822;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000822:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9432371	9432452	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000822;gene_id=CHM13_chrY_G0000255;Parent=CHM13_chrY_T0000822;transcript_name=CHM13_chrY_T0000822;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000822:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432453	9433146	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000822;gene_id=CHM13_chrY_G0000255;Parent=CHM13_chrY_T0000822;transcript_name=CHM13_chrY_T0000822;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000822:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9433147	9433355	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000822;gene_id=CHM13_chrY_G0000255;Parent=CHM13_chrY_T0000822;transcript_name=CHM13_chrY_T0000822;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000822:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9432292	9433364	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000823;gene_id=CHM13_chrY_G0000255;Parent=CHM13_chrY_G0000255;transcript_name=CHM13_chrY_T0000823;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000823;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9432292	9432452	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000823;gene_id=CHM13_chrY_G0000255;Parent=CHM13_chrY_T0000823;transcript_name=CHM13_chrY_T0000823;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000823:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9432453	9433146	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000823;gene_id=CHM13_chrY_G0000255;Parent=CHM13_chrY_T0000823;transcript_name=CHM13_chrY_T0000823;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000823:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9433147	9433364	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000823;gene_id=CHM13_chrY_G0000255;Parent=CHM13_chrY_T0000823;transcript_name=CHM13_chrY_T0000823;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000823:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9440586	9448279	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_7;gene_id=CHM13_chrY_G0000256;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000256;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9440586	9448279	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000824;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_G0000256;transcript_name=CHM13_chrY_T0000824;gene_name=FAM197Y9;ID=CHM13_chrY_T0000824;Name=FAM197Y9
CHM13_chrY	CAT	exon	9440586	9442713	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000824;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_T0000824;transcript_name=CHM13_chrY_T0000824;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000824:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9442714	9446264	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000824;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_T0000824;transcript_name=CHM13_chrY_T0000824;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000824:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9446265	9446350	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000824;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_T0000824;transcript_name=CHM13_chrY_T0000824;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000824:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9446351	9448159	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000824;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_T0000824;transcript_name=CHM13_chrY_T0000824;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000824:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9448160	9448279	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000824;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_T0000824;transcript_name=CHM13_chrY_T0000824;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000824:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9442654	9448261	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000825;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_G0000256;transcript_name=CHM13_chrY_T0000825;gene_name=FAM197Y9;ID=CHM13_chrY_T0000825;Name=FAM197Y9
CHM13_chrY	CAT	exon	9442654	9442713	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000825;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_T0000825;transcript_name=CHM13_chrY_T0000825;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000825:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9442714	9446264	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000825;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_T0000825;transcript_name=CHM13_chrY_T0000825;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000825:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9446265	9446423	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000825;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_T0000825;transcript_name=CHM13_chrY_T0000825;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000825:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9446424	9447927	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000825;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_T0000825;transcript_name=CHM13_chrY_T0000825;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000825:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9447928	9448073	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000825;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_T0000825;transcript_name=CHM13_chrY_T0000825;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000825:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9448074	9448159	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000825;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_T0000825;transcript_name=CHM13_chrY_T0000825;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000825:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9448160	9448261	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000825;gene_id=CHM13_chrY_G0000256;Parent=CHM13_chrY_T0000825;transcript_name=CHM13_chrY_T0000825;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000825:3;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9447928	9449922	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_8;gene_id=CHM13_chrY_G0000257;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000257;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9447928	9449922	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000826;gene_id=CHM13_chrY_G0000257;Parent=CHM13_chrY_G0000257;transcript_name=CHM13_chrY_T0000826;gene_name=FAM197Y9;ID=CHM13_chrY_T0000826;Name=FAM197Y9
CHM13_chrY	CAT	exon	9447928	9448073	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000826;gene_id=CHM13_chrY_G0000257;Parent=CHM13_chrY_T0000826;transcript_name=CHM13_chrY_T0000826;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000826:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9448074	9448185	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000826;gene_id=CHM13_chrY_G0000257;Parent=CHM13_chrY_T0000826;transcript_name=CHM13_chrY_T0000826;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000826:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9448186	9448269	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000826;gene_id=CHM13_chrY_G0000257;Parent=CHM13_chrY_T0000826;transcript_name=CHM13_chrY_T0000826;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000826:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9448270	9449612	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000826;gene_id=CHM13_chrY_G0000257;Parent=CHM13_chrY_T0000826;transcript_name=CHM13_chrY_T0000826;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000826:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9449613	9449922	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000826;gene_id=CHM13_chrY_G0000257;Parent=CHM13_chrY_T0000826;transcript_name=CHM13_chrY_T0000826;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000826:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9450876	9453690	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=CHM13_chrY_G0000258;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=CHM13_chrY_G0000258;Name=TSPY9
CHM13_chrY	CAT	transcript	9450876	9453690	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_G0000258;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=CHM13_chrY_T0000827;Name=TSPY9
CHM13_chrY	CAT	exon	9450876	9451425	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000827:0;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9450922	9451425	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000827:0;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9450922	9450924	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=start_codon:CHM13_chrY_T0000827;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9451426	9452032	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000827:0;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9452033	9452110	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000827:1;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9452033	9452110	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000827:1;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9452111	9452238	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000827:1;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9452239	9452350	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000827:2;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9452239	9452350	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000827:2;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9452351	9452451	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000827:2;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9452452	9452597	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000827:3;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9452452	9452597	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000827:3;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9452598	9452703	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000827:3;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9452704	9452785	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000827:4;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9452704	9452785	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000827:4;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9452786	9453479	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000827:4;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9453480	9453690	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000827:5;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9453480	9453502	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000827:5;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9453500	9453502	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000827;gene_id=CHM13_chrY_G0000258;Parent=CHM13_chrY_T0000827;transcript_name=CHM13_chrY_T0000827;gene_name=TSPY9;ID=stop_codon:CHM13_chrY_T0000827;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9462814	9468561	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000259;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000259;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9462814	9468561	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000828;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_G0000259;transcript_name=CHM13_chrY_T0000828;gene_name=FAM197Y5;ID=CHM13_chrY_T0000828;Name=FAM197Y5
CHM13_chrY	CAT	exon	9462814	9463003	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000828;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_T0000828;transcript_name=CHM13_chrY_T0000828;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000828:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9463004	9466552	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000828;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_T0000828;transcript_name=CHM13_chrY_T0000828;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000828:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9466553	9466638	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000828;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_T0000828;transcript_name=CHM13_chrY_T0000828;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000828:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9466639	9468447	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000828;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_T0000828;transcript_name=CHM13_chrY_T0000828;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000828:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9468448	9468561	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000828;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_T0000828;transcript_name=CHM13_chrY_T0000828;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000828:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9462944	9468549	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000829;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_G0000259;transcript_name=CHM13_chrY_T0000829;gene_name=FAM197Y5;ID=CHM13_chrY_T0000829;Name=FAM197Y5
CHM13_chrY	CAT	exon	9462944	9463003	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000829;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_T0000829;transcript_name=CHM13_chrY_T0000829;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000829:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9463004	9466552	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000829;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_T0000829;transcript_name=CHM13_chrY_T0000829;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000829:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9466553	9466711	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000829;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_T0000829;transcript_name=CHM13_chrY_T0000829;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000829:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9466712	9468215	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000829;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_T0000829;transcript_name=CHM13_chrY_T0000829;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000829:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9468216	9468361	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000829;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_T0000829;transcript_name=CHM13_chrY_T0000829;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000829:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9468362	9468447	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000829;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_T0000829;transcript_name=CHM13_chrY_T0000829;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000829:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9468448	9468549	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000829;gene_id=CHM13_chrY_G0000259;Parent=CHM13_chrY_T0000829;transcript_name=CHM13_chrY_T0000829;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000829:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9468216	9470208	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_4;gene_id=CHM13_chrY_G0000260;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000260;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9468216	9470208	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000830;gene_id=CHM13_chrY_G0000260;Parent=CHM13_chrY_G0000260;transcript_name=CHM13_chrY_T0000830;gene_name=FAM197Y5;ID=CHM13_chrY_T0000830;Name=FAM197Y5
CHM13_chrY	CAT	exon	9468216	9468361	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000830;gene_id=CHM13_chrY_G0000260;Parent=CHM13_chrY_T0000830;transcript_name=CHM13_chrY_T0000830;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000830:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9468362	9469897	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000830;gene_id=CHM13_chrY_G0000260;Parent=CHM13_chrY_T0000830;transcript_name=CHM13_chrY_T0000830;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000830:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9469898	9470208	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000830;gene_id=CHM13_chrY_G0000260;Parent=CHM13_chrY_T0000830;transcript_name=CHM13_chrY_T0000830;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000830:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9471162	9473958	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;alternative_source_transcripts=ENST00000428845.6;gene_id=CHM13_chrY_G0000261;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=CHM13_chrY_G0000261;Name=TSPY3
CHM13_chrY	CAT	transcript	9471162	9473958	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_G0000261;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=CHM13_chrY_T0000831;Name=TSPY3
CHM13_chrY	CAT	exon	9471162	9471693	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000831:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9471208	9471693	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000831:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9471208	9471210	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000831;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9471694	9472300	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000831:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472301	9472378	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000831:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9472301	9472378	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000831:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9472379	9472506	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000831:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472507	9472618	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000831:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9472507	9472618	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000831:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9472619	9472719	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000831:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472720	9472865	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000831:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9472720	9472865	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000831:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9472866	9472971	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000831:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472972	9473053	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000831:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9472972	9473053	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000831:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9473054	9473747	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000831:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9473748	9473958	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000831:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9473748	9473770	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000831:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9473768	9473770	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000428845.6;transcript_id=CHM13_chrY_T0000831;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000831;transcript_name=CHM13_chrY_T0000831;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000831;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9471208	9473957	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_G0000261;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=CHM13_chrY_T0000832;Name=TSPY3
CHM13_chrY	CAT	exon	9471208	9471693	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000832:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9471208	9471693	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000832:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9471208	9471210	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000832;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9471694	9472300	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000832:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472301	9472378	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000832:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9472301	9472378	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000832:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9472379	9472506	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000832:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472507	9472618	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000832:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9472507	9472618	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000832:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9472619	9472719	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000832:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472720	9472865	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000832:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9472720	9472865	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000832:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9472866	9472960	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000832:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472961	9473053	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000832:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9472961	9473023	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000832:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9473021	9473023	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000832;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9473054	9473747	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000832:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9473748	9473957	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000444056.1;transcript_id=CHM13_chrY_T0000832;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000832;transcript_name=CHM13_chrY_T0000832;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000832:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9471208	9473770	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_G0000261;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=CHM13_chrY_T0000833;Name=TSPY3
CHM13_chrY	CAT	exon	9471208	9471294	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000833:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9471208	9471294	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000833:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9471208	9471210	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000833;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9471295	9471555	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000833:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9471556	9471693	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000833:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9471556	9471693	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000833:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9471694	9472300	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000833:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472301	9472378	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000833:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9472301	9472378	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000833:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9472379	9472506	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000833:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472507	9472618	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000833:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9472507	9472618	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000833:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9472619	9472719	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000833:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472720	9472865	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000833:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9472720	9472865	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000833:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9472866	9472971	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000833:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472972	9473053	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000833:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9472972	9473053	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000833:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9473054	9473747	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000833:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9473748	9473770	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000833:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9473748	9473770	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000833:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9473768	9473770	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000833;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000833;transcript_name=CHM13_chrY_T0000833;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000833;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9471208	9473964	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=CHM13_chrY_T0000834;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_G0000261;transcript_name=CHM13_chrY_T0000834;gene_name=TSPY3;ID=CHM13_chrY_T0000834;Name=TSPY3
CHM13_chrY	CAT	exon	9471208	9471693	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=CHM13_chrY_T0000834;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000834;transcript_name=CHM13_chrY_T0000834;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000834:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9471694	9472300	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=CHM13_chrY_T0000834;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000834;transcript_name=CHM13_chrY_T0000834;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000834:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472301	9472378	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=CHM13_chrY_T0000834;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000834;transcript_name=CHM13_chrY_T0000834;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000834:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9472379	9472506	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=CHM13_chrY_T0000834;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000834;transcript_name=CHM13_chrY_T0000834;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000834:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472507	9473053	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=CHM13_chrY_T0000834;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000834;transcript_name=CHM13_chrY_T0000834;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000834:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9473054	9473180	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=CHM13_chrY_T0000834;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000834;transcript_name=CHM13_chrY_T0000834;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000834:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9473181	9473964	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000489397.1;transcript_id=CHM13_chrY_T0000834;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000834;transcript_name=CHM13_chrY_T0000834;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000834:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9472568	9473949	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000835;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_G0000261;transcript_name=CHM13_chrY_T0000835;gene_name=TSPY3;ID=CHM13_chrY_T0000835;Name=TSPY3
CHM13_chrY	CAT	exon	9472568	9472865	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000835;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000835;transcript_name=CHM13_chrY_T0000835;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000835:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9472866	9472960	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000835;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000835;transcript_name=CHM13_chrY_T0000835;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000835:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9472961	9473053	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000835;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000835;transcript_name=CHM13_chrY_T0000835;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000835:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9473054	9473747	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000835;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000835;transcript_name=CHM13_chrY_T0000835;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000835:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9473748	9473949	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000835;gene_id=CHM13_chrY_G0000261;Parent=CHM13_chrY_T0000835;transcript_name=CHM13_chrY_T0000835;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000835:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9483098	9488845	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000262;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000262;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9483098	9488845	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000836;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_G0000262;transcript_name=CHM13_chrY_T0000836;gene_name=FAM197Y5;ID=CHM13_chrY_T0000836;Name=FAM197Y5
CHM13_chrY	CAT	exon	9483098	9483287	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000836;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_T0000836;transcript_name=CHM13_chrY_T0000836;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000836:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9483288	9486842	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000836;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_T0000836;transcript_name=CHM13_chrY_T0000836;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000836:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9486843	9486928	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000836;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_T0000836;transcript_name=CHM13_chrY_T0000836;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000836:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9486929	9488731	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000836;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_T0000836;transcript_name=CHM13_chrY_T0000836;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000836:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9488732	9488845	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000836;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_T0000836;transcript_name=CHM13_chrY_T0000836;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000836:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9483228	9488833	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000837;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_G0000262;transcript_name=CHM13_chrY_T0000837;gene_name=FAM197Y5;ID=CHM13_chrY_T0000837;Name=FAM197Y5
CHM13_chrY	CAT	exon	9483228	9483287	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000837;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_T0000837;transcript_name=CHM13_chrY_T0000837;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000837:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9483288	9486842	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000837;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_T0000837;transcript_name=CHM13_chrY_T0000837;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000837:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9486843	9487001	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000837;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_T0000837;transcript_name=CHM13_chrY_T0000837;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000837:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9487002	9488499	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000837;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_T0000837;transcript_name=CHM13_chrY_T0000837;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000837:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9488500	9488645	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000837;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_T0000837;transcript_name=CHM13_chrY_T0000837;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000837:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9488646	9488731	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000837;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_T0000837;transcript_name=CHM13_chrY_T0000837;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000837:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9488732	9488833	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000837;gene_id=CHM13_chrY_G0000262;Parent=CHM13_chrY_T0000837;transcript_name=CHM13_chrY_T0000837;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000837:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9488500	9490492	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_12;gene_id=CHM13_chrY_G0000263;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000263;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9488500	9490492	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_12;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_12;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000838;gene_id=CHM13_chrY_G0000263;Parent=CHM13_chrY_G0000263;transcript_name=CHM13_chrY_T0000838;gene_name=FAM197Y5;ID=CHM13_chrY_T0000838;Name=FAM197Y5
CHM13_chrY	CAT	exon	9488500	9488645	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_12;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_12;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000838;gene_id=CHM13_chrY_G0000263;Parent=CHM13_chrY_T0000838;transcript_name=CHM13_chrY_T0000838;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000838:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9488646	9490181	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_12;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_12;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000838;gene_id=CHM13_chrY_G0000263;Parent=CHM13_chrY_T0000838;transcript_name=CHM13_chrY_T0000838;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000838:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9490182	9490492	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_12;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_12;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000838;gene_id=CHM13_chrY_G0000263;Parent=CHM13_chrY_T0000838;transcript_name=CHM13_chrY_T0000838;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000838:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9491446	9494260	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=CHM13_chrY_G0000264;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=CHM13_chrY_G0000264;Name=TSPY4
CHM13_chrY	CAT	transcript	9491446	9494260	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_G0000264;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=CHM13_chrY_T0000839;Name=TSPY4
CHM13_chrY	CAT	exon	9491446	9491995	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000839:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9491492	9491995	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000839:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9491492	9491494	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000839;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9491996	9492602	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000839:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9492603	9492680	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000839:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9492603	9492680	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000839:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9492681	9492808	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000839:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9492809	9492920	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000839:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9492809	9492920	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000839:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9492921	9493021	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000839:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9493022	9493167	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000839:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9493022	9493167	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000839:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9493168	9493273	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000839:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9493274	9493355	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000839:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9493274	9493355	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000839:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9493356	9494049	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000839:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9494050	9494260	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000839:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9494050	9494072	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000839:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9494070	9494072	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000839;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000839;transcript_name=CHM13_chrY_T0000839;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000839;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9491446	9494139	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_G0000264;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=CHM13_chrY_T0000840;Name=TSPY4
CHM13_chrY	CAT	exon	9491446	9491578	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000840:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9491492	9491578	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000840:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9491492	9491494	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000840;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9491579	9491857	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000840:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9491858	9491995	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000840:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9491858	9491995	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000840:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9491996	9492602	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000840:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9492603	9492680	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000840:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9492603	9492680	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000840:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9492681	9492808	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000840:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9492809	9492920	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000840:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9492809	9492920	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000840:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9492921	9493021	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000840:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9493022	9493167	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000840:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9493022	9493167	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000840:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9493168	9493273	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000840:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9493274	9493355	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000840:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9493274	9493355	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000840:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9493356	9494049	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000840:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9494050	9494139	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000840:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9494050	9494072	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000840:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9494070	9494072	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000840;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000840;transcript_name=CHM13_chrY_T0000840;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000840;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9491492	9494259	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_G0000264;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=CHM13_chrY_T0000841;Name=TSPY4
CHM13_chrY	CAT	exon	9491492	9491995	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000841:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9491492	9491995	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000841:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9491492	9491494	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000841;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9491996	9492602	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000841:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9492603	9492680	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000841:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9492603	9492680	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000841:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9492681	9492808	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000841:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9492809	9492920	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000841:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9492809	9492920	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000841:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9492921	9493021	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000841:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9493022	9493167	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000841:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9493022	9493167	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000841:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9493168	9493262	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000841:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9493263	9493355	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000841:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9493263	9493325	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000841:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9493323	9493325	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000841;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9493356	9494049	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000841:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9494050	9494259	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000841;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000841;transcript_name=CHM13_chrY_T0000841;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000841:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9491492	9494266	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000842;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_G0000264;transcript_name=CHM13_chrY_T0000842;gene_name=TSPY4;ID=CHM13_chrY_T0000842;Name=TSPY4
CHM13_chrY	CAT	exon	9491492	9491995	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000842;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000842;transcript_name=CHM13_chrY_T0000842;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000842:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9491996	9492602	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000842;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000842;transcript_name=CHM13_chrY_T0000842;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000842:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9492603	9492680	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000842;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000842;transcript_name=CHM13_chrY_T0000842;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000842:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9492681	9492808	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000842;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000842;transcript_name=CHM13_chrY_T0000842;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000842:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9492809	9493355	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000842;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000842;transcript_name=CHM13_chrY_T0000842;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000842:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9493356	9493482	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000842;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000842;transcript_name=CHM13_chrY_T0000842;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000842:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9493483	9494266	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000842;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000842;transcript_name=CHM13_chrY_T0000842;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000842:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9492870	9494251	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000843;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_G0000264;transcript_name=CHM13_chrY_T0000843;gene_name=TSPY4;ID=CHM13_chrY_T0000843;Name=TSPY4
CHM13_chrY	CAT	exon	9492870	9493167	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000843;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000843;transcript_name=CHM13_chrY_T0000843;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000843:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9493168	9493262	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000843;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000843;transcript_name=CHM13_chrY_T0000843;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000843:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9493263	9493355	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000843;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000843;transcript_name=CHM13_chrY_T0000843;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000843:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9493356	9494049	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000843;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000843;transcript_name=CHM13_chrY_T0000843;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000843:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9494050	9494251	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000843;gene_id=CHM13_chrY_G0000264;Parent=CHM13_chrY_T0000843;transcript_name=CHM13_chrY_T0000843;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000843:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9503388	9509127	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000265;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000265;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9503388	9509127	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000844;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_G0000265;transcript_name=CHM13_chrY_T0000844;gene_name=FAM197Y5;ID=CHM13_chrY_T0000844;Name=FAM197Y5
CHM13_chrY	CAT	exon	9503388	9503577	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000844;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_T0000844;transcript_name=CHM13_chrY_T0000844;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000844:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9503578	9507126	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000844;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_T0000844;transcript_name=CHM13_chrY_T0000844;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000844:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9507127	9507212	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000844;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_T0000844;transcript_name=CHM13_chrY_T0000844;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000844:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9507213	9509013	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000844;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_T0000844;transcript_name=CHM13_chrY_T0000844;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000844:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9509014	9509127	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000844;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_T0000844;transcript_name=CHM13_chrY_T0000844;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000844:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9503518	9509115	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000845;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_G0000265;transcript_name=CHM13_chrY_T0000845;gene_name=FAM197Y5;ID=CHM13_chrY_T0000845;Name=FAM197Y5
CHM13_chrY	CAT	exon	9503518	9503577	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000845;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_T0000845;transcript_name=CHM13_chrY_T0000845;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000845:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9503578	9507126	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000845;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_T0000845;transcript_name=CHM13_chrY_T0000845;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000845:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9507127	9507285	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000845;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_T0000845;transcript_name=CHM13_chrY_T0000845;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000845:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9507286	9508781	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000845;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_T0000845;transcript_name=CHM13_chrY_T0000845;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000845:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9508782	9508927	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000845;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_T0000845;transcript_name=CHM13_chrY_T0000845;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000845:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9508928	9509013	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000845;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_T0000845;transcript_name=CHM13_chrY_T0000845;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000845:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9509014	9509115	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000845;gene_id=CHM13_chrY_G0000265;Parent=CHM13_chrY_T0000845;transcript_name=CHM13_chrY_T0000845;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000845:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9508782	9510774	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_7;gene_id=CHM13_chrY_G0000266;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000266;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9508782	9510774	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000846;gene_id=CHM13_chrY_G0000266;Parent=CHM13_chrY_G0000266;transcript_name=CHM13_chrY_T0000846;gene_name=FAM197Y5;ID=CHM13_chrY_T0000846;Name=FAM197Y5
CHM13_chrY	CAT	exon	9508782	9508927	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000846;gene_id=CHM13_chrY_G0000266;Parent=CHM13_chrY_T0000846;transcript_name=CHM13_chrY_T0000846;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000846:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9508928	9510463	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000846;gene_id=CHM13_chrY_G0000266;Parent=CHM13_chrY_T0000846;transcript_name=CHM13_chrY_T0000846;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000846:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9510464	9510774	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000846;gene_id=CHM13_chrY_G0000266;Parent=CHM13_chrY_T0000846;transcript_name=CHM13_chrY_T0000846;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000846:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9511728	9514524	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=CHM13_chrY_G0000267;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=CHM13_chrY_G0000267;Name=TSPY3
CHM13_chrY	CAT	transcript	9511728	9514524	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_G0000267;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=CHM13_chrY_T0000847;Name=TSPY3
CHM13_chrY	CAT	exon	9511728	9512259	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000847:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9511774	9512259	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000847:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9511774	9511776	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000847;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9512260	9512866	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000847:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9512867	9512944	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000847:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9512867	9512944	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000847:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9512945	9513072	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000847:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9513073	9513184	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000847:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9513073	9513184	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000847:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9513185	9513285	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000847:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9513286	9513431	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000847:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9513286	9513431	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000847:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9513432	9513537	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000847:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9513538	9513619	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000847:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9513538	9513619	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000847:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9513620	9514313	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000847:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9514314	9514524	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000847:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9514314	9514336	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000847:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9514334	9514336	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000847;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000847;transcript_name=CHM13_chrY_T0000847;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000847;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9511774	9514523	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_G0000267;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=CHM13_chrY_T0000848;Name=TSPY3
CHM13_chrY	CAT	exon	9511774	9512259	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000848:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9511774	9512259	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000848:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9511774	9511776	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000848;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9512260	9512866	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000848:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9512867	9512944	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000848:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9512867	9512944	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000848:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9512945	9513072	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000848:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9513073	9513184	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000848:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9513073	9513184	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000848:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9513185	9513285	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000848:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9513286	9513431	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000848:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9513286	9513431	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000848:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9513432	9513526	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000848:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9513527	9513619	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000848:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9513527	9513589	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000848:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9513587	9513589	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000848;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9513620	9514313	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000848:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9514314	9514523	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000848;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000848;transcript_name=CHM13_chrY_T0000848;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000848:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9511774	9514336	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_G0000267;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=CHM13_chrY_T0000849;Name=TSPY3
CHM13_chrY	CAT	exon	9511774	9511860	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000849:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9511774	9511860	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000849:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9511774	9511776	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000849;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9511861	9512121	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000849:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9512122	9512259	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000849:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9512122	9512259	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000849:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9512260	9512866	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000849:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9512867	9512944	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000849:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9512867	9512944	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000849:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9512945	9513072	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000849:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9513073	9513184	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000849:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9513073	9513184	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000849:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9513185	9513285	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000849:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9513286	9513431	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000849:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9513286	9513431	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000849:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9513432	9513537	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000849:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9513538	9513619	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000849:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9513538	9513619	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000849:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9513620	9514313	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000849:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9514314	9514336	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000849:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9514314	9514336	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000849:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9514334	9514336	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000849;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000849;transcript_name=CHM13_chrY_T0000849;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000849;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9511774	9514530	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000850;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_G0000267;transcript_name=CHM13_chrY_T0000850;gene_name=TSPY3;ID=CHM13_chrY_T0000850;Name=TSPY3
CHM13_chrY	CAT	exon	9511774	9512259	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000850;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000850;transcript_name=CHM13_chrY_T0000850;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000850:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9512260	9512866	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000850;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000850;transcript_name=CHM13_chrY_T0000850;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000850:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9512867	9512944	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000850;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000850;transcript_name=CHM13_chrY_T0000850;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000850:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9512945	9513072	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000850;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000850;transcript_name=CHM13_chrY_T0000850;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000850:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9513073	9513619	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000850;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000850;transcript_name=CHM13_chrY_T0000850;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000850:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9513620	9513746	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000850;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000850;transcript_name=CHM13_chrY_T0000850;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000850:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9513747	9514530	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000850;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000850;transcript_name=CHM13_chrY_T0000850;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000850:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9513134	9514515	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000851;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_G0000267;transcript_name=CHM13_chrY_T0000851;gene_name=TSPY3;ID=CHM13_chrY_T0000851;Name=TSPY3
CHM13_chrY	CAT	exon	9513134	9513431	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000851;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000851;transcript_name=CHM13_chrY_T0000851;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000851:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9513432	9513526	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000851;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000851;transcript_name=CHM13_chrY_T0000851;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000851:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9513527	9513619	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000851;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000851;transcript_name=CHM13_chrY_T0000851;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000851:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9513620	9514313	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000851;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000851;transcript_name=CHM13_chrY_T0000851;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000851:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9514314	9514515	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000851;gene_id=CHM13_chrY_G0000267;Parent=CHM13_chrY_T0000851;transcript_name=CHM13_chrY_T0000851;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000851:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9523650	9529392	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000268;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000268;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9523650	9529392	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000852;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_G0000268;transcript_name=CHM13_chrY_T0000852;gene_name=FAM197Y5;ID=CHM13_chrY_T0000852;Name=FAM197Y5
CHM13_chrY	CAT	exon	9523650	9523839	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000852;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_T0000852;transcript_name=CHM13_chrY_T0000852;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000852:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9523840	9527393	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000852;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_T0000852;transcript_name=CHM13_chrY_T0000852;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000852:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9527394	9527479	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000852;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_T0000852;transcript_name=CHM13_chrY_T0000852;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000852:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9527480	9529278	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000852;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_T0000852;transcript_name=CHM13_chrY_T0000852;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000852:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9529279	9529392	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000852;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_T0000852;transcript_name=CHM13_chrY_T0000852;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000852:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9523780	9529380	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000853;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_G0000268;transcript_name=CHM13_chrY_T0000853;gene_name=FAM197Y5;ID=CHM13_chrY_T0000853;Name=FAM197Y5
CHM13_chrY	CAT	exon	9523780	9523839	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000853;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_T0000853;transcript_name=CHM13_chrY_T0000853;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000853:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9523840	9527393	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000853;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_T0000853;transcript_name=CHM13_chrY_T0000853;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000853:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9527394	9527552	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000853;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_T0000853;transcript_name=CHM13_chrY_T0000853;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000853:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9527553	9529046	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000853;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_T0000853;transcript_name=CHM13_chrY_T0000853;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000853:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9529047	9529192	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000853;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_T0000853;transcript_name=CHM13_chrY_T0000853;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000853:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9529193	9529278	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000853;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_T0000853;transcript_name=CHM13_chrY_T0000853;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000853:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9529279	9529380	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000853;gene_id=CHM13_chrY_G0000268;Parent=CHM13_chrY_T0000853;transcript_name=CHM13_chrY_T0000853;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000853:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9529047	9531039	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_16;gene_id=CHM13_chrY_G0000269;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000269;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9529047	9531039	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_16;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_16;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000854;gene_id=CHM13_chrY_G0000269;Parent=CHM13_chrY_G0000269;transcript_name=CHM13_chrY_T0000854;gene_name=FAM197Y5;ID=CHM13_chrY_T0000854;Name=FAM197Y5
CHM13_chrY	CAT	exon	9529047	9529192	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_16;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_16;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000854;gene_id=CHM13_chrY_G0000269;Parent=CHM13_chrY_T0000854;transcript_name=CHM13_chrY_T0000854;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000854:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9529193	9530728	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_16;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_16;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000854;gene_id=CHM13_chrY_G0000269;Parent=CHM13_chrY_T0000854;transcript_name=CHM13_chrY_T0000854;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000854:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9530729	9531039	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_16;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_16;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000854;gene_id=CHM13_chrY_G0000269;Parent=CHM13_chrY_T0000854;transcript_name=CHM13_chrY_T0000854;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000854:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9532033	9534819	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_1;gene_id=CHM13_chrY_G0000270;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000270;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	9532033	9534819	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_G0000270;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000855;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9532033	9532125	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000855;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000855:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9532126	9532404	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000855;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000855:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9532405	9532542	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000855;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000855:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9532543	9533149	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000855;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000855:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533150	9533227	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000855;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000855:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533228	9533355	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000855;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000855:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533356	9533467	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000855;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000855:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533468	9533568	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000855;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000855:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533569	9533714	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000855;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000855:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533715	9533820	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000855;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000855:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533821	9533902	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000855;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000855:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533903	9534596	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000855;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000855:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9534597	9534819	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000855;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000855;transcript_name=CHM13_chrY_T0000855;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000855:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9532045	9534807	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_G0000270;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000857;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9532045	9532125	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000857;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000857:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9532126	9532404	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000857;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000857:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9532405	9532542	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000857;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000857:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9532543	9533149	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000857;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000857:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533150	9533227	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000857;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000857:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533228	9533355	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000857;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000857:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533356	9533467	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000857;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000857:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533468	9533575	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000857;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000857:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533576	9533714	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000857;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000857:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533715	9533820	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000857;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000857:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533821	9533902	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000857;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000857:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533903	9534596	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000857;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000857:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9534597	9534807	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000857;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000857;transcript_name=CHM13_chrY_T0000857;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000857:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9532054	9534814	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_G0000270;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000858;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9532054	9532125	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000858;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000858:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9532126	9532404	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000858;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000858:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9532405	9532542	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000858;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000858:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9532543	9533149	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000858;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000858:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533150	9533227	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000858;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000858:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533228	9533355	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000858;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000858:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533356	9533467	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000858;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000858:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533468	9533568	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000858;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000858:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533569	9533714	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000858;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000858:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533715	9533809	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000858;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000858:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533810	9533902	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000858;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000858:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533903	9534596	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000858;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000858:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9534597	9534814	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000858;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000858;transcript_name=CHM13_chrY_T0000858;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000858:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9532274	9534812	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000859;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_G0000270;transcript_name=CHM13_chrY_T0000859;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000859;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9532274	9532542	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000859;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000859;transcript_name=CHM13_chrY_T0000859;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000859:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9532543	9533149	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000859;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000859;transcript_name=CHM13_chrY_T0000859;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000859:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533150	9533227	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000859;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000859;transcript_name=CHM13_chrY_T0000859;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000859:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533228	9533355	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000859;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000859;transcript_name=CHM13_chrY_T0000859;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000859:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533356	9533467	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000859;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000859;transcript_name=CHM13_chrY_T0000859;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000859:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533468	9533568	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000859;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000859;transcript_name=CHM13_chrY_T0000859;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000859:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533569	9533714	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000859;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000859;transcript_name=CHM13_chrY_T0000859;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000859:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533715	9533820	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000859;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000859;transcript_name=CHM13_chrY_T0000859;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000859:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533821	9533902	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000859;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000859;transcript_name=CHM13_chrY_T0000859;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000859:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533903	9534596	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000859;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000859;transcript_name=CHM13_chrY_T0000859;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000859:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9534597	9534812	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000859;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000859;transcript_name=CHM13_chrY_T0000859;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000859:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9532370	9534807	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000860;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_G0000270;transcript_name=CHM13_chrY_T0000860;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000860;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9532370	9532542	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000860;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000860;transcript_name=CHM13_chrY_T0000860;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000860:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9532543	9533149	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000860;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000860;transcript_name=CHM13_chrY_T0000860;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000860:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533150	9533227	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000860;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000860;transcript_name=CHM13_chrY_T0000860;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000860:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533228	9533355	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000860;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000860;transcript_name=CHM13_chrY_T0000860;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000860:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533356	9533467	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000860;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000860;transcript_name=CHM13_chrY_T0000860;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000860:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533468	9533575	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000860;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000860;transcript_name=CHM13_chrY_T0000860;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000860:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533576	9533714	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000860;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000860;transcript_name=CHM13_chrY_T0000860;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000860:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533715	9533820	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000860;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000860;transcript_name=CHM13_chrY_T0000860;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000860:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533821	9533902	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000860;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000860;transcript_name=CHM13_chrY_T0000860;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000860:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533903	9534596	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000860;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000860;transcript_name=CHM13_chrY_T0000860;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000860:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9534597	9534807	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000860;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000860;transcript_name=CHM13_chrY_T0000860;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000860:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9532496	9534818	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000861;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_G0000270;transcript_name=CHM13_chrY_T0000861;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000861;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9532496	9532598	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000861;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000861;transcript_name=CHM13_chrY_T0000861;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000861:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9532599	9533167	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000861;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000861;transcript_name=CHM13_chrY_T0000861;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000861:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533168	9533227	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000861;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000861;transcript_name=CHM13_chrY_T0000861;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000861:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533228	9533355	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000861;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000861;transcript_name=CHM13_chrY_T0000861;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000861:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533356	9533467	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000861;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000861;transcript_name=CHM13_chrY_T0000861;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000861:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533468	9533568	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000861;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000861;transcript_name=CHM13_chrY_T0000861;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000861:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533569	9533714	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000861;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000861;transcript_name=CHM13_chrY_T0000861;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000861:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533715	9533820	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000861;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000861;transcript_name=CHM13_chrY_T0000861;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000861:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533821	9533902	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000861;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000861;transcript_name=CHM13_chrY_T0000861;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000861:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533903	9534596	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000861;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000861;transcript_name=CHM13_chrY_T0000861;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000861:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9534597	9534818	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000861;gene_id=CHM13_chrY_G0000270;Parent=CHM13_chrY_T0000861;transcript_name=CHM13_chrY_T0000861;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000861:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9532039	9534619	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1;gene_id=CHM13_chrY_G0000271;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=CHM13_chrY_G0000271;Name=TSPY6P
CHM13_chrY	CAT	transcript	9532039	9534619	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_G0000271;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=CHM13_chrY_T0000856;Name=TSPY6P
CHM13_chrY	CAT	exon	9532039	9532257	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_T0000856;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000856:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9532258	9532275	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_T0000856;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000856:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9532276	9532542	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_T0000856;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000856:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9532543	9533149	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_T0000856;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000856:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533150	9533227	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_T0000856;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000856:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533228	9533355	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_T0000856;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000856:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533356	9533467	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_T0000856;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000856:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533468	9533568	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_T0000856;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000856:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533569	9533714	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_T0000856;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000856:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533715	9533820	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_T0000856;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000856:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533821	9533902	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_T0000856;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000856:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533903	9534596	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_T0000856;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000856:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9534597	9534619	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000856;gene_id=CHM13_chrY_G0000271;Parent=CHM13_chrY_T0000856;transcript_name=CHM13_chrY_T0000856;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000856:6;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9533197	9534814	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=CHM13_chrY_G0000272;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000272;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	9533197	9534805	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000862;gene_id=CHM13_chrY_G0000272;Parent=CHM13_chrY_G0000272;transcript_name=CHM13_chrY_T0000862;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000862;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9533197	9533227	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000862;gene_id=CHM13_chrY_G0000272;Parent=CHM13_chrY_T0000862;transcript_name=CHM13_chrY_T0000862;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000862:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533228	9533355	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000862;gene_id=CHM13_chrY_G0000272;Parent=CHM13_chrY_T0000862;transcript_name=CHM13_chrY_T0000862;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000862:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533356	9533714	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000862;gene_id=CHM13_chrY_G0000272;Parent=CHM13_chrY_T0000862;transcript_name=CHM13_chrY_T0000862;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000862:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533715	9533820	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000862;gene_id=CHM13_chrY_G0000272;Parent=CHM13_chrY_T0000862;transcript_name=CHM13_chrY_T0000862;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000862:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9533821	9533902	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000862;gene_id=CHM13_chrY_G0000272;Parent=CHM13_chrY_T0000862;transcript_name=CHM13_chrY_T0000862;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000862:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533903	9534596	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000862;gene_id=CHM13_chrY_G0000272;Parent=CHM13_chrY_T0000862;transcript_name=CHM13_chrY_T0000862;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000862:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9534597	9534805	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000862;gene_id=CHM13_chrY_G0000272;Parent=CHM13_chrY_T0000862;transcript_name=CHM13_chrY_T0000862;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000862:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9533742	9534814	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000863;gene_id=CHM13_chrY_G0000272;Parent=CHM13_chrY_G0000272;transcript_name=CHM13_chrY_T0000863;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000863;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9533742	9533902	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000863;gene_id=CHM13_chrY_G0000272;Parent=CHM13_chrY_T0000863;transcript_name=CHM13_chrY_T0000863;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000863:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9533903	9534596	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000863;gene_id=CHM13_chrY_G0000272;Parent=CHM13_chrY_T0000863;transcript_name=CHM13_chrY_T0000863;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000863:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9534597	9534814	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000863;gene_id=CHM13_chrY_G0000272;Parent=CHM13_chrY_T0000863;transcript_name=CHM13_chrY_T0000863;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000863:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9542009	9549697	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_4;gene_id=CHM13_chrY_G0000273;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000273;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9542009	9549697	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000864;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_G0000273;transcript_name=CHM13_chrY_T0000864;gene_name=FAM197Y9;ID=CHM13_chrY_T0000864;Name=FAM197Y9
CHM13_chrY	CAT	exon	9542009	9544135	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000864;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_T0000864;transcript_name=CHM13_chrY_T0000864;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000864:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9544136	9547686	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000864;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_T0000864;transcript_name=CHM13_chrY_T0000864;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000864:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9547687	9547772	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000864;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_T0000864;transcript_name=CHM13_chrY_T0000864;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000864:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9547773	9549577	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000864;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_T0000864;transcript_name=CHM13_chrY_T0000864;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000864:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9549578	9549697	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000864;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_T0000864;transcript_name=CHM13_chrY_T0000864;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000864:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9544076	9549679	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000865;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_G0000273;transcript_name=CHM13_chrY_T0000865;gene_name=FAM197Y9;ID=CHM13_chrY_T0000865;Name=FAM197Y9
CHM13_chrY	CAT	exon	9544076	9544135	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000865;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_T0000865;transcript_name=CHM13_chrY_T0000865;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000865:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9544136	9547686	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000865;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_T0000865;transcript_name=CHM13_chrY_T0000865;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000865:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9547687	9547845	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000865;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_T0000865;transcript_name=CHM13_chrY_T0000865;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000865:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9547846	9549345	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000865;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_T0000865;transcript_name=CHM13_chrY_T0000865;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000865:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9549346	9549491	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000865;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_T0000865;transcript_name=CHM13_chrY_T0000865;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000865:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9549492	9549577	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000865;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_T0000865;transcript_name=CHM13_chrY_T0000865;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000865:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9549578	9549679	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000865;gene_id=CHM13_chrY_G0000273;Parent=CHM13_chrY_T0000865;transcript_name=CHM13_chrY_T0000865;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000865:3;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9549346	9551339	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_3;gene_id=CHM13_chrY_G0000274;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000274;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9549346	9551339	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000866;gene_id=CHM13_chrY_G0000274;Parent=CHM13_chrY_G0000274;transcript_name=CHM13_chrY_T0000866;gene_name=FAM197Y9;ID=CHM13_chrY_T0000866;Name=FAM197Y9
CHM13_chrY	CAT	exon	9549346	9549491	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000866;gene_id=CHM13_chrY_G0000274;Parent=CHM13_chrY_T0000866;transcript_name=CHM13_chrY_T0000866;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000866:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9549492	9549603	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000866;gene_id=CHM13_chrY_G0000274;Parent=CHM13_chrY_T0000866;transcript_name=CHM13_chrY_T0000866;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000866:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9549604	9549687	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000866;gene_id=CHM13_chrY_G0000274;Parent=CHM13_chrY_T0000866;transcript_name=CHM13_chrY_T0000866;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000866:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9549688	9551029	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000866;gene_id=CHM13_chrY_G0000274;Parent=CHM13_chrY_T0000866;transcript_name=CHM13_chrY_T0000866;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000866:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9551030	9551339	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000866;gene_id=CHM13_chrY_G0000274;Parent=CHM13_chrY_T0000866;transcript_name=CHM13_chrY_T0000866;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000866:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9552332	9555100	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_2;gene_id=CHM13_chrY_G0000275;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000275;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	9552332	9555100	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_G0000275;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000867;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9552332	9552424	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000867;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000867:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9552425	9552685	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000867;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000867:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9552686	9552823	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000867;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000867:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9552824	9553430	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000867;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000867:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553431	9553508	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000867;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000867:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553509	9553636	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000867;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000867:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553637	9553748	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000867;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000867:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553749	9553849	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000867;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000867:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553850	9553995	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000867;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000867:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553996	9554101	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000867;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000867:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554102	9554183	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000867;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000867:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9554184	9554877	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000867;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000867:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554878	9555100	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000867;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000867;transcript_name=CHM13_chrY_T0000867;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000867:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9552344	9555088	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_G0000275;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000869;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9552344	9552424	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000869;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000869:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9552425	9552685	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000869;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000869:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9552686	9552823	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000869;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000869:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9552824	9553430	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000869;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000869:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553431	9553508	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000869;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000869:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553509	9553636	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000869;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000869:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553637	9553748	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000869;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000869:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553749	9553856	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000869;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000869:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553857	9553995	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000869;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000869:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553996	9554101	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000869;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000869:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554102	9554183	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000869;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000869:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9554184	9554877	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000869;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000869:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554878	9555088	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000869;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000869;transcript_name=CHM13_chrY_T0000869;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000869:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9552353	9555095	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_G0000275;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000870;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9552353	9552424	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000870;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000870:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9552425	9552685	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000870;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000870:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9552686	9552823	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000870;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000870:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9552824	9553430	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000870;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000870:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553431	9553508	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000870;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000870:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553509	9553636	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000870;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000870:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553637	9553748	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000870;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000870:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553749	9553849	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000870;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000870:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553850	9553995	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000870;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000870:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553996	9554090	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000870;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000870:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554091	9554183	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000870;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000870:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9554184	9554877	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000870;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000870:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554878	9555095	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000870;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000870;transcript_name=CHM13_chrY_T0000870;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000870:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9552555	9555093	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000871;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_G0000275;transcript_name=CHM13_chrY_T0000871;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000871;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9552555	9552823	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000871;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000871;transcript_name=CHM13_chrY_T0000871;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000871:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9552824	9553430	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000871;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000871;transcript_name=CHM13_chrY_T0000871;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000871:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553431	9553508	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000871;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000871;transcript_name=CHM13_chrY_T0000871;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000871:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553509	9553636	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000871;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000871;transcript_name=CHM13_chrY_T0000871;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000871:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553637	9553748	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000871;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000871;transcript_name=CHM13_chrY_T0000871;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000871:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553749	9553849	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000871;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000871;transcript_name=CHM13_chrY_T0000871;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000871:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553850	9553995	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000871;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000871;transcript_name=CHM13_chrY_T0000871;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000871:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553996	9554101	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000871;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000871;transcript_name=CHM13_chrY_T0000871;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000871:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554102	9554183	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000871;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000871;transcript_name=CHM13_chrY_T0000871;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000871:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9554184	9554877	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000871;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000871;transcript_name=CHM13_chrY_T0000871;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000871:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554878	9555093	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000871;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000871;transcript_name=CHM13_chrY_T0000871;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000871:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9552651	9555088	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000872;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_G0000275;transcript_name=CHM13_chrY_T0000872;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000872;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9552651	9552823	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000872;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000872;transcript_name=CHM13_chrY_T0000872;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000872:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9552824	9553430	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000872;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000872;transcript_name=CHM13_chrY_T0000872;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000872:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553431	9553508	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000872;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000872;transcript_name=CHM13_chrY_T0000872;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000872:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553509	9553636	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000872;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000872;transcript_name=CHM13_chrY_T0000872;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000872:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553637	9553748	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000872;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000872;transcript_name=CHM13_chrY_T0000872;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000872:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553749	9553856	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000872;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000872;transcript_name=CHM13_chrY_T0000872;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000872:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553857	9553995	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000872;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000872;transcript_name=CHM13_chrY_T0000872;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000872:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553996	9554101	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000872;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000872;transcript_name=CHM13_chrY_T0000872;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000872:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554102	9554183	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000872;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000872;transcript_name=CHM13_chrY_T0000872;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000872:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9554184	9554877	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000872;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000872;transcript_name=CHM13_chrY_T0000872;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000872:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554878	9555088	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000872;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000872;transcript_name=CHM13_chrY_T0000872;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000872:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9552777	9555099	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000873;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_G0000275;transcript_name=CHM13_chrY_T0000873;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000873;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9552777	9552879	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000873;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000873;transcript_name=CHM13_chrY_T0000873;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000873:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9552880	9553448	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000873;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000873;transcript_name=CHM13_chrY_T0000873;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000873:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553449	9553508	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000873;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000873;transcript_name=CHM13_chrY_T0000873;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000873:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553509	9553636	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000873;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000873;transcript_name=CHM13_chrY_T0000873;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000873:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553637	9553748	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000873;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000873;transcript_name=CHM13_chrY_T0000873;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000873:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553749	9553849	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000873;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000873;transcript_name=CHM13_chrY_T0000873;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000873:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553850	9553995	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000873;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000873;transcript_name=CHM13_chrY_T0000873;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000873:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553996	9554101	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000873;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000873;transcript_name=CHM13_chrY_T0000873;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000873:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554102	9554183	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000873;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000873;transcript_name=CHM13_chrY_T0000873;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000873:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9554184	9554877	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000873;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000873;transcript_name=CHM13_chrY_T0000873;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000873:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554878	9555099	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000873;gene_id=CHM13_chrY_G0000275;Parent=CHM13_chrY_T0000873;transcript_name=CHM13_chrY_T0000873;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000873:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9552338	9554900	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_2;gene_id=CHM13_chrY_G0000276;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=CHM13_chrY_G0000276;Name=TSPY6P
CHM13_chrY	CAT	transcript	9552338	9554900	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_G0000276;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=CHM13_chrY_T0000868;Name=TSPY6P
CHM13_chrY	CAT	exon	9552338	9552548	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_T0000868;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000868:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9552549	9552556	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_T0000868;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000868:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9552557	9552823	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_T0000868;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000868:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9552824	9553430	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_T0000868;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000868:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553431	9553508	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_T0000868;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000868:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553509	9553636	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_T0000868;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000868:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553637	9553748	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_T0000868;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000868:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553749	9553849	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_T0000868;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000868:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553850	9553995	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_T0000868;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000868:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553996	9554101	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_T0000868;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000868:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554102	9554183	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_T0000868;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000868:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9554184	9554877	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_T0000868;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000868:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554878	9554900	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000868;gene_id=CHM13_chrY_G0000276;Parent=CHM13_chrY_T0000868;transcript_name=CHM13_chrY_T0000868;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000868:6;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9553478	9555095	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=CHM13_chrY_G0000277;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000277;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	9553478	9555086	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000874;gene_id=CHM13_chrY_G0000277;Parent=CHM13_chrY_G0000277;transcript_name=CHM13_chrY_T0000874;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000874;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9553478	9553508	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000874;gene_id=CHM13_chrY_G0000277;Parent=CHM13_chrY_T0000874;transcript_name=CHM13_chrY_T0000874;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000874:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553509	9553636	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000874;gene_id=CHM13_chrY_G0000277;Parent=CHM13_chrY_T0000874;transcript_name=CHM13_chrY_T0000874;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000874:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9553637	9553995	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000874;gene_id=CHM13_chrY_G0000277;Parent=CHM13_chrY_T0000874;transcript_name=CHM13_chrY_T0000874;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000874:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9553996	9554101	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000874;gene_id=CHM13_chrY_G0000277;Parent=CHM13_chrY_T0000874;transcript_name=CHM13_chrY_T0000874;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000874:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554102	9554183	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000874;gene_id=CHM13_chrY_G0000277;Parent=CHM13_chrY_T0000874;transcript_name=CHM13_chrY_T0000874;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000874:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9554184	9554877	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000874;gene_id=CHM13_chrY_G0000277;Parent=CHM13_chrY_T0000874;transcript_name=CHM13_chrY_T0000874;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000874:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554878	9555086	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000874;gene_id=CHM13_chrY_G0000277;Parent=CHM13_chrY_T0000874;transcript_name=CHM13_chrY_T0000874;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000874:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9554023	9555095	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000875;gene_id=CHM13_chrY_G0000277;Parent=CHM13_chrY_G0000277;transcript_name=CHM13_chrY_T0000875;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000875;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9554023	9554183	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000875;gene_id=CHM13_chrY_G0000277;Parent=CHM13_chrY_T0000875;transcript_name=CHM13_chrY_T0000875;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000875:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9554184	9554877	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000875;gene_id=CHM13_chrY_G0000277;Parent=CHM13_chrY_T0000875;transcript_name=CHM13_chrY_T0000875;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000875:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9554878	9555095	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000875;gene_id=CHM13_chrY_G0000277;Parent=CHM13_chrY_T0000875;transcript_name=CHM13_chrY_T0000875;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000875:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9562321	9569996	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_8;gene_id=CHM13_chrY_G0000278;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000278;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9562321	9569996	1000	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000876;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_G0000278;transcript_name=CHM13_chrY_T0000876;gene_name=FAM197Y9;ID=CHM13_chrY_T0000876;Name=FAM197Y9
CHM13_chrY	CAT	exon	9562321	9564434	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000876;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_T0000876;transcript_name=CHM13_chrY_T0000876;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000876:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9564435	9567983	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000876;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_T0000876;transcript_name=CHM13_chrY_T0000876;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000876:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9567984	9568069	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000876;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_T0000876;transcript_name=CHM13_chrY_T0000876;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000876:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9568070	9569876	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000876;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_T0000876;transcript_name=CHM13_chrY_T0000876;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000876:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9569877	9569996	.	-	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000876;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_T0000876;transcript_name=CHM13_chrY_T0000876;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000876:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9564375	9569978	1000	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000877;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_G0000278;transcript_name=CHM13_chrY_T0000877;gene_name=FAM197Y9;ID=CHM13_chrY_T0000877;Name=FAM197Y9
CHM13_chrY	CAT	exon	9564375	9564434	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000877;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_T0000877;transcript_name=CHM13_chrY_T0000877;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000877:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9564435	9567983	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000877;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_T0000877;transcript_name=CHM13_chrY_T0000877;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000877:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9567984	9568142	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000877;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_T0000877;transcript_name=CHM13_chrY_T0000877;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000877:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9568143	9569644	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000877;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_T0000877;transcript_name=CHM13_chrY_T0000877;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000877:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9569645	9569790	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000877;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_T0000877;transcript_name=CHM13_chrY_T0000877;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000877:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9569791	9569876	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000877;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_T0000877;transcript_name=CHM13_chrY_T0000877;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000877:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9569877	9569978	.	-	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000877;gene_id=CHM13_chrY_G0000278;Parent=CHM13_chrY_T0000877;transcript_name=CHM13_chrY_T0000877;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000877:3;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9569645	9571638	.	-	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_7;gene_id=CHM13_chrY_G0000279;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000279;Name=FAM197Y9
CHM13_chrY	CAT	transcript	9569645	9571638	1000	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000878;gene_id=CHM13_chrY_G0000279;Parent=CHM13_chrY_G0000279;transcript_name=CHM13_chrY_T0000878;gene_name=FAM197Y9;ID=CHM13_chrY_T0000878;Name=FAM197Y9
CHM13_chrY	CAT	exon	9569645	9569790	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000878;gene_id=CHM13_chrY_G0000279;Parent=CHM13_chrY_T0000878;transcript_name=CHM13_chrY_T0000878;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000878:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9569791	9569902	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000878;gene_id=CHM13_chrY_G0000279;Parent=CHM13_chrY_T0000878;transcript_name=CHM13_chrY_T0000878;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000878:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9569903	9569986	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000878;gene_id=CHM13_chrY_G0000279;Parent=CHM13_chrY_T0000878;transcript_name=CHM13_chrY_T0000878;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000878:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9569987	9571328	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000878;gene_id=CHM13_chrY_G0000279;Parent=CHM13_chrY_T0000878;transcript_name=CHM13_chrY_T0000878;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0000878:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9571329	9571638	.	-	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0000878;gene_id=CHM13_chrY_G0000279;Parent=CHM13_chrY_T0000878;transcript_name=CHM13_chrY_T0000878;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0000878:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9572591	9575387	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=CHM13_chrY_G0000280;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=CHM13_chrY_G0000280;Name=TSPY10
CHM13_chrY	CAT	transcript	9572591	9575387	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_G0000280;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=CHM13_chrY_T0000879;Name=TSPY10
CHM13_chrY	CAT	exon	9572591	9573122	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000879:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9572637	9573122	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000879:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9572637	9572639	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=start_codon:CHM13_chrY_T0000879;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9573123	9573729	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000879:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9573730	9573807	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000879:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9573730	9573807	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000879:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9573808	9573935	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000879:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9573936	9574047	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000879:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9573936	9574047	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000879:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9574048	9574148	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000879:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9574149	9574294	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000879:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9574149	9574294	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000879:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9574295	9574400	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000879:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9574401	9574482	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000879:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9574401	9574482	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000879:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9574483	9575176	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000879:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9575177	9575387	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000879:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9575177	9575199	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000879:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9575197	9575199	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000879;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000879;transcript_name=CHM13_chrY_T0000879;gene_name=TSPY10;ID=stop_codon:CHM13_chrY_T0000879;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9572637	9575386	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_G0000280;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=CHM13_chrY_T0000880;Name=TSPY10
CHM13_chrY	CAT	exon	9572637	9573122	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000880:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9572637	9573122	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000880:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9572637	9572639	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=start_codon:CHM13_chrY_T0000880;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9573123	9573729	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000880:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9573730	9573807	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000880:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9573730	9573807	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000880:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9573808	9573935	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000880:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9573936	9574047	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000880:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9573936	9574047	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000880:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9574048	9574148	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000880:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9574149	9574294	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000880:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9574149	9574294	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000880:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9574295	9574389	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000880:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9574390	9574482	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000880:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9574390	9574452	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000880:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9574450	9574452	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=stop_codon:CHM13_chrY_T0000880;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9574483	9575176	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000880:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9575177	9575386	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000880;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000880;transcript_name=CHM13_chrY_T0000880;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000880:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9572637	9575393	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000881;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_G0000280;transcript_name=CHM13_chrY_T0000881;gene_name=TSPY10;ID=CHM13_chrY_T0000881;Name=TSPY10
CHM13_chrY	CAT	exon	9572637	9573122	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000881;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000881;transcript_name=CHM13_chrY_T0000881;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000881:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9573123	9573729	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000881;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000881;transcript_name=CHM13_chrY_T0000881;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000881:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9573730	9573807	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000881;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000881;transcript_name=CHM13_chrY_T0000881;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000881:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9573808	9573935	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000881;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000881;transcript_name=CHM13_chrY_T0000881;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000881:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9573936	9574482	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000881;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000881;transcript_name=CHM13_chrY_T0000881;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000881:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9574483	9574609	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000881;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000881;transcript_name=CHM13_chrY_T0000881;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000881:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9574610	9575393	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000881;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000881;transcript_name=CHM13_chrY_T0000881;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000881:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9573997	9575378	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000882;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_G0000280;transcript_name=CHM13_chrY_T0000882;gene_name=TSPY10;ID=CHM13_chrY_T0000882;Name=TSPY10
CHM13_chrY	CAT	exon	9573997	9574294	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000882;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000882;transcript_name=CHM13_chrY_T0000882;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000882:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9574295	9574400	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000882;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000882;transcript_name=CHM13_chrY_T0000882;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000882:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9574401	9574482	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000882;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000882;transcript_name=CHM13_chrY_T0000882;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000882:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9574483	9575176	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000882;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000882;transcript_name=CHM13_chrY_T0000882;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000882:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9575177	9575378	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000882;gene_id=CHM13_chrY_G0000280;Parent=CHM13_chrY_T0000882;transcript_name=CHM13_chrY_T0000882;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000882:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9584550	9590296	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000281;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000281;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9584550	9590296	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000883;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_G0000281;transcript_name=CHM13_chrY_T0000883;gene_name=FAM197Y5;ID=CHM13_chrY_T0000883;Name=FAM197Y5
CHM13_chrY	CAT	exon	9584550	9584739	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000883;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_T0000883;transcript_name=CHM13_chrY_T0000883;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000883:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9584740	9588289	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000883;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_T0000883;transcript_name=CHM13_chrY_T0000883;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000883:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9588290	9588375	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000883;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_T0000883;transcript_name=CHM13_chrY_T0000883;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000883:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9588376	9590182	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000883;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_T0000883;transcript_name=CHM13_chrY_T0000883;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000883:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9590183	9590296	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000883;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_T0000883;transcript_name=CHM13_chrY_T0000883;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000883:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9584680	9590284	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000884;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_G0000281;transcript_name=CHM13_chrY_T0000884;gene_name=FAM197Y5;ID=CHM13_chrY_T0000884;Name=FAM197Y5
CHM13_chrY	CAT	exon	9584680	9584739	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000884;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_T0000884;transcript_name=CHM13_chrY_T0000884;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000884:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9584740	9588289	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000884;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_T0000884;transcript_name=CHM13_chrY_T0000884;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000884:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9588290	9588448	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000884;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_T0000884;transcript_name=CHM13_chrY_T0000884;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000884:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9588449	9589950	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000884;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_T0000884;transcript_name=CHM13_chrY_T0000884;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000884:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9589951	9590096	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000884;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_T0000884;transcript_name=CHM13_chrY_T0000884;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000884:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9590097	9590182	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000884;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_T0000884;transcript_name=CHM13_chrY_T0000884;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000884:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9590183	9590284	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000884;gene_id=CHM13_chrY_G0000281;Parent=CHM13_chrY_T0000884;transcript_name=CHM13_chrY_T0000884;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000884:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9589951	9591943	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_15;gene_id=CHM13_chrY_G0000282;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000282;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9589951	9591943	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000885;gene_id=CHM13_chrY_G0000282;Parent=CHM13_chrY_G0000282;transcript_name=CHM13_chrY_T0000885;gene_name=FAM197Y5;ID=CHM13_chrY_T0000885;Name=FAM197Y5
CHM13_chrY	CAT	exon	9589951	9590096	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000885;gene_id=CHM13_chrY_G0000282;Parent=CHM13_chrY_T0000885;transcript_name=CHM13_chrY_T0000885;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000885:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9590097	9591632	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000885;gene_id=CHM13_chrY_G0000282;Parent=CHM13_chrY_T0000885;transcript_name=CHM13_chrY_T0000885;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000885:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9591633	9591943	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000885;gene_id=CHM13_chrY_G0000282;Parent=CHM13_chrY_T0000885;transcript_name=CHM13_chrY_T0000885;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000885:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9592897	9595711	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=CHM13_chrY_G0000283;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=CHM13_chrY_G0000283;Name=TSPY4
CHM13_chrY	CAT	transcript	9592897	9595711	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_G0000283;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=CHM13_chrY_T0000886;Name=TSPY4
CHM13_chrY	CAT	exon	9592897	9593446	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000886:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9592943	9593446	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000886:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9592943	9592945	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000886;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9593447	9594053	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000886:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594054	9594131	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000886:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9594054	9594131	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000886:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594132	9594259	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000886:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594260	9594371	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000886:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9594260	9594371	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000886:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594372	9594472	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000886:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594473	9594618	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000886:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9594473	9594618	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000886:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594619	9594724	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000886:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594725	9594806	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000886:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9594725	9594806	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000886:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594807	9595500	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000886:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9595501	9595711	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000886:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9595501	9595523	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000886:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9595521	9595523	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000886;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000886;transcript_name=CHM13_chrY_T0000886;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000886;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9592897	9595590	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_G0000283;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=CHM13_chrY_T0000887;Name=TSPY4
CHM13_chrY	CAT	exon	9592897	9593029	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000887:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9592943	9593029	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000887:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9592943	9592945	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000887;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9593030	9593308	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000887:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9593309	9593446	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000887:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9593309	9593446	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000887:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9593447	9594053	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000887:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594054	9594131	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000887:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9594054	9594131	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000887:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594132	9594259	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000887:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594260	9594371	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000887:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9594260	9594371	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000887:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594372	9594472	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000887:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594473	9594618	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000887:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9594473	9594618	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000887:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594619	9594724	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000887:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594725	9594806	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000887:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9594725	9594806	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000887:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594807	9595500	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000887:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9595501	9595590	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000887:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9595501	9595523	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000887:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9595521	9595523	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000887;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000887;transcript_name=CHM13_chrY_T0000887;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000887;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9592943	9595710	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_G0000283;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=CHM13_chrY_T0000888;Name=TSPY4
CHM13_chrY	CAT	exon	9592943	9593446	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000888:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9592943	9593446	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000888:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9592943	9592945	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000888;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9593447	9594053	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000888:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594054	9594131	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000888:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9594054	9594131	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000888:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594132	9594259	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000888:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594260	9594371	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000888:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9594260	9594371	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000888:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594372	9594472	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000888:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594473	9594618	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000888:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9594473	9594618	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000888:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594619	9594713	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000888:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594714	9594806	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000888:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9594714	9594776	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000888:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9594774	9594776	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000888;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594807	9595500	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000888:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9595501	9595710	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000888;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000888;transcript_name=CHM13_chrY_T0000888;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000888:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9592943	9595717	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000889;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_G0000283;transcript_name=CHM13_chrY_T0000889;gene_name=TSPY4;ID=CHM13_chrY_T0000889;Name=TSPY4
CHM13_chrY	CAT	exon	9592943	9593446	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000889;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000889;transcript_name=CHM13_chrY_T0000889;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000889:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9593447	9594053	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000889;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000889;transcript_name=CHM13_chrY_T0000889;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000889:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594054	9594131	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000889;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000889;transcript_name=CHM13_chrY_T0000889;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000889:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594132	9594259	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000889;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000889;transcript_name=CHM13_chrY_T0000889;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000889:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594260	9594806	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000889;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000889;transcript_name=CHM13_chrY_T0000889;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000889:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594807	9594933	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000889;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000889;transcript_name=CHM13_chrY_T0000889;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000889:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594934	9595717	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000889;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000889;transcript_name=CHM13_chrY_T0000889;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000889:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9594321	9595702	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000890;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_G0000283;transcript_name=CHM13_chrY_T0000890;gene_name=TSPY4;ID=CHM13_chrY_T0000890;Name=TSPY4
CHM13_chrY	CAT	exon	9594321	9594618	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000890;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000890;transcript_name=CHM13_chrY_T0000890;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000890:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594619	9594713	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000890;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000890;transcript_name=CHM13_chrY_T0000890;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000890:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9594714	9594806	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000890;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000890;transcript_name=CHM13_chrY_T0000890;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000890:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9594807	9595500	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000890;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000890;transcript_name=CHM13_chrY_T0000890;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000890:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9595501	9595702	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000890;gene_id=CHM13_chrY_G0000283;Parent=CHM13_chrY_T0000890;transcript_name=CHM13_chrY_T0000890;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000890:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9602913	9610811	.	-	.	source_gene_common_name=FAM197Y6;source_gene=ENSG00000237802.7_1;gene_id=CHM13_chrY_G0000284;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=CHM13_chrY_G0000284;Name=FAM197Y6
CHM13_chrY	CAT	transcript	9602913	9610811	1000	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000891;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_G0000284;transcript_name=CHM13_chrY_T0000891;gene_name=FAM197Y6;ID=CHM13_chrY_T0000891;Name=FAM197Y6
CHM13_chrY	CAT	exon	9602913	9605040	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000891;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000891;transcript_name=CHM13_chrY_T0000891;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000891:0;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9605041	9608595	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000891;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000891;transcript_name=CHM13_chrY_T0000891;gene_name=FAM197Y6;ID=intron:CHM13_chrY_T0000891:0;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9608596	9608681	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000891;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000891;transcript_name=CHM13_chrY_T0000891;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000891:1;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9608682	9610490	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000891;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000891;transcript_name=CHM13_chrY_T0000891;gene_name=FAM197Y6;ID=intron:CHM13_chrY_T0000891:1;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9610491	9610600	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000891;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000891;transcript_name=CHM13_chrY_T0000891;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000891:2;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9610601	9610796	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000891;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000891;transcript_name=CHM13_chrY_T0000891;gene_name=FAM197Y6;ID=intron:CHM13_chrY_T0000891:2;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9610797	9610811	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000891;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000891;transcript_name=CHM13_chrY_T0000891;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000891:3;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9604981	9610592	1000	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000892;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_G0000284;transcript_name=CHM13_chrY_T0000892;gene_name=FAM197Y6;ID=CHM13_chrY_T0000892;Name=FAM197Y6
CHM13_chrY	CAT	exon	9604981	9605040	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000892;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000892;transcript_name=CHM13_chrY_T0000892;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000892:0;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9605041	9608595	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000892;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000892;transcript_name=CHM13_chrY_T0000892;gene_name=FAM197Y6;ID=intron:CHM13_chrY_T0000892:0;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9608596	9608754	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000892;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000892;transcript_name=CHM13_chrY_T0000892;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000892:1;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9608755	9610258	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000892;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000892;transcript_name=CHM13_chrY_T0000892;gene_name=FAM197Y6;ID=intron:CHM13_chrY_T0000892:1;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9610259	9610404	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000892;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000892;transcript_name=CHM13_chrY_T0000892;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000892:2;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9610405	9610490	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000892;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000892;transcript_name=CHM13_chrY_T0000892;gene_name=FAM197Y6;ID=intron:CHM13_chrY_T0000892:2;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9610491	9610592	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000892;gene_id=CHM13_chrY_G0000284;Parent=CHM13_chrY_T0000892;transcript_name=CHM13_chrY_T0000892;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000892:3;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9610259	9612251	.	-	.	source_gene_common_name=ENSG00000286173;source_gene=ENSG00000286173.1;gene_id=CHM13_chrY_G0000285;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286173;gene_sources=liftoff;ID=CHM13_chrY_G0000285;Name=ENSG00000286173
CHM13_chrY	CAT	transcript	9610259	9612251	1000	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=CHM13_chrY_T0000893;gene_id=CHM13_chrY_G0000285;Parent=CHM13_chrY_G0000285;transcript_name=CHM13_chrY_T0000893;gene_name=ENSG00000286173;ID=CHM13_chrY_T0000893;Name=ENSG00000286173
CHM13_chrY	CAT	exon	9610259	9610404	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=CHM13_chrY_T0000893;gene_id=CHM13_chrY_G0000285;Parent=CHM13_chrY_T0000893;transcript_name=CHM13_chrY_T0000893;gene_name=ENSG00000286173;ID=exon:CHM13_chrY_T0000893:0;Name=ENSG00000286173;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9610405	9611940	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=CHM13_chrY_T0000893;gene_id=CHM13_chrY_G0000285;Parent=CHM13_chrY_T0000893;transcript_name=CHM13_chrY_T0000893;gene_name=ENSG00000286173;ID=intron:CHM13_chrY_T0000893:0;Name=ENSG00000286173;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9611941	9612251	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=CHM13_chrY_T0000893;gene_id=CHM13_chrY_G0000285;Parent=CHM13_chrY_T0000893;transcript_name=CHM13_chrY_T0000893;gene_name=ENSG00000286173;ID=exon:CHM13_chrY_T0000893:1;Name=ENSG00000286173;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9613205	9616002	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=CHM13_chrY_G0000286;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=CHM13_chrY_G0000286;Name=TSPY3
CHM13_chrY	CAT	transcript	9613205	9616002	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_G0000286;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=CHM13_chrY_T0000894;Name=TSPY3
CHM13_chrY	CAT	exon	9613205	9613736	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000894:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9613251	9613736	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000894:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9613251	9613253	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000894;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9613737	9614343	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000894:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9614344	9614421	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000894:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9614344	9614421	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000894:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9614422	9614549	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000894:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9614550	9614661	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000894:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9614550	9614661	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000894:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9614662	9614762	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000894:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9614763	9614908	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000894:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9614763	9614908	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000894:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9614909	9615014	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000894:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9615015	9615096	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000894:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9615015	9615096	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000894:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9615097	9615790	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000894:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9615791	9616002	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000894:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9615791	9615813	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000894:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9615811	9615813	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000894;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000894;transcript_name=CHM13_chrY_T0000894;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000894;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9613251	9616001	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_G0000286;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=CHM13_chrY_T0000895;Name=TSPY3
CHM13_chrY	CAT	exon	9613251	9613736	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000895:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9613251	9613736	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000895:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9613251	9613253	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000895;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9613737	9614343	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000895:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9614344	9614421	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000895:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9614344	9614421	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000895:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9614422	9614549	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000895:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9614550	9614661	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000895:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9614550	9614661	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000895:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9614662	9614762	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000895:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9614763	9614908	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000895:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9614763	9614908	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000895:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9614909	9615003	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000895:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9615004	9615096	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000895:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9615004	9615066	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000895:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9615064	9615066	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000895;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9615097	9615790	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000895:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9615791	9616001	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000895;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000895;transcript_name=CHM13_chrY_T0000895;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000895:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9613251	9615813	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_G0000286;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=CHM13_chrY_T0000896;Name=TSPY3
CHM13_chrY	CAT	exon	9613251	9613337	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000896:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9613251	9613337	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000896:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9613251	9613253	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000896;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9613338	9613598	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000896:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9613599	9613736	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000896:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9613599	9613736	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000896:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9613737	9614343	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000896:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9614344	9614421	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000896:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9614344	9614421	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000896:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9614422	9614549	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000896:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9614550	9614661	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000896:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9614550	9614661	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000896:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9614662	9614762	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000896:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9614763	9614908	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000896:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9614763	9614908	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000896:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9614909	9615014	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000896:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9615015	9615096	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000896:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9615015	9615096	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000896:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9615097	9615790	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000896:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9615791	9615813	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000896:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9615791	9615813	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000896:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9615811	9615813	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000896;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000896;transcript_name=CHM13_chrY_T0000896;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000896;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9613251	9616008	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000897;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_G0000286;transcript_name=CHM13_chrY_T0000897;gene_name=TSPY3;ID=CHM13_chrY_T0000897;Name=TSPY3
CHM13_chrY	CAT	exon	9613251	9613736	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000897;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000897;transcript_name=CHM13_chrY_T0000897;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000897:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9613737	9614343	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000897;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000897;transcript_name=CHM13_chrY_T0000897;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000897:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9614344	9614421	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000897;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000897;transcript_name=CHM13_chrY_T0000897;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000897:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9614422	9614549	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000897;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000897;transcript_name=CHM13_chrY_T0000897;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000897:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9614550	9615096	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000897;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000897;transcript_name=CHM13_chrY_T0000897;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000897:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9615097	9615223	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000897;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000897;transcript_name=CHM13_chrY_T0000897;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000897:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9615224	9616008	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000897;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000897;transcript_name=CHM13_chrY_T0000897;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000897:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9614611	9615993	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000898;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_G0000286;transcript_name=CHM13_chrY_T0000898;gene_name=TSPY3;ID=CHM13_chrY_T0000898;Name=TSPY3
CHM13_chrY	CAT	exon	9614611	9614908	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000898;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000898;transcript_name=CHM13_chrY_T0000898;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000898:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9614909	9615003	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000898;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000898;transcript_name=CHM13_chrY_T0000898;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000898:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9615004	9615096	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000898;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000898;transcript_name=CHM13_chrY_T0000898;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000898:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9615097	9615790	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000898;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000898;transcript_name=CHM13_chrY_T0000898;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000898:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9615791	9615993	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000898;gene_id=CHM13_chrY_G0000286;Parent=CHM13_chrY_T0000898;transcript_name=CHM13_chrY_T0000898;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000898:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9623235	9631128	.	-	.	source_gene_common_name=FAM197Y6;source_gene=ENSG00000237802.7;gene_id=CHM13_chrY_G0000287;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=CHM13_chrY_G0000287;Name=FAM197Y6
CHM13_chrY	CAT	transcript	9623235	9631128	1000	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000899;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_G0000287;transcript_name=CHM13_chrY_T0000899;gene_name=FAM197Y6;ID=CHM13_chrY_T0000899;Name=FAM197Y6
CHM13_chrY	CAT	exon	9623235	9625363	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000899;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000899;transcript_name=CHM13_chrY_T0000899;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000899:0;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9625364	9628914	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000899;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000899;transcript_name=CHM13_chrY_T0000899;gene_name=FAM197Y6;ID=intron:CHM13_chrY_T0000899:0;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9628915	9629000	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000899;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000899;transcript_name=CHM13_chrY_T0000899;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000899:1;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9629001	9630807	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000899;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000899;transcript_name=CHM13_chrY_T0000899;gene_name=FAM197Y6;ID=intron:CHM13_chrY_T0000899:1;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9630808	9630917	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000899;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000899;transcript_name=CHM13_chrY_T0000899;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000899:2;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9630918	9631113	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000899;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000899;transcript_name=CHM13_chrY_T0000899;gene_name=FAM197Y6;ID=intron:CHM13_chrY_T0000899:2;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9631114	9631128	.	-	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000899;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000899;transcript_name=CHM13_chrY_T0000899;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000899:3;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9625304	9630909	1000	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000900;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_G0000287;transcript_name=CHM13_chrY_T0000900;gene_name=FAM197Y6;ID=CHM13_chrY_T0000900;Name=FAM197Y6
CHM13_chrY	CAT	exon	9625304	9625363	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000900;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000900;transcript_name=CHM13_chrY_T0000900;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000900:0;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9625364	9628914	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000900;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000900;transcript_name=CHM13_chrY_T0000900;gene_name=FAM197Y6;ID=intron:CHM13_chrY_T0000900:0;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9628915	9629073	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000900;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000900;transcript_name=CHM13_chrY_T0000900;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000900:1;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9629074	9630575	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000900;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000900;transcript_name=CHM13_chrY_T0000900;gene_name=FAM197Y6;ID=intron:CHM13_chrY_T0000900:1;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9630576	9630721	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000900;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000900;transcript_name=CHM13_chrY_T0000900;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000900:2;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9630722	9630807	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000900;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000900;transcript_name=CHM13_chrY_T0000900;gene_name=FAM197Y6;ID=intron:CHM13_chrY_T0000900:2;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9630808	9630909	.	-	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=CHM13_chrY_T0000900;gene_id=CHM13_chrY_G0000287;Parent=CHM13_chrY_T0000900;transcript_name=CHM13_chrY_T0000900;gene_name=FAM197Y6;ID=exon:CHM13_chrY_T0000900:3;Name=FAM197Y6;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9630576	9632568	.	-	.	source_gene_common_name=ENSG00000286173;source_gene=ENSG00000286173.1;gene_id=CHM13_chrY_G0000288;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286173;gene_sources=liftoff;ID=CHM13_chrY_G0000288;Name=ENSG00000286173
CHM13_chrY	CAT	transcript	9630576	9632568	1000	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=CHM13_chrY_T0000901;gene_id=CHM13_chrY_G0000288;Parent=CHM13_chrY_G0000288;transcript_name=CHM13_chrY_T0000901;gene_name=ENSG00000286173;ID=CHM13_chrY_T0000901;Name=ENSG00000286173
CHM13_chrY	CAT	exon	9630576	9630721	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=CHM13_chrY_T0000901;gene_id=CHM13_chrY_G0000288;Parent=CHM13_chrY_T0000901;transcript_name=CHM13_chrY_T0000901;gene_name=ENSG00000286173;ID=exon:CHM13_chrY_T0000901:0;Name=ENSG00000286173;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9630722	9632257	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=CHM13_chrY_T0000901;gene_id=CHM13_chrY_G0000288;Parent=CHM13_chrY_T0000901;transcript_name=CHM13_chrY_T0000901;gene_name=ENSG00000286173;ID=intron:CHM13_chrY_T0000901:0;Name=ENSG00000286173;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9632258	9632568	.	-	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=CHM13_chrY_T0000901;gene_id=CHM13_chrY_G0000288;Parent=CHM13_chrY_T0000901;transcript_name=CHM13_chrY_T0000901;gene_name=ENSG00000286173;ID=exon:CHM13_chrY_T0000901:1;Name=ENSG00000286173;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9633523	9636319	.	+	.	source_gene_common_name=TSPY1;source_gene=ENSG00000258992.7;gene_id=CHM13_chrY_G0000289;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=CHM13_chrY_G0000289;Name=TSPY1
CHM13_chrY	CAT	transcript	9633523	9636318	100	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_G0000289;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=CHM13_chrY_T0000902;Name=TSPY1
CHM13_chrY	CAT	exon	9633523	9634054	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=exon:CHM13_chrY_T0000902:0;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9633569	9634054	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=CDS:CHM13_chrY_T0000902:0;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9633569	9633571	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=start_codon:CHM13_chrY_T0000902;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9634055	9634661	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=intron:CHM13_chrY_T0000902:0;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9634662	9634739	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=exon:CHM13_chrY_T0000902:1;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9634662	9634739	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=CDS:CHM13_chrY_T0000902:1;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9634740	9634867	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=intron:CHM13_chrY_T0000902:1;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9634868	9634979	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=exon:CHM13_chrY_T0000902:2;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9634868	9634979	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=CDS:CHM13_chrY_T0000902:2;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9634980	9635080	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=intron:CHM13_chrY_T0000902:2;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9635081	9635226	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=exon:CHM13_chrY_T0000902:3;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9635081	9635226	.	+	2	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=CDS:CHM13_chrY_T0000902:3;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9635227	9635321	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=intron:CHM13_chrY_T0000902:3;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9635322	9635414	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=exon:CHM13_chrY_T0000902:4;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9635322	9635384	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=CDS:CHM13_chrY_T0000902:4;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9635382	9635384	.	+	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=stop_codon:CHM13_chrY_T0000902;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9635415	9636108	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=intron:CHM13_chrY_T0000902:4;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9636109	9636318	.	+	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000902;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000902;transcript_name=CHM13_chrY_T0000902;gene_name=TSPY1;ID=exon:CHM13_chrY_T0000902:5;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9633523	9636319	100	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_G0000289;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=CHM13_chrY_T0000903;Name=TSPY1
CHM13_chrY	CAT	exon	9633523	9634054	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=exon:CHM13_chrY_T0000903:0;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9633569	9634054	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=CDS:CHM13_chrY_T0000903:0;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9633569	9633571	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=start_codon:CHM13_chrY_T0000903;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9634055	9634661	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=intron:CHM13_chrY_T0000903:0;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9634662	9634739	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=exon:CHM13_chrY_T0000903:1;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9634662	9634739	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=CDS:CHM13_chrY_T0000903:1;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9634740	9634867	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=intron:CHM13_chrY_T0000903:1;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9634868	9634979	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=exon:CHM13_chrY_T0000903:2;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9634868	9634979	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=CDS:CHM13_chrY_T0000903:2;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9634980	9635080	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=intron:CHM13_chrY_T0000903:2;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9635081	9635226	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=exon:CHM13_chrY_T0000903:3;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9635081	9635226	.	+	2	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=CDS:CHM13_chrY_T0000903:3;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9635227	9635332	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=intron:CHM13_chrY_T0000903:3;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9635333	9635414	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=exon:CHM13_chrY_T0000903:4;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9635333	9635414	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=CDS:CHM13_chrY_T0000903:4;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9635415	9636108	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=intron:CHM13_chrY_T0000903:4;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9636109	9636319	.	+	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=exon:CHM13_chrY_T0000903:5;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9636109	9636131	.	+	2	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=CDS:CHM13_chrY_T0000903:5;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9636129	9636131	.	+	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=CHM13_chrY_T0000903;gene_id=CHM13_chrY_G0000289;Parent=CHM13_chrY_T0000903;transcript_name=CHM13_chrY_T0000903;gene_name=TSPY1;ID=stop_codon:CHM13_chrY_T0000903;Name=TSPY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9645608	9651209	.	-	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000290373.1;gene_id=CHM13_chrY_G0000290;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=CHM13_chrY_G0000290;Name=FAM197Y4
CHM13_chrY	CAT	transcript	9645608	9651209	1000	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=CHM13_chrY_T0000904;gene_id=CHM13_chrY_G0000290;Parent=CHM13_chrY_G0000290;transcript_name=CHM13_chrY_T0000904;gene_name=FAM197Y4;ID=CHM13_chrY_T0000904;Name=FAM197Y4
CHM13_chrY	CAT	exon	9645608	9645667	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=CHM13_chrY_T0000904;gene_id=CHM13_chrY_G0000290;Parent=CHM13_chrY_T0000904;transcript_name=CHM13_chrY_T0000904;gene_name=FAM197Y4;ID=exon:CHM13_chrY_T0000904:0;Name=FAM197Y4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9645668	9649216	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=CHM13_chrY_T0000904;gene_id=CHM13_chrY_G0000290;Parent=CHM13_chrY_T0000904;transcript_name=CHM13_chrY_T0000904;gene_name=FAM197Y4;ID=intron:CHM13_chrY_T0000904:0;Name=FAM197Y4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9649217	9649375	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=CHM13_chrY_T0000904;gene_id=CHM13_chrY_G0000290;Parent=CHM13_chrY_T0000904;transcript_name=CHM13_chrY_T0000904;gene_name=FAM197Y4;ID=exon:CHM13_chrY_T0000904:1;Name=FAM197Y4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9649376	9650875	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=CHM13_chrY_T0000904;gene_id=CHM13_chrY_G0000290;Parent=CHM13_chrY_T0000904;transcript_name=CHM13_chrY_T0000904;gene_name=FAM197Y4;ID=intron:CHM13_chrY_T0000904:1;Name=FAM197Y4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9650876	9651021	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=CHM13_chrY_T0000904;gene_id=CHM13_chrY_G0000290;Parent=CHM13_chrY_T0000904;transcript_name=CHM13_chrY_T0000904;gene_name=FAM197Y4;ID=exon:CHM13_chrY_T0000904:2;Name=FAM197Y4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9651022	9651107	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=CHM13_chrY_T0000904;gene_id=CHM13_chrY_G0000290;Parent=CHM13_chrY_T0000904;transcript_name=CHM13_chrY_T0000904;gene_name=FAM197Y4;ID=intron:CHM13_chrY_T0000904:2;Name=FAM197Y4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9651108	9651209	.	-	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=CHM13_chrY_T0000904;gene_id=CHM13_chrY_G0000290;Parent=CHM13_chrY_T0000904;transcript_name=CHM13_chrY_T0000904;gene_name=FAM197Y4;ID=exon:CHM13_chrY_T0000904:3;Name=FAM197Y4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9650876	9652868	.	-	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000274196.6;gene_id=CHM13_chrY_G0000291;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y4;gene_sources=liftoff;ID=CHM13_chrY_G0000291;Name=FAM197Y4
CHM13_chrY	CAT	transcript	9650876	9652868	1000	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=CHM13_chrY_T0000905;gene_id=CHM13_chrY_G0000291;Parent=CHM13_chrY_G0000291;transcript_name=CHM13_chrY_T0000905;gene_name=FAM197Y4;ID=CHM13_chrY_T0000905;Name=FAM197Y4
CHM13_chrY	CAT	exon	9650876	9651021	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=CHM13_chrY_T0000905;gene_id=CHM13_chrY_G0000291;Parent=CHM13_chrY_T0000905;transcript_name=CHM13_chrY_T0000905;gene_name=FAM197Y4;ID=exon:CHM13_chrY_T0000905:0;Name=FAM197Y4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9651022	9652557	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=CHM13_chrY_T0000905;gene_id=CHM13_chrY_G0000291;Parent=CHM13_chrY_T0000905;transcript_name=CHM13_chrY_T0000905;gene_name=FAM197Y4;ID=intron:CHM13_chrY_T0000905:0;Name=FAM197Y4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9652558	9652868	.	-	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=CHM13_chrY_T0000905;gene_id=CHM13_chrY_G0000291;Parent=CHM13_chrY_T0000905;transcript_name=CHM13_chrY_T0000905;gene_name=FAM197Y4;ID=exon:CHM13_chrY_T0000905:1;Name=FAM197Y4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9653822	9656636	.	+	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=CHM13_chrY_G0000292;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=CHM13_chrY_G0000292;Name=TSPY4
CHM13_chrY	CAT	transcript	9653822	9656636	100	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_G0000292;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=CHM13_chrY_T0000906;Name=TSPY4
CHM13_chrY	CAT	exon	9653822	9654371	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000906:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9653868	9654371	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000906:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9653868	9653870	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000906;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9654372	9654978	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000906:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9654979	9655056	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000906:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9654979	9655056	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000906:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655057	9655184	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000906:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9655185	9655296	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000906:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9655185	9655296	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000906:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655297	9655397	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000906:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9655398	9655543	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000906:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9655398	9655543	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000906:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655544	9655649	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000906:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9655650	9655731	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000906:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9655650	9655731	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000906:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655732	9656425	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000906:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9656426	9656636	.	+	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000906:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9656426	9656448	.	+	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000906:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9656446	9656448	.	+	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000906;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000906;transcript_name=CHM13_chrY_T0000906;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000906;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9653822	9656515	100	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_G0000292;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=CHM13_chrY_T0000907;Name=TSPY4
CHM13_chrY	CAT	exon	9653822	9653954	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000907:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9653868	9653954	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000907:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9653868	9653870	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000907;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9653955	9654233	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000907:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9654234	9654371	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000907:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9654234	9654371	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000907:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9654372	9654978	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000907:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9654979	9655056	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000907:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9654979	9655056	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000907:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655057	9655184	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000907:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9655185	9655296	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000907:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9655185	9655296	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000907:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655297	9655397	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000907:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9655398	9655543	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000907:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9655398	9655543	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000907:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655544	9655649	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000907:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9655650	9655731	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000907:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9655650	9655731	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000907:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655732	9656425	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000907:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9656426	9656515	.	+	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000907:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9656426	9656448	.	+	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000907:6;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9656446	9656448	.	+	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000907;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000907;transcript_name=CHM13_chrY_T0000907;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000907;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9653868	9656635	100	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_G0000292;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=CHM13_chrY_T0000908;Name=TSPY4
CHM13_chrY	CAT	exon	9653868	9654371	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000908:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9653868	9654371	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000908:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9653868	9653870	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=start_codon:CHM13_chrY_T0000908;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9654372	9654978	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000908:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9654979	9655056	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000908:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9654979	9655056	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000908:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655057	9655184	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000908:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9655185	9655296	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000908:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9655185	9655296	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000908:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655297	9655397	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000908:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9655398	9655543	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000908:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9655398	9655543	.	+	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000908:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655544	9655638	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000908:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9655639	9655731	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000908:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9655639	9655701	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=CDS:CHM13_chrY_T0000908:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9655699	9655701	.	+	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=stop_codon:CHM13_chrY_T0000908;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655732	9656425	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000908:4;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9656426	9656635	.	+	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000908;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000908;transcript_name=CHM13_chrY_T0000908;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000908:5;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9653868	9656642	1000	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000909;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_G0000292;transcript_name=CHM13_chrY_T0000909;gene_name=TSPY4;ID=CHM13_chrY_T0000909;Name=TSPY4
CHM13_chrY	CAT	exon	9653868	9654371	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000909;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000909;transcript_name=CHM13_chrY_T0000909;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000909:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9654372	9654978	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000909;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000909;transcript_name=CHM13_chrY_T0000909;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000909:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9654979	9655056	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000909;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000909;transcript_name=CHM13_chrY_T0000909;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000909:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655057	9655184	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000909;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000909;transcript_name=CHM13_chrY_T0000909;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000909:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9655185	9655731	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000909;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000909;transcript_name=CHM13_chrY_T0000909;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000909:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655732	9655858	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000909;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000909;transcript_name=CHM13_chrY_T0000909;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000909:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9655859	9656642	.	+	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000909;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000909;transcript_name=CHM13_chrY_T0000909;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000909:3;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9655246	9656627	1000	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000910;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_G0000292;transcript_name=CHM13_chrY_T0000910;gene_name=TSPY4;ID=CHM13_chrY_T0000910;Name=TSPY4
CHM13_chrY	CAT	exon	9655246	9655543	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000910;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000910;transcript_name=CHM13_chrY_T0000910;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000910:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655544	9655638	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000910;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000910;transcript_name=CHM13_chrY_T0000910;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000910:0;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9655639	9655731	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000910;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000910;transcript_name=CHM13_chrY_T0000910;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000910:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9655732	9656425	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000910;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000910;transcript_name=CHM13_chrY_T0000910;gene_name=TSPY4;ID=intron:CHM13_chrY_T0000910:1;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9656426	9656627	.	+	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=CHM13_chrY_T0000910;gene_id=CHM13_chrY_G0000292;Parent=CHM13_chrY_T0000910;transcript_name=CHM13_chrY_T0000910;gene_name=TSPY4;ID=exon:CHM13_chrY_T0000910:2;Name=TSPY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9663865	9671742	.	-	.	source_gene_common_name=ENSG00000290332;source_gene=ENSG00000290332.1_1;gene_id=CHM13_chrY_G0000293;gene_biotype=lncRNA;gene_name=ENSG00000290332;gene_sources=liftoff;ID=CHM13_chrY_G0000293;Name=ENSG00000290332
CHM13_chrY	CAT	transcript	9663865	9671742	1000	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000911;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_G0000293;transcript_name=CHM13_chrY_T0000911;gene_name=ENSG00000290332;ID=CHM13_chrY_T0000911;Name=ENSG00000290332
CHM13_chrY	CAT	exon	9663865	9665978	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000911;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000911;transcript_name=CHM13_chrY_T0000911;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000911:0;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9665979	9669532	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000911;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000911;transcript_name=CHM13_chrY_T0000911;gene_name=ENSG00000290332;ID=intron:CHM13_chrY_T0000911:0;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9669533	9669618	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000911;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000911;transcript_name=CHM13_chrY_T0000911;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000911:1;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9669619	9671421	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000911;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000911;transcript_name=CHM13_chrY_T0000911;gene_name=ENSG00000290332;ID=intron:CHM13_chrY_T0000911:1;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9671422	9671531	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000911;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000911;transcript_name=CHM13_chrY_T0000911;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000911:2;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9671532	9671727	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000911;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000911;transcript_name=CHM13_chrY_T0000911;gene_name=ENSG00000290332;ID=intron:CHM13_chrY_T0000911:2;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9671728	9671742	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000911;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000911;transcript_name=CHM13_chrY_T0000911;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000911:3;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9665919	9671523	1000	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000912;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_G0000293;transcript_name=CHM13_chrY_T0000912;gene_name=ENSG00000290332;ID=CHM13_chrY_T0000912;Name=ENSG00000290332
CHM13_chrY	CAT	exon	9665919	9665978	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000912;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000912;transcript_name=CHM13_chrY_T0000912;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000912:0;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9665979	9669532	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000912;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000912;transcript_name=CHM13_chrY_T0000912;gene_name=ENSG00000290332;ID=intron:CHM13_chrY_T0000912:0;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9669533	9669691	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000912;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000912;transcript_name=CHM13_chrY_T0000912;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000912:1;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9669692	9671189	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000912;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000912;transcript_name=CHM13_chrY_T0000912;gene_name=ENSG00000290332;ID=intron:CHM13_chrY_T0000912:1;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9671190	9671335	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000912;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000912;transcript_name=CHM13_chrY_T0000912;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000912:2;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9671336	9671421	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000912;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000912;transcript_name=CHM13_chrY_T0000912;gene_name=ENSG00000290332;ID=intron:CHM13_chrY_T0000912:2;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9671422	9671523	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000912;gene_id=CHM13_chrY_G0000293;Parent=CHM13_chrY_T0000912;transcript_name=CHM13_chrY_T0000912;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000912:3;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9671190	9673182	.	-	.	source_gene_common_name=FAM197Y2;source_gene=ENSG00000234803.9;gene_id=CHM13_chrY_G0000294;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y2;gene_sources=liftoff;ID=CHM13_chrY_G0000294;Name=FAM197Y2
CHM13_chrY	CAT	transcript	9671190	9673182	1000	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=CHM13_chrY_T0000913;gene_id=CHM13_chrY_G0000294;Parent=CHM13_chrY_G0000294;transcript_name=CHM13_chrY_T0000913;gene_name=FAM197Y2;ID=CHM13_chrY_T0000913;Name=FAM197Y2
CHM13_chrY	CAT	exon	9671190	9671335	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=CHM13_chrY_T0000913;gene_id=CHM13_chrY_G0000294;Parent=CHM13_chrY_T0000913;transcript_name=CHM13_chrY_T0000913;gene_name=FAM197Y2;ID=exon:CHM13_chrY_T0000913:0;Name=FAM197Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9671336	9672871	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=CHM13_chrY_T0000913;gene_id=CHM13_chrY_G0000294;Parent=CHM13_chrY_T0000913;transcript_name=CHM13_chrY_T0000913;gene_name=FAM197Y2;ID=intron:CHM13_chrY_T0000913:0;Name=FAM197Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9672872	9673182	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=CHM13_chrY_T0000913;gene_id=CHM13_chrY_G0000294;Parent=CHM13_chrY_T0000913;transcript_name=CHM13_chrY_T0000913;gene_name=FAM197Y2;ID=exon:CHM13_chrY_T0000913:1;Name=FAM197Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9674136	9676950	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=CHM13_chrY_G0000295;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=CHM13_chrY_G0000295;Name=TSPY9
CHM13_chrY	CAT	transcript	9674136	9676950	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_G0000295;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=CHM13_chrY_T0000914;Name=TSPY9
CHM13_chrY	CAT	exon	9674136	9674685	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000914:0;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9674182	9674685	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000914:0;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9674686	9675292	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000914:0;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9675293	9675370	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000914:1;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9675293	9675370	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000914:1;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9675371	9675498	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000914:1;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9675499	9675610	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000914:2;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9675499	9675610	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000914:2;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9675611	9675711	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000914:2;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9675712	9675857	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000914:3;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9675712	9675857	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000914:3;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9675858	9675963	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000914:3;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9675964	9676045	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000914:4;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9675964	9676045	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000914:4;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9676046	9676739	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000914:4;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9676740	9676950	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000914:5;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9676740	9676762	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000914:5;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9676760	9676762	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000914;gene_id=CHM13_chrY_G0000295;Parent=CHM13_chrY_T0000914;transcript_name=CHM13_chrY_T0000914;gene_name=TSPY9;ID=stop_codon:CHM13_chrY_T0000914;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9684153	9692044	.	-	.	source_gene_common_name=ENSG00000290332;source_gene=ENSG00000290332.1;gene_id=CHM13_chrY_G0000296;gene_biotype=lncRNA;gene_name=ENSG00000290332;gene_sources=liftoff;ID=CHM13_chrY_G0000296;Name=ENSG00000290332
CHM13_chrY	CAT	transcript	9684153	9692044	1000	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000915;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_G0000296;transcript_name=CHM13_chrY_T0000915;gene_name=ENSG00000290332;ID=CHM13_chrY_T0000915;Name=ENSG00000290332
CHM13_chrY	CAT	exon	9684153	9686279	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000915;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000915;transcript_name=CHM13_chrY_T0000915;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000915:0;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9686280	9689830	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000915;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000915;transcript_name=CHM13_chrY_T0000915;gene_name=ENSG00000290332;ID=intron:CHM13_chrY_T0000915:0;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9689831	9689916	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000915;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000915;transcript_name=CHM13_chrY_T0000915;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000915:1;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9689917	9691723	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000915;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000915;transcript_name=CHM13_chrY_T0000915;gene_name=ENSG00000290332;ID=intron:CHM13_chrY_T0000915:1;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9691724	9691833	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000915;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000915;transcript_name=CHM13_chrY_T0000915;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000915:2;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9691834	9692029	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000915;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000915;transcript_name=CHM13_chrY_T0000915;gene_name=ENSG00000290332;ID=intron:CHM13_chrY_T0000915:2;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9692030	9692044	.	-	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000915;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000915;transcript_name=CHM13_chrY_T0000915;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000915:3;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9686220	9691825	1000	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000916;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_G0000296;transcript_name=CHM13_chrY_T0000916;gene_name=ENSG00000290332;ID=CHM13_chrY_T0000916;Name=ENSG00000290332
CHM13_chrY	CAT	exon	9686220	9686279	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000916;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000916;transcript_name=CHM13_chrY_T0000916;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000916:0;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9686280	9689830	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000916;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000916;transcript_name=CHM13_chrY_T0000916;gene_name=ENSG00000290332;ID=intron:CHM13_chrY_T0000916:0;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9689831	9689989	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000916;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000916;transcript_name=CHM13_chrY_T0000916;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000916:1;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9689990	9691491	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000916;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000916;transcript_name=CHM13_chrY_T0000916;gene_name=ENSG00000290332;ID=intron:CHM13_chrY_T0000916:1;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9691492	9691637	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000916;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000916;transcript_name=CHM13_chrY_T0000916;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000916:2;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9691638	9691723	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000916;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000916;transcript_name=CHM13_chrY_T0000916;gene_name=ENSG00000290332;ID=intron:CHM13_chrY_T0000916:2;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9691724	9691825	.	-	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=CHM13_chrY_T0000916;gene_id=CHM13_chrY_G0000296;Parent=CHM13_chrY_T0000916;transcript_name=CHM13_chrY_T0000916;gene_name=ENSG00000290332;ID=exon:CHM13_chrY_T0000916:3;Name=ENSG00000290332;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9691492	9693484	.	-	.	source_gene_common_name=FAM197Y2;source_gene=ENSG00000234803.9;gene_id=CHM13_chrY_G0000297;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y2;gene_sources=liftoff;ID=CHM13_chrY_G0000297;Name=FAM197Y2
CHM13_chrY	CAT	transcript	9691492	9693484	1000	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=CHM13_chrY_T0000917;gene_id=CHM13_chrY_G0000297;Parent=CHM13_chrY_G0000297;transcript_name=CHM13_chrY_T0000917;gene_name=FAM197Y2;ID=CHM13_chrY_T0000917;Name=FAM197Y2
CHM13_chrY	CAT	exon	9691492	9691637	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=CHM13_chrY_T0000917;gene_id=CHM13_chrY_G0000297;Parent=CHM13_chrY_T0000917;transcript_name=CHM13_chrY_T0000917;gene_name=FAM197Y2;ID=exon:CHM13_chrY_T0000917:0;Name=FAM197Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9691638	9693173	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=CHM13_chrY_T0000917;gene_id=CHM13_chrY_G0000297;Parent=CHM13_chrY_T0000917;transcript_name=CHM13_chrY_T0000917;gene_name=FAM197Y2;ID=intron:CHM13_chrY_T0000917:0;Name=FAM197Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9693174	9693484	.	-	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=CHM13_chrY_T0000917;gene_id=CHM13_chrY_G0000297;Parent=CHM13_chrY_T0000917;transcript_name=CHM13_chrY_T0000917;gene_name=FAM197Y2;ID=exon:CHM13_chrY_T0000917:1;Name=FAM197Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9694474	9697242	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=CHM13_chrY_G0000298;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000298;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	9694474	9697242	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_G0000298;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000918;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9694474	9694566	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000918;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000918:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9694567	9694827	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000918;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000918:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9694828	9694965	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000918;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000918:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9694966	9695572	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000918;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000918:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695573	9695650	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000918;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000918:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695651	9695778	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000918;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000918:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695779	9695890	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000918;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000918:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695891	9695991	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000918;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000918:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695992	9696137	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000918;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000918:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696138	9696243	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000918;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000918:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9696244	9696325	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000918;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000918:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696326	9697019	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000918;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000918:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9697020	9697242	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000918;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000918;transcript_name=CHM13_chrY_T0000918;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000918:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9694486	9697230	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_G0000298;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000920;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9694486	9694566	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000920;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000920:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9694567	9694827	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000920;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000920:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9694828	9694965	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000920;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000920:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9694966	9695572	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000920;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000920:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695573	9695650	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000920;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000920:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695651	9695778	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000920;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000920:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695779	9695890	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000920;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000920:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695891	9695998	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000920;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000920:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695999	9696137	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000920;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000920:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696138	9696243	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000920;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000920:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9696244	9696325	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000920;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000920:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696326	9697019	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000920;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000920:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9697020	9697230	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000920;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000920;transcript_name=CHM13_chrY_T0000920;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000920:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9694495	9697237	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_G0000298;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000921;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9694495	9694566	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000921;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000921:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9694567	9694827	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000921;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000921:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9694828	9694965	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000921;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000921:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9694966	9695572	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000921;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000921:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695573	9695650	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000921;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000921:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695651	9695778	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000921;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000921:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695779	9695890	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000921;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000921:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695891	9695991	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000921;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000921:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695992	9696137	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000921;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000921:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696138	9696232	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000921;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000921:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9696233	9696325	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000921;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000921:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696326	9697019	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000921;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000921:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9697020	9697237	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000921;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000921;transcript_name=CHM13_chrY_T0000921;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000921:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9694697	9697235	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000922;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_G0000298;transcript_name=CHM13_chrY_T0000922;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000922;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9694697	9694965	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000922;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000922;transcript_name=CHM13_chrY_T0000922;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000922:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9694966	9695572	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000922;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000922;transcript_name=CHM13_chrY_T0000922;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000922:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695573	9695650	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000922;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000922;transcript_name=CHM13_chrY_T0000922;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000922:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695651	9695778	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000922;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000922;transcript_name=CHM13_chrY_T0000922;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000922:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695779	9695890	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000922;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000922;transcript_name=CHM13_chrY_T0000922;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000922:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695891	9695991	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000922;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000922;transcript_name=CHM13_chrY_T0000922;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000922:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695992	9696137	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000922;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000922;transcript_name=CHM13_chrY_T0000922;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000922:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696138	9696243	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000922;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000922;transcript_name=CHM13_chrY_T0000922;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000922:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9696244	9696325	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000922;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000922;transcript_name=CHM13_chrY_T0000922;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000922:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696326	9697019	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000922;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000922;transcript_name=CHM13_chrY_T0000922;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000922:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9697020	9697235	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000922;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000922;transcript_name=CHM13_chrY_T0000922;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000922:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9694793	9697230	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000923;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_G0000298;transcript_name=CHM13_chrY_T0000923;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000923;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9694793	9694965	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000923;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000923;transcript_name=CHM13_chrY_T0000923;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000923:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9694966	9695572	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000923;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000923;transcript_name=CHM13_chrY_T0000923;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000923:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695573	9695650	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000923;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000923;transcript_name=CHM13_chrY_T0000923;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000923:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695651	9695778	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000923;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000923;transcript_name=CHM13_chrY_T0000923;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000923:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695779	9695890	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000923;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000923;transcript_name=CHM13_chrY_T0000923;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000923:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695891	9695998	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000923;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000923;transcript_name=CHM13_chrY_T0000923;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000923:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695999	9696137	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000923;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000923;transcript_name=CHM13_chrY_T0000923;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000923:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696138	9696243	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000923;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000923;transcript_name=CHM13_chrY_T0000923;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000923:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9696244	9696325	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000923;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000923;transcript_name=CHM13_chrY_T0000923;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000923:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696326	9697019	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000923;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000923;transcript_name=CHM13_chrY_T0000923;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000923:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9697020	9697230	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000923;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000923;transcript_name=CHM13_chrY_T0000923;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000923:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9694919	9697241	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000924;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_G0000298;transcript_name=CHM13_chrY_T0000924;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000924;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9694919	9695021	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000924;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000924;transcript_name=CHM13_chrY_T0000924;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000924:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695022	9695590	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000924;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000924;transcript_name=CHM13_chrY_T0000924;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000924:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695591	9695650	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000924;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000924;transcript_name=CHM13_chrY_T0000924;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000924:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695651	9695778	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000924;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000924;transcript_name=CHM13_chrY_T0000924;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000924:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695779	9695890	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000924;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000924;transcript_name=CHM13_chrY_T0000924;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000924:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695891	9695991	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000924;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000924;transcript_name=CHM13_chrY_T0000924;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000924:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695992	9696137	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000924;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000924;transcript_name=CHM13_chrY_T0000924;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000924:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696138	9696243	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000924;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000924;transcript_name=CHM13_chrY_T0000924;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000924:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9696244	9696325	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000924;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000924;transcript_name=CHM13_chrY_T0000924;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000924:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696326	9697019	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000924;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000924;transcript_name=CHM13_chrY_T0000924;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000924:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9697020	9697241	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000924;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000924;transcript_name=CHM13_chrY_T0000924;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000924:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9695620	9697228	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000925;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_G0000298;transcript_name=CHM13_chrY_T0000925;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000925;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9695620	9695650	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000925;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000925;transcript_name=CHM13_chrY_T0000925;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000925:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695651	9695778	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000925;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000925;transcript_name=CHM13_chrY_T0000925;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000925:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695779	9696137	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000925;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000925;transcript_name=CHM13_chrY_T0000925;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000925:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696138	9696243	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000925;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000925;transcript_name=CHM13_chrY_T0000925;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000925:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9696244	9696325	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000925;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000925;transcript_name=CHM13_chrY_T0000925;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000925:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696326	9697019	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000925;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000925;transcript_name=CHM13_chrY_T0000925;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000925:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9697020	9697228	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000925;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000925;transcript_name=CHM13_chrY_T0000925;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000925:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9696165	9697237	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000926;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_G0000298;transcript_name=CHM13_chrY_T0000926;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000926;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9696165	9696325	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000926;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000926;transcript_name=CHM13_chrY_T0000926;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000926:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696326	9697019	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000926;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000926;transcript_name=CHM13_chrY_T0000926;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000926:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9697020	9697237	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000926;gene_id=CHM13_chrY_G0000298;Parent=CHM13_chrY_T0000926;transcript_name=CHM13_chrY_T0000926;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000926:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9694480	9697042	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_3;gene_id=CHM13_chrY_G0000299;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=CHM13_chrY_G0000299;Name=TSPY6P
CHM13_chrY	CAT	transcript	9694480	9697042	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_G0000299;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=CHM13_chrY_T0000919;Name=TSPY6P
CHM13_chrY	CAT	exon	9694480	9694690	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_T0000919;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000919:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9694691	9694698	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_T0000919;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000919:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9694699	9694965	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_T0000919;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000919:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9694966	9695572	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_T0000919;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000919:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695573	9695650	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_T0000919;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000919:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695651	9695778	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_T0000919;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000919:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695779	9695890	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_T0000919;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000919:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9695891	9695991	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_T0000919;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000919:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9695992	9696137	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_T0000919;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000919:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696138	9696243	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_T0000919;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000919:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9696244	9696325	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_T0000919;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000919:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9696326	9697019	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_T0000919;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000919:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9697020	9697042	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000919;gene_id=CHM13_chrY_G0000299;Parent=CHM13_chrY_T0000919;transcript_name=CHM13_chrY_T0000919;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000919:6;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9706374	9712120	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000300;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000300;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9706374	9712120	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000927;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_G0000300;transcript_name=CHM13_chrY_T0000927;gene_name=FAM197Y5;ID=CHM13_chrY_T0000927;Name=FAM197Y5
CHM13_chrY	CAT	exon	9706374	9706563	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000927;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_T0000927;transcript_name=CHM13_chrY_T0000927;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000927:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9706564	9710113	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000927;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_T0000927;transcript_name=CHM13_chrY_T0000927;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000927:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9710114	9710199	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000927;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_T0000927;transcript_name=CHM13_chrY_T0000927;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000927:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9710200	9712006	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000927;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_T0000927;transcript_name=CHM13_chrY_T0000927;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000927:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9712007	9712120	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000927;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_T0000927;transcript_name=CHM13_chrY_T0000927;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000927:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9706504	9712108	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000928;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_G0000300;transcript_name=CHM13_chrY_T0000928;gene_name=FAM197Y5;ID=CHM13_chrY_T0000928;Name=FAM197Y5
CHM13_chrY	CAT	exon	9706504	9706563	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000928;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_T0000928;transcript_name=CHM13_chrY_T0000928;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000928:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9706564	9710113	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000928;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_T0000928;transcript_name=CHM13_chrY_T0000928;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000928:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9710114	9710272	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000928;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_T0000928;transcript_name=CHM13_chrY_T0000928;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000928:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9710273	9711774	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000928;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_T0000928;transcript_name=CHM13_chrY_T0000928;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000928:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9711775	9711920	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000928;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_T0000928;transcript_name=CHM13_chrY_T0000928;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000928:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9711921	9712006	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000928;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_T0000928;transcript_name=CHM13_chrY_T0000928;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000928:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9712007	9712108	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000928;gene_id=CHM13_chrY_G0000300;Parent=CHM13_chrY_T0000928;transcript_name=CHM13_chrY_T0000928;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000928:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9711775	9713767	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_19;gene_id=CHM13_chrY_G0000301;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000301;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9711775	9713767	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_19;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_19;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000929;gene_id=CHM13_chrY_G0000301;Parent=CHM13_chrY_G0000301;transcript_name=CHM13_chrY_T0000929;gene_name=FAM197Y5;ID=CHM13_chrY_T0000929;Name=FAM197Y5
CHM13_chrY	CAT	exon	9711775	9711920	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_19;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_19;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000929;gene_id=CHM13_chrY_G0000301;Parent=CHM13_chrY_T0000929;transcript_name=CHM13_chrY_T0000929;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000929:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9711921	9713456	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_19;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_19;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000929;gene_id=CHM13_chrY_G0000301;Parent=CHM13_chrY_T0000929;transcript_name=CHM13_chrY_T0000929;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000929:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9713457	9713767	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_19;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_19;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000929;gene_id=CHM13_chrY_G0000301;Parent=CHM13_chrY_T0000929;transcript_name=CHM13_chrY_T0000929;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000929:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9714761	9717530	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_3;gene_id=CHM13_chrY_G0000302;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000302;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	9714761	9717530	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_G0000302;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000930;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9714761	9714853	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000930;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000930:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9714854	9715114	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000930;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000930:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9715115	9715252	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000930;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000930:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715253	9715859	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000930;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000930:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9715860	9715937	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000930;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000930:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715938	9716065	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000930;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000930:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716066	9716177	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000930;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000930:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716178	9716278	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000930;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000930:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716279	9716424	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000930;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000930:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716425	9716530	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000930;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000930:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716531	9716612	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000930;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000930:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716613	9717306	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000930;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000930:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9717307	9717530	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000930;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000930;transcript_name=CHM13_chrY_T0000930;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000930:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9714773	9717518	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_G0000302;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000932;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9714773	9714853	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000932;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000932:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9714854	9715114	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000932;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000932:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9715115	9715252	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000932;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000932:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715253	9715859	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000932;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000932:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9715860	9715937	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000932;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000932:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715938	9716065	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000932;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000932:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716066	9716177	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000932;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000932:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716178	9716285	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000932;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000932:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716286	9716424	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000932;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000932:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716425	9716530	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000932;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000932:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716531	9716612	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000932;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000932:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716613	9717306	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000932;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000932:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9717307	9717518	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000932;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000932;transcript_name=CHM13_chrY_T0000932;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000932:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9714782	9717525	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_G0000302;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000933;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9714782	9714853	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000933;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000933:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9714854	9715114	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000933;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000933:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9715115	9715252	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000933;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000933:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715253	9715859	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000933;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000933:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9715860	9715937	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000933;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000933:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715938	9716065	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000933;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000933:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716066	9716177	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000933;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000933:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716178	9716278	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000933;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000933:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716279	9716424	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000933;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000933:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716425	9716519	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000933;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000933:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716520	9716612	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000933;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000933:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716613	9717306	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000933;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000933:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9717307	9717525	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000933;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000933;transcript_name=CHM13_chrY_T0000933;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000933:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9714984	9717523	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000934;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_G0000302;transcript_name=CHM13_chrY_T0000934;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000934;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9714984	9715252	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000934;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000934;transcript_name=CHM13_chrY_T0000934;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000934:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715253	9715859	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000934;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000934;transcript_name=CHM13_chrY_T0000934;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000934:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9715860	9715937	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000934;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000934;transcript_name=CHM13_chrY_T0000934;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000934:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715938	9716065	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000934;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000934;transcript_name=CHM13_chrY_T0000934;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000934:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716066	9716177	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000934;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000934;transcript_name=CHM13_chrY_T0000934;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000934:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716178	9716278	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000934;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000934;transcript_name=CHM13_chrY_T0000934;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000934:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716279	9716424	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000934;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000934;transcript_name=CHM13_chrY_T0000934;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000934:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716425	9716530	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000934;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000934;transcript_name=CHM13_chrY_T0000934;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000934:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716531	9716612	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000934;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000934;transcript_name=CHM13_chrY_T0000934;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000934:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716613	9717306	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000934;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000934;transcript_name=CHM13_chrY_T0000934;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000934:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9717307	9717523	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000934;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000934;transcript_name=CHM13_chrY_T0000934;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000934:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9715080	9717518	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000935;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_G0000302;transcript_name=CHM13_chrY_T0000935;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000935;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9715080	9715252	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000935;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000935;transcript_name=CHM13_chrY_T0000935;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000935:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715253	9715859	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000935;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000935;transcript_name=CHM13_chrY_T0000935;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000935:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9715860	9715937	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000935;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000935;transcript_name=CHM13_chrY_T0000935;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000935:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715938	9716065	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000935;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000935;transcript_name=CHM13_chrY_T0000935;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000935:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716066	9716177	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000935;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000935;transcript_name=CHM13_chrY_T0000935;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000935:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716178	9716285	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000935;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000935;transcript_name=CHM13_chrY_T0000935;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000935:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716286	9716424	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000935;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000935;transcript_name=CHM13_chrY_T0000935;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000935:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716425	9716530	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000935;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000935;transcript_name=CHM13_chrY_T0000935;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000935:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716531	9716612	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000935;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000935;transcript_name=CHM13_chrY_T0000935;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000935:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716613	9717306	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000935;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000935;transcript_name=CHM13_chrY_T0000935;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000935:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9717307	9717518	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000935;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000935;transcript_name=CHM13_chrY_T0000935;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000935:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9715206	9717529	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000936;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_G0000302;transcript_name=CHM13_chrY_T0000936;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000936;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9715206	9715308	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000936;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000936;transcript_name=CHM13_chrY_T0000936;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000936:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715309	9715877	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000936;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000936;transcript_name=CHM13_chrY_T0000936;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000936:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9715878	9715937	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000936;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000936;transcript_name=CHM13_chrY_T0000936;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000936:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715938	9716065	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000936;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000936;transcript_name=CHM13_chrY_T0000936;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000936:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716066	9716177	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000936;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000936;transcript_name=CHM13_chrY_T0000936;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000936:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716178	9716278	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000936;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000936;transcript_name=CHM13_chrY_T0000936;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000936:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716279	9716424	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000936;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000936;transcript_name=CHM13_chrY_T0000936;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000936:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716425	9716530	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000936;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000936;transcript_name=CHM13_chrY_T0000936;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000936:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716531	9716612	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000936;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000936;transcript_name=CHM13_chrY_T0000936;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000936:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716613	9717306	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000936;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000936;transcript_name=CHM13_chrY_T0000936;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000936:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9717307	9717529	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000936;gene_id=CHM13_chrY_G0000302;Parent=CHM13_chrY_T0000936;transcript_name=CHM13_chrY_T0000936;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000936:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9714767	9717329	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_1;gene_id=CHM13_chrY_G0000303;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=CHM13_chrY_G0000303;Name=TSPY6P
CHM13_chrY	CAT	transcript	9714767	9717329	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_G0000303;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=CHM13_chrY_T0000931;Name=TSPY6P
CHM13_chrY	CAT	exon	9714767	9714977	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_T0000931;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000931:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9714978	9714985	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_T0000931;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000931:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9714986	9715252	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_T0000931;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000931:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715253	9715859	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_T0000931;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000931:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9715860	9715937	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_T0000931;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000931:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715938	9716065	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_T0000931;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000931:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716066	9716177	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_T0000931;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000931:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716178	9716278	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_T0000931;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000931:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716279	9716424	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_T0000931;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000931:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716425	9716530	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_T0000931;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000931:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716531	9716612	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_T0000931;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000931:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716613	9717306	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_T0000931;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000931:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9717307	9717329	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000931;gene_id=CHM13_chrY_G0000303;Parent=CHM13_chrY_T0000931;transcript_name=CHM13_chrY_T0000931;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000931:6;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9715907	9717525	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=CHM13_chrY_G0000304;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000304;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	9715907	9717516	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000937;gene_id=CHM13_chrY_G0000304;Parent=CHM13_chrY_G0000304;transcript_name=CHM13_chrY_T0000937;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000937;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9715907	9715937	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000937;gene_id=CHM13_chrY_G0000304;Parent=CHM13_chrY_T0000937;transcript_name=CHM13_chrY_T0000937;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000937:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9715938	9716065	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000937;gene_id=CHM13_chrY_G0000304;Parent=CHM13_chrY_T0000937;transcript_name=CHM13_chrY_T0000937;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000937:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716066	9716424	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000937;gene_id=CHM13_chrY_G0000304;Parent=CHM13_chrY_T0000937;transcript_name=CHM13_chrY_T0000937;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000937:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716425	9716530	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000937;gene_id=CHM13_chrY_G0000304;Parent=CHM13_chrY_T0000937;transcript_name=CHM13_chrY_T0000937;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000937:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9716531	9716612	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000937;gene_id=CHM13_chrY_G0000304;Parent=CHM13_chrY_T0000937;transcript_name=CHM13_chrY_T0000937;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000937:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716613	9717306	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000937;gene_id=CHM13_chrY_G0000304;Parent=CHM13_chrY_T0000937;transcript_name=CHM13_chrY_T0000937;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000937:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9717307	9717516	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000937;gene_id=CHM13_chrY_G0000304;Parent=CHM13_chrY_T0000937;transcript_name=CHM13_chrY_T0000937;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000937:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9716452	9717525	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000938;gene_id=CHM13_chrY_G0000304;Parent=CHM13_chrY_G0000304;transcript_name=CHM13_chrY_T0000938;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000938;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9716452	9716612	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000938;gene_id=CHM13_chrY_G0000304;Parent=CHM13_chrY_T0000938;transcript_name=CHM13_chrY_T0000938;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000938:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9716613	9717306	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000938;gene_id=CHM13_chrY_G0000304;Parent=CHM13_chrY_T0000938;transcript_name=CHM13_chrY_T0000938;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000938:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9717307	9717525	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000938;gene_id=CHM13_chrY_G0000304;Parent=CHM13_chrY_T0000938;transcript_name=CHM13_chrY_T0000938;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000938:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9726682	9732417	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000305;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000305;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9726682	9732417	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000939;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_G0000305;transcript_name=CHM13_chrY_T0000939;gene_name=FAM197Y5;ID=CHM13_chrY_T0000939;Name=FAM197Y5
CHM13_chrY	CAT	exon	9726682	9726871	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000939;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_T0000939;transcript_name=CHM13_chrY_T0000939;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000939:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9726872	9730418	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000939;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_T0000939;transcript_name=CHM13_chrY_T0000939;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000939:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9730419	9730504	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000939;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_T0000939;transcript_name=CHM13_chrY_T0000939;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000939:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9730505	9732303	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000939;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_T0000939;transcript_name=CHM13_chrY_T0000939;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000939:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9732304	9732417	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000939;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_T0000939;transcript_name=CHM13_chrY_T0000939;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000939:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9726812	9732405	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000940;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_G0000305;transcript_name=CHM13_chrY_T0000940;gene_name=FAM197Y5;ID=CHM13_chrY_T0000940;Name=FAM197Y5
CHM13_chrY	CAT	exon	9726812	9726871	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000940;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_T0000940;transcript_name=CHM13_chrY_T0000940;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000940:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9726872	9730418	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000940;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_T0000940;transcript_name=CHM13_chrY_T0000940;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000940:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9730419	9730577	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000940;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_T0000940;transcript_name=CHM13_chrY_T0000940;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000940:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9730578	9732071	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000940;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_T0000940;transcript_name=CHM13_chrY_T0000940;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000940:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9732072	9732217	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000940;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_T0000940;transcript_name=CHM13_chrY_T0000940;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000940:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9732218	9732303	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000940;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_T0000940;transcript_name=CHM13_chrY_T0000940;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000940:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9732304	9732405	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000940;gene_id=CHM13_chrY_G0000305;Parent=CHM13_chrY_T0000940;transcript_name=CHM13_chrY_T0000940;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000940:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9732072	9734064	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_20;gene_id=CHM13_chrY_G0000306;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000306;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9732072	9734064	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_20;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_20;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000941;gene_id=CHM13_chrY_G0000306;Parent=CHM13_chrY_G0000306;transcript_name=CHM13_chrY_T0000941;gene_name=FAM197Y5;ID=CHM13_chrY_T0000941;Name=FAM197Y5
CHM13_chrY	CAT	exon	9732072	9732217	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_20;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_20;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000941;gene_id=CHM13_chrY_G0000306;Parent=CHM13_chrY_T0000941;transcript_name=CHM13_chrY_T0000941;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000941:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9732218	9733753	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_20;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_20;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000941;gene_id=CHM13_chrY_G0000306;Parent=CHM13_chrY_T0000941;transcript_name=CHM13_chrY_T0000941;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000941:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9733754	9734064	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_20;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_20;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000941;gene_id=CHM13_chrY_G0000306;Parent=CHM13_chrY_T0000941;transcript_name=CHM13_chrY_T0000941;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000941:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9735022	9737827	.	+	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1;gene_id=CHM13_chrY_G0000307;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=CHM13_chrY_G0000307;Name=ENSG00000301844
CHM13_chrY	CAT	transcript	9735022	9737827	1000	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000942;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_G0000307;transcript_name=CHM13_chrY_T0000942;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000942;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9735022	9735550	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000942;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000942;transcript_name=CHM13_chrY_T0000942;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000942:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9735551	9736157	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000942;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000942;transcript_name=CHM13_chrY_T0000942;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000942:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736158	9736235	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000942;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000942;transcript_name=CHM13_chrY_T0000942;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000942:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736236	9736363	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000942;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000942;transcript_name=CHM13_chrY_T0000942;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000942:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736364	9736475	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000942;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000942;transcript_name=CHM13_chrY_T0000942;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000942:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736476	9736576	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000942;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000942;transcript_name=CHM13_chrY_T0000942;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000942:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736577	9736722	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000942;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000942;transcript_name=CHM13_chrY_T0000942;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000942:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736723	9736828	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000942;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000942;transcript_name=CHM13_chrY_T0000942;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000942:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736829	9736910	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000942;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000942;transcript_name=CHM13_chrY_T0000942;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000942:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736911	9737604	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000942;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000942;transcript_name=CHM13_chrY_T0000942;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000942:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9737605	9737827	.	+	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000942;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000942;transcript_name=CHM13_chrY_T0000942;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000942:5;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9735031	9737822	1000	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000943;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_G0000307;transcript_name=CHM13_chrY_T0000943;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000943;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9735031	9735550	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000943;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000943;transcript_name=CHM13_chrY_T0000943;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000943:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9735551	9736157	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000943;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000943;transcript_name=CHM13_chrY_T0000943;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000943:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736158	9736235	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000943;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000943;transcript_name=CHM13_chrY_T0000943;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000943:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736236	9736363	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000943;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000943;transcript_name=CHM13_chrY_T0000943;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000943:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736364	9736475	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000943;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000943;transcript_name=CHM13_chrY_T0000943;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000943:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736476	9736583	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000943;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000943;transcript_name=CHM13_chrY_T0000943;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000943:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736584	9736722	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000943;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000943;transcript_name=CHM13_chrY_T0000943;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000943:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736723	9736828	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000943;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000943;transcript_name=CHM13_chrY_T0000943;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000943:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736829	9736910	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000943;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000943;transcript_name=CHM13_chrY_T0000943;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000943:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736911	9737604	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000943;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000943;transcript_name=CHM13_chrY_T0000943;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000943:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9737605	9737822	.	+	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000943;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000943;transcript_name=CHM13_chrY_T0000943;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000943:5;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9735053	9737817	1000	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000944;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_G0000307;transcript_name=CHM13_chrY_T0000944;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000944;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9735053	9735550	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000944;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000944;transcript_name=CHM13_chrY_T0000944;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000944:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9735551	9736157	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000944;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000944;transcript_name=CHM13_chrY_T0000944;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000944:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736158	9736235	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000944;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000944;transcript_name=CHM13_chrY_T0000944;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000944:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736236	9736363	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000944;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000944;transcript_name=CHM13_chrY_T0000944;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000944:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736364	9736475	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000944;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000944;transcript_name=CHM13_chrY_T0000944;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000944:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736476	9736576	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000944;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000944;transcript_name=CHM13_chrY_T0000944;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000944:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736577	9736910	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000944;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000944;transcript_name=CHM13_chrY_T0000944;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000944:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736911	9737604	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000944;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000944;transcript_name=CHM13_chrY_T0000944;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000944:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9737605	9737817	.	+	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000944;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000944;transcript_name=CHM13_chrY_T0000944;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000944:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9735063	9737822	1000	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000945;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_G0000307;transcript_name=CHM13_chrY_T0000945;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000945;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9735063	9735550	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000945;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000945;transcript_name=CHM13_chrY_T0000945;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000945:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9735551	9736157	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000945;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000945;transcript_name=CHM13_chrY_T0000945;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000945:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736158	9736235	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000945;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000945;transcript_name=CHM13_chrY_T0000945;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000945:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736236	9736363	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000945;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000945;transcript_name=CHM13_chrY_T0000945;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000945:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736364	9736722	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000945;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000945;transcript_name=CHM13_chrY_T0000945;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000945:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736723	9736828	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000945;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000945;transcript_name=CHM13_chrY_T0000945;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000945:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736829	9736910	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000945;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000945;transcript_name=CHM13_chrY_T0000945;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000945:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736911	9737604	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000945;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000945;transcript_name=CHM13_chrY_T0000945;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000945:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9737605	9737822	.	+	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000945;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000945;transcript_name=CHM13_chrY_T0000945;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000945:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9735065	9737822	1000	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000946;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_G0000307;transcript_name=CHM13_chrY_T0000946;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000946;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9735065	9735550	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000946;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000946;transcript_name=CHM13_chrY_T0000946;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000946:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9735551	9736157	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000946;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000946;transcript_name=CHM13_chrY_T0000946;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000946:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736158	9736235	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000946;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000946;transcript_name=CHM13_chrY_T0000946;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000946:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736236	9736363	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000946;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000946;transcript_name=CHM13_chrY_T0000946;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000946:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736364	9736475	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000946;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000946;transcript_name=CHM13_chrY_T0000946;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000946:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736476	9736576	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000946;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000946;transcript_name=CHM13_chrY_T0000946;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000946:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736577	9736722	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000946;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000946;transcript_name=CHM13_chrY_T0000946;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000946:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736723	9736817	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000946;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000946;transcript_name=CHM13_chrY_T0000946;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000946:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736818	9736910	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000946;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000946;transcript_name=CHM13_chrY_T0000946;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000946:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736911	9737604	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000946;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000946;transcript_name=CHM13_chrY_T0000946;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000946:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9737605	9737822	.	+	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000946;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000946;transcript_name=CHM13_chrY_T0000946;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000946:5;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9735065	9737815	1000	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000947;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_G0000307;transcript_name=CHM13_chrY_T0000947;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000947;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9735065	9735550	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000947;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000947;transcript_name=CHM13_chrY_T0000947;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000947:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9735551	9736157	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000947;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000947;transcript_name=CHM13_chrY_T0000947;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000947:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736158	9736235	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000947;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000947;transcript_name=CHM13_chrY_T0000947;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000947:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736236	9736363	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000947;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000947;transcript_name=CHM13_chrY_T0000947;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000947:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736364	9736910	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000947;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000947;transcript_name=CHM13_chrY_T0000947;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000947:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736911	9737604	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000947;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000947;transcript_name=CHM13_chrY_T0000947;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000947:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9737605	9737815	.	+	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000947;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000947;transcript_name=CHM13_chrY_T0000947;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000947:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9735085	9737822	1000	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000949;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_G0000307;transcript_name=CHM13_chrY_T0000949;gene_name=ENSG00000301844;ID=CHM13_chrY_T0000949;Name=ENSG00000301844
CHM13_chrY	CAT	exon	9735085	9735550	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000949;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000949;transcript_name=CHM13_chrY_T0000949;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000949:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9735551	9736157	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000949;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000949;transcript_name=CHM13_chrY_T0000949;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000949:0;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736158	9736235	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000949;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000949;transcript_name=CHM13_chrY_T0000949;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000949:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736236	9736363	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000949;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000949;transcript_name=CHM13_chrY_T0000949;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000949:1;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736364	9736722	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000949;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000949;transcript_name=CHM13_chrY_T0000949;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000949:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736723	9736817	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000949;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000949;transcript_name=CHM13_chrY_T0000949;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000949:2;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736818	9736910	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000949;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000949;transcript_name=CHM13_chrY_T0000949;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000949:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736911	9737604	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000949;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000949;transcript_name=CHM13_chrY_T0000949;gene_name=ENSG00000301844;ID=intron:CHM13_chrY_T0000949:3;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9737605	9737822	.	+	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=CHM13_chrY_T0000949;gene_id=CHM13_chrY_G0000307;Parent=CHM13_chrY_T0000949;transcript_name=CHM13_chrY_T0000949;gene_name=ENSG00000301844;ID=exon:CHM13_chrY_T0000949:4;Name=ENSG00000301844;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9735065	9737815	.	+	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8;gene_id=CHM13_chrY_G0000308;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=CHM13_chrY_G0000308;Name=TSPY7P
CHM13_chrY	CAT	transcript	9735065	9737815	1000	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000948;gene_id=CHM13_chrY_G0000308;Parent=CHM13_chrY_G0000308;transcript_name=CHM13_chrY_T0000948;gene_name=TSPY7P;ID=CHM13_chrY_T0000948;Name=TSPY7P
CHM13_chrY	CAT	exon	9735065	9735550	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000948;gene_id=CHM13_chrY_G0000308;Parent=CHM13_chrY_T0000948;transcript_name=CHM13_chrY_T0000948;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000948:0;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9735551	9736157	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000948;gene_id=CHM13_chrY_G0000308;Parent=CHM13_chrY_T0000948;transcript_name=CHM13_chrY_T0000948;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000948:0;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736158	9736235	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000948;gene_id=CHM13_chrY_G0000308;Parent=CHM13_chrY_T0000948;transcript_name=CHM13_chrY_T0000948;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000948:1;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736236	9736363	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000948;gene_id=CHM13_chrY_G0000308;Parent=CHM13_chrY_T0000948;transcript_name=CHM13_chrY_T0000948;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000948:1;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736364	9736475	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000948;gene_id=CHM13_chrY_G0000308;Parent=CHM13_chrY_T0000948;transcript_name=CHM13_chrY_T0000948;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000948:2;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736476	9736576	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000948;gene_id=CHM13_chrY_G0000308;Parent=CHM13_chrY_T0000948;transcript_name=CHM13_chrY_T0000948;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000948:2;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736577	9736722	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000948;gene_id=CHM13_chrY_G0000308;Parent=CHM13_chrY_T0000948;transcript_name=CHM13_chrY_T0000948;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000948:3;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736723	9736828	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000948;gene_id=CHM13_chrY_G0000308;Parent=CHM13_chrY_T0000948;transcript_name=CHM13_chrY_T0000948;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000948:3;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9736829	9736910	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000948;gene_id=CHM13_chrY_G0000308;Parent=CHM13_chrY_T0000948;transcript_name=CHM13_chrY_T0000948;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000948:4;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9736911	9737604	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000948;gene_id=CHM13_chrY_G0000308;Parent=CHM13_chrY_T0000948;transcript_name=CHM13_chrY_T0000948;gene_name=TSPY7P;ID=intron:CHM13_chrY_T0000948:4;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9737605	9737815	.	+	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=CHM13_chrY_T0000948;gene_id=CHM13_chrY_G0000308;Parent=CHM13_chrY_T0000948;transcript_name=CHM13_chrY_T0000948;gene_name=TSPY7P;ID=exon:CHM13_chrY_T0000948:5;Name=TSPY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9746990	9752728	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000309;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000309;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9746990	9752728	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000950;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_G0000309;transcript_name=CHM13_chrY_T0000950;gene_name=FAM197Y5;ID=CHM13_chrY_T0000950;Name=FAM197Y5
CHM13_chrY	CAT	exon	9746990	9747179	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000950;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_T0000950;transcript_name=CHM13_chrY_T0000950;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000950:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9747180	9750729	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000950;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_T0000950;transcript_name=CHM13_chrY_T0000950;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000950:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9750730	9750815	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000950;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_T0000950;transcript_name=CHM13_chrY_T0000950;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000950:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9750816	9752614	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000950;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_T0000950;transcript_name=CHM13_chrY_T0000950;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000950:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9752615	9752728	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000950;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_T0000950;transcript_name=CHM13_chrY_T0000950;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000950:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9747120	9752716	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000951;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_G0000309;transcript_name=CHM13_chrY_T0000951;gene_name=FAM197Y5;ID=CHM13_chrY_T0000951;Name=FAM197Y5
CHM13_chrY	CAT	exon	9747120	9747179	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000951;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_T0000951;transcript_name=CHM13_chrY_T0000951;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000951:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9747180	9750729	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000951;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_T0000951;transcript_name=CHM13_chrY_T0000951;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000951:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9750730	9750888	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000951;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_T0000951;transcript_name=CHM13_chrY_T0000951;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000951:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9750889	9752382	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000951;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_T0000951;transcript_name=CHM13_chrY_T0000951;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000951:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9752383	9752528	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000951;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_T0000951;transcript_name=CHM13_chrY_T0000951;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000951:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9752529	9752614	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000951;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_T0000951;transcript_name=CHM13_chrY_T0000951;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000951:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9752615	9752716	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000951;gene_id=CHM13_chrY_G0000309;Parent=CHM13_chrY_T0000951;transcript_name=CHM13_chrY_T0000951;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000951:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9752383	9754375	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_8;gene_id=CHM13_chrY_G0000310;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000310;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9752383	9754375	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000952;gene_id=CHM13_chrY_G0000310;Parent=CHM13_chrY_G0000310;transcript_name=CHM13_chrY_T0000952;gene_name=FAM197Y5;ID=CHM13_chrY_T0000952;Name=FAM197Y5
CHM13_chrY	CAT	exon	9752383	9752528	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000952;gene_id=CHM13_chrY_G0000310;Parent=CHM13_chrY_T0000952;transcript_name=CHM13_chrY_T0000952;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000952:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9752529	9754064	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000952;gene_id=CHM13_chrY_G0000310;Parent=CHM13_chrY_T0000952;transcript_name=CHM13_chrY_T0000952;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000952:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9754065	9754375	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000952;gene_id=CHM13_chrY_G0000310;Parent=CHM13_chrY_T0000952;transcript_name=CHM13_chrY_T0000952;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000952:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9755369	9758137	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1_5;gene_id=CHM13_chrY_G0000311;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000311;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	9755369	9758137	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_G0000311;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000953;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9755369	9755461	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000953;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000953:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9755462	9755722	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000953;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000953:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9755723	9755860	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000953;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000953:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9755861	9756467	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000953;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000953:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756468	9756545	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000953;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000953:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756546	9756673	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000953;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000953:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756674	9756785	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000953;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000953:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756786	9756886	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000953;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000953:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756887	9757032	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000953;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000953:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757033	9757138	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000953;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000953:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757139	9757220	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000953;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000953:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757221	9757914	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000953;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000953:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757915	9758137	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000953;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000953;transcript_name=CHM13_chrY_T0000953;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000953:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9755381	9758125	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_G0000311;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000955;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9755381	9755461	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000955;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000955:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9755462	9755722	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000955;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000955:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9755723	9755860	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000955;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000955:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9755861	9756467	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000955;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000955:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756468	9756545	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000955;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000955:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756546	9756673	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000955;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000955:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756674	9756785	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000955;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000955:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756786	9756893	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000955;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000955:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756894	9757032	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000955;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000955:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757033	9757138	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000955;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000955:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757139	9757220	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000955;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000955:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757221	9757914	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000955;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000955:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757915	9758125	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000955;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000955;transcript_name=CHM13_chrY_T0000955;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000955:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9755390	9758132	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_G0000311;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000956;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9755390	9755461	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000956;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000956:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9755462	9755722	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000956;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000956:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9755723	9755860	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000956;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000956:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9755861	9756467	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000956;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000956:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756468	9756545	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000956;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000956:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756546	9756673	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000956;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000956:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756674	9756785	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000956;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000956:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756786	9756886	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000956;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000956:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756887	9757032	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000956;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000956:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757033	9757127	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000956;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000956:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757128	9757220	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000956;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000956:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757221	9757914	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000956;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000956:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757915	9758132	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000956;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000956;transcript_name=CHM13_chrY_T0000956;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000956:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9755592	9758130	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000957;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_G0000311;transcript_name=CHM13_chrY_T0000957;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000957;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9755592	9755860	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000957;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000957;transcript_name=CHM13_chrY_T0000957;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000957:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9755861	9756467	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000957;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000957;transcript_name=CHM13_chrY_T0000957;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000957:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756468	9756545	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000957;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000957;transcript_name=CHM13_chrY_T0000957;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000957:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756546	9756673	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000957;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000957;transcript_name=CHM13_chrY_T0000957;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000957:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756674	9756785	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000957;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000957;transcript_name=CHM13_chrY_T0000957;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000957:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756786	9756886	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000957;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000957;transcript_name=CHM13_chrY_T0000957;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000957:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756887	9757032	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000957;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000957;transcript_name=CHM13_chrY_T0000957;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000957:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757033	9757138	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000957;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000957;transcript_name=CHM13_chrY_T0000957;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000957:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757139	9757220	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000957;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000957;transcript_name=CHM13_chrY_T0000957;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000957:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757221	9757914	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000957;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000957;transcript_name=CHM13_chrY_T0000957;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000957:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757915	9758130	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000957;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000957;transcript_name=CHM13_chrY_T0000957;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000957:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9755688	9758125	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000958;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_G0000311;transcript_name=CHM13_chrY_T0000958;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000958;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9755688	9755860	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000958;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000958;transcript_name=CHM13_chrY_T0000958;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000958:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9755861	9756467	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000958;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000958;transcript_name=CHM13_chrY_T0000958;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000958:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756468	9756545	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000958;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000958;transcript_name=CHM13_chrY_T0000958;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000958:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756546	9756673	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000958;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000958;transcript_name=CHM13_chrY_T0000958;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000958:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756674	9756785	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000958;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000958;transcript_name=CHM13_chrY_T0000958;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000958:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756786	9756893	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000958;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000958;transcript_name=CHM13_chrY_T0000958;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000958:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756894	9757032	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000958;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000958;transcript_name=CHM13_chrY_T0000958;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000958:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757033	9757138	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000958;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000958;transcript_name=CHM13_chrY_T0000958;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000958:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757139	9757220	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000958;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000958;transcript_name=CHM13_chrY_T0000958;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000958:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757221	9757914	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000958;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000958;transcript_name=CHM13_chrY_T0000958;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000958:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757915	9758125	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000958;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000958;transcript_name=CHM13_chrY_T0000958;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000958:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9755814	9758136	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000959;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_G0000311;transcript_name=CHM13_chrY_T0000959;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000959;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9755814	9755916	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000959;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000959;transcript_name=CHM13_chrY_T0000959;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000959:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9755917	9756485	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000959;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000959;transcript_name=CHM13_chrY_T0000959;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000959:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756486	9756545	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000959;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000959;transcript_name=CHM13_chrY_T0000959;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000959:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756546	9756673	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000959;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000959;transcript_name=CHM13_chrY_T0000959;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000959:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756674	9756785	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000959;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000959;transcript_name=CHM13_chrY_T0000959;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000959:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756786	9756886	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000959;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000959;transcript_name=CHM13_chrY_T0000959;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000959:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756887	9757032	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000959;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000959;transcript_name=CHM13_chrY_T0000959;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000959:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757033	9757138	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000959;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000959;transcript_name=CHM13_chrY_T0000959;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000959:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757139	9757220	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000959;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000959;transcript_name=CHM13_chrY_T0000959;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000959:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757221	9757914	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000959;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000959;transcript_name=CHM13_chrY_T0000959;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000959:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757915	9758136	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000959;gene_id=CHM13_chrY_G0000311;Parent=CHM13_chrY_T0000959;transcript_name=CHM13_chrY_T0000959;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000959:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9755375	9757937	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1_5;gene_id=CHM13_chrY_G0000312;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=CHM13_chrY_G0000312;Name=TSPY6P
CHM13_chrY	CAT	transcript	9755375	9757937	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_G0000312;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=CHM13_chrY_T0000954;Name=TSPY6P
CHM13_chrY	CAT	exon	9755375	9755585	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_T0000954;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000954:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9755586	9755593	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_T0000954;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000954:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9755594	9755860	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_T0000954;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000954:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9755861	9756467	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_T0000954;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000954:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756468	9756545	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_T0000954;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000954:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756546	9756673	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_T0000954;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000954:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756674	9756785	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_T0000954;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000954:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756786	9756886	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_T0000954;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000954:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756887	9757032	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_T0000954;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000954:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757033	9757138	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_T0000954;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000954:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757139	9757220	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_T0000954;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000954:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757221	9757914	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_T0000954;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000954:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757915	9757937	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000954;gene_id=CHM13_chrY_G0000312;Parent=CHM13_chrY_T0000954;transcript_name=CHM13_chrY_T0000954;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000954:6;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9756515	9758132	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=CHM13_chrY_G0000313;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000313;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	9756515	9758123	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000960;gene_id=CHM13_chrY_G0000313;Parent=CHM13_chrY_G0000313;transcript_name=CHM13_chrY_T0000960;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000960;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9756515	9756545	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000960;gene_id=CHM13_chrY_G0000313;Parent=CHM13_chrY_T0000960;transcript_name=CHM13_chrY_T0000960;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000960:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9756546	9756673	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000960;gene_id=CHM13_chrY_G0000313;Parent=CHM13_chrY_T0000960;transcript_name=CHM13_chrY_T0000960;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000960:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9756674	9757032	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000960;gene_id=CHM13_chrY_G0000313;Parent=CHM13_chrY_T0000960;transcript_name=CHM13_chrY_T0000960;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000960:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757033	9757138	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000960;gene_id=CHM13_chrY_G0000313;Parent=CHM13_chrY_T0000960;transcript_name=CHM13_chrY_T0000960;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000960:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757139	9757220	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000960;gene_id=CHM13_chrY_G0000313;Parent=CHM13_chrY_T0000960;transcript_name=CHM13_chrY_T0000960;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000960:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757221	9757914	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000960;gene_id=CHM13_chrY_G0000313;Parent=CHM13_chrY_T0000960;transcript_name=CHM13_chrY_T0000960;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000960:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757915	9758123	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000960;gene_id=CHM13_chrY_G0000313;Parent=CHM13_chrY_T0000960;transcript_name=CHM13_chrY_T0000960;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000960:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9757060	9758132	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000961;gene_id=CHM13_chrY_G0000313;Parent=CHM13_chrY_G0000313;transcript_name=CHM13_chrY_T0000961;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000961;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9757060	9757220	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000961;gene_id=CHM13_chrY_G0000313;Parent=CHM13_chrY_T0000961;transcript_name=CHM13_chrY_T0000961;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000961:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9757221	9757914	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000961;gene_id=CHM13_chrY_G0000313;Parent=CHM13_chrY_T0000961;transcript_name=CHM13_chrY_T0000961;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000961:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9757915	9758132	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000961;gene_id=CHM13_chrY_G0000313;Parent=CHM13_chrY_T0000961;transcript_name=CHM13_chrY_T0000961;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000961:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9767267	9773005	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000314;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000314;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9767267	9773005	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000962;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_G0000314;transcript_name=CHM13_chrY_T0000962;gene_name=FAM197Y5;ID=CHM13_chrY_T0000962;Name=FAM197Y5
CHM13_chrY	CAT	exon	9767267	9767456	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000962;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_T0000962;transcript_name=CHM13_chrY_T0000962;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000962:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9767457	9771006	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000962;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_T0000962;transcript_name=CHM13_chrY_T0000962;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000962:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9771007	9771092	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000962;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_T0000962;transcript_name=CHM13_chrY_T0000962;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000962:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9771093	9772891	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000962;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_T0000962;transcript_name=CHM13_chrY_T0000962;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000962:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9772892	9773005	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000962;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_T0000962;transcript_name=CHM13_chrY_T0000962;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000962:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9767397	9772993	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000963;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_G0000314;transcript_name=CHM13_chrY_T0000963;gene_name=FAM197Y5;ID=CHM13_chrY_T0000963;Name=FAM197Y5
CHM13_chrY	CAT	exon	9767397	9767456	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000963;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_T0000963;transcript_name=CHM13_chrY_T0000963;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000963:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9767457	9771006	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000963;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_T0000963;transcript_name=CHM13_chrY_T0000963;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000963:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9771007	9771165	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000963;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_T0000963;transcript_name=CHM13_chrY_T0000963;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000963:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9771166	9772659	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000963;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_T0000963;transcript_name=CHM13_chrY_T0000963;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000963:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9772660	9772805	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000963;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_T0000963;transcript_name=CHM13_chrY_T0000963;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000963:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9772806	9772891	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000963;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_T0000963;transcript_name=CHM13_chrY_T0000963;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000963:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9772892	9772993	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000963;gene_id=CHM13_chrY_G0000314;Parent=CHM13_chrY_T0000963;transcript_name=CHM13_chrY_T0000963;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000963:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9772660	9774652	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_18;gene_id=CHM13_chrY_G0000315;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000315;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9772660	9774652	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_18;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_18;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000964;gene_id=CHM13_chrY_G0000315;Parent=CHM13_chrY_G0000315;transcript_name=CHM13_chrY_T0000964;gene_name=FAM197Y5;ID=CHM13_chrY_T0000964;Name=FAM197Y5
CHM13_chrY	CAT	exon	9772660	9772805	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_18;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_18;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000964;gene_id=CHM13_chrY_G0000315;Parent=CHM13_chrY_T0000964;transcript_name=CHM13_chrY_T0000964;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000964:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9772806	9774341	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_18;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_18;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000964;gene_id=CHM13_chrY_G0000315;Parent=CHM13_chrY_T0000964;transcript_name=CHM13_chrY_T0000964;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000964:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9774342	9774652	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_18;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_18;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000964;gene_id=CHM13_chrY_G0000315;Parent=CHM13_chrY_T0000964;transcript_name=CHM13_chrY_T0000964;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000964:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9775606	9778403	.	+	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=CHM13_chrY_G0000316;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=CHM13_chrY_G0000316;Name=TSPY3
CHM13_chrY	CAT	transcript	9775606	9778403	100	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_G0000316;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=CHM13_chrY_T0000965;Name=TSPY3
CHM13_chrY	CAT	exon	9775606	9776137	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000965:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9775652	9776137	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000965:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9775652	9775654	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000965;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9776138	9776744	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000965:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9776745	9776822	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000965:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9776745	9776822	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000965:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9776823	9776950	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000965:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9776951	9777062	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000965:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9776951	9777062	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000965:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9777063	9777163	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000965:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9777164	9777309	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000965:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9777164	9777309	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000965:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9777310	9777415	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000965:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9777416	9777497	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000965:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9777416	9777497	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000965:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9777498	9778191	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000965:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9778192	9778403	.	+	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000965:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9778192	9778214	.	+	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000965:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9778212	9778214	.	+	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000965;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000965;transcript_name=CHM13_chrY_T0000965;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000965;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9775652	9778402	100	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_G0000316;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=CHM13_chrY_T0000966;Name=TSPY3
CHM13_chrY	CAT	exon	9775652	9776137	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000966:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9775652	9776137	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000966:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9775652	9775654	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000966;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9776138	9776744	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000966:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9776745	9776822	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000966:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9776745	9776822	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000966:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9776823	9776950	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000966:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9776951	9777062	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000966:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9776951	9777062	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000966:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9777063	9777163	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000966:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9777164	9777309	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000966:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9777164	9777309	.	+	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000966:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9777310	9777404	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000966:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9777405	9777497	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000966:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9777405	9777467	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000966:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9777465	9777467	.	+	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000966;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9777498	9778191	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000966:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9778192	9778402	.	+	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000966;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000966;transcript_name=CHM13_chrY_T0000966;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000966:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9775652	9778214	100	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_G0000316;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=CHM13_chrY_T0000967;Name=TSPY3
CHM13_chrY	CAT	exon	9775652	9775738	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000967:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9775652	9775738	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000967:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9775652	9775654	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=start_codon:CHM13_chrY_T0000967;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9775739	9775999	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000967:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9776000	9776137	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000967:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9776000	9776137	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000967:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9776138	9776744	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000967:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9776745	9776822	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000967:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9776745	9776822	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000967:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9776823	9776950	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000967:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9776951	9777062	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000967:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9776951	9777062	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000967:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9777063	9777163	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000967:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9777164	9777309	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000967:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9777164	9777309	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000967:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9777310	9777415	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000967:4;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9777416	9777497	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000967:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9777416	9777497	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000967:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9777498	9778191	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000967:5;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9778192	9778214	.	+	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000967:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9778192	9778214	.	+	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=CDS:CHM13_chrY_T0000967:6;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9778212	9778214	.	+	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000967;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000967;transcript_name=CHM13_chrY_T0000967;gene_name=TSPY3;ID=stop_codon:CHM13_chrY_T0000967;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9775652	9778409	1000	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000968;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_G0000316;transcript_name=CHM13_chrY_T0000968;gene_name=TSPY3;ID=CHM13_chrY_T0000968;Name=TSPY3
CHM13_chrY	CAT	exon	9775652	9776137	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000968;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000968;transcript_name=CHM13_chrY_T0000968;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000968:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9776138	9776744	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000968;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000968;transcript_name=CHM13_chrY_T0000968;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000968:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9776745	9776822	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000968;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000968;transcript_name=CHM13_chrY_T0000968;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000968:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9776823	9776950	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000968;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000968;transcript_name=CHM13_chrY_T0000968;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000968:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9776951	9777497	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000968;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000968;transcript_name=CHM13_chrY_T0000968;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000968:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9777498	9777624	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000968;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000968;transcript_name=CHM13_chrY_T0000968;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000968:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9777625	9778409	.	+	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000968;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000968;transcript_name=CHM13_chrY_T0000968;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000968:3;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9777012	9778394	1000	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000969;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_G0000316;transcript_name=CHM13_chrY_T0000969;gene_name=TSPY3;ID=CHM13_chrY_T0000969;Name=TSPY3
CHM13_chrY	CAT	exon	9777012	9777309	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000969;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000969;transcript_name=CHM13_chrY_T0000969;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000969:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9777310	9777404	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000969;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000969;transcript_name=CHM13_chrY_T0000969;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000969:0;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9777405	9777497	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000969;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000969;transcript_name=CHM13_chrY_T0000969;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000969:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9777498	9778191	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000969;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000969;transcript_name=CHM13_chrY_T0000969;gene_name=TSPY3;ID=intron:CHM13_chrY_T0000969:1;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9778192	9778394	.	+	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=CHM13_chrY_T0000969;gene_id=CHM13_chrY_G0000316;Parent=CHM13_chrY_T0000969;transcript_name=CHM13_chrY_T0000969;gene_name=TSPY3;ID=exon:CHM13_chrY_T0000969:2;Name=TSPY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9787567	9793313	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=CHM13_chrY_G0000317;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000317;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9787567	9793313	1000	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000970;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_G0000317;transcript_name=CHM13_chrY_T0000970;gene_name=FAM197Y5;ID=CHM13_chrY_T0000970;Name=FAM197Y5
CHM13_chrY	CAT	exon	9787567	9787756	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000970;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_T0000970;transcript_name=CHM13_chrY_T0000970;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000970:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9787757	9791306	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000970;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_T0000970;transcript_name=CHM13_chrY_T0000970;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000970:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9791307	9791392	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000970;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_T0000970;transcript_name=CHM13_chrY_T0000970;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000970:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9791393	9793199	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000970;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_T0000970;transcript_name=CHM13_chrY_T0000970;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000970:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9793200	9793313	.	-	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000970;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_T0000970;transcript_name=CHM13_chrY_T0000970;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000970:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9787697	9793301	1000	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000971;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_G0000317;transcript_name=CHM13_chrY_T0000971;gene_name=FAM197Y5;ID=CHM13_chrY_T0000971;Name=FAM197Y5
CHM13_chrY	CAT	exon	9787697	9787756	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000971;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_T0000971;transcript_name=CHM13_chrY_T0000971;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000971:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9787757	9791306	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000971;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_T0000971;transcript_name=CHM13_chrY_T0000971;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000971:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9791307	9791465	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000971;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_T0000971;transcript_name=CHM13_chrY_T0000971;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000971:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9791466	9792967	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000971;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_T0000971;transcript_name=CHM13_chrY_T0000971;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000971:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9792968	9793113	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000971;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_T0000971;transcript_name=CHM13_chrY_T0000971;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000971:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9793114	9793199	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000971;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_T0000971;transcript_name=CHM13_chrY_T0000971;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000971:2;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9793200	9793301	.	-	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000971;gene_id=CHM13_chrY_G0000317;Parent=CHM13_chrY_T0000971;transcript_name=CHM13_chrY_T0000971;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000971:3;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9792968	9794960	.	-	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8;gene_id=CHM13_chrY_G0000318;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=CHM13_chrY_G0000318;Name=FAM197Y5
CHM13_chrY	CAT	transcript	9792968	9794960	1000	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000972;gene_id=CHM13_chrY_G0000318;Parent=CHM13_chrY_G0000318;transcript_name=CHM13_chrY_T0000972;gene_name=FAM197Y5;ID=CHM13_chrY_T0000972;Name=FAM197Y5
CHM13_chrY	CAT	exon	9792968	9793113	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000972;gene_id=CHM13_chrY_G0000318;Parent=CHM13_chrY_T0000972;transcript_name=CHM13_chrY_T0000972;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000972:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9793114	9794649	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000972;gene_id=CHM13_chrY_G0000318;Parent=CHM13_chrY_T0000972;transcript_name=CHM13_chrY_T0000972;gene_name=FAM197Y5;ID=intron:CHM13_chrY_T0000972:0;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9794650	9794960	.	-	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=CHM13_chrY_T0000972;gene_id=CHM13_chrY_G0000318;Parent=CHM13_chrY_T0000972;transcript_name=CHM13_chrY_T0000972;gene_name=FAM197Y5;ID=exon:CHM13_chrY_T0000972:1;Name=FAM197Y5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9795914	9798710	.	+	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=CHM13_chrY_G0000319;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=CHM13_chrY_G0000319;Name=TSPY10
CHM13_chrY	CAT	transcript	9795914	9798710	100	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_G0000319;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=CHM13_chrY_T0000973;Name=TSPY10
CHM13_chrY	CAT	exon	9795914	9796445	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000973:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9795960	9796445	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000973:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9795960	9795962	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=start_codon:CHM13_chrY_T0000973;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9796446	9797052	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000973:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9797053	9797130	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000973:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9797053	9797130	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000973:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9797131	9797258	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000973:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9797259	9797370	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000973:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9797259	9797370	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000973:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9797371	9797471	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000973:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9797472	9797617	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000973:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9797472	9797617	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000973:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9797618	9797723	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000973:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9797724	9797805	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000973:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9797724	9797805	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000973:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9797806	9798499	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000973:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9798500	9798710	.	+	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000973:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9798500	9798522	.	+	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000973:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9798520	9798522	.	+	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000973;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000973;transcript_name=CHM13_chrY_T0000973;gene_name=TSPY10;ID=stop_codon:CHM13_chrY_T0000973;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9795960	9798709	100	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_G0000319;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=CHM13_chrY_T0000974;Name=TSPY10
CHM13_chrY	CAT	exon	9795960	9796445	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000974:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9795960	9796445	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000974:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9795960	9795962	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=start_codon:CHM13_chrY_T0000974;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9796446	9797052	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000974:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9797053	9797130	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000974:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9797053	9797130	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000974:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9797131	9797258	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000974:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9797259	9797370	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000974:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9797259	9797370	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000974:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9797371	9797471	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000974:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9797472	9797617	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000974:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9797472	9797617	.	+	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000974:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9797618	9797712	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000974:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9797713	9797805	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000974:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9797713	9797775	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=CDS:CHM13_chrY_T0000974:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9797773	9797775	.	+	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=stop_codon:CHM13_chrY_T0000974;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9797806	9798499	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000974:4;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9798500	9798709	.	+	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000974;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000974;transcript_name=CHM13_chrY_T0000974;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000974:5;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9795960	9798716	1000	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000975;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_G0000319;transcript_name=CHM13_chrY_T0000975;gene_name=TSPY10;ID=CHM13_chrY_T0000975;Name=TSPY10
CHM13_chrY	CAT	exon	9795960	9796445	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000975;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000975;transcript_name=CHM13_chrY_T0000975;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000975:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9796446	9797052	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000975;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000975;transcript_name=CHM13_chrY_T0000975;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000975:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9797053	9797130	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000975;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000975;transcript_name=CHM13_chrY_T0000975;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000975:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9797131	9797258	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000975;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000975;transcript_name=CHM13_chrY_T0000975;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000975:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9797259	9797805	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000975;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000975;transcript_name=CHM13_chrY_T0000975;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000975:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9797806	9797932	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000975;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000975;transcript_name=CHM13_chrY_T0000975;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000975:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9797933	9798716	.	+	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000975;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000975;transcript_name=CHM13_chrY_T0000975;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000975:3;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9797320	9798701	1000	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000976;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_G0000319;transcript_name=CHM13_chrY_T0000976;gene_name=TSPY10;ID=CHM13_chrY_T0000976;Name=TSPY10
CHM13_chrY	CAT	exon	9797320	9797617	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000976;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000976;transcript_name=CHM13_chrY_T0000976;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000976:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9797618	9797723	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000976;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000976;transcript_name=CHM13_chrY_T0000976;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000976:0;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9797724	9797805	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000976;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000976;transcript_name=CHM13_chrY_T0000976;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000976:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9797806	9798499	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000976;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000976;transcript_name=CHM13_chrY_T0000976;gene_name=TSPY10;ID=intron:CHM13_chrY_T0000976:1;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9798500	9798701	.	+	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=CHM13_chrY_T0000976;gene_id=CHM13_chrY_G0000319;Parent=CHM13_chrY_T0000976;transcript_name=CHM13_chrY_T0000976;gene_name=TSPY10;ID=exon:CHM13_chrY_T0000976:2;Name=TSPY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9805974	9813851	.	-	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000290607.1;gene_id=CHM13_chrY_G0000320;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=CHM13_chrY_G0000320;Name=FAM197Y3
CHM13_chrY	CAT	transcript	9805974	9813851	1000	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000977;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_G0000320;transcript_name=CHM13_chrY_T0000977;gene_name=FAM197Y3;ID=CHM13_chrY_T0000977;Name=FAM197Y3
CHM13_chrY	CAT	exon	9805974	9808087	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000977;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000977;transcript_name=CHM13_chrY_T0000977;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000977:0;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9808088	9811636	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000977;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000977;transcript_name=CHM13_chrY_T0000977;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000977:0;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9811637	9811722	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000977;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000977;transcript_name=CHM13_chrY_T0000977;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000977:1;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9811723	9813530	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000977;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000977;transcript_name=CHM13_chrY_T0000977;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000977:1;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9813531	9813640	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000977;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000977;transcript_name=CHM13_chrY_T0000977;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000977:2;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9813641	9813836	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000977;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000977;transcript_name=CHM13_chrY_T0000977;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000977:2;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9813837	9813851	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000977;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000977;transcript_name=CHM13_chrY_T0000977;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000977:3;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9808028	9813632	1000	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000978;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_G0000320;transcript_name=CHM13_chrY_T0000978;gene_name=FAM197Y3;ID=CHM13_chrY_T0000978;Name=FAM197Y3
CHM13_chrY	CAT	exon	9808028	9808087	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000978;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000978;transcript_name=CHM13_chrY_T0000978;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000978:0;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9808088	9811636	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000978;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000978;transcript_name=CHM13_chrY_T0000978;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000978:0;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9811637	9811795	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000978;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000978;transcript_name=CHM13_chrY_T0000978;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000978:1;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9811796	9813298	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000978;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000978;transcript_name=CHM13_chrY_T0000978;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000978:1;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9813299	9813444	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000978;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000978;transcript_name=CHM13_chrY_T0000978;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000978:2;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9813445	9813530	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000978;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000978;transcript_name=CHM13_chrY_T0000978;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000978:2;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9813531	9813632	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000978;gene_id=CHM13_chrY_G0000320;Parent=CHM13_chrY_T0000978;transcript_name=CHM13_chrY_T0000978;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000978:3;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9813299	9815291	.	-	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000230066.7_1;gene_id=CHM13_chrY_G0000321;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y3;gene_sources=liftoff;ID=CHM13_chrY_G0000321;Name=FAM197Y3
CHM13_chrY	CAT	transcript	9813299	9815291	1000	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000979;gene_id=CHM13_chrY_G0000321;Parent=CHM13_chrY_G0000321;transcript_name=CHM13_chrY_T0000979;gene_name=FAM197Y3;ID=CHM13_chrY_T0000979;Name=FAM197Y3
CHM13_chrY	CAT	exon	9813299	9813444	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000979;gene_id=CHM13_chrY_G0000321;Parent=CHM13_chrY_T0000979;transcript_name=CHM13_chrY_T0000979;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000979:0;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9813445	9814980	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000979;gene_id=CHM13_chrY_G0000321;Parent=CHM13_chrY_T0000979;transcript_name=CHM13_chrY_T0000979;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000979:0;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9814981	9815291	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000979;gene_id=CHM13_chrY_G0000321;Parent=CHM13_chrY_T0000979;transcript_name=CHM13_chrY_T0000979;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000979:1;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9816282	9819050	.	+	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=CHM13_chrY_G0000322;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=CHM13_chrY_G0000322;Name=ENSG00000293749
CHM13_chrY	CAT	transcript	9816282	9819050	1000	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_G0000322;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000980;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9816282	9816374	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000980;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000980:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9816375	9816635	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000980;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000980:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9816636	9816773	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000980;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000980:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9816774	9817380	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000980;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000980:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817381	9817458	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000980;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000980:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817459	9817586	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000980;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000980:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817587	9817698	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000980;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000980:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817699	9817799	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000980;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000980:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817800	9817945	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000980;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000980:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817946	9818051	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000980;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000980:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818052	9818133	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000980;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000980:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9818134	9818827	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000980;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000980:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818828	9819050	.	+	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000980;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000980;transcript_name=CHM13_chrY_T0000980;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000980:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9816294	9819038	1000	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_G0000322;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000982;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9816294	9816374	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000982;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000982:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9816375	9816635	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000982;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000982:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9816636	9816773	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000982;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000982:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9816774	9817380	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000982;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000982:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817381	9817458	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000982;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000982:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817459	9817586	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000982;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000982:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817587	9817698	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000982;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000982:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817699	9817806	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000982;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000982:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817807	9817945	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000982;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000982:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817946	9818051	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000982;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000982:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818052	9818133	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000982;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000982:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9818134	9818827	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000982;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000982:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818828	9819038	.	+	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000982;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000982;transcript_name=CHM13_chrY_T0000982;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000982:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9816303	9819045	1000	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_G0000322;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000983;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9816303	9816374	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000983;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000983:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9816375	9816635	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000983;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000983:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9816636	9816773	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000983;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000983:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9816774	9817380	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000983;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000983:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817381	9817458	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000983;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000983:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817459	9817586	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000983;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000983:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817587	9817698	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000983;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000983:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817699	9817799	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000983;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000983:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817800	9817945	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000983;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000983:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817946	9818040	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000983;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000983:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818041	9818133	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000983;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000983:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9818134	9818827	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000983;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000983:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818828	9819045	.	+	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000983;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000983;transcript_name=CHM13_chrY_T0000983;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000983:6;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9816505	9819043	1000	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000984;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_G0000322;transcript_name=CHM13_chrY_T0000984;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000984;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9816505	9816773	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000984;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000984;transcript_name=CHM13_chrY_T0000984;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000984:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9816774	9817380	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000984;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000984;transcript_name=CHM13_chrY_T0000984;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000984:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817381	9817458	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000984;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000984;transcript_name=CHM13_chrY_T0000984;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000984:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817459	9817586	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000984;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000984;transcript_name=CHM13_chrY_T0000984;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000984:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817587	9817698	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000984;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000984;transcript_name=CHM13_chrY_T0000984;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000984:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817699	9817799	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000984;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000984;transcript_name=CHM13_chrY_T0000984;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000984:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817800	9817945	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000984;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000984;transcript_name=CHM13_chrY_T0000984;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000984:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817946	9818051	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000984;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000984;transcript_name=CHM13_chrY_T0000984;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000984:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818052	9818133	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000984;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000984;transcript_name=CHM13_chrY_T0000984;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000984:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9818134	9818827	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000984;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000984;transcript_name=CHM13_chrY_T0000984;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000984:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818828	9819043	.	+	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000984;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000984;transcript_name=CHM13_chrY_T0000984;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000984:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9816601	9819038	1000	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000985;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_G0000322;transcript_name=CHM13_chrY_T0000985;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000985;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9816601	9816773	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000985;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000985;transcript_name=CHM13_chrY_T0000985;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000985:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9816774	9817380	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000985;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000985;transcript_name=CHM13_chrY_T0000985;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000985:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817381	9817458	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000985;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000985;transcript_name=CHM13_chrY_T0000985;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000985:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817459	9817586	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000985;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000985;transcript_name=CHM13_chrY_T0000985;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000985:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817587	9817698	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000985;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000985;transcript_name=CHM13_chrY_T0000985;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000985:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817699	9817806	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000985;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000985;transcript_name=CHM13_chrY_T0000985;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000985:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817807	9817945	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000985;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000985;transcript_name=CHM13_chrY_T0000985;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000985:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817946	9818051	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000985;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000985;transcript_name=CHM13_chrY_T0000985;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000985:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818052	9818133	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000985;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000985;transcript_name=CHM13_chrY_T0000985;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000985:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9818134	9818827	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000985;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000985;transcript_name=CHM13_chrY_T0000985;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000985:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818828	9819038	.	+	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000985;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000985;transcript_name=CHM13_chrY_T0000985;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000985:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9816727	9819049	1000	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000986;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_G0000322;transcript_name=CHM13_chrY_T0000986;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000986;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9816727	9816829	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000986;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000986;transcript_name=CHM13_chrY_T0000986;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000986:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9816830	9817398	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000986;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000986;transcript_name=CHM13_chrY_T0000986;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000986:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817399	9817458	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000986;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000986;transcript_name=CHM13_chrY_T0000986;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000986:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817459	9817586	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000986;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000986;transcript_name=CHM13_chrY_T0000986;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000986:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817587	9817698	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000986;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000986;transcript_name=CHM13_chrY_T0000986;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000986:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817699	9817799	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000986;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000986;transcript_name=CHM13_chrY_T0000986;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000986:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817800	9817945	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000986;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000986;transcript_name=CHM13_chrY_T0000986;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000986:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817946	9818051	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000986;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000986;transcript_name=CHM13_chrY_T0000986;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000986:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818052	9818133	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000986;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000986;transcript_name=CHM13_chrY_T0000986;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000986:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9818134	9818827	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000986;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000986;transcript_name=CHM13_chrY_T0000986;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000986:4;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818828	9819049	.	+	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000986;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000986;transcript_name=CHM13_chrY_T0000986;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000986:5;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9817428	9819036	1000	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000987;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_G0000322;transcript_name=CHM13_chrY_T0000987;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000987;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9817428	9817458	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000987;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000987;transcript_name=CHM13_chrY_T0000987;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000987:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817459	9817586	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000987;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000987;transcript_name=CHM13_chrY_T0000987;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000987:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817587	9817945	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000987;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000987;transcript_name=CHM13_chrY_T0000987;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000987:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817946	9818051	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000987;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000987;transcript_name=CHM13_chrY_T0000987;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000987:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818052	9818133	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000987;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000987;transcript_name=CHM13_chrY_T0000987;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000987:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9818134	9818827	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000987;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000987;transcript_name=CHM13_chrY_T0000987;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000987:2;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818828	9819036	.	+	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000987;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000987;transcript_name=CHM13_chrY_T0000987;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000987:3;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9817973	9819045	1000	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000988;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_G0000322;transcript_name=CHM13_chrY_T0000988;gene_name=ENSG00000293749;ID=CHM13_chrY_T0000988;Name=ENSG00000293749
CHM13_chrY	CAT	exon	9817973	9818133	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000988;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000988;transcript_name=CHM13_chrY_T0000988;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000988:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9818134	9818827	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000988;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000988;transcript_name=CHM13_chrY_T0000988;gene_name=ENSG00000293749;ID=intron:CHM13_chrY_T0000988:0;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818828	9819045	.	+	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=CHM13_chrY_T0000988;gene_id=CHM13_chrY_G0000322;Parent=CHM13_chrY_T0000988;transcript_name=CHM13_chrY_T0000988;gene_name=ENSG00000293749;ID=exon:CHM13_chrY_T0000988:1;Name=ENSG00000293749;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9816288	9818850	.	+	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1;gene_id=CHM13_chrY_G0000323;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=CHM13_chrY_G0000323;Name=TSPY6P
CHM13_chrY	CAT	transcript	9816288	9818850	1000	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_G0000323;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=CHM13_chrY_T0000981;Name=TSPY6P
CHM13_chrY	CAT	exon	9816288	9816498	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_T0000981;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000981:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9816499	9816506	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_T0000981;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000981:0;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9816507	9816773	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_T0000981;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000981:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9816774	9817380	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_T0000981;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000981:1;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817381	9817458	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_T0000981;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000981:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817459	9817586	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_T0000981;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000981:2;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817587	9817698	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_T0000981;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000981:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817699	9817799	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_T0000981;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000981:3;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9817800	9817945	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_T0000981;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000981:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9817946	9818051	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_T0000981;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000981:4;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818052	9818133	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_T0000981;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000981:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9818134	9818827	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_T0000981;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=intron:CHM13_chrY_T0000981:5;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9818828	9818850	.	+	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=CHM13_chrY_T0000981;gene_id=CHM13_chrY_G0000323;Parent=CHM13_chrY_T0000981;transcript_name=CHM13_chrY_T0000981;gene_name=TSPY6P;ID=exon:CHM13_chrY_T0000981:6;Name=TSPY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9826282	9834159	.	-	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000290607.1;gene_id=CHM13_chrY_G0000324;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=CHM13_chrY_G0000324;Name=FAM197Y3
CHM13_chrY	CAT	transcript	9826282	9834159	1000	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000989;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_G0000324;transcript_name=CHM13_chrY_T0000989;gene_name=FAM197Y3;ID=CHM13_chrY_T0000989;Name=FAM197Y3
CHM13_chrY	CAT	exon	9826282	9828407	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000989;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000989;transcript_name=CHM13_chrY_T0000989;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000989:0;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9828408	9831958	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000989;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000989;transcript_name=CHM13_chrY_T0000989;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000989:0;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9831959	9832044	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000989;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000989;transcript_name=CHM13_chrY_T0000989;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000989:1;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9832045	9833838	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000989;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000989;transcript_name=CHM13_chrY_T0000989;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000989:1;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9833839	9833948	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000989;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000989;transcript_name=CHM13_chrY_T0000989;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000989:2;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9833949	9834144	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000989;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000989;transcript_name=CHM13_chrY_T0000989;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000989:2;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9834145	9834159	.	-	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000989;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000989;transcript_name=CHM13_chrY_T0000989;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000989:3;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9828348	9833940	1000	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000990;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_G0000324;transcript_name=CHM13_chrY_T0000990;gene_name=FAM197Y3;ID=CHM13_chrY_T0000990;Name=FAM197Y3
CHM13_chrY	CAT	exon	9828348	9828407	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000990;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000990;transcript_name=CHM13_chrY_T0000990;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000990:0;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9828408	9831958	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000990;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000990;transcript_name=CHM13_chrY_T0000990;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000990:0;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9831959	9832117	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000990;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000990;transcript_name=CHM13_chrY_T0000990;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000990:1;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9832118	9833606	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000990;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000990;transcript_name=CHM13_chrY_T0000990;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000990:1;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9833607	9833752	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000990;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000990;transcript_name=CHM13_chrY_T0000990;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000990:2;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9833753	9833838	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000990;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000990;transcript_name=CHM13_chrY_T0000990;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000990:2;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9833839	9833940	.	-	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000990;gene_id=CHM13_chrY_G0000324;Parent=CHM13_chrY_T0000990;transcript_name=CHM13_chrY_T0000990;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000990:3;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9833607	9835599	.	-	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000230066.7;gene_id=CHM13_chrY_G0000325;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y3;gene_sources=liftoff;ID=CHM13_chrY_G0000325;Name=FAM197Y3
CHM13_chrY	CAT	transcript	9833607	9835599	1000	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000991;gene_id=CHM13_chrY_G0000325;Parent=CHM13_chrY_G0000325;transcript_name=CHM13_chrY_T0000991;gene_name=FAM197Y3;ID=CHM13_chrY_T0000991;Name=FAM197Y3
CHM13_chrY	CAT	exon	9833607	9833752	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000991;gene_id=CHM13_chrY_G0000325;Parent=CHM13_chrY_T0000991;transcript_name=CHM13_chrY_T0000991;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000991:0;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9833753	9835288	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000991;gene_id=CHM13_chrY_G0000325;Parent=CHM13_chrY_T0000991;transcript_name=CHM13_chrY_T0000991;gene_name=FAM197Y3;ID=intron:CHM13_chrY_T0000991:0;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9835289	9835599	.	-	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=CHM13_chrY_T0000991;gene_id=CHM13_chrY_G0000325;Parent=CHM13_chrY_T0000991;transcript_name=CHM13_chrY_T0000991;gene_name=FAM197Y3;ID=exon:CHM13_chrY_T0000991:1;Name=FAM197Y3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9836553	9839365	.	+	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=CHM13_chrY_G0000326;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=CHM13_chrY_G0000326;Name=TSPY9
CHM13_chrY	CAT	transcript	9836553	9839365	100	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_G0000326;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=CHM13_chrY_T0000992;Name=TSPY9
CHM13_chrY	CAT	exon	9836553	9837102	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000992:0;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9836599	9837102	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000992:0;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	9836599	9836601	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=start_codon:CHM13_chrY_T0000992;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9837103	9837709	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000992:0;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9837710	9837787	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000992:1;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9837710	9837787	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000992:1;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9837788	9837915	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000992:1;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9837916	9838027	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000992:2;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9837916	9838027	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000992:2;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9838028	9838128	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000992:2;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9838129	9838274	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000992:3;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9838129	9838274	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000992:3;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9838275	9838380	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000992:3;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9838381	9838462	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000992:4;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9838381	9838462	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000992:4;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9838463	9839154	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=intron:CHM13_chrY_T0000992:4;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9839155	9839365	.	+	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=exon:CHM13_chrY_T0000992:5;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	9839155	9839177	.	+	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=CDS:CHM13_chrY_T0000992:5;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	9839175	9839177	.	+	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=CHM13_chrY_T0000992;gene_id=CHM13_chrY_G0000326;Parent=CHM13_chrY_T0000992;transcript_name=CHM13_chrY_T0000992;gene_name=TSPY9;ID=stop_codon:CHM13_chrY_T0000992;Name=TSPY9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9853611	9855841	.	-	.	source_gene_common_name=FAM197Y1;source_gene=ENSG00000224336.2;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;gene_id=CHM13_chrY_G0000327;gene_biotype=unprocessed_pseudogene;gene_name=FAM197Y1;gene_sources=liftoff;ID=CHM13_chrY_G0000327;Name=FAM197Y1
CHM13_chrY	CAT	transcript	9853611	9855841	1000	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=CHM13_chrY_T0000993;gene_id=CHM13_chrY_G0000327;Parent=CHM13_chrY_G0000327;transcript_name=CHM13_chrY_T0000993;gene_name=FAM197Y1;ID=CHM13_chrY_T0000993;Name=FAM197Y1
CHM13_chrY	CAT	exon	9853611	9853700	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=CHM13_chrY_T0000993;gene_id=CHM13_chrY_G0000327;Parent=CHM13_chrY_T0000993;transcript_name=CHM13_chrY_T0000993;gene_name=FAM197Y1;ID=exon:CHM13_chrY_T0000993:0;Name=FAM197Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9853701	9853818	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=CHM13_chrY_T0000993;gene_id=CHM13_chrY_G0000327;Parent=CHM13_chrY_T0000993;transcript_name=CHM13_chrY_T0000993;gene_name=FAM197Y1;ID=intron:CHM13_chrY_T0000993:0;Name=FAM197Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9853819	9853964	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=CHM13_chrY_T0000993;gene_id=CHM13_chrY_G0000327;Parent=CHM13_chrY_T0000993;transcript_name=CHM13_chrY_T0000993;gene_name=FAM197Y1;ID=exon:CHM13_chrY_T0000993:1;Name=FAM197Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9853965	9854050	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=CHM13_chrY_T0000993;gene_id=CHM13_chrY_G0000327;Parent=CHM13_chrY_T0000993;transcript_name=CHM13_chrY_T0000993;gene_name=FAM197Y1;ID=intron:CHM13_chrY_T0000993:1;Name=FAM197Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9854051	9854160	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=CHM13_chrY_T0000993;gene_id=CHM13_chrY_G0000327;Parent=CHM13_chrY_T0000993;transcript_name=CHM13_chrY_T0000993;gene_name=FAM197Y1;ID=exon:CHM13_chrY_T0000993:2;Name=FAM197Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9854161	9854356	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=CHM13_chrY_T0000993;gene_id=CHM13_chrY_G0000327;Parent=CHM13_chrY_T0000993;transcript_name=CHM13_chrY_T0000993;gene_name=FAM197Y1;ID=intron:CHM13_chrY_T0000993:2;Name=FAM197Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9854357	9854418	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=CHM13_chrY_T0000993;gene_id=CHM13_chrY_G0000327;Parent=CHM13_chrY_T0000993;transcript_name=CHM13_chrY_T0000993;gene_name=FAM197Y1;ID=exon:CHM13_chrY_T0000993:3;Name=FAM197Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9854419	9855485	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=CHM13_chrY_T0000993;gene_id=CHM13_chrY_G0000327;Parent=CHM13_chrY_T0000993;transcript_name=CHM13_chrY_T0000993;gene_name=FAM197Y1;ID=intron:CHM13_chrY_T0000993:3;Name=FAM197Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9855486	9855841	.	-	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=CHM13_chrY_T0000993;gene_id=CHM13_chrY_G0000327;Parent=CHM13_chrY_T0000993;transcript_name=CHM13_chrY_T0000993;gene_name=FAM197Y1;ID=exon:CHM13_chrY_T0000993:4;Name=FAM197Y1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9856805	9859377	.	+	.	source_gene_common_name=TSPY15P;source_gene=ENSG00000236786.1;gene_id=CHM13_chrY_G0000328;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY15P;gene_sources=liftoff;ID=CHM13_chrY_G0000328;Name=TSPY15P
CHM13_chrY	CAT	transcript	9856805	9859377	1000	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=CHM13_chrY_T0000994;gene_id=CHM13_chrY_G0000328;Parent=CHM13_chrY_G0000328;transcript_name=CHM13_chrY_T0000994;gene_name=TSPY15P;ID=CHM13_chrY_T0000994;Name=TSPY15P
CHM13_chrY	CAT	exon	9856805	9857276	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=CHM13_chrY_T0000994;gene_id=CHM13_chrY_G0000328;Parent=CHM13_chrY_T0000994;transcript_name=CHM13_chrY_T0000994;gene_name=TSPY15P;ID=exon:CHM13_chrY_T0000994:0;Name=TSPY15P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9857277	9857883	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=CHM13_chrY_T0000994;gene_id=CHM13_chrY_G0000328;Parent=CHM13_chrY_T0000994;transcript_name=CHM13_chrY_T0000994;gene_name=TSPY15P;ID=intron:CHM13_chrY_T0000994:0;Name=TSPY15P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9857884	9857961	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=CHM13_chrY_T0000994;gene_id=CHM13_chrY_G0000328;Parent=CHM13_chrY_T0000994;transcript_name=CHM13_chrY_T0000994;gene_name=TSPY15P;ID=exon:CHM13_chrY_T0000994:1;Name=TSPY15P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9857962	9858089	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=CHM13_chrY_T0000994;gene_id=CHM13_chrY_G0000328;Parent=CHM13_chrY_T0000994;transcript_name=CHM13_chrY_T0000994;gene_name=TSPY15P;ID=intron:CHM13_chrY_T0000994:1;Name=TSPY15P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9858090	9858201	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=CHM13_chrY_T0000994;gene_id=CHM13_chrY_G0000328;Parent=CHM13_chrY_T0000994;transcript_name=CHM13_chrY_T0000994;gene_name=TSPY15P;ID=exon:CHM13_chrY_T0000994:2;Name=TSPY15P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9858202	9858302	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=CHM13_chrY_T0000994;gene_id=CHM13_chrY_G0000328;Parent=CHM13_chrY_T0000994;transcript_name=CHM13_chrY_T0000994;gene_name=TSPY15P;ID=intron:CHM13_chrY_T0000994:2;Name=TSPY15P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9858303	9858447	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=CHM13_chrY_T0000994;gene_id=CHM13_chrY_G0000328;Parent=CHM13_chrY_T0000994;transcript_name=CHM13_chrY_T0000994;gene_name=TSPY15P;ID=exon:CHM13_chrY_T0000994:3;Name=TSPY15P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9858448	9858542	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=CHM13_chrY_T0000994;gene_id=CHM13_chrY_G0000328;Parent=CHM13_chrY_T0000994;transcript_name=CHM13_chrY_T0000994;gene_name=TSPY15P;ID=intron:CHM13_chrY_T0000994:3;Name=TSPY15P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9858543	9858635	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=CHM13_chrY_T0000994;gene_id=CHM13_chrY_G0000328;Parent=CHM13_chrY_T0000994;transcript_name=CHM13_chrY_T0000994;gene_name=TSPY15P;ID=exon:CHM13_chrY_T0000994:4;Name=TSPY15P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9858636	9859355	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=CHM13_chrY_T0000994;gene_id=CHM13_chrY_G0000328;Parent=CHM13_chrY_T0000994;transcript_name=CHM13_chrY_T0000994;gene_name=TSPY15P;ID=intron:CHM13_chrY_T0000994:4;Name=TSPY15P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9859356	9859377	.	+	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=CHM13_chrY_T0000994;gene_id=CHM13_chrY_G0000328;Parent=CHM13_chrY_T0000994;transcript_name=CHM13_chrY_T0000994;gene_name=TSPY15P;ID=exon:CHM13_chrY_T0000994:5;Name=TSPY15P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9856809	9859576	.	+	.	source_gene_common_name=ENSG00000308528;source_gene=ENSG00000308528.1;gene_id=CHM13_chrY_G0000329;gene_biotype=lncRNA;gene_name=ENSG00000308528;gene_sources=liftoff;ID=CHM13_chrY_G0000329;Name=ENSG00000308528
CHM13_chrY	CAT	transcript	9856809	9859576	1000	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000995;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_G0000329;transcript_name=CHM13_chrY_T0000995;gene_name=ENSG00000308528;ID=CHM13_chrY_T0000995;Name=ENSG00000308528
CHM13_chrY	CAT	exon	9856809	9857276	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000995;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000995;transcript_name=CHM13_chrY_T0000995;gene_name=ENSG00000308528;ID=exon:CHM13_chrY_T0000995:0;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9857277	9857883	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000995;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000995;transcript_name=CHM13_chrY_T0000995;gene_name=ENSG00000308528;ID=intron:CHM13_chrY_T0000995:0;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9857884	9857961	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000995;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000995;transcript_name=CHM13_chrY_T0000995;gene_name=ENSG00000308528;ID=exon:CHM13_chrY_T0000995:1;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9857962	9858089	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000995;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000995;transcript_name=CHM13_chrY_T0000995;gene_name=ENSG00000308528;ID=intron:CHM13_chrY_T0000995:1;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9858090	9858201	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000995;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000995;transcript_name=CHM13_chrY_T0000995;gene_name=ENSG00000308528;ID=exon:CHM13_chrY_T0000995:2;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9858202	9858302	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000995;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000995;transcript_name=CHM13_chrY_T0000995;gene_name=ENSG00000308528;ID=intron:CHM13_chrY_T0000995:2;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9858303	9858447	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000995;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000995;transcript_name=CHM13_chrY_T0000995;gene_name=ENSG00000308528;ID=exon:CHM13_chrY_T0000995:3;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9858448	9858553	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000995;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000995;transcript_name=CHM13_chrY_T0000995;gene_name=ENSG00000308528;ID=intron:CHM13_chrY_T0000995:3;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9858554	9858635	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000995;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000995;transcript_name=CHM13_chrY_T0000995;gene_name=ENSG00000308528;ID=exon:CHM13_chrY_T0000995:4;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9858636	9859331	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000995;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000995;transcript_name=CHM13_chrY_T0000995;gene_name=ENSG00000308528;ID=intron:CHM13_chrY_T0000995:4;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9859332	9859576	.	+	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000995;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000995;transcript_name=CHM13_chrY_T0000995;gene_name=ENSG00000308528;ID=exon:CHM13_chrY_T0000995:5;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9858562	9859569	1000	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000996;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_G0000329;transcript_name=CHM13_chrY_T0000996;gene_name=ENSG00000308528;ID=CHM13_chrY_T0000996;Name=ENSG00000308528
CHM13_chrY	CAT	exon	9858562	9858635	.	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000996;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000996;transcript_name=CHM13_chrY_T0000996;gene_name=ENSG00000308528;ID=exon:CHM13_chrY_T0000996:0;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9858636	9859331	.	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000996;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000996;transcript_name=CHM13_chrY_T0000996;gene_name=ENSG00000308528;ID=intron:CHM13_chrY_T0000996:0;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9859332	9859569	.	+	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=CHM13_chrY_T0000996;gene_id=CHM13_chrY_G0000329;Parent=CHM13_chrY_T0000996;transcript_name=CHM13_chrY_T0000996;gene_name=ENSG00000308528;ID=exon:CHM13_chrY_T0000996:1;Name=ENSG00000308528;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9918656	9941046	.	-	.	source_gene_common_name=ENSG00000309329;source_gene=ENSG00000309329.1;gene_id=CHM13_chrY_G0000330;gene_biotype=lncRNA;gene_name=ENSG00000309329;gene_sources=liftoff;ID=CHM13_chrY_G0000330;Name=ENSG00000309329
CHM13_chrY	CAT	transcript	9918656	9932016	1000	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000997;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_G0000330;transcript_name=CHM13_chrY_T0000997;gene_name=ENSG00000309329;ID=CHM13_chrY_T0000997;Name=ENSG00000309329
CHM13_chrY	CAT	exon	9918656	9919571	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000997;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000997;transcript_name=CHM13_chrY_T0000997;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000997:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9919572	9923481	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000997;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000997;transcript_name=CHM13_chrY_T0000997;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0000997:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9923482	9923583	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000997;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000997;transcript_name=CHM13_chrY_T0000997;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000997:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9923584	9923789	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000997;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000997;transcript_name=CHM13_chrY_T0000997;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0000997:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9923790	9923893	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000997;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000997;transcript_name=CHM13_chrY_T0000997;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000997:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9923894	9929326	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000997;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000997;transcript_name=CHM13_chrY_T0000997;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0000997:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9929327	9929416	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000997;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000997;transcript_name=CHM13_chrY_T0000997;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000997:3;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9929417	9931854	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000997;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000997;transcript_name=CHM13_chrY_T0000997;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0000997:3;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9931855	9932016	.	-	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000997;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000997;transcript_name=CHM13_chrY_T0000997;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000997:4;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9918658	9932016	1000	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000998;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_G0000330;transcript_name=CHM13_chrY_T0000998;gene_name=ENSG00000309329;ID=CHM13_chrY_T0000998;Name=ENSG00000309329
CHM13_chrY	CAT	exon	9918658	9919571	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000998;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000998;transcript_name=CHM13_chrY_T0000998;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000998:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9919572	9921120	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000998;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000998;transcript_name=CHM13_chrY_T0000998;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0000998:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9921121	9921234	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000998;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000998;transcript_name=CHM13_chrY_T0000998;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000998:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9921235	9923481	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000998;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000998;transcript_name=CHM13_chrY_T0000998;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0000998:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9923482	9923583	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000998;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000998;transcript_name=CHM13_chrY_T0000998;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000998:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9923584	9923789	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000998;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000998;transcript_name=CHM13_chrY_T0000998;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0000998:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9923790	9923893	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000998;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000998;transcript_name=CHM13_chrY_T0000998;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000998:3;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9923894	9929326	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000998;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000998;transcript_name=CHM13_chrY_T0000998;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0000998:3;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9929327	9929416	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000998;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000998;transcript_name=CHM13_chrY_T0000998;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000998:4;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9929417	9931854	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000998;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000998;transcript_name=CHM13_chrY_T0000998;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0000998:4;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9931855	9932016	.	-	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000998;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000998;transcript_name=CHM13_chrY_T0000998;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000998:5;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9918659	9932016	1000	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000999;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_G0000330;transcript_name=CHM13_chrY_T0000999;gene_name=ENSG00000309329;ID=CHM13_chrY_T0000999;Name=ENSG00000309329
CHM13_chrY	CAT	exon	9918659	9919571	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000999;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000999;transcript_name=CHM13_chrY_T0000999;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000999:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9919572	9923481	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000999;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000999;transcript_name=CHM13_chrY_T0000999;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0000999:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9923482	9923583	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000999;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000999;transcript_name=CHM13_chrY_T0000999;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000999:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9923584	9929326	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000999;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000999;transcript_name=CHM13_chrY_T0000999;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0000999:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9929327	9929416	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000999;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000999;transcript_name=CHM13_chrY_T0000999;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000999:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9929417	9931854	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000999;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000999;transcript_name=CHM13_chrY_T0000999;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0000999:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9931855	9932016	.	-	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0000999;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0000999;transcript_name=CHM13_chrY_T0000999;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0000999:3;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9918991	9932000	1000	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001000;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_G0000330;transcript_name=CHM13_chrY_T0001000;gene_name=ENSG00000309329;ID=CHM13_chrY_T0001000;Name=ENSG00000309329
CHM13_chrY	CAT	exon	9918991	9919571	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001000;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001000;transcript_name=CHM13_chrY_T0001000;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001000:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9919572	9921120	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001000;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001000;transcript_name=CHM13_chrY_T0001000;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001000:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9921121	9921234	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001000;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001000;transcript_name=CHM13_chrY_T0001000;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001000:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9921235	9923481	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001000;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001000;transcript_name=CHM13_chrY_T0001000;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001000:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9923482	9923583	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001000;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001000;transcript_name=CHM13_chrY_T0001000;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001000:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9923584	9923789	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001000;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001000;transcript_name=CHM13_chrY_T0001000;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001000:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9923790	9923902	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001000;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001000;transcript_name=CHM13_chrY_T0001000;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001000:3;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9923903	9929326	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001000;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001000;transcript_name=CHM13_chrY_T0001000;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001000:3;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9929327	9929416	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001000;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001000;transcript_name=CHM13_chrY_T0001000;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001000:4;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9929417	9931854	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001000;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001000;transcript_name=CHM13_chrY_T0001000;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001000:4;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9931855	9932000	.	-	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001000;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001000;transcript_name=CHM13_chrY_T0001000;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001000:5;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9918991	9932016	1000	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001001;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_G0000330;transcript_name=CHM13_chrY_T0001001;gene_name=ENSG00000309329;ID=CHM13_chrY_T0001001;Name=ENSG00000309329
CHM13_chrY	CAT	exon	9918991	9919571	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001001;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001001;transcript_name=CHM13_chrY_T0001001;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001001:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9919572	9921120	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001001;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001001;transcript_name=CHM13_chrY_T0001001;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001001:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9921121	9921234	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001001;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001001;transcript_name=CHM13_chrY_T0001001;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001001:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9921235	9923481	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001001;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001001;transcript_name=CHM13_chrY_T0001001;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001001:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9923482	9923583	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001001;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001001;transcript_name=CHM13_chrY_T0001001;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001001:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9923584	9929326	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001001;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001001;transcript_name=CHM13_chrY_T0001001;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001001:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9929327	9929416	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001001;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001001;transcript_name=CHM13_chrY_T0001001;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001001:3;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9929417	9931854	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001001;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001001;transcript_name=CHM13_chrY_T0001001;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001001:3;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9931855	9932016	.	-	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001001;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001001;transcript_name=CHM13_chrY_T0001001;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001001:4;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9918998	9932005	1000	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001002;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_G0000330;transcript_name=CHM13_chrY_T0001002;gene_name=ENSG00000309329;ID=CHM13_chrY_T0001002;Name=ENSG00000309329
CHM13_chrY	CAT	exon	9918998	9919571	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001002;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001002;transcript_name=CHM13_chrY_T0001002;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001002:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9919572	9929326	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001002;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001002;transcript_name=CHM13_chrY_T0001002;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001002:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9929327	9929416	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001002;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001002;transcript_name=CHM13_chrY_T0001002;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001002:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9929417	9931854	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001002;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001002;transcript_name=CHM13_chrY_T0001002;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001002:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9931855	9932005	.	-	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001002;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001002;transcript_name=CHM13_chrY_T0001002;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001002:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9919005	9932010	1000	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001003;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_G0000330;transcript_name=CHM13_chrY_T0001003;gene_name=ENSG00000309329;ID=CHM13_chrY_T0001003;Name=ENSG00000309329
CHM13_chrY	CAT	exon	9919005	9919571	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001003;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001003;transcript_name=CHM13_chrY_T0001003;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001003:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9919572	9923481	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001003;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001003;transcript_name=CHM13_chrY_T0001003;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001003:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9923482	9923583	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001003;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001003;transcript_name=CHM13_chrY_T0001003;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001003:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9923584	9923789	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001003;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001003;transcript_name=CHM13_chrY_T0001003;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001003:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9923790	9923902	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001003;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001003;transcript_name=CHM13_chrY_T0001003;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001003:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9923903	9929326	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001003;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001003;transcript_name=CHM13_chrY_T0001003;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001003:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9929327	9929416	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001003;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001003;transcript_name=CHM13_chrY_T0001003;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001003:3;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9929417	9931854	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001003;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001003;transcript_name=CHM13_chrY_T0001003;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001003:3;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9931855	9932010	.	-	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001003;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001003;transcript_name=CHM13_chrY_T0001003;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001003:4;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9919253	9941046	1000	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001004;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_G0000330;transcript_name=CHM13_chrY_T0001004;gene_name=ENSG00000309329;ID=CHM13_chrY_T0001004;Name=ENSG00000309329
CHM13_chrY	CAT	exon	9919253	9919571	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001004;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001004;transcript_name=CHM13_chrY_T0001004;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001004:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9919572	9921120	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001004;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001004;transcript_name=CHM13_chrY_T0001004;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001004:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9921121	9921234	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001004;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001004;transcript_name=CHM13_chrY_T0001004;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001004:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9921235	9923481	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001004;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001004;transcript_name=CHM13_chrY_T0001004;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001004:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9923482	9923583	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001004;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001004;transcript_name=CHM13_chrY_T0001004;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001004:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9923584	9923789	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001004;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001004;transcript_name=CHM13_chrY_T0001004;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001004:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9923790	9923902	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001004;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001004;transcript_name=CHM13_chrY_T0001004;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001004:3;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9923903	9929326	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001004;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001004;transcript_name=CHM13_chrY_T0001004;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001004:3;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9929327	9929416	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001004;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001004;transcript_name=CHM13_chrY_T0001004;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001004:4;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9929417	9941008	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001004;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001004;transcript_name=CHM13_chrY_T0001004;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001004:4;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9941009	9941046	.	-	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001004;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001004;transcript_name=CHM13_chrY_T0001004;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001004:5;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9928580	9932000	1000	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001006;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_G0000330;transcript_name=CHM13_chrY_T0001006;gene_name=ENSG00000309329;ID=CHM13_chrY_T0001006;Name=ENSG00000309329
CHM13_chrY	CAT	exon	9928580	9929096	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001006;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001006;transcript_name=CHM13_chrY_T0001006;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001006:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9929097	9929326	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001006;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001006;transcript_name=CHM13_chrY_T0001006;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001006:0;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9929327	9929416	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001006;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001006;transcript_name=CHM13_chrY_T0001006;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001006:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9929417	9931854	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001006;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001006;transcript_name=CHM13_chrY_T0001006;gene_name=ENSG00000309329;ID=intron:CHM13_chrY_T0001006:1;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9931855	9932000	.	-	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=CHM13_chrY_T0001006;gene_id=CHM13_chrY_G0000330;Parent=CHM13_chrY_T0001006;transcript_name=CHM13_chrY_T0001006;gene_name=ENSG00000309329;ID=exon:CHM13_chrY_T0001006:2;Name=ENSG00000309329;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9919271	9929976	.	-	.	source_gene_common_name=RBMY3AP;source_gene=ENSG00000231436.1;gene_id=CHM13_chrY_G0000331;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY3AP;gene_sources=liftoff;ID=CHM13_chrY_G0000331;Name=RBMY3AP
CHM13_chrY	CAT	transcript	9919271	9929976	1000	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_G0000331;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=CHM13_chrY_T0001005;Name=RBMY3AP
CHM13_chrY	CAT	exon	9919271	9919571	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=exon:CHM13_chrY_T0001005:0;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9919572	9919983	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=intron:CHM13_chrY_T0001005:0;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9919984	9920067	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=exon:CHM13_chrY_T0001005:1;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9920068	9920152	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=intron:CHM13_chrY_T0001005:1;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9920153	9920263	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=exon:CHM13_chrY_T0001005:2;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9920264	9921120	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=intron:CHM13_chrY_T0001005:2;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9921121	9921234	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=exon:CHM13_chrY_T0001005:3;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9921235	9923789	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=intron:CHM13_chrY_T0001005:3;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9923790	9923936	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=exon:CHM13_chrY_T0001005:4;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9923937	9925852	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=intron:CHM13_chrY_T0001005:4;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9925853	9926027	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=exon:CHM13_chrY_T0001005:5;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9926028	9929326	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=intron:CHM13_chrY_T0001005:5;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9929327	9929430	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=exon:CHM13_chrY_T0001005:6;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9929431	9929867	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=intron:CHM13_chrY_T0001005:6;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9929868	9929976	.	-	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=CHM13_chrY_T0001005;gene_id=CHM13_chrY_G0000331;Parent=CHM13_chrY_T0001005;transcript_name=CHM13_chrY_T0001005;gene_name=RBMY3AP;ID=exon:CHM13_chrY_T0001005:7;Name=RBMY3AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9932883	9935052	.	+	.	source_gene_common_name=TSPY25P;source_gene=ENSG00000234110.1;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;gene_id=CHM13_chrY_G0000332;gene_biotype=unprocessed_pseudogene;gene_name=TSPY25P;gene_sources=liftoff;ID=CHM13_chrY_G0000332;Name=TSPY25P
CHM13_chrY	CAT	transcript	9932883	9935052	1000	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=CHM13_chrY_T0001007;gene_id=CHM13_chrY_G0000332;Parent=CHM13_chrY_G0000332;transcript_name=CHM13_chrY_T0001007;gene_name=TSPY25P;ID=CHM13_chrY_T0001007;Name=TSPY25P
CHM13_chrY	CAT	exon	9932883	9933245	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=CHM13_chrY_T0001007;gene_id=CHM13_chrY_G0000332;Parent=CHM13_chrY_T0001007;transcript_name=CHM13_chrY_T0001007;gene_name=TSPY25P;ID=exon:CHM13_chrY_T0001007:0;Name=TSPY25P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9933246	9934269	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=CHM13_chrY_T0001007;gene_id=CHM13_chrY_G0000332;Parent=CHM13_chrY_T0001007;transcript_name=CHM13_chrY_T0001007;gene_name=TSPY25P;ID=intron:CHM13_chrY_T0001007:0;Name=TSPY25P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9934270	9934356	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=CHM13_chrY_T0001007;gene_id=CHM13_chrY_G0000332;Parent=CHM13_chrY_T0001007;transcript_name=CHM13_chrY_T0001007;gene_name=TSPY25P;ID=exon:CHM13_chrY_T0001007:1;Name=TSPY25P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9934357	9934561	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=CHM13_chrY_T0001007;gene_id=CHM13_chrY_G0000332;Parent=CHM13_chrY_T0001007;transcript_name=CHM13_chrY_T0001007;gene_name=TSPY25P;ID=intron:CHM13_chrY_T0001007:1;Name=TSPY25P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9934562	9934674	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=CHM13_chrY_T0001007;gene_id=CHM13_chrY_G0000332;Parent=CHM13_chrY_T0001007;transcript_name=CHM13_chrY_T0001007;gene_name=TSPY25P;ID=exon:CHM13_chrY_T0001007:2;Name=TSPY25P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9934675	9934760	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=CHM13_chrY_T0001007;gene_id=CHM13_chrY_G0000332;Parent=CHM13_chrY_T0001007;transcript_name=CHM13_chrY_T0001007;gene_name=TSPY25P;ID=intron:CHM13_chrY_T0001007:2;Name=TSPY25P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9934761	9934901	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=CHM13_chrY_T0001007;gene_id=CHM13_chrY_G0000332;Parent=CHM13_chrY_T0001007;transcript_name=CHM13_chrY_T0001007;gene_name=TSPY25P;ID=exon:CHM13_chrY_T0001007:3;Name=TSPY25P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9934902	9935011	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=CHM13_chrY_T0001007;gene_id=CHM13_chrY_G0000332;Parent=CHM13_chrY_T0001007;transcript_name=CHM13_chrY_T0001007;gene_name=TSPY25P;ID=intron:CHM13_chrY_T0001007:3;Name=TSPY25P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9935012	9935052	.	+	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1,ENST00000429463.1;transcript_id=CHM13_chrY_T0001007;gene_id=CHM13_chrY_G0000332;Parent=CHM13_chrY_T0001007;transcript_name=CHM13_chrY_T0001007;gene_name=TSPY25P;ID=exon:CHM13_chrY_T0001007:4;Name=TSPY25P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9948949	9949416	.	-	.	source_gene_common_name=TSPY16P;source_gene=ENSG00000226223.1;alternative_source_transcripts=ENST00000449843.1,ENST00000449843.1;gene_id=CHM13_chrY_G0000333;gene_biotype=unprocessed_pseudogene;gene_name=TSPY16P;gene_sources=liftoff;ID=CHM13_chrY_G0000333;Name=TSPY16P
CHM13_chrY	CAT	transcript	9948949	9949416	1000	-	.	source_transcript=ENST00000449843.1;source_transcript_name=TSPY16P-201;source_gene=ENSG00000226223.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226223.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449843.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY16P;alternative_source_transcripts=ENST00000449843.1,ENST00000449843.1;transcript_id=CHM13_chrY_T0001008;gene_id=CHM13_chrY_G0000333;Parent=CHM13_chrY_G0000333;transcript_name=CHM13_chrY_T0001008;gene_name=TSPY16P;ID=CHM13_chrY_T0001008;Name=TSPY16P
CHM13_chrY	CAT	exon	9948949	9949416	.	-	.	source_transcript=ENST00000449843.1;source_transcript_name=TSPY16P-201;source_gene=ENSG00000226223.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226223.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449843.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY16P;alternative_source_transcripts=ENST00000449843.1,ENST00000449843.1;transcript_id=CHM13_chrY_T0001008;gene_id=CHM13_chrY_G0000333;Parent=CHM13_chrY_T0001008;transcript_name=CHM13_chrY_T0001008;gene_name=TSPY16P;ID=exon:CHM13_chrY_T0001008:0;Name=TSPY16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9973936	9977717	.	+	.	source_gene_common_name=ENSG00000232617;source_gene=ENSG00000232617.1;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;gene_id=CHM13_chrY_G0000334;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000232617;gene_sources=liftoff;ID=CHM13_chrY_G0000334;Name=ENSG00000232617
CHM13_chrY	CAT	transcript	9973936	9977717	1000	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=CHM13_chrY_T0001009;gene_id=CHM13_chrY_G0000334;Parent=CHM13_chrY_G0000334;transcript_name=CHM13_chrY_T0001009;gene_name=ENSG00000232617;ID=CHM13_chrY_T0001009;Name=ENSG00000232617
CHM13_chrY	CAT	exon	9973936	9974108	.	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=CHM13_chrY_T0001009;gene_id=CHM13_chrY_G0000334;Parent=CHM13_chrY_T0001009;transcript_name=CHM13_chrY_T0001009;gene_name=ENSG00000232617;ID=exon:CHM13_chrY_T0001009:0;Name=ENSG00000232617;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9974109	9977629	.	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=CHM13_chrY_T0001009;gene_id=CHM13_chrY_G0000334;Parent=CHM13_chrY_T0001009;transcript_name=CHM13_chrY_T0001009;gene_name=ENSG00000232617;ID=intron:CHM13_chrY_T0001009:0;Name=ENSG00000232617;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	9977630	9977717	.	+	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1,ENST00000426129.1;transcript_id=CHM13_chrY_T0001009;gene_id=CHM13_chrY_G0000334;Parent=CHM13_chrY_T0001009;transcript_name=CHM13_chrY_T0001009;gene_name=ENSG00000232617;ID=exon:CHM13_chrY_T0001009:1;Name=ENSG00000232617;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	9999742	10010398	.	+	.	source_gene_common_name=TTTY8;source_gene=ENSG00000183385.10;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;gene_id=CHM13_chrY_G0000335;gene_biotype=lncRNA;gene_name=TTTY8;gene_sources=liftoff;ID=CHM13_chrY_G0000335;Name=TTTY8
CHM13_chrY	CAT	transcript	9999742	10002402	1000	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=CHM13_chrY_T0001010;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_G0000335;transcript_name=CHM13_chrY_T0001010;gene_name=TTTY8;ID=CHM13_chrY_T0001010;Name=TTTY8
CHM13_chrY	CAT	exon	9999742	9999781	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=CHM13_chrY_T0001010;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001010;transcript_name=CHM13_chrY_T0001010;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001010:0;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9999782	10000415	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=CHM13_chrY_T0001010;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001010;transcript_name=CHM13_chrY_T0001010;gene_name=TTTY8;ID=intron:CHM13_chrY_T0001010:0;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10000416	10000620	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=CHM13_chrY_T0001010;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001010;transcript_name=CHM13_chrY_T0001010;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001010:1;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10000621	10002212	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=CHM13_chrY_T0001010;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001010;transcript_name=CHM13_chrY_T0001010;gene_name=TTTY8;ID=intron:CHM13_chrY_T0001010:1;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10002213	10002402	.	+	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849217.1,ENST00000849217.1;transcript_id=CHM13_chrY_T0001010;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001010;transcript_name=CHM13_chrY_T0001010;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001010:2;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9999746	10010398	1000	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=CHM13_chrY_T0001011;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_G0000335;transcript_name=CHM13_chrY_T0001011;gene_name=TTTY8;ID=CHM13_chrY_T0001011;Name=TTTY8
CHM13_chrY	CAT	exon	9999746	9999938	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=CHM13_chrY_T0001011;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001011;transcript_name=CHM13_chrY_T0001011;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001011:0;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9999939	10000415	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=CHM13_chrY_T0001011;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001011;transcript_name=CHM13_chrY_T0001011;gene_name=TTTY8;ID=intron:CHM13_chrY_T0001011:0;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10000416	10000620	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=CHM13_chrY_T0001011;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001011;transcript_name=CHM13_chrY_T0001011;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001011:1;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10000621	10010147	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=CHM13_chrY_T0001011;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001011;transcript_name=CHM13_chrY_T0001011;gene_name=TTTY8;ID=intron:CHM13_chrY_T0001011:1;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10010148	10010398	.	+	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849214.1,ENST00000849214.1;transcript_id=CHM13_chrY_T0001011;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001011;transcript_name=CHM13_chrY_T0001011;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001011:2;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9999758	10010370	1000	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=CHM13_chrY_T0001012;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_G0000335;transcript_name=CHM13_chrY_T0001012;gene_name=TTTY8;ID=CHM13_chrY_T0001012;Name=TTTY8
CHM13_chrY	CAT	exon	9999758	9999781	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=CHM13_chrY_T0001012;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001012;transcript_name=CHM13_chrY_T0001012;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001012:0;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9999782	10000415	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=CHM13_chrY_T0001012;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001012;transcript_name=CHM13_chrY_T0001012;gene_name=TTTY8;ID=intron:CHM13_chrY_T0001012:0;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10000416	10000620	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=CHM13_chrY_T0001012;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001012;transcript_name=CHM13_chrY_T0001012;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001012:1;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10000621	10010147	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=CHM13_chrY_T0001012;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001012;transcript_name=CHM13_chrY_T0001012;gene_name=TTTY8;ID=intron:CHM13_chrY_T0001012:1;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10010148	10010370	.	+	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849215.1,ENST00000849215.1;transcript_id=CHM13_chrY_T0001012;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001012;transcript_name=CHM13_chrY_T0001012;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001012:2;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9999772	10002402	1000	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=CHM13_chrY_T0001013;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_G0000335;transcript_name=CHM13_chrY_T0001013;gene_name=TTTY8;ID=CHM13_chrY_T0001013;Name=TTTY8
CHM13_chrY	CAT	exon	9999772	9999938	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=CHM13_chrY_T0001013;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001013;transcript_name=CHM13_chrY_T0001013;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001013:0;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9999939	10000415	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=CHM13_chrY_T0001013;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001013;transcript_name=CHM13_chrY_T0001013;gene_name=TTTY8;ID=intron:CHM13_chrY_T0001013:0;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10000416	10000620	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=CHM13_chrY_T0001013;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001013;transcript_name=CHM13_chrY_T0001013;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001013:1;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10000621	10002212	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=CHM13_chrY_T0001013;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001013;transcript_name=CHM13_chrY_T0001013;gene_name=TTTY8;ID=intron:CHM13_chrY_T0001013:1;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10002213	10002402	.	+	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000329684.8,ENST00000329684.8;transcript_id=CHM13_chrY_T0001013;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001013;transcript_name=CHM13_chrY_T0001013;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001013:2;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9999778	10002660	1000	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=CHM13_chrY_T0001014;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_G0000335;transcript_name=CHM13_chrY_T0001014;gene_name=TTTY8;ID=CHM13_chrY_T0001014;Name=TTTY8
CHM13_chrY	CAT	exon	9999778	9999938	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=CHM13_chrY_T0001014;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001014;transcript_name=CHM13_chrY_T0001014;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001014:0;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9999939	10000415	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=CHM13_chrY_T0001014;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001014;transcript_name=CHM13_chrY_T0001014;gene_name=TTTY8;ID=intron:CHM13_chrY_T0001014:0;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10000416	10000620	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=CHM13_chrY_T0001014;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001014;transcript_name=CHM13_chrY_T0001014;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001014:1;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10000621	10002483	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=CHM13_chrY_T0001014;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001014;transcript_name=CHM13_chrY_T0001014;gene_name=TTTY8;ID=intron:CHM13_chrY_T0001014:1;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10002484	10002660	.	+	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=299.81600000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000426035.2,ENST00000426035.2;transcript_id=CHM13_chrY_T0001014;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001014;transcript_name=CHM13_chrY_T0001014;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001014:2;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	9999803	10002648	1000	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=CHM13_chrY_T0001015;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_G0000335;transcript_name=CHM13_chrY_T0001015;gene_name=TTTY8;ID=CHM13_chrY_T0001015;Name=TTTY8
CHM13_chrY	CAT	exon	9999803	9999938	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=CHM13_chrY_T0001015;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001015;transcript_name=CHM13_chrY_T0001015;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001015:0;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	9999939	10000419	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=CHM13_chrY_T0001015;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001015;transcript_name=CHM13_chrY_T0001015;gene_name=TTTY8;ID=intron:CHM13_chrY_T0001015:0;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10000420	10000620	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=CHM13_chrY_T0001015;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001015;transcript_name=CHM13_chrY_T0001015;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001015:1;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10000621	10002483	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=CHM13_chrY_T0001015;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001015;transcript_name=CHM13_chrY_T0001015;gene_name=TTTY8;ID=intron:CHM13_chrY_T0001015:1;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10002484	10002648	.	+	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=ENST00000849216.1,ENST00000849216.1;transcript_id=CHM13_chrY_T0001015;gene_id=CHM13_chrY_G0000335;Parent=CHM13_chrY_T0001015;transcript_name=CHM13_chrY_T0001015;gene_name=TTTY8;ID=exon:CHM13_chrY_T0001015:2;Name=TTTY8;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10015527	10032567	.	-	.	source_gene_common_name=TTTY7B;source_gene=ENSG00000147761.10;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;gene_id=CHM13_chrY_G0000336;gene_biotype=lncRNA;gene_name=TTTY7B;gene_sources=liftoff;ID=CHM13_chrY_G0000336;Name=TTTY7B
CHM13_chrY	CAT	transcript	10015527	10023965	1000	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=CHM13_chrY_T0001016;Name=TTTY7B
CHM13_chrY	CAT	exon	10015527	10015772	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001016;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001016:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10015773	10016018	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001016;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001016:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10016019	10016274	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001016;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001016:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10016275	10017247	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001016;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001016:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10017248	10017361	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001016;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001016:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10017362	10019278	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001016;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001016:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10019279	10019755	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001016;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001016:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10019756	10020443	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001016;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001016:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10020444	10020518	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001016;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001016:4;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10020519	10022825	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001016;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001016:4;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10022826	10022987	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001016;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001016:5;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022988	10023928	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001016;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001016:5;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10023929	10023965	.	-	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=299.927;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000276779.8,ENST00000276779.8;transcript_id=CHM13_chrY_T0001016;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001016;transcript_name=CHM13_chrY_T0001016;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001016:6;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10015527	10023965	1000	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=CHM13_chrY_T0001017;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001017;gene_name=TTTY7B;ID=CHM13_chrY_T0001017;Name=TTTY7B
CHM13_chrY	CAT	exon	10015527	10015772	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=CHM13_chrY_T0001017;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001017;transcript_name=CHM13_chrY_T0001017;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001017:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10015773	10017247	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=CHM13_chrY_T0001017;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001017;transcript_name=CHM13_chrY_T0001017;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001017:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10017248	10017361	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=CHM13_chrY_T0001017;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001017;transcript_name=CHM13_chrY_T0001017;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001017:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10017362	10019278	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=CHM13_chrY_T0001017;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001017;transcript_name=CHM13_chrY_T0001017;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001017:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10019279	10019755	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=CHM13_chrY_T0001017;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001017;transcript_name=CHM13_chrY_T0001017;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001017:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10019756	10020443	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=CHM13_chrY_T0001017;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001017;transcript_name=CHM13_chrY_T0001017;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001017:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10020444	10020518	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=CHM13_chrY_T0001017;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001017;transcript_name=CHM13_chrY_T0001017;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001017:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10020519	10022825	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=CHM13_chrY_T0001017;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001017;transcript_name=CHM13_chrY_T0001017;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001017:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10022826	10022987	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=CHM13_chrY_T0001017;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001017;transcript_name=CHM13_chrY_T0001017;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001017:4;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022988	10023928	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=CHM13_chrY_T0001017;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001017;transcript_name=CHM13_chrY_T0001017;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001017:4;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10023929	10023965	.	-	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=299.90999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000415405.1,ENST00000415405.1;transcript_id=CHM13_chrY_T0001017;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001017;transcript_name=CHM13_chrY_T0001017;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001017:5;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10015527	10019528	1000	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=299.859;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=CHM13_chrY_T0001018;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001018;gene_name=TTTY7B;ID=CHM13_chrY_T0001018;Name=TTTY7B
CHM13_chrY	CAT	exon	10015527	10015772	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=299.859;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=CHM13_chrY_T0001018;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001018;transcript_name=CHM13_chrY_T0001018;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001018:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10015773	10017247	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=299.859;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=CHM13_chrY_T0001018;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001018;transcript_name=CHM13_chrY_T0001018;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001018:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10017248	10017460	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=299.859;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=CHM13_chrY_T0001018;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001018;transcript_name=CHM13_chrY_T0001018;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001018:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10017461	10019278	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=299.859;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=CHM13_chrY_T0001018;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001018;transcript_name=CHM13_chrY_T0001018;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001018:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10019279	10019528	.	-	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=299.859;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000447655.5,ENST00000447655.5;transcript_id=CHM13_chrY_T0001018;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001018;transcript_name=CHM13_chrY_T0001018;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001018:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10015527	10030089	1000	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=CHM13_chrY_T0001019;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001019;gene_name=TTTY7B;ID=CHM13_chrY_T0001019;Name=TTTY7B
CHM13_chrY	CAT	exon	10015527	10015772	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=CHM13_chrY_T0001019;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001019;transcript_name=CHM13_chrY_T0001019;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001019:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10015773	10017247	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=CHM13_chrY_T0001019;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001019;transcript_name=CHM13_chrY_T0001019;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001019:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10017248	10017361	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=CHM13_chrY_T0001019;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001019;transcript_name=CHM13_chrY_T0001019;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001019:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10017362	10020443	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=CHM13_chrY_T0001019;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001019;transcript_name=CHM13_chrY_T0001019;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001019:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10020444	10020518	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=CHM13_chrY_T0001019;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001019;transcript_name=CHM13_chrY_T0001019;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001019:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10020519	10022825	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=CHM13_chrY_T0001019;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001019;transcript_name=CHM13_chrY_T0001019;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001019:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10022826	10022907	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=CHM13_chrY_T0001019;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001019;transcript_name=CHM13_chrY_T0001019;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001019:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022908	10029797	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=CHM13_chrY_T0001019;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001019;transcript_name=CHM13_chrY_T0001019;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001019:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10029798	10030089	.	-	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000715682.1,ENST00000715682.1;transcript_id=CHM13_chrY_T0001019;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001019;transcript_name=CHM13_chrY_T0001019;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001019:4;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10015527	10030089	1000	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=CHM13_chrY_T0001020;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001020;gene_name=TTTY7B;ID=CHM13_chrY_T0001020;Name=TTTY7B
CHM13_chrY	CAT	exon	10015527	10015772	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=CHM13_chrY_T0001020;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001020;transcript_name=CHM13_chrY_T0001020;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001020:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10015773	10017247	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=CHM13_chrY_T0001020;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001020;transcript_name=CHM13_chrY_T0001020;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001020:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10017248	10017361	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=CHM13_chrY_T0001020;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001020;transcript_name=CHM13_chrY_T0001020;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001020:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10017362	10020443	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=CHM13_chrY_T0001020;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001020;transcript_name=CHM13_chrY_T0001020;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001020:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10020444	10020518	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=CHM13_chrY_T0001020;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001020;transcript_name=CHM13_chrY_T0001020;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001020:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10020519	10022825	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=CHM13_chrY_T0001020;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001020;transcript_name=CHM13_chrY_T0001020;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001020:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10022826	10022907	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=CHM13_chrY_T0001020;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001020;transcript_name=CHM13_chrY_T0001020;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001020:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022908	10028515	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=CHM13_chrY_T0001020;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001020;transcript_name=CHM13_chrY_T0001020;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001020:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10028516	10028673	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=CHM13_chrY_T0001020;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001020;transcript_name=CHM13_chrY_T0001020;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001020:4;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10028674	10029797	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=CHM13_chrY_T0001020;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001020;transcript_name=CHM13_chrY_T0001020;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001020:4;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10029798	10030089	.	-	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=299.897;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757617.1,ENST00000757617.1;transcript_id=CHM13_chrY_T0001020;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001020;transcript_name=CHM13_chrY_T0001020;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001020:5;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10015527	10019580	1000	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=299.818;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=CHM13_chrY_T0001021;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001021;gene_name=TTTY7B;ID=CHM13_chrY_T0001021;Name=TTTY7B
CHM13_chrY	CAT	exon	10015527	10015772	.	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=299.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=CHM13_chrY_T0001021;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001021;transcript_name=CHM13_chrY_T0001021;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001021:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10015773	10019278	.	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=299.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=CHM13_chrY_T0001021;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001021;transcript_name=CHM13_chrY_T0001021;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001021:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10019279	10019580	.	-	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=299.818;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757627.1,ENST00000757627.1;transcript_id=CHM13_chrY_T0001021;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001021;transcript_name=CHM13_chrY_T0001021;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001021:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10015531	10027674	1000	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=CHM13_chrY_T0001022;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001022;gene_name=TTTY7B;ID=CHM13_chrY_T0001022;Name=TTTY7B
CHM13_chrY	CAT	exon	10015531	10015772	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=CHM13_chrY_T0001022;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001022;transcript_name=CHM13_chrY_T0001022;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001022:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10015773	10017247	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=CHM13_chrY_T0001022;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001022;transcript_name=CHM13_chrY_T0001022;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001022:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10017248	10017361	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=CHM13_chrY_T0001022;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001022;transcript_name=CHM13_chrY_T0001022;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001022:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10017362	10020443	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=CHM13_chrY_T0001022;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001022;transcript_name=CHM13_chrY_T0001022;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001022:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10020444	10020518	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=CHM13_chrY_T0001022;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001022;transcript_name=CHM13_chrY_T0001022;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001022:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10020519	10022825	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=CHM13_chrY_T0001022;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001022;transcript_name=CHM13_chrY_T0001022;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001022:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10022826	10022907	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=CHM13_chrY_T0001022;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001022;transcript_name=CHM13_chrY_T0001022;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001022:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022908	10027380	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=CHM13_chrY_T0001022;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001022;transcript_name=CHM13_chrY_T0001022;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001022:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10027381	10027674	.	-	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=299.876;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757618.1,ENST00000757618.1;transcript_id=CHM13_chrY_T0001022;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001022;transcript_name=CHM13_chrY_T0001022;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001022:4;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10022732	10030110	1000	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=CHM13_chrY_T0001023;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001023;gene_name=TTTY7B;ID=CHM13_chrY_T0001023;Name=TTTY7B
CHM13_chrY	CAT	exon	10022732	10022907	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=CHM13_chrY_T0001023;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001023;transcript_name=CHM13_chrY_T0001023;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001023:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022908	10028515	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=CHM13_chrY_T0001023;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001023;transcript_name=CHM13_chrY_T0001023;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001023:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10028516	10028673	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=CHM13_chrY_T0001023;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001023;transcript_name=CHM13_chrY_T0001023;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001023:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10028674	10029797	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=CHM13_chrY_T0001023;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001023;transcript_name=CHM13_chrY_T0001023;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001023:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10029798	10030110	.	-	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757621.1,ENST00000757621.1;transcript_id=CHM13_chrY_T0001023;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001023;transcript_name=CHM13_chrY_T0001023;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001023:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10022733	10030117	1000	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=CHM13_chrY_T0001024;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001024;gene_name=TTTY7B;ID=CHM13_chrY_T0001024;Name=TTTY7B
CHM13_chrY	CAT	exon	10022733	10022907	.	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=CHM13_chrY_T0001024;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001024;transcript_name=CHM13_chrY_T0001024;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001024:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022908	10029797	.	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=CHM13_chrY_T0001024;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001024;transcript_name=CHM13_chrY_T0001024;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001024:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10029798	10030117	.	-	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757620.1,ENST00000757620.1;transcript_id=CHM13_chrY_T0001024;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001024;transcript_name=CHM13_chrY_T0001024;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001024:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10022737	10030084	1000	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=CHM13_chrY_T0001025;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001025;gene_name=TTTY7B;ID=CHM13_chrY_T0001025;Name=TTTY7B
CHM13_chrY	CAT	exon	10022737	10022907	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=CHM13_chrY_T0001025;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001025;transcript_name=CHM13_chrY_T0001025;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001025:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022908	10025823	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=CHM13_chrY_T0001025;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001025;transcript_name=CHM13_chrY_T0001025;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001025:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10025824	10025930	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=CHM13_chrY_T0001025;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001025;transcript_name=CHM13_chrY_T0001025;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001025:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10025931	10026326	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=CHM13_chrY_T0001025;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001025;transcript_name=CHM13_chrY_T0001025;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001025:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10026327	10026460	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=CHM13_chrY_T0001025;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001025;transcript_name=CHM13_chrY_T0001025;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001025:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10026461	10029797	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=CHM13_chrY_T0001025;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001025;transcript_name=CHM13_chrY_T0001025;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001025:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10029798	10030084	.	-	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757623.1,ENST00000757623.1;transcript_id=CHM13_chrY_T0001025;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001025;transcript_name=CHM13_chrY_T0001025;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001025:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10022738	10030088	1000	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=CHM13_chrY_T0001026;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001026;gene_name=TTTY7B;ID=CHM13_chrY_T0001026;Name=TTTY7B
CHM13_chrY	CAT	exon	10022738	10022907	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=CHM13_chrY_T0001026;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001026;transcript_name=CHM13_chrY_T0001026;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001026:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022908	10025823	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=CHM13_chrY_T0001026;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001026;transcript_name=CHM13_chrY_T0001026;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001026:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10025824	10025930	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=CHM13_chrY_T0001026;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001026;transcript_name=CHM13_chrY_T0001026;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001026:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10025931	10026326	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=CHM13_chrY_T0001026;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001026;transcript_name=CHM13_chrY_T0001026;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001026:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10026327	10026460	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=CHM13_chrY_T0001026;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001026;transcript_name=CHM13_chrY_T0001026;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001026:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10026461	10028515	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=CHM13_chrY_T0001026;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001026;transcript_name=CHM13_chrY_T0001026;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001026:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10028516	10028673	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=CHM13_chrY_T0001026;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001026;transcript_name=CHM13_chrY_T0001026;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001026:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10028674	10029797	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=CHM13_chrY_T0001026;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001026;transcript_name=CHM13_chrY_T0001026;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001026:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10029798	10030088	.	-	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757622.1,ENST00000757622.1;transcript_id=CHM13_chrY_T0001026;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001026;transcript_name=CHM13_chrY_T0001026;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001026:4;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10022739	10030097	1000	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=CHM13_chrY_T0001027;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001027;gene_name=TTTY7B;ID=CHM13_chrY_T0001027;Name=TTTY7B
CHM13_chrY	CAT	exon	10022739	10022907	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=CHM13_chrY_T0001027;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001027;transcript_name=CHM13_chrY_T0001027;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001027:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022908	10026326	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=CHM13_chrY_T0001027;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001027;transcript_name=CHM13_chrY_T0001027;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001027:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10026327	10026460	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=CHM13_chrY_T0001027;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001027;transcript_name=CHM13_chrY_T0001027;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001027:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10026461	10029797	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=CHM13_chrY_T0001027;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001027;transcript_name=CHM13_chrY_T0001027;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001027:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10029798	10030097	.	-	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000430228.2,ENST00000430228.2;transcript_id=CHM13_chrY_T0001027;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001027;transcript_name=CHM13_chrY_T0001027;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001027:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10022742	10030063	1000	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=CHM13_chrY_T0001028;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001028;gene_name=TTTY7B;ID=CHM13_chrY_T0001028;Name=TTTY7B
CHM13_chrY	CAT	exon	10022742	10022907	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=CHM13_chrY_T0001028;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001028;transcript_name=CHM13_chrY_T0001028;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001028:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022908	10026326	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=CHM13_chrY_T0001028;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001028;transcript_name=CHM13_chrY_T0001028;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001028:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10026327	10026460	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=CHM13_chrY_T0001028;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001028;transcript_name=CHM13_chrY_T0001028;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001028:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10026461	10028515	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=CHM13_chrY_T0001028;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001028;transcript_name=CHM13_chrY_T0001028;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001028:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10028516	10028673	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=CHM13_chrY_T0001028;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001028;transcript_name=CHM13_chrY_T0001028;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001028:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10028674	10029797	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=CHM13_chrY_T0001028;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001028;transcript_name=CHM13_chrY_T0001028;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001028:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10029798	10030063	.	-	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757625.1,ENST00000757625.1;transcript_id=CHM13_chrY_T0001028;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001028;transcript_name=CHM13_chrY_T0001028;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001028:3;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10022744	10030084	1000	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=CHM13_chrY_T0001029;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001029;gene_name=TTTY7B;ID=CHM13_chrY_T0001029;Name=TTTY7B
CHM13_chrY	CAT	exon	10022744	10022907	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=CHM13_chrY_T0001029;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001029;transcript_name=CHM13_chrY_T0001029;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001029:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022908	10025823	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=CHM13_chrY_T0001029;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001029;transcript_name=CHM13_chrY_T0001029;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001029:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10025824	10025930	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=CHM13_chrY_T0001029;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001029;transcript_name=CHM13_chrY_T0001029;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001029:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10025931	10029797	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=CHM13_chrY_T0001029;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001029;transcript_name=CHM13_chrY_T0001029;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001029:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10029798	10030084	.	-	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757624.1,ENST00000757624.1;transcript_id=CHM13_chrY_T0001029;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001029;transcript_name=CHM13_chrY_T0001029;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001029:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10022745	10032567	1000	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=CHM13_chrY_T0001030;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001030;gene_name=TTTY7B;ID=CHM13_chrY_T0001030;Name=TTTY7B
CHM13_chrY	CAT	exon	10022745	10022907	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=CHM13_chrY_T0001030;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001030;transcript_name=CHM13_chrY_T0001030;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001030:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022908	10028515	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=CHM13_chrY_T0001030;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001030;transcript_name=CHM13_chrY_T0001030;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001030:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10028516	10028673	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=CHM13_chrY_T0001030;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001030;transcript_name=CHM13_chrY_T0001030;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001030:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10028674	10032314	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=CHM13_chrY_T0001030;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001030;transcript_name=CHM13_chrY_T0001030;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001030:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10032315	10032567	.	-	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757619.1,ENST00000757619.1;transcript_id=CHM13_chrY_T0001030;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001030;transcript_name=CHM13_chrY_T0001030;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001030:2;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10022745	10027682	1000	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=CHM13_chrY_T0001031;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001031;gene_name=TTTY7B;ID=CHM13_chrY_T0001031;Name=TTTY7B
CHM13_chrY	CAT	exon	10022745	10022907	.	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=CHM13_chrY_T0001031;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001031;transcript_name=CHM13_chrY_T0001031;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001031:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022908	10027380	.	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=CHM13_chrY_T0001031;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001031;transcript_name=CHM13_chrY_T0001031;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001031:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10027381	10027682	.	-	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757626.1,ENST00000757626.1;transcript_id=CHM13_chrY_T0001031;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001031;transcript_name=CHM13_chrY_T0001031;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001031:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10022745	10024423	1000	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=CHM13_chrY_T0001032;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001032;gene_name=TTTY7B;ID=CHM13_chrY_T0001032;Name=TTTY7B
CHM13_chrY	CAT	exon	10022745	10022907	.	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=CHM13_chrY_T0001032;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001032;transcript_name=CHM13_chrY_T0001032;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001032:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10022908	10023482	.	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=CHM13_chrY_T0001032;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001032;transcript_name=CHM13_chrY_T0001032;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001032:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10023483	10024423	.	-	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757629.1,ENST00000757629.1;transcript_id=CHM13_chrY_T0001032;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001032;transcript_name=CHM13_chrY_T0001032;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001032:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10026290	10030063	1000	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=CHM13_chrY_T0001034;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_G0000336;transcript_name=CHM13_chrY_T0001034;gene_name=TTTY7B;ID=CHM13_chrY_T0001034;Name=TTTY7B
CHM13_chrY	CAT	exon	10026290	10026460	.	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=CHM13_chrY_T0001034;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001034;transcript_name=CHM13_chrY_T0001034;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001034:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10026461	10029797	.	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=CHM13_chrY_T0001034;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001034;transcript_name=CHM13_chrY_T0001034;gene_name=TTTY7B;ID=intron:CHM13_chrY_T0001034:0;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10029798	10030063	.	-	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=ENST00000757628.1,ENST00000757628.1;transcript_id=CHM13_chrY_T0001034;gene_id=CHM13_chrY_G0000336;Parent=CHM13_chrY_T0001034;transcript_name=CHM13_chrY_T0001034;gene_name=TTTY7B;ID=exon:CHM13_chrY_T0001034:1;Name=TTTY7B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10025865	10067375	.	+	.	source_gene_common_name=TTTY2;source_gene=ENSG00000212855.6;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;gene_id=CHM13_chrY_G0000337;gene_biotype=lncRNA;gene_name=TTTY2;gene_sources=liftoff;ID=CHM13_chrY_G0000337;Name=TTTY2
CHM13_chrY	CAT	transcript	10025865	10067023	1000	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=CHM13_chrY_T0001033;Name=TTTY2
CHM13_chrY	CAT	exon	10025865	10026050	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001033:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10026051	10027080	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001033:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10027081	10027987	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001033:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10027988	10051027	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001033:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10051028	10051105	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001033:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10051106	10061062	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001033:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061211	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001033:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061212	10061903	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001033:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001033:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10064890	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001033:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10064891	10064969	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001033:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10064970	10065089	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001033:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001033:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001033:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10067023	.	+	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=299.956;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1,ENST00000757459.1;transcript_id=CHM13_chrY_T0001033;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001033;transcript_name=CHM13_chrY_T0001033;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001033:7;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10027771	10067190	1000	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=CHM13_chrY_T0001035;Name=TTTY2
CHM13_chrY	CAT	exon	10027771	10027987	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001035:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10027988	10044291	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001035:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10044292	10044502	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001035:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10044503	10051027	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001035:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10051028	10051105	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001035:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10051106	10061062	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001035:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061211	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001035:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061212	10061903	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001035:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001035:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10064890	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001035:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10064891	10064969	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001035:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10064970	10065089	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001035:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001035:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001035:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10067190	.	+	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1,ENST00000757461.1;transcript_id=CHM13_chrY_T0001035;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001035;transcript_name=CHM13_chrY_T0001035;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001035:7;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10027787	10067375	1000	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=CHM13_chrY_T0001036;Name=TTTY2
CHM13_chrY	CAT	exon	10027787	10027987	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001036:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10027988	10044029	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001036:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10044030	10044117	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001036:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10044118	10044291	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001036:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10044292	10044502	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001036:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10044503	10051027	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001036:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10051028	10051105	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001036:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10051106	10053125	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001036:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10053126	10053230	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001036:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10053231	10053581	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001036:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10053582	10053668	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001036:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10053669	10061062	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001036:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061290	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001036:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061291	10061903	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001036:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001036:7;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10065089	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001036:7;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001036:8;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001036:8;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10067375	.	+	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1,ENST00000757460.1;transcript_id=CHM13_chrY_T0001036;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001036;transcript_name=CHM13_chrY_T0001036;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001036:9;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10030218	10067187	1000	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=CHM13_chrY_T0001037;Name=TTTY2
CHM13_chrY	CAT	exon	10030218	10030402	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001037:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10030403	10044029	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001037:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10044030	10044117	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001037:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10044118	10044291	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001037:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10044292	10044502	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001037:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10044503	10051027	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001037:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10051028	10051105	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001037:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10051106	10061062	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001037:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061211	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001037:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061212	10061903	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001037:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001037:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10065089	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001037:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001037:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001037:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10067187	.	+	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1,ENST00000757462.1;transcript_id=CHM13_chrY_T0001037;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001037;transcript_name=CHM13_chrY_T0001037;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001037:7;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10044982	10067375	1000	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=CHM13_chrY_T0001038;Name=TTTY2
CHM13_chrY	CAT	exon	10044982	10045193	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001038:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10045194	10051027	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001038:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10051028	10051105	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001038:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10051106	10053125	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001038:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10053126	10053230	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001038:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10053231	10053581	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001038:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10053582	10053668	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001038:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10053669	10061062	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001038:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061211	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001038:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061212	10061903	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001038:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001038:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10065089	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001038:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001038:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001038:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10067375	.	+	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1,ENST00000757463.1;transcript_id=CHM13_chrY_T0001038;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001038;transcript_name=CHM13_chrY_T0001038;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001038:7;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10044983	10067375	1000	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=CHM13_chrY_T0001039;Name=TTTY2
CHM13_chrY	CAT	exon	10044983	10045187	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001039:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10045188	10051027	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001039:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10051028	10051105	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001039:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10051106	10061062	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001039:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061290	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001039:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061291	10061903	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001039:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001039:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10062581	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001039:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10062582	10062676	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001039:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062677	10063039	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001039:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10063040	10063257	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001039:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10063258	10064890	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001039:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10064891	10064969	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001039:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10064970	10065089	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001039:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001039:7;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001039:7;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10067375	.	+	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1,ENST00000757464.1;transcript_id=CHM13_chrY_T0001039;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001039;transcript_name=CHM13_chrY_T0001039;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001039:8;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10044983	10067375	1000	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=CHM13_chrY_T0001040;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001040;gene_name=TTTY2;ID=CHM13_chrY_T0001040;Name=TTTY2
CHM13_chrY	CAT	exon	10044983	10045193	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=CHM13_chrY_T0001040;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001040;transcript_name=CHM13_chrY_T0001040;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001040:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10045194	10051027	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=CHM13_chrY_T0001040;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001040;transcript_name=CHM13_chrY_T0001040;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001040:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10051028	10051105	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=CHM13_chrY_T0001040;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001040;transcript_name=CHM13_chrY_T0001040;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001040:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10051106	10061062	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=CHM13_chrY_T0001040;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001040;transcript_name=CHM13_chrY_T0001040;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001040:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061211	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=CHM13_chrY_T0001040;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001040;transcript_name=CHM13_chrY_T0001040;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001040:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061212	10061903	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=CHM13_chrY_T0001040;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001040;transcript_name=CHM13_chrY_T0001040;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001040:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=CHM13_chrY_T0001040;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001040;transcript_name=CHM13_chrY_T0001040;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001040:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10065089	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=CHM13_chrY_T0001040;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001040;transcript_name=CHM13_chrY_T0001040;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001040:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=CHM13_chrY_T0001040;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001040;transcript_name=CHM13_chrY_T0001040;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001040:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=CHM13_chrY_T0001040;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001040;transcript_name=CHM13_chrY_T0001040;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001040:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10067375	.	+	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1,ENST00000757465.1;transcript_id=CHM13_chrY_T0001040;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001040;transcript_name=CHM13_chrY_T0001040;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001040:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10044995	10067375	1000	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=CHM13_chrY_T0001041;Name=TTTY2
CHM13_chrY	CAT	exon	10044995	10045193	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001041:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10045194	10051027	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001041:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10051028	10051105	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001041:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10051106	10053581	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001041:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10053582	10053668	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001041:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10053669	10061062	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001041:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061211	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001041:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061212	10061903	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001041:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001041:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10064890	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001041:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10064891	10064969	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001041:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10064970	10065089	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001041:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001041:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001041:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10067375	.	+	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1,ENST00000757466.1;transcript_id=CHM13_chrY_T0001041;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001041;transcript_name=CHM13_chrY_T0001041;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001041:7;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10044995	10067186	1000	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=CHM13_chrY_T0001042;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001042;gene_name=TTTY2;ID=CHM13_chrY_T0001042;Name=TTTY2
CHM13_chrY	CAT	exon	10044995	10045193	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=CHM13_chrY_T0001042;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001042;transcript_name=CHM13_chrY_T0001042;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001042:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10045194	10051027	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=CHM13_chrY_T0001042;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001042;transcript_name=CHM13_chrY_T0001042;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001042:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10051028	10051105	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=CHM13_chrY_T0001042;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001042;transcript_name=CHM13_chrY_T0001042;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001042:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10051106	10061062	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=CHM13_chrY_T0001042;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001042;transcript_name=CHM13_chrY_T0001042;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001042:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061290	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=CHM13_chrY_T0001042;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001042;transcript_name=CHM13_chrY_T0001042;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001042:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061291	10061903	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=CHM13_chrY_T0001042;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001042;transcript_name=CHM13_chrY_T0001042;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001042:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=CHM13_chrY_T0001042;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001042;transcript_name=CHM13_chrY_T0001042;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001042:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10065089	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=CHM13_chrY_T0001042;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001042;transcript_name=CHM13_chrY_T0001042;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001042:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=CHM13_chrY_T0001042;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001042;transcript_name=CHM13_chrY_T0001042;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001042:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=CHM13_chrY_T0001042;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001042;transcript_name=CHM13_chrY_T0001042;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001042:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10067186	.	+	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1,ENST00000757467.1;transcript_id=CHM13_chrY_T0001042;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001042;transcript_name=CHM13_chrY_T0001042;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001042:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10045004	10066655	1000	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=CHM13_chrY_T0001043;Name=TTTY2
CHM13_chrY	CAT	exon	10045004	10045193	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001043;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001043:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10045194	10051027	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001043;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001043:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10051028	10051105	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001043;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001043:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10051106	10053581	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001043;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001043:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10053582	10053668	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001043;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001043:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10053669	10061062	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001043;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001043:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061290	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001043;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001043:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061291	10061903	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001043;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001043:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001043;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001043:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10065089	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001043;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001043:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001043;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001043:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001043;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001043:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10066655	.	+	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1,ENST00000757468.1;transcript_id=CHM13_chrY_T0001043;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001043;transcript_name=CHM13_chrY_T0001043;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001043:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10049288	10067190	1000	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=CHM13_chrY_T0001044;Name=TTTY2
CHM13_chrY	CAT	exon	10049288	10051105	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001044;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001044:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10051106	10053581	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001044;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001044:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10053582	10053668	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001044;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001044:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10053669	10061062	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001044;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001044:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061211	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001044;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001044:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061212	10061903	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001044;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001044:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001044;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001044:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10064890	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001044;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001044:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10064891	10064969	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001044;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001044:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10064970	10065089	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001044;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001044:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001044;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001044:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001044;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001044:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10067190	.	+	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000417072.1,ENST00000417072.1;transcript_id=CHM13_chrY_T0001044;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001044;transcript_name=CHM13_chrY_T0001044;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001044:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10058807	10062151	1000	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=CHM13_chrY_T0001045;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001045;gene_name=TTTY2;ID=CHM13_chrY_T0001045;Name=TTTY2
CHM13_chrY	CAT	exon	10058807	10058950	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=CHM13_chrY_T0001045;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001045;transcript_name=CHM13_chrY_T0001045;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001045:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10058951	10060683	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=CHM13_chrY_T0001045;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001045;transcript_name=CHM13_chrY_T0001045;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001045:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10060684	10060770	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=CHM13_chrY_T0001045;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001045;transcript_name=CHM13_chrY_T0001045;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001045:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10060771	10061062	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=CHM13_chrY_T0001045;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001045;transcript_name=CHM13_chrY_T0001045;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001045:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061211	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=CHM13_chrY_T0001045;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001045;transcript_name=CHM13_chrY_T0001045;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001045:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061212	10061903	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=CHM13_chrY_T0001045;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001045;transcript_name=CHM13_chrY_T0001045;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001045:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062151	.	+	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757472.1,ENST00000757472.1;transcript_id=CHM13_chrY_T0001045;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001045;transcript_name=CHM13_chrY_T0001045;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001045:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10058814	10067375	1000	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=CHM13_chrY_T0001046;Name=TTTY2
CHM13_chrY	CAT	exon	10058814	10058950	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001046:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10058951	10060683	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001046:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10060684	10060770	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001046:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10060771	10061062	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001046:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061211	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001046:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061212	10061903	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001046:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001046:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10063039	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001046:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10063040	10063257	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001046:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10063258	10064890	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001046:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10064891	10064969	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001046:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10064970	10065089	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001046:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001046:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001046:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10067375	.	+	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757469.1,ENST00000757469.1;transcript_id=CHM13_chrY_T0001046;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001046;transcript_name=CHM13_chrY_T0001046;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001046:7;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10058817	10066657	1000	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=CHM13_chrY_T0001047;Name=TTTY2
CHM13_chrY	CAT	exon	10058817	10058944	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001047;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001047:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10058945	10060683	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001047;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001047:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10060684	10060770	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001047;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001047:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10060771	10061062	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001047;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001047:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061211	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001047;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001047:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061212	10061903	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001047;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001047:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001047;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001047:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10064890	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001047;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001047:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10064891	10064969	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001047;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001047:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10064970	10065089	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001047;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001047:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001047;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001047:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001047;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001047:5;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10066657	.	+	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757471.1,ENST00000757471.1;transcript_id=CHM13_chrY_T0001047;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001047;transcript_name=CHM13_chrY_T0001047;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001047:6;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10058824	10067186	1000	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=CHM13_chrY_T0001048;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_G0000337;transcript_name=CHM13_chrY_T0001048;gene_name=TTTY2;ID=CHM13_chrY_T0001048;Name=TTTY2
CHM13_chrY	CAT	exon	10058824	10058950	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=CHM13_chrY_T0001048;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001048;transcript_name=CHM13_chrY_T0001048;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001048:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10058951	10061062	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=CHM13_chrY_T0001048;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001048;transcript_name=CHM13_chrY_T0001048;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001048:0;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061063	10061211	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=CHM13_chrY_T0001048;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001048;transcript_name=CHM13_chrY_T0001048;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001048:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10061212	10061903	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=CHM13_chrY_T0001048;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001048;transcript_name=CHM13_chrY_T0001048;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001048:1;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10061904	10062060	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=CHM13_chrY_T0001048;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001048;transcript_name=CHM13_chrY_T0001048;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001048:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062061	10065089	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=CHM13_chrY_T0001048;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001048;transcript_name=CHM13_chrY_T0001048;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001048:2;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10065090	10065287	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=CHM13_chrY_T0001048;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001048;transcript_name=CHM13_chrY_T0001048;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001048:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10065288	10066510	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=CHM13_chrY_T0001048;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001048;transcript_name=CHM13_chrY_T0001048;gene_name=TTTY2;ID=intron:CHM13_chrY_T0001048:3;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10066511	10067186	.	+	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757470.1,ENST00000757470.1;transcript_id=CHM13_chrY_T0001048;gene_id=CHM13_chrY_G0000337;Parent=CHM13_chrY_T0001048;transcript_name=CHM13_chrY_T0001048;gene_name=TTTY2;ID=exon:CHM13_chrY_T0001048:4;Name=TTTY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10061870	10083046	.	-	.	source_gene_common_name=TTTY1B;source_gene=ENSG00000129816.6;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;gene_id=CHM13_chrY_G0000338;gene_biotype=lncRNA;gene_name=TTTY1B;gene_sources=liftoff;ID=CHM13_chrY_G0000338;Name=TTTY1B
CHM13_chrY	CAT	transcript	10061870	10083005	1000	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=CHM13_chrY_T0001049;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_G0000338;transcript_name=CHM13_chrY_T0001049;gene_name=TTTY1B;ID=CHM13_chrY_T0001049;Name=TTTY1B
CHM13_chrY	CAT	exon	10061870	10062127	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=CHM13_chrY_T0001049;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001049;transcript_name=CHM13_chrY_T0001049;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001049:0;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062128	10069708	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=CHM13_chrY_T0001049;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001049;transcript_name=CHM13_chrY_T0001049;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001049:0;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10069709	10069846	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=CHM13_chrY_T0001049;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001049;transcript_name=CHM13_chrY_T0001049;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001049:1;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10069847	10072202	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=CHM13_chrY_T0001049;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001049;transcript_name=CHM13_chrY_T0001049;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001049:1;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10072203	10072311	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=CHM13_chrY_T0001049;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001049;transcript_name=CHM13_chrY_T0001049;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001049:2;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10072312	10079176	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=CHM13_chrY_T0001049;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001049;transcript_name=CHM13_chrY_T0001049;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001049:2;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10079177	10079336	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=CHM13_chrY_T0001049;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001049;transcript_name=CHM13_chrY_T0001049;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001049:3;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10079337	10082760	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=CHM13_chrY_T0001049;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001049;transcript_name=CHM13_chrY_T0001049;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001049:3;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10082761	10083005	.	-	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=ENST00000250805.5,ENST00000250805.5;transcript_id=CHM13_chrY_T0001049;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001049;transcript_name=CHM13_chrY_T0001049;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001049:4;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10061870	10083018	1000	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001050;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_G0000338;transcript_name=CHM13_chrY_T0001050;gene_name=TTTY1B;ID=CHM13_chrY_T0001050;Name=TTTY1B
CHM13_chrY	CAT	exon	10061870	10062127	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001050;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001050;transcript_name=CHM13_chrY_T0001050;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001050:0;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10062128	10064457	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001050;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001050;transcript_name=CHM13_chrY_T0001050;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001050:0;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10064458	10064601	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001050;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001050;transcript_name=CHM13_chrY_T0001050;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001050:1;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10064602	10069708	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001050;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001050;transcript_name=CHM13_chrY_T0001050;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001050:1;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10069709	10069846	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001050;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001050;transcript_name=CHM13_chrY_T0001050;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001050:2;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10069847	10070494	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001050;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001050;transcript_name=CHM13_chrY_T0001050;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001050:2;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10070495	10070581	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001050;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001050;transcript_name=CHM13_chrY_T0001050;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001050:3;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10070582	10072152	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001050;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001050;transcript_name=CHM13_chrY_T0001050;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001050:3;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10072153	10072311	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001050;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001050;transcript_name=CHM13_chrY_T0001050;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001050:4;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10072312	10082760	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001050;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001050;transcript_name=CHM13_chrY_T0001050;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001050:4;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10082761	10083018	.	-	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001050;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001050;transcript_name=CHM13_chrY_T0001050;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001050:5;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10067863	10083018	1000	-	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001051;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_G0000338;transcript_name=CHM13_chrY_T0001051;gene_name=TTTY1B;ID=CHM13_chrY_T0001051;Name=TTTY1B
CHM13_chrY	CAT	exon	10067863	10068027	.	-	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001051;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001051;transcript_name=CHM13_chrY_T0001051;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001051:0;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10068028	10072152	.	-	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001051;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001051;transcript_name=CHM13_chrY_T0001051;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001051:0;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10072153	10072311	.	-	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001051;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001051;transcript_name=CHM13_chrY_T0001051;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001051:1;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10072312	10082760	.	-	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001051;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001051;transcript_name=CHM13_chrY_T0001051;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001051:1;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10082761	10083018	.	-	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001051;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001051;transcript_name=CHM13_chrY_T0001051;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001051:2;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10067870	10083046	1000	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001052;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_G0000338;transcript_name=CHM13_chrY_T0001052;gene_name=TTTY1B;ID=CHM13_chrY_T0001052;Name=TTTY1B
CHM13_chrY	CAT	exon	10067870	10068027	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001052;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001052;transcript_name=CHM13_chrY_T0001052;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001052:0;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10068028	10072152	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001052;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001052;transcript_name=CHM13_chrY_T0001052;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001052:0;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10072153	10072311	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001052;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001052;transcript_name=CHM13_chrY_T0001052;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001052:1;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10072312	10079176	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001052;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001052;transcript_name=CHM13_chrY_T0001052;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001052:1;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10079177	10079336	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001052;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001052;transcript_name=CHM13_chrY_T0001052;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001052:2;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10079337	10082760	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001052;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001052;transcript_name=CHM13_chrY_T0001052;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001052:2;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10082761	10083046	.	-	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001052;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001052;transcript_name=CHM13_chrY_T0001052;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001052:3;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10076727	10083000	1000	-	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001053;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_G0000338;transcript_name=CHM13_chrY_T0001053;gene_name=TTTY1B;ID=CHM13_chrY_T0001053;Name=TTTY1B
CHM13_chrY	CAT	exon	10076727	10076974	.	-	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001053;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001053;transcript_name=CHM13_chrY_T0001053;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001053:0;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10076975	10082760	.	-	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001053;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001053;transcript_name=CHM13_chrY_T0001053;gene_name=TTTY1B;ID=intron:CHM13_chrY_T0001053:0;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10082761	10083000	.	-	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=CHM13_chrY_T0001053;gene_id=CHM13_chrY_G0000338;Parent=CHM13_chrY_T0001053;transcript_name=CHM13_chrY_T0001053;gene_name=TTTY1B;ID=exon:CHM13_chrY_T0001053:1;Name=TTTY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10092303	10098792	.	+	.	source_gene_common_name=ENSG00000303345;source_gene=ENSG00000303345.1;gene_id=CHM13_chrY_G0000339;gene_biotype=lncRNA;gene_name=ENSG00000303345;gene_sources=liftoff;ID=CHM13_chrY_G0000339;Name=ENSG00000303345
CHM13_chrY	CAT	transcript	10092303	10098792	1000	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=CHM13_chrY_T0001054;gene_id=CHM13_chrY_G0000339;Parent=CHM13_chrY_G0000339;transcript_name=CHM13_chrY_T0001054;gene_name=ENSG00000303345;ID=CHM13_chrY_T0001054;Name=ENSG00000303345
CHM13_chrY	CAT	exon	10092303	10092358	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=CHM13_chrY_T0001054;gene_id=CHM13_chrY_G0000339;Parent=CHM13_chrY_T0001054;transcript_name=CHM13_chrY_T0001054;gene_name=ENSG00000303345;ID=exon:CHM13_chrY_T0001054:0;Name=ENSG00000303345;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10092359	10092561	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=CHM13_chrY_T0001054;gene_id=CHM13_chrY_G0000339;Parent=CHM13_chrY_T0001054;transcript_name=CHM13_chrY_T0001054;gene_name=ENSG00000303345;ID=intron:CHM13_chrY_T0001054:0;Name=ENSG00000303345;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10092562	10092648	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=CHM13_chrY_T0001054;gene_id=CHM13_chrY_G0000339;Parent=CHM13_chrY_T0001054;transcript_name=CHM13_chrY_T0001054;gene_name=ENSG00000303345;ID=exon:CHM13_chrY_T0001054:1;Name=ENSG00000303345;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10092649	10096011	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=CHM13_chrY_T0001054;gene_id=CHM13_chrY_G0000339;Parent=CHM13_chrY_T0001054;transcript_name=CHM13_chrY_T0001054;gene_name=ENSG00000303345;ID=intron:CHM13_chrY_T0001054:1;Name=ENSG00000303345;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10096012	10096167	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=CHM13_chrY_T0001054;gene_id=CHM13_chrY_G0000339;Parent=CHM13_chrY_T0001054;transcript_name=CHM13_chrY_T0001054;gene_name=ENSG00000303345;ID=exon:CHM13_chrY_T0001054:2;Name=ENSG00000303345;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10096168	10098408	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=CHM13_chrY_T0001054;gene_id=CHM13_chrY_G0000339;Parent=CHM13_chrY_T0001054;transcript_name=CHM13_chrY_T0001054;gene_name=ENSG00000303345;ID=intron:CHM13_chrY_T0001054:2;Name=ENSG00000303345;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10098409	10098792	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;transcript_id=CHM13_chrY_T0001054;gene_id=CHM13_chrY_G0000339;Parent=CHM13_chrY_T0001054;transcript_name=CHM13_chrY_T0001054;gene_name=ENSG00000303345;ID=exon:CHM13_chrY_T0001054:3;Name=ENSG00000303345;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10103516	10116227	.	+	.	source_gene_common_name=LINC00280;source_gene=ENSG00000229643.2;gene_id=CHM13_chrY_G0000340;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=CHM13_chrY_G0000340;Name=LINC00280
CHM13_chrY	CAT	transcript	10103516	10112876	1000	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001055;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_G0000340;transcript_name=CHM13_chrY_T0001055;gene_name=LINC00280;ID=CHM13_chrY_T0001055;Name=LINC00280
CHM13_chrY	CAT	exon	10103516	10103684	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001055;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_T0001055;transcript_name=CHM13_chrY_T0001055;gene_name=LINC00280;ID=exon:CHM13_chrY_T0001055:0;Name=LINC00280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10103685	10104060	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001055;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_T0001055;transcript_name=CHM13_chrY_T0001055;gene_name=LINC00280;ID=intron:CHM13_chrY_T0001055:0;Name=LINC00280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10104061	10104133	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001055;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_T0001055;transcript_name=CHM13_chrY_T0001055;gene_name=LINC00280;ID=exon:CHM13_chrY_T0001055:1;Name=LINC00280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10104134	10106674	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001055;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_T0001055;transcript_name=CHM13_chrY_T0001055;gene_name=LINC00280;ID=intron:CHM13_chrY_T0001055:1;Name=LINC00280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10106675	10106927	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001055;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_T0001055;transcript_name=CHM13_chrY_T0001055;gene_name=LINC00280;ID=exon:CHM13_chrY_T0001055:2;Name=LINC00280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10106928	10111016	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001055;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_T0001055;transcript_name=CHM13_chrY_T0001055;gene_name=LINC00280;ID=intron:CHM13_chrY_T0001055:2;Name=LINC00280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10111017	10112876	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=274.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001055;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_T0001055;transcript_name=CHM13_chrY_T0001055;gene_name=LINC00280;ID=exon:CHM13_chrY_T0001055:3;Name=LINC00280;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10112025	10116227	1000	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.33;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001056;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_G0000340;transcript_name=CHM13_chrY_T0001056;gene_name=LINC00280;ID=CHM13_chrY_T0001056;Name=LINC00280
CHM13_chrY	CAT	exon	10112025	10112110	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.33;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001056;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_T0001056;transcript_name=CHM13_chrY_T0001056;gene_name=LINC00280;ID=exon:CHM13_chrY_T0001056:0;Name=LINC00280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10112111	10114611	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.33;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001056;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_T0001056;transcript_name=CHM13_chrY_T0001056;gene_name=LINC00280;ID=intron:CHM13_chrY_T0001056:0;Name=LINC00280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10114612	10114754	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.33;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001056;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_T0001056;transcript_name=CHM13_chrY_T0001056;gene_name=LINC00280;ID=exon:CHM13_chrY_T0001056:1;Name=LINC00280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10114755	10116008	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.33;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001056;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_T0001056;transcript_name=CHM13_chrY_T0001056;gene_name=LINC00280;ID=intron:CHM13_chrY_T0001056:1;Name=LINC00280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10116009	10116227	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.33;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;transcript_id=CHM13_chrY_T0001056;gene_id=CHM13_chrY_G0000340;Parent=CHM13_chrY_T0001056;transcript_name=CHM13_chrY_T0001056;gene_name=LINC00280;ID=exon:CHM13_chrY_T0001056:2;Name=LINC00280;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10130123	10145421	.	-	.	source_gene_common_name=RBMY2GP;source_gene=ENSG00000223744.1;gene_id=CHM13_chrY_G0000341;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2GP;gene_sources=liftoff;ID=CHM13_chrY_G0000341;Name=RBMY2GP
CHM13_chrY	CAT	transcript	10130123	10145421	1000	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_G0000341;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=CHM13_chrY_T0001057;Name=RBMY2GP
CHM13_chrY	CAT	exon	10130123	10130424	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_T0001057;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=exon:CHM13_chrY_T0001057:0;Name=RBMY2GP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10130425	10130833	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_T0001057;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=intron:CHM13_chrY_T0001057:0;Name=RBMY2GP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10130834	10130915	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_T0001057;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=exon:CHM13_chrY_T0001057:1;Name=RBMY2GP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10130916	10131025	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_T0001057;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=intron:CHM13_chrY_T0001057:1;Name=RBMY2GP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10131026	10131136	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_T0001057;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=exon:CHM13_chrY_T0001057:2;Name=RBMY2GP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10131137	10131533	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_T0001057;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=intron:CHM13_chrY_T0001057:2;Name=RBMY2GP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10131534	10131644	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_T0001057;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=exon:CHM13_chrY_T0001057:3;Name=RBMY2GP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10131645	10132451	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_T0001057;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=intron:CHM13_chrY_T0001057:3;Name=RBMY2GP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10132452	10132551	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_T0001057;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=exon:CHM13_chrY_T0001057:4;Name=RBMY2GP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10132552	10134551	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_T0001057;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=intron:CHM13_chrY_T0001057:4;Name=RBMY2GP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10134552	10134701	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_T0001057;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=exon:CHM13_chrY_T0001057:5;Name=RBMY2GP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10134702	10145243	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_T0001057;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=intron:CHM13_chrY_T0001057:5;Name=RBMY2GP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10145244	10145421	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=CHM13_chrY_T0001057;gene_id=CHM13_chrY_G0000341;Parent=CHM13_chrY_T0001057;transcript_name=CHM13_chrY_T0001057;gene_name=RBMY2GP;ID=exon:CHM13_chrY_T0001057:6;Name=RBMY2GP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10130846	10157276	.	-	.	source_gene_common_name=ENSG00000295986;source_gene=ENSG00000295986.1;gene_id=CHM13_chrY_G0000342;gene_biotype=lncRNA;gene_name=ENSG00000295986;gene_sources=liftoff;ID=CHM13_chrY_G0000342;Name=ENSG00000295986
CHM13_chrY	CAT	transcript	10130846	10157276	1000	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=CHM13_chrY_T0001058;gene_id=CHM13_chrY_G0000342;Parent=CHM13_chrY_G0000342;transcript_name=CHM13_chrY_T0001058;gene_name=ENSG00000295986;ID=CHM13_chrY_T0001058;Name=ENSG00000295986
CHM13_chrY	CAT	exon	10130846	10130915	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=CHM13_chrY_T0001058;gene_id=CHM13_chrY_G0000342;Parent=CHM13_chrY_T0001058;transcript_name=CHM13_chrY_T0001058;gene_name=ENSG00000295986;ID=exon:CHM13_chrY_T0001058:0;Name=ENSG00000295986;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10130916	10134551	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=CHM13_chrY_T0001058;gene_id=CHM13_chrY_G0000342;Parent=CHM13_chrY_T0001058;transcript_name=CHM13_chrY_T0001058;gene_name=ENSG00000295986;ID=intron:CHM13_chrY_T0001058:0;Name=ENSG00000295986;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10134552	10134667	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=CHM13_chrY_T0001058;gene_id=CHM13_chrY_G0000342;Parent=CHM13_chrY_T0001058;transcript_name=CHM13_chrY_T0001058;gene_name=ENSG00000295986;ID=exon:CHM13_chrY_T0001058:1;Name=ENSG00000295986;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10134668	10156792	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=CHM13_chrY_T0001058;gene_id=CHM13_chrY_G0000342;Parent=CHM13_chrY_T0001058;transcript_name=CHM13_chrY_T0001058;gene_name=ENSG00000295986;ID=intron:CHM13_chrY_T0001058:1;Name=ENSG00000295986;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10156793	10157276	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=CHM13_chrY_T0001058;gene_id=CHM13_chrY_G0000342;Parent=CHM13_chrY_T0001058;transcript_name=CHM13_chrY_T0001058;gene_name=ENSG00000295986;ID=exon:CHM13_chrY_T0001058:2;Name=ENSG00000295986;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10165272	10167432	.	-	.	source_gene_common_name=ENSG00000235094;source_gene=ENSG00000235094.3;gene_id=CHM13_chrY_G0000343;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000235094;gene_sources=liftoff;ID=CHM13_chrY_G0000343;Name=ENSG00000235094
CHM13_chrY	CAT	transcript	10165272	10167432	1000	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=CHM13_chrY_T0001059;gene_id=CHM13_chrY_G0000343;Parent=CHM13_chrY_G0000343;transcript_name=CHM13_chrY_T0001059;gene_name=ENSG00000235094;ID=CHM13_chrY_T0001059;Name=ENSG00000235094
CHM13_chrY	CAT	exon	10165272	10165317	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=CHM13_chrY_T0001059;gene_id=CHM13_chrY_G0000343;Parent=CHM13_chrY_T0001059;transcript_name=CHM13_chrY_T0001059;gene_name=ENSG00000235094;ID=exon:CHM13_chrY_T0001059:0;Name=ENSG00000235094;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10165318	10165553	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=CHM13_chrY_T0001059;gene_id=CHM13_chrY_G0000343;Parent=CHM13_chrY_T0001059;transcript_name=CHM13_chrY_T0001059;gene_name=ENSG00000235094;ID=intron:CHM13_chrY_T0001059:0;Name=ENSG00000235094;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10165554	10165576	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=CHM13_chrY_T0001059;gene_id=CHM13_chrY_G0000343;Parent=CHM13_chrY_T0001059;transcript_name=CHM13_chrY_T0001059;gene_name=ENSG00000235094;ID=exon:CHM13_chrY_T0001059:1;Name=ENSG00000235094;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10165577	10165662	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=CHM13_chrY_T0001059;gene_id=CHM13_chrY_G0000343;Parent=CHM13_chrY_T0001059;transcript_name=CHM13_chrY_T0001059;gene_name=ENSG00000235094;ID=intron:CHM13_chrY_T0001059:1;Name=ENSG00000235094;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10165663	10165778	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=CHM13_chrY_T0001059;gene_id=CHM13_chrY_G0000343;Parent=CHM13_chrY_T0001059;transcript_name=CHM13_chrY_T0001059;gene_name=ENSG00000235094;ID=exon:CHM13_chrY_T0001059:2;Name=ENSG00000235094;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10165779	10165973	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=CHM13_chrY_T0001059;gene_id=CHM13_chrY_G0000343;Parent=CHM13_chrY_T0001059;transcript_name=CHM13_chrY_T0001059;gene_name=ENSG00000235094;ID=intron:CHM13_chrY_T0001059:2;Name=ENSG00000235094;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10165974	10166051	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=CHM13_chrY_T0001059;gene_id=CHM13_chrY_G0000343;Parent=CHM13_chrY_T0001059;transcript_name=CHM13_chrY_T0001059;gene_name=ENSG00000235094;ID=exon:CHM13_chrY_T0001059:3;Name=ENSG00000235094;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10166052	10167102	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=CHM13_chrY_T0001059;gene_id=CHM13_chrY_G0000343;Parent=CHM13_chrY_T0001059;transcript_name=CHM13_chrY_T0001059;gene_name=ENSG00000235094;ID=intron:CHM13_chrY_T0001059:3;Name=ENSG00000235094;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10167103	10167432	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;transcript_id=CHM13_chrY_T0001059;gene_id=CHM13_chrY_G0000343;Parent=CHM13_chrY_T0001059;transcript_name=CHM13_chrY_T0001059;gene_name=ENSG00000235094;ID=exon:CHM13_chrY_T0001059:4;Name=ENSG00000235094;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10168400	10169517	.	+	.	source_gene_common_name=TSPY19P;source_gene=ENSG00000234583.1;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;gene_id=CHM13_chrY_G0000344;gene_biotype=unprocessed_pseudogene;gene_name=TSPY19P;gene_sources=liftoff;ID=CHM13_chrY_G0000344;Name=TSPY19P
CHM13_chrY	CAT	transcript	10168400	10169517	1000	+	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=CHM13_chrY_T0001060;gene_id=CHM13_chrY_G0000344;Parent=CHM13_chrY_G0000344;transcript_name=CHM13_chrY_T0001060;gene_name=TSPY19P;ID=CHM13_chrY_T0001060;Name=TSPY19P
CHM13_chrY	CAT	exon	10168400	10168875	.	+	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=CHM13_chrY_T0001060;gene_id=CHM13_chrY_G0000344;Parent=CHM13_chrY_T0001060;transcript_name=CHM13_chrY_T0001060;gene_name=TSPY19P;ID=exon:CHM13_chrY_T0001060:0;Name=TSPY19P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10168876	10169484	.	+	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=CHM13_chrY_T0001060;gene_id=CHM13_chrY_G0000344;Parent=CHM13_chrY_T0001060;transcript_name=CHM13_chrY_T0001060;gene_name=TSPY19P;ID=intron:CHM13_chrY_T0001060:0;Name=TSPY19P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10169485	10169517	.	+	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000441642.1,ENST00000441642.1;transcript_id=CHM13_chrY_T0001060;gene_id=CHM13_chrY_G0000344;Parent=CHM13_chrY_T0001060;transcript_name=CHM13_chrY_T0001060;gene_name=TSPY19P;ID=exon:CHM13_chrY_T0001060:1;Name=TSPY19P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10198260	10206860	.	-	.	source_gene_common_name=ENSG00000296934;source_gene=ENSG00000296934.1;gene_id=CHM13_chrY_G0000345;gene_biotype=lncRNA;gene_name=ENSG00000296934;gene_sources=liftoff;ID=CHM13_chrY_G0000345;Name=ENSG00000296934
CHM13_chrY	CAT	transcript	10198260	10206848	1000	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001061;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_G0000345;transcript_name=CHM13_chrY_T0001061;gene_name=ENSG00000296934;ID=CHM13_chrY_T0001061;Name=ENSG00000296934
CHM13_chrY	CAT	exon	10198260	10198873	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001061;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001061;transcript_name=CHM13_chrY_T0001061;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001061:0;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10198874	10205480	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001061;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001061;transcript_name=CHM13_chrY_T0001061;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001061:0;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205481	10205591	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001061;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001061;transcript_name=CHM13_chrY_T0001061;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001061:1;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205592	10205719	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001061;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001061;transcript_name=CHM13_chrY_T0001061;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001061:1;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205720	10205797	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001061;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001061;transcript_name=CHM13_chrY_T0001061;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001061:2;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205798	10206403	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001061;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001061;transcript_name=CHM13_chrY_T0001061;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001061:2;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10206404	10206848	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001061;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001061;transcript_name=CHM13_chrY_T0001061;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001061:3;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10202371	10206860	1000	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_G0000345;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=CHM13_chrY_T0001063;Name=ENSG00000296934
CHM13_chrY	CAT	exon	10202371	10202939	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001063;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001063:0;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10202940	10204341	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001063;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001063:0;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10204342	10204355	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001063;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001063:1;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10204356	10205008	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001063;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001063:1;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205009	10205131	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001063;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001063:2;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205132	10205480	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001063;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001063:2;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205481	10205591	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001063;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001063:3;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205592	10205719	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001063;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001063:3;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205720	10205840	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001063;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001063:4;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205841	10206295	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001063;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001063:4;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10206296	10206370	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001063;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001063:5;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10206371	10206793	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001063;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001063:5;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10206794	10206860	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001063;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001063;transcript_name=CHM13_chrY_T0001063;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001063:6;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10202539	10206871	1000	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001064;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_G0000345;transcript_name=CHM13_chrY_T0001064;gene_name=ENSG00000296934;ID=CHM13_chrY_T0001064;Name=ENSG00000296934
CHM13_chrY	CAT	exon	10202539	10202920	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001064;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001064;transcript_name=CHM13_chrY_T0001064;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001064:0;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10202921	10204341	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001064;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001064;transcript_name=CHM13_chrY_T0001064;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001064:0;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10204342	10204355	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001064;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001064;transcript_name=CHM13_chrY_T0001064;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001064:1;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10204356	10205008	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001064;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001064;transcript_name=CHM13_chrY_T0001064;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001064:1;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205009	10205131	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001064;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001064;transcript_name=CHM13_chrY_T0001064;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001064:2;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205132	10205238	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001064;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001064;transcript_name=CHM13_chrY_T0001064;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001064:2;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205239	10205381	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001064;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001064;transcript_name=CHM13_chrY_T0001064;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001064:3;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205382	10205480	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001064;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001064;transcript_name=CHM13_chrY_T0001064;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001064:3;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205481	10205591	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001064;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001064;transcript_name=CHM13_chrY_T0001064;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001064:4;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205592	10205719	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001064;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001064;transcript_name=CHM13_chrY_T0001064;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001064:4;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205720	10206871	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001064;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001064;transcript_name=CHM13_chrY_T0001064;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001064:5;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10203795	10206860	1000	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001065;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_G0000345;transcript_name=CHM13_chrY_T0001065;gene_name=ENSG00000296934;ID=CHM13_chrY_T0001065;Name=ENSG00000296934
CHM13_chrY	CAT	exon	10203795	10204355	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001065;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001065;transcript_name=CHM13_chrY_T0001065;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001065:0;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10204356	10205008	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001065;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001065;transcript_name=CHM13_chrY_T0001065;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001065:0;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205009	10205131	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001065;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001065;transcript_name=CHM13_chrY_T0001065;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001065:1;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205132	10205238	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001065;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001065;transcript_name=CHM13_chrY_T0001065;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001065:1;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205239	10205381	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001065;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001065;transcript_name=CHM13_chrY_T0001065;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001065:2;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205382	10205480	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001065;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001065;transcript_name=CHM13_chrY_T0001065;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001065:2;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205481	10205591	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001065;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001065;transcript_name=CHM13_chrY_T0001065;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001065:3;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205592	10205719	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001065;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001065;transcript_name=CHM13_chrY_T0001065;gene_name=ENSG00000296934;ID=intron:CHM13_chrY_T0001065:3;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205720	10206860	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;transcript_id=CHM13_chrY_T0001065;gene_id=CHM13_chrY_G0000345;Parent=CHM13_chrY_T0001065;transcript_name=CHM13_chrY_T0001065;gene_name=ENSG00000296934;ID=exon:CHM13_chrY_T0001065:4;Name=ENSG00000296934;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10199408	10199894	.	+	.	source_gene_common_name=ENSG00000275352;source_gene=ENSG00000275352.1;gene_id=CHM13_chrY_G0000346;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000275352;gene_sources=liftoff;ID=CHM13_chrY_G0000346;Name=ENSG00000275352
CHM13_chrY	CAT	transcript	10199408	10199894	1000	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=299.658;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=CHM13_chrY_T0001062;gene_id=CHM13_chrY_G0000346;Parent=CHM13_chrY_G0000346;transcript_name=CHM13_chrY_T0001062;gene_name=ENSG00000275352;ID=CHM13_chrY_T0001062;Name=ENSG00000275352
CHM13_chrY	CAT	exon	10199408	10199471	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=299.658;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=CHM13_chrY_T0001062;gene_id=CHM13_chrY_G0000346;Parent=CHM13_chrY_T0001062;transcript_name=CHM13_chrY_T0001062;gene_name=ENSG00000275352;ID=exon:CHM13_chrY_T0001062:0;Name=ENSG00000275352;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10199472	10199560	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=299.658;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=CHM13_chrY_T0001062;gene_id=CHM13_chrY_G0000346;Parent=CHM13_chrY_T0001062;transcript_name=CHM13_chrY_T0001062;gene_name=ENSG00000275352;ID=intron:CHM13_chrY_T0001062:0;Name=ENSG00000275352;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10199561	10199705	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=299.658;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=CHM13_chrY_T0001062;gene_id=CHM13_chrY_G0000346;Parent=CHM13_chrY_T0001062;transcript_name=CHM13_chrY_T0001062;gene_name=ENSG00000275352;ID=exon:CHM13_chrY_T0001062:1;Name=ENSG00000275352;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10199706	10199811	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=299.658;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=CHM13_chrY_T0001062;gene_id=CHM13_chrY_G0000346;Parent=CHM13_chrY_T0001062;transcript_name=CHM13_chrY_T0001062;gene_name=ENSG00000275352;ID=intron:CHM13_chrY_T0001062:1;Name=ENSG00000275352;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10199812	10199894	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=299.658;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=CHM13_chrY_T0001062;gene_id=CHM13_chrY_G0000346;Parent=CHM13_chrY_T0001062;transcript_name=CHM13_chrY_T0001062;gene_name=ENSG00000275352;ID=exon:CHM13_chrY_T0001062:2;Name=ENSG00000275352;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10204198	10206880	.	-	.	source_gene_common_name=TSPY11P;source_gene=ENSG00000238235.1;gene_id=CHM13_chrY_G0000347;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY11P;gene_sources=liftoff;ID=CHM13_chrY_G0000347;Name=TSPY11P
CHM13_chrY	CAT	transcript	10204198	10206880	1000	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=CHM13_chrY_T0001066;gene_id=CHM13_chrY_G0000347;Parent=CHM13_chrY_G0000347;transcript_name=CHM13_chrY_T0001066;gene_name=TSPY11P;ID=CHM13_chrY_T0001066;Name=TSPY11P
CHM13_chrY	CAT	exon	10204198	10204344	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=CHM13_chrY_T0001066;gene_id=CHM13_chrY_G0000347;Parent=CHM13_chrY_T0001066;transcript_name=CHM13_chrY_T0001066;gene_name=TSPY11P;ID=exon:CHM13_chrY_T0001066:0;Name=TSPY11P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10204345	10205042	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=CHM13_chrY_T0001066;gene_id=CHM13_chrY_G0000347;Parent=CHM13_chrY_T0001066;transcript_name=CHM13_chrY_T0001066;gene_name=TSPY11P;ID=intron:CHM13_chrY_T0001066:0;Name=TSPY11P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205043	10205131	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=CHM13_chrY_T0001066;gene_id=CHM13_chrY_G0000347;Parent=CHM13_chrY_T0001066;transcript_name=CHM13_chrY_T0001066;gene_name=TSPY11P;ID=exon:CHM13_chrY_T0001066:1;Name=TSPY11P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205132	10205238	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=CHM13_chrY_T0001066;gene_id=CHM13_chrY_G0000347;Parent=CHM13_chrY_T0001066;transcript_name=CHM13_chrY_T0001066;gene_name=TSPY11P;ID=intron:CHM13_chrY_T0001066:1;Name=TSPY11P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205239	10205381	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=CHM13_chrY_T0001066;gene_id=CHM13_chrY_G0000347;Parent=CHM13_chrY_T0001066;transcript_name=CHM13_chrY_T0001066;gene_name=TSPY11P;ID=exon:CHM13_chrY_T0001066:2;Name=TSPY11P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205382	10205480	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=CHM13_chrY_T0001066;gene_id=CHM13_chrY_G0000347;Parent=CHM13_chrY_T0001066;transcript_name=CHM13_chrY_T0001066;gene_name=TSPY11P;ID=intron:CHM13_chrY_T0001066:2;Name=TSPY11P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205481	10205591	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=CHM13_chrY_T0001066;gene_id=CHM13_chrY_G0000347;Parent=CHM13_chrY_T0001066;transcript_name=CHM13_chrY_T0001066;gene_name=TSPY11P;ID=exon:CHM13_chrY_T0001066:3;Name=TSPY11P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205592	10205719	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=CHM13_chrY_T0001066;gene_id=CHM13_chrY_G0000347;Parent=CHM13_chrY_T0001066;transcript_name=CHM13_chrY_T0001066;gene_name=TSPY11P;ID=intron:CHM13_chrY_T0001066:3;Name=TSPY11P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10205720	10205797	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=CHM13_chrY_T0001066;gene_id=CHM13_chrY_G0000347;Parent=CHM13_chrY_T0001066;transcript_name=CHM13_chrY_T0001066;gene_name=TSPY11P;ID=exon:CHM13_chrY_T0001066:4;Name=TSPY11P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10205798	10206403	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=CHM13_chrY_T0001066;gene_id=CHM13_chrY_G0000347;Parent=CHM13_chrY_T0001066;transcript_name=CHM13_chrY_T0001066;gene_name=TSPY11P;ID=intron:CHM13_chrY_T0001066:4;Name=TSPY11P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10206404	10206880	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=CHM13_chrY_T0001066;gene_id=CHM13_chrY_G0000347;Parent=CHM13_chrY_T0001066;transcript_name=CHM13_chrY_T0001066;gene_name=TSPY11P;ID=exon:CHM13_chrY_T0001066:5;Name=TSPY11P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10207878	10209871	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9;gene_id=CHM13_chrY_G0000348;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000348;Name=FAM197Y9
CHM13_chrY	CAT	transcript	10207878	10209871	1000	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001067;gene_id=CHM13_chrY_G0000348;Parent=CHM13_chrY_G0000348;transcript_name=CHM13_chrY_T0001067;gene_name=FAM197Y9;ID=CHM13_chrY_T0001067;Name=FAM197Y9
CHM13_chrY	CAT	exon	10207878	10208187	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001067;gene_id=CHM13_chrY_G0000348;Parent=CHM13_chrY_T0001067;transcript_name=CHM13_chrY_T0001067;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0001067:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10208188	10209529	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001067;gene_id=CHM13_chrY_G0000348;Parent=CHM13_chrY_T0001067;transcript_name=CHM13_chrY_T0001067;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0001067:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10209530	10209613	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001067;gene_id=CHM13_chrY_G0000348;Parent=CHM13_chrY_T0001067;transcript_name=CHM13_chrY_T0001067;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0001067:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10209614	10209725	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001067;gene_id=CHM13_chrY_G0000348;Parent=CHM13_chrY_T0001067;transcript_name=CHM13_chrY_T0001067;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0001067:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10209726	10209871	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001067;gene_id=CHM13_chrY_G0000348;Parent=CHM13_chrY_T0001067;transcript_name=CHM13_chrY_T0001067;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0001067:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10209520	10217207	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1;gene_id=CHM13_chrY_G0000349;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=CHM13_chrY_G0000349;Name=FAM197Y9
CHM13_chrY	CAT	transcript	10209520	10217207	1000	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001068;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_G0000349;transcript_name=CHM13_chrY_T0001068;gene_name=FAM197Y9;ID=CHM13_chrY_T0001068;Name=FAM197Y9
CHM13_chrY	CAT	exon	10209520	10209639	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001068;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_T0001068;transcript_name=CHM13_chrY_T0001068;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0001068:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10209640	10211444	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001068;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_T0001068;transcript_name=CHM13_chrY_T0001068;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0001068:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10211445	10211530	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001068;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_T0001068;transcript_name=CHM13_chrY_T0001068;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0001068:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10211531	10215081	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001068;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_T0001068;transcript_name=CHM13_chrY_T0001068;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0001068:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10215082	10217207	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001068;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_T0001068;transcript_name=CHM13_chrY_T0001068;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0001068:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10209538	10215141	1000	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001069;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_G0000349;transcript_name=CHM13_chrY_T0001069;gene_name=FAM197Y9;ID=CHM13_chrY_T0001069;Name=FAM197Y9
CHM13_chrY	CAT	exon	10209538	10209639	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001069;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_T0001069;transcript_name=CHM13_chrY_T0001069;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0001069:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10209640	10209725	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001069;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_T0001069;transcript_name=CHM13_chrY_T0001069;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0001069:0;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10209726	10209871	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001069;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_T0001069;transcript_name=CHM13_chrY_T0001069;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0001069:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10209872	10211371	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001069;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_T0001069;transcript_name=CHM13_chrY_T0001069;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0001069:1;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10211372	10211530	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001069;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_T0001069;transcript_name=CHM13_chrY_T0001069;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0001069:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10211531	10215081	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001069;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_T0001069;transcript_name=CHM13_chrY_T0001069;gene_name=FAM197Y9;ID=intron:CHM13_chrY_T0001069:2;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10215082	10215141	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=CHM13_chrY_T0001069;gene_id=CHM13_chrY_G0000349;Parent=CHM13_chrY_T0001069;transcript_name=CHM13_chrY_T0001069;gene_name=FAM197Y9;ID=exon:CHM13_chrY_T0001069:3;Name=FAM197Y9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10224453	10227249	.	-	.	source_gene_common_name=TSPY2;source_gene=ENSG00000168757.13;gene_id=CHM13_chrY_G0000350;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=liftoff;ID=CHM13_chrY_G0000350;Name=TSPY2
CHM13_chrY	CAT	transcript	10224453	10227203	1000	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001070;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_G0000350;transcript_name=CHM13_chrY_T0001070;gene_name=TSPY2;ID=CHM13_chrY_T0001070;Name=TSPY2
CHM13_chrY	CAT	exon	10224453	10225236	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001070;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001070;transcript_name=CHM13_chrY_T0001070;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001070:0;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10225237	10225363	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001070;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001070;transcript_name=CHM13_chrY_T0001070;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001070:0;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10225364	10225910	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001070;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001070;transcript_name=CHM13_chrY_T0001070;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001070:1;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10225911	10226038	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001070;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001070;transcript_name=CHM13_chrY_T0001070;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001070:1;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10226039	10226116	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001070;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001070;transcript_name=CHM13_chrY_T0001070;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001070:2;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10226117	10226717	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001070;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001070;transcript_name=CHM13_chrY_T0001070;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001070:2;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10226718	10227203	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001070;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001070;transcript_name=CHM13_chrY_T0001070;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001070:3;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10224454	10227249	100	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_G0000350;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=CHM13_chrY_T0001071;Name=TSPY2
CHM13_chrY	CAT	exon	10224454	10224669	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001071:0;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10224647	10224669	.	-	2	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001071:0;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10224670	10225363	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001071:0;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10225364	10225445	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001071:1;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10225364	10225445	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001071:1;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10225446	10225551	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001071:1;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10225552	10225697	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001071:2;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10225552	10225697	.	-	2	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001071:2;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10225698	10225798	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001071:2;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10225799	10225910	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001071:3;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10225799	10225910	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001071:3;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10225911	10226038	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001071:3;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10226039	10226116	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001071:4;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10226039	10226116	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001071:4;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10226117	10226717	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001071:4;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10226718	10227249	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001071:5;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10226718	10227203	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001071:5;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	10227201	10227203	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001071;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001071;transcript_name=CHM13_chrY_T0001071;gene_name=TSPY2;ID=start_codon:CHM13_chrY_T0001071;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10224460	10227203	10000	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_G0000350;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=CHM13_chrY_T0001072;Name=TSPY2
CHM13_chrY	CAT	exon	10224460	10224669	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001072:0;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10224670	10225363	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001072:0;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10225364	10225456	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001072:1;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10225394	10225456	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001072:0;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	10225394	10225396	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=stop_codon:CHM13_chrY_T0001072;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10225457	10225551	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001072:1;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10225552	10225697	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001072:2;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10225552	10225697	.	-	2	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001072:1;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10225698	10225798	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001072:2;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10225799	10225910	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001072:3;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10225799	10225910	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001072:2;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10225911	10226038	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001072:3;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10226039	10226116	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001072:4;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10226039	10226116	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001072:3;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10226117	10226717	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001072:4;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10226718	10227203	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001072:5;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10226718	10227203	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001072:4;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	10227201	10227203	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001072;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001072;transcript_name=CHM13_chrY_T0001072;gene_name=TSPY2;ID=start_codon:CHM13_chrY_T0001072;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10224468	10225849	1000	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001073;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_G0000350;transcript_name=CHM13_chrY_T0001073;gene_name=TSPY2;ID=CHM13_chrY_T0001073;Name=TSPY2
CHM13_chrY	CAT	exon	10224468	10224669	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001073;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001073;transcript_name=CHM13_chrY_T0001073;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001073:0;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10224670	10225363	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001073;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001073;transcript_name=CHM13_chrY_T0001073;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001073:0;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10225364	10225445	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001073;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001073;transcript_name=CHM13_chrY_T0001073;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001073:1;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10225446	10225551	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001073;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001073;transcript_name=CHM13_chrY_T0001073;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001073:1;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10225552	10225849	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001073;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001073;transcript_name=CHM13_chrY_T0001073;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001073:2;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10224580	10227249	100	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_G0000350;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=CHM13_chrY_T0001074;Name=TSPY2
CHM13_chrY	CAT	exon	10224580	10224669	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001074:0;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10224647	10224669	.	-	2	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001074:0;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10224670	10225363	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001074:0;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10225364	10225445	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001074:1;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10225364	10225445	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001074:1;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10225446	10225551	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001074:1;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10225552	10225697	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001074:2;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10225552	10225697	.	-	2	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001074:2;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10225698	10225798	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001074:2;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10225799	10225910	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001074:3;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10225799	10225910	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001074:3;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10225911	10226038	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001074:3;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10226039	10226116	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001074:4;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10226039	10226116	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001074:4;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10226117	10226717	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001074:4;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10226718	10226855	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001074:5;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10226718	10226855	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001074:5;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10226856	10227116	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=intron:CHM13_chrY_T0001074:5;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10227117	10227249	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=exon:CHM13_chrY_T0001074:6;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	10227117	10227203	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=CDS:CHM13_chrY_T0001074:6;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	10227201	10227203	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;transcript_id=CHM13_chrY_T0001074;gene_id=CHM13_chrY_G0000350;Parent=CHM13_chrY_T0001074;transcript_name=CHM13_chrY_T0001074;gene_name=TSPY2;ID=start_codon:CHM13_chrY_T0001074;Name=TSPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10227381	10232199	.	+	.	source_gene_common_name=ENSG00000290369;source_gene=ENSG00000290369.2;gene_id=CHM13_chrY_G0000351;gene_biotype=lncRNA;gene_name=ENSG00000290369;gene_sources=liftoff;ID=CHM13_chrY_G0000351;Name=ENSG00000290369
CHM13_chrY	CAT	transcript	10227381	10232020	1000	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001075;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_G0000351;transcript_name=CHM13_chrY_T0001075;gene_name=ENSG00000290369;ID=CHM13_chrY_T0001075;Name=ENSG00000290369
CHM13_chrY	CAT	exon	10227381	10227566	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001075;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001075;transcript_name=CHM13_chrY_T0001075;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001075:0;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10227567	10229501	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001075;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001075;transcript_name=CHM13_chrY_T0001075;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001075:0;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10229502	10229624	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001075;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001075;transcript_name=CHM13_chrY_T0001075;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001075:1;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10229625	10229819	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001075;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001075;transcript_name=CHM13_chrY_T0001075;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001075:1;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10229820	10229909	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001075;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001075;transcript_name=CHM13_chrY_T0001075;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001075:2;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10229910	10230022	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001075;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001075;transcript_name=CHM13_chrY_T0001075;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001075:2;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10230023	10230168	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001075;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001075;transcript_name=CHM13_chrY_T0001075;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001075:3;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10230169	10230708	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001075;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001075;transcript_name=CHM13_chrY_T0001075;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001075:3;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10230709	10232020	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001075;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001075;transcript_name=CHM13_chrY_T0001075;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001075:4;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10227392	10232199	1000	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001076;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_G0000351;transcript_name=CHM13_chrY_T0001076;gene_name=ENSG00000290369;ID=CHM13_chrY_T0001076;Name=ENSG00000290369
CHM13_chrY	CAT	exon	10227392	10227566	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001076;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001076;transcript_name=CHM13_chrY_T0001076;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001076:0;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10227567	10229501	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001076;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001076;transcript_name=CHM13_chrY_T0001076;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001076:0;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10229502	10229624	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001076;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001076;transcript_name=CHM13_chrY_T0001076;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001076:1;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10229625	10229819	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001076;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001076;transcript_name=CHM13_chrY_T0001076;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001076:1;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10229820	10229909	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001076;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001076;transcript_name=CHM13_chrY_T0001076;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001076:2;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10229910	10230022	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001076;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001076;transcript_name=CHM13_chrY_T0001076;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001076:2;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10230023	10230168	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001076;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001076;transcript_name=CHM13_chrY_T0001076;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001076:3;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10230169	10230941	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001076;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001076;transcript_name=CHM13_chrY_T0001076;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001076:3;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10230942	10231049	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001076;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001076;transcript_name=CHM13_chrY_T0001076;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001076:4;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10231050	10231601	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001076;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001076;transcript_name=CHM13_chrY_T0001076;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001076:4;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10231602	10232199	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001076;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001076;transcript_name=CHM13_chrY_T0001076;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001076:5;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10227403	10232020	1000	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_G0000351;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=CHM13_chrY_T0001077;Name=ENSG00000290369
CHM13_chrY	CAT	exon	10227403	10227566	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001077;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001077:0;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10227567	10229501	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001077;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001077:0;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10229502	10229624	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001077;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001077:1;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10229625	10229823	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001077;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001077:1;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10229824	10229909	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001077;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001077:2;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10229910	10230022	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001077;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001077:2;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10230023	10230168	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001077;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001077:3;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10230169	10230708	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001077;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001077:3;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10230709	10230761	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001077;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001077:4;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10230762	10230941	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001077;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001077:4;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10230942	10231049	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001077;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001077:5;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10231050	10231601	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001077;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=intron:CHM13_chrY_T0001077:5;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10231602	10232020	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=CHM13_chrY_T0001077;gene_id=CHM13_chrY_G0000351;Parent=CHM13_chrY_T0001077;transcript_name=CHM13_chrY_T0001077;gene_name=ENSG00000290369;ID=exon:CHM13_chrY_T0001077:6;Name=ENSG00000290369;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10228189	10230168	.	+	.	source_gene_common_name=TTTY23B;source_gene=ENSG00000250204.3;gene_id=CHM13_chrY_G0000352;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TTTY23B;gene_sources=liftoff;ID=CHM13_chrY_G0000352;Name=TTTY23B
CHM13_chrY	CAT	transcript	10228189	10230168	1000	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=CHM13_chrY_T0001078;gene_id=CHM13_chrY_G0000352;Parent=CHM13_chrY_G0000352;transcript_name=CHM13_chrY_T0001078;gene_name=TTTY23B;ID=CHM13_chrY_T0001078;Name=TTTY23B
CHM13_chrY	CAT	exon	10228189	10228500	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=CHM13_chrY_T0001078;gene_id=CHM13_chrY_G0000352;Parent=CHM13_chrY_T0001078;transcript_name=CHM13_chrY_T0001078;gene_name=TTTY23B;ID=exon:CHM13_chrY_T0001078:0;Name=TTTY23B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10228501	10229819	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=CHM13_chrY_T0001078;gene_id=CHM13_chrY_G0000352;Parent=CHM13_chrY_T0001078;transcript_name=CHM13_chrY_T0001078;gene_name=TTTY23B;ID=intron:CHM13_chrY_T0001078:0;Name=TTTY23B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10229820	10229910	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=CHM13_chrY_T0001078;gene_id=CHM13_chrY_G0000352;Parent=CHM13_chrY_T0001078;transcript_name=CHM13_chrY_T0001078;gene_name=TTTY23B;ID=exon:CHM13_chrY_T0001078:1;Name=TTTY23B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10229911	10230022	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=CHM13_chrY_T0001078;gene_id=CHM13_chrY_G0000352;Parent=CHM13_chrY_T0001078;transcript_name=CHM13_chrY_T0001078;gene_name=TTTY23B;ID=intron:CHM13_chrY_T0001078:1;Name=TTTY23B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10230023	10230168	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=CHM13_chrY_T0001078;gene_id=CHM13_chrY_G0000352;Parent=CHM13_chrY_T0001078;transcript_name=CHM13_chrY_T0001078;gene_name=TTTY23B;ID=exon:CHM13_chrY_T0001078:2;Name=TTTY23B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10270637	10278505	.	+	.	source_gene_common_name=RBMY2OP;source_gene=ENSG00000234950.1;alternative_source_transcripts=ENST00000447105.1;gene_id=CHM13_chrY_G0000353;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2OP;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000353;Name=RBMY2OP
CHM13_chrY	CAT	transcript	10270637	10278505	1000	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=CHM13_chrY_T0001079;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_G0000353;transcript_name=CHM13_chrY_T0001079;gene_name=RBMY2OP;ID=CHM13_chrY_T0001079;Name=RBMY2OP
CHM13_chrY	CAT	exon	10270637	10270745	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=CHM13_chrY_T0001079;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001079;transcript_name=CHM13_chrY_T0001079;gene_name=RBMY2OP;ID=exon:CHM13_chrY_T0001079:0;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10270746	10271204	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=CHM13_chrY_T0001079;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001079;transcript_name=CHM13_chrY_T0001079;gene_name=RBMY2OP;ID=intron:CHM13_chrY_T0001079:0;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10271205	10271280	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=CHM13_chrY_T0001079;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001079;transcript_name=CHM13_chrY_T0001079;gene_name=RBMY2OP;ID=exon:CHM13_chrY_T0001079:1;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10271281	10276521	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=CHM13_chrY_T0001079;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001079;transcript_name=CHM13_chrY_T0001079;gene_name=RBMY2OP;ID=intron:CHM13_chrY_T0001079:1;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10276522	10276634	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=CHM13_chrY_T0001079;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001079;transcript_name=CHM13_chrY_T0001079;gene_name=RBMY2OP;ID=exon:CHM13_chrY_T0001079:2;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10276635	10277500	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=CHM13_chrY_T0001079;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001079;transcript_name=CHM13_chrY_T0001079;gene_name=RBMY2OP;ID=intron:CHM13_chrY_T0001079:2;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10277501	10277780	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=CHM13_chrY_T0001079;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001079;transcript_name=CHM13_chrY_T0001079;gene_name=RBMY2OP;ID=exon:CHM13_chrY_T0001079:3;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10277781	10278193	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=CHM13_chrY_T0001079;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001079;transcript_name=CHM13_chrY_T0001079;gene_name=RBMY2OP;ID=intron:CHM13_chrY_T0001079:3;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10278194	10278505	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;alternative_source_transcripts=ENST00000447105.1;transcript_id=CHM13_chrY_T0001079;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001079;transcript_name=CHM13_chrY_T0001079;gene_name=RBMY2OP;ID=exon:CHM13_chrY_T0001079:4;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10270637	10278505	1000	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=CHM13_chrY_T0001080;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_G0000353;transcript_name=CHM13_chrY_T0001080;gene_name=RBMY2OP;ID=CHM13_chrY_T0001080;Name=RBMY2OP
CHM13_chrY	CAT	exon	10270637	10270745	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=CHM13_chrY_T0001080;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001080;transcript_name=CHM13_chrY_T0001080;gene_name=RBMY2OP;ID=exon:CHM13_chrY_T0001080:0;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10270746	10271204	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=CHM13_chrY_T0001080;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001080;transcript_name=CHM13_chrY_T0001080;gene_name=RBMY2OP;ID=intron:CHM13_chrY_T0001080:0;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10271205	10271280	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=CHM13_chrY_T0001080;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001080;transcript_name=CHM13_chrY_T0001080;gene_name=RBMY2OP;ID=exon:CHM13_chrY_T0001080:1;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10271281	10276521	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=CHM13_chrY_T0001080;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001080;transcript_name=CHM13_chrY_T0001080;gene_name=RBMY2OP;ID=intron:CHM13_chrY_T0001080:1;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10276522	10276634	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=CHM13_chrY_T0001080;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001080;transcript_name=CHM13_chrY_T0001080;gene_name=RBMY2OP;ID=exon:CHM13_chrY_T0001080:2;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10276635	10277500	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=CHM13_chrY_T0001080;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001080;transcript_name=CHM13_chrY_T0001080;gene_name=RBMY2OP;ID=intron:CHM13_chrY_T0001080:2;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10277501	10277611	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=CHM13_chrY_T0001080;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001080;transcript_name=CHM13_chrY_T0001080;gene_name=RBMY2OP;ID=exon:CHM13_chrY_T0001080:3;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10277612	10277691	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=CHM13_chrY_T0001080;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001080;transcript_name=CHM13_chrY_T0001080;gene_name=RBMY2OP;ID=intron:CHM13_chrY_T0001080:3;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10277692	10277780	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=CHM13_chrY_T0001080;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001080;transcript_name=CHM13_chrY_T0001080;gene_name=RBMY2OP;ID=exon:CHM13_chrY_T0001080:4;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10277781	10278193	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=CHM13_chrY_T0001080;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001080;transcript_name=CHM13_chrY_T0001080;gene_name=RBMY2OP;ID=intron:CHM13_chrY_T0001080:4;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10278194	10278505	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=CHM13_chrY_T0001080;gene_id=CHM13_chrY_G0000353;Parent=CHM13_chrY_T0001080;transcript_name=CHM13_chrY_T0001080;gene_name=RBMY2OP;ID=exon:CHM13_chrY_T0001080:5;Name=RBMY2OP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10273614	10354404	.	-	.	source_gene_common_name=ENSG00000290344;source_gene=ENSG00000290344.2;gene_id=CHM13_chrY_G0000354;gene_biotype=lncRNA;gene_name=ENSG00000290344;gene_sources=liftoff;ID=CHM13_chrY_G0000354;Name=ENSG00000290344
CHM13_chrY	CAT	transcript	10273614	10354401	1000	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001081;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10273614	10273774	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001081:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10273775	10308270	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001081:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10308271	10308320	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001081:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10308321	10314678	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001081:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10314679	10314797	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001081:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10314798	10342296	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001081:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001081:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001081:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001081:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001081:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001081:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10349490	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001081:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001081:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10352656	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001081:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10352657	10352757	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001081:7;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10352758	10353189	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001081:7;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001081:8;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354255	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001081:8;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354256	10354401	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001081;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001081;transcript_name=CHM13_chrY_T0001081;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001081:9;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10273614	10354367	1000	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001082;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001082;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001082;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10273614	10273774	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001082;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001082;transcript_name=CHM13_chrY_T0001082;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001082:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10273775	10342296	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001082;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001082;transcript_name=CHM13_chrY_T0001082;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001082:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001082;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001082;transcript_name=CHM13_chrY_T0001082;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001082:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001082;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001082;transcript_name=CHM13_chrY_T0001082;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001082:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001082;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001082;transcript_name=CHM13_chrY_T0001082;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001082:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001082;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001082;transcript_name=CHM13_chrY_T0001082;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001082:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001082;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001082;transcript_name=CHM13_chrY_T0001082;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001082:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10354255	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001082;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001082;transcript_name=CHM13_chrY_T0001082;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001082:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354256	10354367	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001082;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001082;transcript_name=CHM13_chrY_T0001082;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001082:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10310711	10354367	1000	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001083;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10310711	10311292	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001083;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001083:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10311293	10314678	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001083;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001083:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10314679	10314797	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001083;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001083:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10314798	10342296	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001083;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001083:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001083;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001083:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001083;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001083:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001083;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001083:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001083;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001083:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001083;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001083:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10353189	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001083;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001083:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001083;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001083:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354255	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001083;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001083:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354256	10354367	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001083;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001083;transcript_name=CHM13_chrY_T0001083;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001083:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10315223	10354367	1000	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001084;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10315223	10315550	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001084:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10315551	10342296	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001084:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001084:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001084:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001084:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001084:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001084:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10349490	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001084:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001084:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10352656	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001084:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10352657	10352757	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001084:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10352758	10353189	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001084:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001084:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354255	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001084:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354256	10354367	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001084;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001084;transcript_name=CHM13_chrY_T0001084;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001084:7;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10315223	10354365	1000	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001085;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001085;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001085;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10315223	10315550	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001085;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001085;transcript_name=CHM13_chrY_T0001085;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001085:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10315551	10342296	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001085;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001085;transcript_name=CHM13_chrY_T0001085;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001085:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001085;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001085;transcript_name=CHM13_chrY_T0001085;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001085:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001085;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001085;transcript_name=CHM13_chrY_T0001085;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001085:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001085;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001085;transcript_name=CHM13_chrY_T0001085;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001085:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001085;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001085;transcript_name=CHM13_chrY_T0001085;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001085:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001085;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001085;transcript_name=CHM13_chrY_T0001085;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001085:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10349490	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001085;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001085;transcript_name=CHM13_chrY_T0001085;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001085:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001085;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001085;transcript_name=CHM13_chrY_T0001085;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001085:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10354224	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001085;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001085;transcript_name=CHM13_chrY_T0001085;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001085:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354225	10354365	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001085;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001085;transcript_name=CHM13_chrY_T0001085;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001085:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10315226	10354383	1000	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001086;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001086;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001086;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10315226	10315550	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001086;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001086;transcript_name=CHM13_chrY_T0001086;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001086:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10315551	10342296	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001086;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001086;transcript_name=CHM13_chrY_T0001086;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001086:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001086;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001086;transcript_name=CHM13_chrY_T0001086;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001086:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001086;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001086;transcript_name=CHM13_chrY_T0001086;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001086:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001086;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001086;transcript_name=CHM13_chrY_T0001086;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001086:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001086;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001086;transcript_name=CHM13_chrY_T0001086;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001086:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001086;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001086;transcript_name=CHM13_chrY_T0001086;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001086:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10354224	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001086;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001086;transcript_name=CHM13_chrY_T0001086;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001086:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354225	10354383	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001086;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001086;transcript_name=CHM13_chrY_T0001086;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001086:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10315237	10354367	1000	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001087;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10315237	10315550	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001087;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001087:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10315551	10342296	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001087;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001087:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001087;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001087:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001087;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001087:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001087;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001087:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001087;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001087:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001087;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001087:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10349490	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001087;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001087:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001087;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001087:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10353189	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001087;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001087:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001087;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001087:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354255	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001087;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001087:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354256	10354367	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001087;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001087;transcript_name=CHM13_chrY_T0001087;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001087:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10315237	10354404	1000	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001088;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001088;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001088;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10315237	10315550	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001088;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001088;transcript_name=CHM13_chrY_T0001088;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001088:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10315551	10342296	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001088;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001088;transcript_name=CHM13_chrY_T0001088;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001088:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001088;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001088;transcript_name=CHM13_chrY_T0001088;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001088:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001088;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001088;transcript_name=CHM13_chrY_T0001088;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001088:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001088;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001088;transcript_name=CHM13_chrY_T0001088;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001088:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001088;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001088;transcript_name=CHM13_chrY_T0001088;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001088:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001088;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001088;transcript_name=CHM13_chrY_T0001088;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001088:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10354255	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001088;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001088;transcript_name=CHM13_chrY_T0001088;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001088:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354256	10354404	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001088;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001088;transcript_name=CHM13_chrY_T0001088;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001088:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10323680	10354407	1000	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001089;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10323680	10324266	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001089:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10324267	10342296	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001089:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001089:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001089:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001089:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001089:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001089:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10349490	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001089:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001089:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10352656	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001089:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10352657	10352757	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001089:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10352758	10353189	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001089:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001089:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354224	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001089:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354225	10354407	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001089;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001089;transcript_name=CHM13_chrY_T0001089;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001089:7;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10324056	10354433	1000	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001090;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10324056	10324266	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001090;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001090:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10324267	10342296	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001090;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001090:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001090;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001090:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001090;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001090:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001090;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001090:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001090;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001090:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001090;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001090:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10349490	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001090;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001090:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001090;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001090:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10353189	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001090;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001090:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001090;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001090:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354224	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001090;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001090:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354225	10354433	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001090;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001090;transcript_name=CHM13_chrY_T0001090;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001090:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10332171	10354381	1000	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001091;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10332171	10332435	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001091:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10332436	10342296	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001091:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001091:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001091:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001091:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001091:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001091:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10349490	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001091:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001091:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10352656	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001091:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10352657	10352757	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001091:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10352758	10353189	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001091:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001091:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354224	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001091:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354225	10354381	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001091;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001091;transcript_name=CHM13_chrY_T0001091;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001091:7;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10341306	10354381	1000	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001092;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10341306	10341695	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001092;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001092:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10341696	10342296	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001092;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001092:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001092;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001092:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001092;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001092:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001092;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001092:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001092;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001092:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001092;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001092:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10349490	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001092;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001092:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001092;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001092:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10353189	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001092;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001092:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001092;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001092:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354224	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001092;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001092:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354225	10354381	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001092;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001092;transcript_name=CHM13_chrY_T0001092;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001092:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10341308	10354386	1000	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001093;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001093;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001093;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10341308	10341695	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001093;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001093;transcript_name=CHM13_chrY_T0001093;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001093:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10341696	10342296	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001093;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001093;transcript_name=CHM13_chrY_T0001093;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001093:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001093;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001093;transcript_name=CHM13_chrY_T0001093;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001093:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001093;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001093;transcript_name=CHM13_chrY_T0001093;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001093:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001093;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001093;transcript_name=CHM13_chrY_T0001093;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001093:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001093;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001093;transcript_name=CHM13_chrY_T0001093;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001093:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001093;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001093;transcript_name=CHM13_chrY_T0001093;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001093:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10353189	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001093;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001093;transcript_name=CHM13_chrY_T0001093;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001093:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001093;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001093;transcript_name=CHM13_chrY_T0001093;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001093:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354255	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001093;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001093;transcript_name=CHM13_chrY_T0001093;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001093:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354256	10354386	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001093;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001093;transcript_name=CHM13_chrY_T0001093;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001093:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10341308	10354382	1000	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001094;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10341308	10341695	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001094:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10341696	10342296	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001094:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001094:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001094:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001094:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001094:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001094:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10349490	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001094:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001094:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10352656	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001094:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10352657	10352757	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001094:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10352758	10353189	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001094:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001094:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354255	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001094:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354256	10354382	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001094;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001094;transcript_name=CHM13_chrY_T0001094;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001094:7;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10341308	10354404	1000	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001095;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10341308	10341695	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001095;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001095:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10341696	10342296	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001095;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001095:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001095;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001095:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001095;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001095:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001095;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001095:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001095;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001095:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001095;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001095:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10349490	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001095;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001095:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001095;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001095:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10353189	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001095;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001095:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001095;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001095:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354255	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001095;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001095:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354256	10354404	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001095;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001095;transcript_name=CHM13_chrY_T0001095;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001095:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10341308	10354404	1000	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001096;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001096;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001096;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10341308	10341695	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001096;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001096;transcript_name=CHM13_chrY_T0001096;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001096:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10341696	10342296	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001096;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001096;transcript_name=CHM13_chrY_T0001096;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001096:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001096;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001096;transcript_name=CHM13_chrY_T0001096;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001096:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001096;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001096;transcript_name=CHM13_chrY_T0001096;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001096:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001096;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001096;transcript_name=CHM13_chrY_T0001096;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001096:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001096;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001096;transcript_name=CHM13_chrY_T0001096;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001096:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001096;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001096;transcript_name=CHM13_chrY_T0001096;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001096:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10354255	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001096;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001096;transcript_name=CHM13_chrY_T0001096;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001096:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354256	10354404	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001096;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001096;transcript_name=CHM13_chrY_T0001096;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001096:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10341308	10354386	1000	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001097;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001097;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001097;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10341308	10341695	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001097;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001097;transcript_name=CHM13_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001097:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10341696	10342296	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001097;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001097;transcript_name=CHM13_chrY_T0001097;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001097:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001097;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001097;transcript_name=CHM13_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001097:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001097;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001097;transcript_name=CHM13_chrY_T0001097;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001097:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001097;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001097;transcript_name=CHM13_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001097:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001097;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001097;transcript_name=CHM13_chrY_T0001097;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001097:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001097;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001097;transcript_name=CHM13_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001097:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10349490	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001097;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001097;transcript_name=CHM13_chrY_T0001097;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001097:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001097;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001097;transcript_name=CHM13_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001097:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10354224	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001097;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001097;transcript_name=CHM13_chrY_T0001097;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001097:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354225	10354386	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001097;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001097;transcript_name=CHM13_chrY_T0001097;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001097:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10341489	10354365	1000	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001098;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001098;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001098;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10341489	10341695	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001098;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001098;transcript_name=CHM13_chrY_T0001098;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001098:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10341696	10342296	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001098;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001098;transcript_name=CHM13_chrY_T0001098;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001098:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001098;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001098;transcript_name=CHM13_chrY_T0001098;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001098:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001098;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001098;transcript_name=CHM13_chrY_T0001098;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001098:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001098;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001098;transcript_name=CHM13_chrY_T0001098;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001098:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001098;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001098;transcript_name=CHM13_chrY_T0001098;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001098:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001098;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001098;transcript_name=CHM13_chrY_T0001098;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001098:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10353189	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001098;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001098;transcript_name=CHM13_chrY_T0001098;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001098:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001098;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001098;transcript_name=CHM13_chrY_T0001098;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001098:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354224	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001098;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001098;transcript_name=CHM13_chrY_T0001098;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001098:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354225	10354365	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001098;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001098;transcript_name=CHM13_chrY_T0001098;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001098:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10342073	10354386	1000	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001100;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10342073	10342385	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001100;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001100:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001100;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001100:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001100;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001100:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10345611	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001100;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001100:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345720	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001100;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001100:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345721	10349490	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001100;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001100:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001100;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001100:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10352656	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001100;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001100:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10352657	10352757	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001100;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001100:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10352758	10353189	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001100;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001100:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001100;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001100:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354255	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001100;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001100:5;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354256	10354386	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001100;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001100;transcript_name=CHM13_chrY_T0001100;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001100:6;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10348430	10354379	1000	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001101;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001101;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001101;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10348430	10348617	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001101;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001101;transcript_name=CHM13_chrY_T0001101;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001101:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10348618	10349490	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001101;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001101;transcript_name=CHM13_chrY_T0001101;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001101:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001101;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001101;transcript_name=CHM13_chrY_T0001101;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001101:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10352656	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001101;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001101;transcript_name=CHM13_chrY_T0001101;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001101:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10352657	10352757	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001101;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001101;transcript_name=CHM13_chrY_T0001101;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001101:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10352758	10353189	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001101;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001101;transcript_name=CHM13_chrY_T0001101;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001101:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001101;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001101;transcript_name=CHM13_chrY_T0001101;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001101:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354224	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001101;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001101;transcript_name=CHM13_chrY_T0001101;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001101:3;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354225	10354379	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001101;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001101;transcript_name=CHM13_chrY_T0001101;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001101:4;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	10348957	10354369	1000	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001102;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_G0000354;transcript_name=CHM13_chrY_T0001102;gene_name=ENSG00000290344;ID=CHM13_chrY_T0001102;Name=ENSG00000290344
CHM13_chrY	CAT	exon	10348957	10349668	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001102;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001102;transcript_name=CHM13_chrY_T0001102;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001102:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10353189	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001102;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001102;transcript_name=CHM13_chrY_T0001102;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001102:0;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001102;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001102;transcript_name=CHM13_chrY_T0001102;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001102:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10353290	10354224	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001102;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001102;transcript_name=CHM13_chrY_T0001102;gene_name=ENSG00000290344;ID=intron:CHM13_chrY_T0001102:1;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10354225	10354369	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=CHM13_chrY_T0001102;gene_id=CHM13_chrY_G0000354;Parent=CHM13_chrY_T0001102;transcript_name=CHM13_chrY_T0001102;gene_name=ENSG00000290344;ID=exon:CHM13_chrY_T0001102:2;Name=ENSG00000290344;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10341591	10353289	.	-	.	source_gene_common_name=RBMY2QP;source_gene=ENSG00000236718.5;gene_id=CHM13_chrY_G0000355;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2QP;gene_sources=liftoff;ID=CHM13_chrY_G0000355;Name=RBMY2QP
CHM13_chrY	CAT	transcript	10341591	10353289	1000	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_G0000355;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=CHM13_chrY_T0001099;Name=RBMY2QP
CHM13_chrY	CAT	exon	10341591	10341891	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=exon:CHM13_chrY_T0001099:0;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10341892	10342296	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=intron:CHM13_chrY_T0001099:0;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342297	10342385	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=exon:CHM13_chrY_T0001099:1;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342386	10342471	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=intron:CHM13_chrY_T0001099:1;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10342472	10342582	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=exon:CHM13_chrY_T0001099:2;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10342583	10343458	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=intron:CHM13_chrY_T0001099:2;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10343459	10343573	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=exon:CHM13_chrY_T0001099:3;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10343574	10345611	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=intron:CHM13_chrY_T0001099:3;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10345612	10345763	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=exon:CHM13_chrY_T0001099:4;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10345764	10349490	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=intron:CHM13_chrY_T0001099:4;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10349491	10349668	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=exon:CHM13_chrY_T0001099:5;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10349669	10352656	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=intron:CHM13_chrY_T0001099:5;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10352657	10352757	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=exon:CHM13_chrY_T0001099:6;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10352758	10353189	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=intron:CHM13_chrY_T0001099:6;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10353190	10353289	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=CHM13_chrY_T0001099;gene_id=CHM13_chrY_G0000355;Parent=CHM13_chrY_T0001099;transcript_name=CHM13_chrY_T0001099;gene_name=RBMY2QP;ID=exon:CHM13_chrY_T0001099:7;Name=RBMY2QP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10355297	10357477	.	+	.	source_gene_common_name=TSPY20P;source_gene=ENSG00000243643.1;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;gene_id=CHM13_chrY_G0000356;gene_biotype=unprocessed_pseudogene;gene_name=TSPY20P;gene_sources=liftoff;ID=CHM13_chrY_G0000356;Name=TSPY20P
CHM13_chrY	CAT	transcript	10355297	10357477	1000	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=CHM13_chrY_T0001103;gene_id=CHM13_chrY_G0000356;Parent=CHM13_chrY_G0000356;transcript_name=CHM13_chrY_T0001103;gene_name=TSPY20P;ID=CHM13_chrY_T0001103;Name=TSPY20P
CHM13_chrY	CAT	exon	10355297	10355654	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=CHM13_chrY_T0001103;gene_id=CHM13_chrY_G0000356;Parent=CHM13_chrY_T0001103;transcript_name=CHM13_chrY_T0001103;gene_name=TSPY20P;ID=exon:CHM13_chrY_T0001103:0;Name=TSPY20P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10355655	10357000	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=CHM13_chrY_T0001103;gene_id=CHM13_chrY_G0000356;Parent=CHM13_chrY_T0001103;transcript_name=CHM13_chrY_T0001103;gene_name=TSPY20P;ID=intron:CHM13_chrY_T0001103:0;Name=TSPY20P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10357001	10357069	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=CHM13_chrY_T0001103;gene_id=CHM13_chrY_G0000356;Parent=CHM13_chrY_T0001103;transcript_name=CHM13_chrY_T0001103;gene_name=TSPY20P;ID=exon:CHM13_chrY_T0001103:1;Name=TSPY20P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10357070	10357164	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=CHM13_chrY_T0001103;gene_id=CHM13_chrY_G0000356;Parent=CHM13_chrY_T0001103;transcript_name=CHM13_chrY_T0001103;gene_name=TSPY20P;ID=intron:CHM13_chrY_T0001103:1;Name=TSPY20P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10357165	10357310	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=CHM13_chrY_T0001103;gene_id=CHM13_chrY_G0000356;Parent=CHM13_chrY_T0001103;transcript_name=CHM13_chrY_T0001103;gene_name=TSPY20P;ID=exon:CHM13_chrY_T0001103:2;Name=TSPY20P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10357311	10357420	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=CHM13_chrY_T0001103;gene_id=CHM13_chrY_G0000356;Parent=CHM13_chrY_T0001103;transcript_name=CHM13_chrY_T0001103;gene_name=TSPY20P;ID=intron:CHM13_chrY_T0001103:2;Name=TSPY20P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10357421	10357477	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1,ENST00000450910.1;transcript_id=CHM13_chrY_T0001103;gene_id=CHM13_chrY_G0000356;Parent=CHM13_chrY_T0001103;transcript_name=CHM13_chrY_T0001103;gene_name=TSPY20P;ID=exon:CHM13_chrY_T0001103:3;Name=TSPY20P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10385659	10386491	.	-	.	source_gene_common_name=ENSG00000290378;source_gene=ENSG00000290378.1;gene_id=CHM13_chrY_G0000357;gene_biotype=lncRNA;gene_name=ENSG00000290378;gene_sources=liftoff;ID=CHM13_chrY_G0000357;Name=ENSG00000290378
CHM13_chrY	CAT	transcript	10385659	10386491	1000	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=CHM13_chrY_T0001104;gene_id=CHM13_chrY_G0000357;Parent=CHM13_chrY_G0000357;transcript_name=CHM13_chrY_T0001104;gene_name=ENSG00000290378;ID=CHM13_chrY_T0001104;Name=ENSG00000290378
CHM13_chrY	CAT	exon	10385659	10385714	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=CHM13_chrY_T0001104;gene_id=CHM13_chrY_G0000357;Parent=CHM13_chrY_T0001104;transcript_name=CHM13_chrY_T0001104;gene_name=ENSG00000290378;ID=exon:CHM13_chrY_T0001104:0;Name=ENSG00000290378;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10385715	10386405	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=CHM13_chrY_T0001104;gene_id=CHM13_chrY_G0000357;Parent=CHM13_chrY_T0001104;transcript_name=CHM13_chrY_T0001104;gene_name=ENSG00000290378;ID=intron:CHM13_chrY_T0001104:0;Name=ENSG00000290378;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10386406	10386491	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=CHM13_chrY_T0001104;gene_id=CHM13_chrY_G0000357;Parent=CHM13_chrY_T0001104;transcript_name=CHM13_chrY_T0001104;gene_name=ENSG00000290378;ID=exon:CHM13_chrY_T0001104:1;Name=ENSG00000290378;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10385692	10388268	.	-	.	source_gene_common_name=TSPY5P;source_gene=ENSG00000225685.2;gene_id=CHM13_chrY_G0000358;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY5P;gene_sources=liftoff;ID=CHM13_chrY_G0000358;Name=TSPY5P
CHM13_chrY	CAT	transcript	10385692	10388268	1000	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=CHM13_chrY_T0001105;gene_id=CHM13_chrY_G0000358;Parent=CHM13_chrY_G0000358;transcript_name=CHM13_chrY_T0001105;gene_name=TSPY5P;ID=CHM13_chrY_T0001105;Name=TSPY5P
CHM13_chrY	CAT	exon	10385692	10385714	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=CHM13_chrY_T0001105;gene_id=CHM13_chrY_G0000358;Parent=CHM13_chrY_T0001105;transcript_name=CHM13_chrY_T0001105;gene_name=TSPY5P;ID=exon:CHM13_chrY_T0001105:0;Name=TSPY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10385715	10386405	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=CHM13_chrY_T0001105;gene_id=CHM13_chrY_G0000358;Parent=CHM13_chrY_T0001105;transcript_name=CHM13_chrY_T0001105;gene_name=TSPY5P;ID=intron:CHM13_chrY_T0001105:0;Name=TSPY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10386406	10386487	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=CHM13_chrY_T0001105;gene_id=CHM13_chrY_G0000358;Parent=CHM13_chrY_T0001105;transcript_name=CHM13_chrY_T0001105;gene_name=TSPY5P;ID=exon:CHM13_chrY_T0001105:1;Name=TSPY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10386488	10386593	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=CHM13_chrY_T0001105;gene_id=CHM13_chrY_G0000358;Parent=CHM13_chrY_T0001105;transcript_name=CHM13_chrY_T0001105;gene_name=TSPY5P;ID=intron:CHM13_chrY_T0001105:1;Name=TSPY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10386594	10386739	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=CHM13_chrY_T0001105;gene_id=CHM13_chrY_G0000358;Parent=CHM13_chrY_T0001105;transcript_name=CHM13_chrY_T0001105;gene_name=TSPY5P;ID=exon:CHM13_chrY_T0001105:2;Name=TSPY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10386740	10386836	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=CHM13_chrY_T0001105;gene_id=CHM13_chrY_G0000358;Parent=CHM13_chrY_T0001105;transcript_name=CHM13_chrY_T0001105;gene_name=TSPY5P;ID=intron:CHM13_chrY_T0001105:2;Name=TSPY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10386837	10386948	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=CHM13_chrY_T0001105;gene_id=CHM13_chrY_G0000358;Parent=CHM13_chrY_T0001105;transcript_name=CHM13_chrY_T0001105;gene_name=TSPY5P;ID=exon:CHM13_chrY_T0001105:3;Name=TSPY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10386949	10387076	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=CHM13_chrY_T0001105;gene_id=CHM13_chrY_G0000358;Parent=CHM13_chrY_T0001105;transcript_name=CHM13_chrY_T0001105;gene_name=TSPY5P;ID=intron:CHM13_chrY_T0001105:3;Name=TSPY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10387077	10387154	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=CHM13_chrY_T0001105;gene_id=CHM13_chrY_G0000358;Parent=CHM13_chrY_T0001105;transcript_name=CHM13_chrY_T0001105;gene_name=TSPY5P;ID=exon:CHM13_chrY_T0001105:4;Name=TSPY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	10387155	10387761	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=CHM13_chrY_T0001105;gene_id=CHM13_chrY_G0000358;Parent=CHM13_chrY_T0001105;transcript_name=CHM13_chrY_T0001105;gene_name=TSPY5P;ID=intron:CHM13_chrY_T0001105:4;Name=TSPY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	10387762	10388268	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=CHM13_chrY_T0001105;gene_id=CHM13_chrY_G0000358;Parent=CHM13_chrY_T0001105;transcript_name=CHM13_chrY_T0001105;gene_name=TSPY5P;ID=exon:CHM13_chrY_T0001105:5;Name=TSPY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10389248	10389526	.	+	.	source_gene_common_name=ENSG00000278478;source_gene=ENSG00000278478.1;alternative_source_transcripts=ENST00000430032.3,ENST00000430032.3;gene_id=CHM13_chrY_G0000359;gene_biotype=processed_pseudogene;gene_name=ENSG00000278478;gene_sources=liftoff;ID=CHM13_chrY_G0000359;Name=ENSG00000278478
CHM13_chrY	CAT	transcript	10389248	10389526	1000	+	.	source_transcript=ENST00000430032.3;source_transcript_name=ENST00000430032;source_gene=ENSG00000278478.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278478.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430032.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000430032.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278478;alternative_source_transcripts=ENST00000430032.3,ENST00000430032.3;transcript_id=CHM13_chrY_T0001106;gene_id=CHM13_chrY_G0000359;Parent=CHM13_chrY_G0000359;transcript_name=CHM13_chrY_T0001106;gene_name=ENSG00000278478;ID=CHM13_chrY_T0001106;Name=ENSG00000278478
CHM13_chrY	CAT	exon	10389248	10389526	.	+	.	source_transcript=ENST00000430032.3;source_transcript_name=ENST00000430032;source_gene=ENSG00000278478.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278478.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430032.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000430032.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278478;alternative_source_transcripts=ENST00000430032.3,ENST00000430032.3;transcript_id=CHM13_chrY_T0001106;gene_id=CHM13_chrY_G0000359;Parent=CHM13_chrY_T0001106;transcript_name=CHM13_chrY_T0001106;gene_name=ENSG00000278478;ID=exon:CHM13_chrY_T0001106:0;Name=ENSG00000278478;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10409527	10409645	.	-	.	source_gene_common_name=RNA5SP518;source_gene=ENSG00000251766.1;alternative_source_transcripts=ENST00000515957.1,ENST00000515957.1;gene_id=CHM13_chrY_G0000360;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP518;gene_sources=liftoff;ID=CHM13_chrY_G0000360;Name=RNA5SP518
CHM13_chrY	CAT	transcript	10409527	10409645	1000	-	.	source_transcript=ENST00000515957.1;source_transcript_name=RNA5SP518-201;source_gene=ENSG00000251766.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251766.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515957.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP518;alternative_source_transcripts=ENST00000515957.1,ENST00000515957.1;transcript_id=CHM13_chrY_T0001107;gene_id=CHM13_chrY_G0000360;Parent=CHM13_chrY_G0000360;transcript_name=CHM13_chrY_T0001107;gene_name=RNA5SP518;ID=CHM13_chrY_T0001107;Name=RNA5SP518
CHM13_chrY	CAT	exon	10409527	10409645	.	-	.	source_transcript=ENST00000515957.1;source_transcript_name=RNA5SP518-201;source_gene=ENSG00000251766.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251766.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515957.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP518;alternative_source_transcripts=ENST00000515957.1,ENST00000515957.1;transcript_id=CHM13_chrY_T0001107;gene_id=CHM13_chrY_G0000360;Parent=CHM13_chrY_T0001107;transcript_name=CHM13_chrY_T0001107;gene_name=RNA5SP518;ID=exon:CHM13_chrY_T0001107:0;Name=RNA5SP518;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10411992	10412110	.	-	.	source_gene_common_name=RNA5SP519;source_gene=ENSG00000252289.1;alternative_source_transcripts=ENST00000516480.1,ENST00000516480.1;gene_id=CHM13_chrY_G0000361;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP519;gene_sources=liftoff;ID=CHM13_chrY_G0000361;Name=RNA5SP519
CHM13_chrY	CAT	transcript	10411992	10412110	1000	-	.	source_transcript=ENST00000516480.1;source_transcript_name=RNA5SP519-201;source_gene=ENSG00000252289.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252289.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516480.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP519;alternative_source_transcripts=ENST00000516480.1,ENST00000516480.1;transcript_id=CHM13_chrY_T0001108;gene_id=CHM13_chrY_G0000361;Parent=CHM13_chrY_G0000361;transcript_name=CHM13_chrY_T0001108;gene_name=RNA5SP519;ID=CHM13_chrY_T0001108;Name=RNA5SP519
CHM13_chrY	CAT	exon	10411992	10412110	.	-	.	source_transcript=ENST00000516480.1;source_transcript_name=RNA5SP519-201;source_gene=ENSG00000252289.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252289.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516480.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP519;alternative_source_transcripts=ENST00000516480.1,ENST00000516480.1;transcript_id=CHM13_chrY_T0001108;gene_id=CHM13_chrY_G0000361;Parent=CHM13_chrY_T0001108;transcript_name=CHM13_chrY_T0001108;gene_name=RNA5SP519;ID=exon:CHM13_chrY_T0001108:0;Name=RNA5SP519;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10490705	10491840	.	-	.	source_gene_common_name=DUX4L31;source_gene=ENSG00000231411.1;alternative_source_transcripts=ENST00000446466.1,ENST00000446466.1;gene_id=CHM13_chrY_G0000362;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L31;gene_sources=liftoff;ID=CHM13_chrY_G0000362;Name=DUX4L31
CHM13_chrY	CAT	transcript	10490705	10491840	1000	-	.	source_transcript=ENST00000446466.1;source_transcript_name=DUX4L31-201;source_gene=ENSG00000231411.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231411.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446466.1;transcript_score=199.912;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L31;alternative_source_transcripts=ENST00000446466.1,ENST00000446466.1;transcript_id=CHM13_chrY_T0001109;gene_id=CHM13_chrY_G0000362;Parent=CHM13_chrY_G0000362;transcript_name=CHM13_chrY_T0001109;gene_name=DUX4L31;ID=CHM13_chrY_T0001109;Name=DUX4L31
CHM13_chrY	CAT	exon	10490705	10491840	.	-	.	source_transcript=ENST00000446466.1;source_transcript_name=DUX4L31-201;source_gene=ENSG00000231411.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231411.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446466.1;transcript_score=199.912;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L31;alternative_source_transcripts=ENST00000446466.1,ENST00000446466.1;transcript_id=CHM13_chrY_T0001109;gene_id=CHM13_chrY_G0000362;Parent=CHM13_chrY_T0001109;transcript_name=CHM13_chrY_T0001109;gene_name=DUX4L31;ID=exon:CHM13_chrY_T0001109:0;Name=DUX4L31;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10492968	10493322	.	+	.	source_gene_common_name=PCMTD1P1;source_gene=ENSG00000226061.1;alternative_source_transcripts=ENST00000455560.1,ENST00000455560.1;gene_id=CHM13_chrY_G0000363;gene_biotype=unprocessed_pseudogene;gene_name=PCMTD1P1;gene_sources=liftoff;ID=CHM13_chrY_G0000363;Name=PCMTD1P1
CHM13_chrY	CAT	transcript	10492968	10493322	1000	+	.	source_transcript=ENST00000455560.1;source_transcript_name=PCMTD1P1-201;source_gene=ENSG00000226061.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226061.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455560.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455560.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCMTD1P1;alternative_source_transcripts=ENST00000455560.1,ENST00000455560.1;transcript_id=CHM13_chrY_T0001110;gene_id=CHM13_chrY_G0000363;Parent=CHM13_chrY_G0000363;transcript_name=CHM13_chrY_T0001110;gene_name=PCMTD1P1;ID=CHM13_chrY_T0001110;Name=PCMTD1P1
CHM13_chrY	CAT	exon	10492968	10493322	.	+	.	source_transcript=ENST00000455560.1;source_transcript_name=PCMTD1P1-201;source_gene=ENSG00000226061.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226061.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455560.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455560.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCMTD1P1;alternative_source_transcripts=ENST00000455560.1,ENST00000455560.1;transcript_id=CHM13_chrY_T0001110;gene_id=CHM13_chrY_G0000363;Parent=CHM13_chrY_T0001110;transcript_name=CHM13_chrY_T0001110;gene_name=PCMTD1P1;ID=exon:CHM13_chrY_T0001110:0;Name=PCMTD1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10509505	10511426	.	-	.	source_gene_common_name=CDC27P2;source_gene=ENSG00000237447.1;alternative_source_transcripts=ENST00000425026.1,ENST00000425026.1;gene_id=CHM13_chrY_G0000364;gene_biotype=processed_pseudogene;gene_name=CDC27P2;gene_sources=liftoff;ID=CHM13_chrY_G0000364;Name=CDC27P2
CHM13_chrY	CAT	transcript	10509505	10511426	1000	-	.	source_transcript=ENST00000425026.1;source_transcript_name=CDC27P2-201;source_gene=ENSG00000237447.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237447.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425026.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDC27P2;alternative_source_transcripts=ENST00000425026.1,ENST00000425026.1;transcript_id=CHM13_chrY_T0001111;gene_id=CHM13_chrY_G0000364;Parent=CHM13_chrY_G0000364;transcript_name=CHM13_chrY_T0001111;gene_name=CDC27P2;ID=CHM13_chrY_T0001111;Name=CDC27P2
CHM13_chrY	CAT	exon	10509505	10511426	.	-	.	source_transcript=ENST00000425026.1;source_transcript_name=CDC27P2-201;source_gene=ENSG00000237447.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237447.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425026.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDC27P2;alternative_source_transcripts=ENST00000425026.1,ENST00000425026.1;transcript_id=CHM13_chrY_T0001111;gene_id=CHM13_chrY_G0000364;Parent=CHM13_chrY_T0001111;transcript_name=CHM13_chrY_T0001111;gene_name=CDC27P2;ID=exon:CHM13_chrY_T0001111:0;Name=CDC27P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10516384	10518231	.	-	.	source_gene_common_name=ENSG00000225840;source_gene=ENSG00000225840.2;alternative_source_transcripts=ENST00000445125.2;gene_id=CHM13_chrY_G0000365;gene_biotype=processed_pseudogene;gene_name=ENSG00000225840;gene_sources=liftoff;ID=CHM13_chrY_G0000365;Name=ENSG00000225840
CHM13_chrY	CAT	transcript	10516384	10518231	1000	-	.	source_transcript=ENST00000445125.2;source_transcript_name=ENST00000445125;source_gene=ENSG00000225840.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225840.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445125.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445125.2;transcript_score=199.946;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225840;alternative_source_transcripts=ENST00000445125.2;transcript_id=CHM13_chrY_T0001112;gene_id=CHM13_chrY_G0000365;Parent=CHM13_chrY_G0000365;transcript_name=CHM13_chrY_T0001112;gene_name=ENSG00000225840;ID=CHM13_chrY_T0001112;Name=ENSG00000225840
CHM13_chrY	CAT	exon	10516384	10518231	.	-	.	source_transcript=ENST00000445125.2;source_transcript_name=ENST00000445125;source_gene=ENSG00000225840.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225840.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445125.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445125.2;transcript_score=199.946;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225840;alternative_source_transcripts=ENST00000445125.2;transcript_id=CHM13_chrY_T0001112;gene_id=CHM13_chrY_G0000365;Parent=CHM13_chrY_T0001112;transcript_name=CHM13_chrY_T0001112;gene_name=ENSG00000225840;ID=exon:CHM13_chrY_T0001112:0;Name=ENSG00000225840;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	10519283	10519434	.	+	.	source_gene_common_name=RNA5-8SP6;source_gene=ENSG00000251705.1;alternative_source_transcripts=ENST00000515896.1;gene_id=CHM13_chrY_G0000366;gene_biotype=rRNA_pseudogene;gene_name=RNA5-8SP6;gene_sources=liftoff;ID=CHM13_chrY_G0000366;Name=RNA5-8SP6
CHM13_chrY	CAT	transcript	10519283	10519434	1000	+	.	source_transcript=ENST00000515896.1;source_transcript_name=RNA5-8SP6-201;source_gene=ENSG00000251705.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251705.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515896.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5-8SP6;alternative_source_transcripts=ENST00000515896.1;transcript_id=CHM13_chrY_T0001113;gene_id=CHM13_chrY_G0000366;Parent=CHM13_chrY_G0000366;transcript_name=CHM13_chrY_T0001113;gene_name=RNA5-8SP6;ID=CHM13_chrY_T0001113;Name=RNA5-8SP6
CHM13_chrY	CAT	exon	10519283	10519434	.	+	.	source_transcript=ENST00000515896.1;source_transcript_name=RNA5-8SP6-201;source_gene=ENSG00000251705.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251705.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515896.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5-8SP6;alternative_source_transcripts=ENST00000515896.1;transcript_id=CHM13_chrY_T0001113;gene_id=CHM13_chrY_G0000366;Parent=CHM13_chrY_T0001113;transcript_name=CHM13_chrY_T0001113;gene_name=RNA5-8SP6;ID=exon:CHM13_chrY_T0001113:0;Name=RNA5-8SP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11263699	11263920	.	-	.	source_gene_common_name=ENSG00000273858;source_gene=ENSG00000273858.1;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;gene_id=CHM13_chrY_G0000367;gene_biotype=processed_pseudogene;gene_name=ENSG00000273858;gene_sources=liftoff;ID=CHM13_chrY_G0000367;Name=ENSG00000273858
CHM13_chrY	CAT	transcript	11263699	11263920	1000	-	.	source_transcript=ENST00000622087.1;source_transcript_name=ENST00000622087;source_gene=ENSG00000273858.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273858.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622087.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273858;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;transcript_id=CHM13_chrY_T0001114;gene_id=CHM13_chrY_G0000367;Parent=CHM13_chrY_G0000367;transcript_name=CHM13_chrY_T0001114;gene_name=ENSG00000273858;ID=CHM13_chrY_T0001114;Name=ENSG00000273858
CHM13_chrY	CAT	exon	11263699	11263920	.	-	.	source_transcript=ENST00000622087.1;source_transcript_name=ENST00000622087;source_gene=ENSG00000273858.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273858.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622087.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273858;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;transcript_id=CHM13_chrY_T0001114;gene_id=CHM13_chrY_G0000367;Parent=CHM13_chrY_T0001114;transcript_name=CHM13_chrY_T0001114;gene_name=ENSG00000273858;ID=exon:CHM13_chrY_T0001114:0;Name=ENSG00000273858;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11306858	11307443	.	-	.	source_gene_common_name=CDRT15P10;source_gene=ENSG00000273693.1;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;gene_id=CHM13_chrY_G0000368;gene_biotype=processed_pseudogene;gene_name=CDRT15P10;gene_sources=liftoff;ID=CHM13_chrY_G0000368;Name=CDRT15P10
CHM13_chrY	CAT	transcript	11306858	11307443	1000	-	.	source_transcript=ENST00000618128.1;source_transcript_name=CDRT15P10-201;source_gene=ENSG00000273693.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273693.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618128.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDRT15P10;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;transcript_id=CHM13_chrY_T0001115;gene_id=CHM13_chrY_G0000368;Parent=CHM13_chrY_G0000368;transcript_name=CHM13_chrY_T0001115;gene_name=CDRT15P10;ID=CHM13_chrY_T0001115;Name=CDRT15P10
CHM13_chrY	CAT	exon	11306858	11307443	.	-	.	source_transcript=ENST00000618128.1;source_transcript_name=CDRT15P10-201;source_gene=ENSG00000273693.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273693.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618128.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDRT15P10;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;transcript_id=CHM13_chrY_T0001115;gene_id=CHM13_chrY_G0000368;Parent=CHM13_chrY_T0001115;transcript_name=CHM13_chrY_T0001115;gene_name=CDRT15P10;ID=exon:CHM13_chrY_T0001115:0;Name=CDRT15P10;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11328445	11328643	.	-	.	source_gene_common_name=ENSG00000271365;source_gene=ENSG00000271365.1;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;gene_id=CHM13_chrY_G0000369;gene_biotype=processed_pseudogene;gene_name=ENSG00000271365;gene_sources=liftoff;ID=CHM13_chrY_G0000369;Name=ENSG00000271365
CHM13_chrY	CAT	transcript	11328445	11328643	1000	-	.	source_transcript=ENST00000605663.1;source_transcript_name=ENST00000605663;source_gene=ENSG00000271365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605663.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271365;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;transcript_id=CHM13_chrY_T0001116;gene_id=CHM13_chrY_G0000369;Parent=CHM13_chrY_G0000369;transcript_name=CHM13_chrY_T0001116;gene_name=ENSG00000271365;ID=CHM13_chrY_T0001116;Name=ENSG00000271365
CHM13_chrY	CAT	exon	11328445	11328643	.	-	.	source_transcript=ENST00000605663.1;source_transcript_name=ENST00000605663;source_gene=ENSG00000271365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605663.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271365;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;transcript_id=CHM13_chrY_T0001116;gene_id=CHM13_chrY_G0000369;Parent=CHM13_chrY_T0001116;transcript_name=CHM13_chrY_T0001116;gene_name=ENSG00000271365;ID=exon:CHM13_chrY_T0001116:0;Name=ENSG00000271365;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11328769	11328976	.	-	.	source_gene_common_name=ENSG00000271309;source_gene=ENSG00000271309.1;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;gene_id=CHM13_chrY_G0000370;gene_biotype=processed_pseudogene;gene_name=ENSG00000271309;gene_sources=liftoff;ID=CHM13_chrY_G0000370;Name=ENSG00000271309
CHM13_chrY	CAT	transcript	11328769	11328976	1000	-	.	source_transcript=ENST00000604370.1;source_transcript_name=ENST00000604370;source_gene=ENSG00000271309.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271309.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604370.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271309;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;transcript_id=CHM13_chrY_T0001117;gene_id=CHM13_chrY_G0000370;Parent=CHM13_chrY_G0000370;transcript_name=CHM13_chrY_T0001117;gene_name=ENSG00000271309;ID=CHM13_chrY_T0001117;Name=ENSG00000271309
CHM13_chrY	CAT	exon	11328769	11328976	.	-	.	source_transcript=ENST00000604370.1;source_transcript_name=ENST00000604370;source_gene=ENSG00000271309.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271309.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604370.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271309;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;transcript_id=CHM13_chrY_T0001117;gene_id=CHM13_chrY_G0000370;Parent=CHM13_chrY_T0001117;transcript_name=CHM13_chrY_T0001117;gene_name=ENSG00000271309;ID=exon:CHM13_chrY_T0001117:0;Name=ENSG00000271309;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11329099	11329267	.	-	.	source_gene_common_name=ENSG00000270570;source_gene=ENSG00000270570.1;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;gene_id=CHM13_chrY_G0000371;gene_biotype=processed_pseudogene;gene_name=ENSG00000270570;gene_sources=liftoff;ID=CHM13_chrY_G0000371;Name=ENSG00000270570
CHM13_chrY	CAT	transcript	11329099	11329267	1000	-	.	source_transcript=ENST00000603467.1;source_transcript_name=ENST00000603467;source_gene=ENSG00000270570.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270570.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603467.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000270570;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;transcript_id=CHM13_chrY_T0001118;gene_id=CHM13_chrY_G0000371;Parent=CHM13_chrY_G0000371;transcript_name=CHM13_chrY_T0001118;gene_name=ENSG00000270570;ID=CHM13_chrY_T0001118;Name=ENSG00000270570
CHM13_chrY	CAT	exon	11329099	11329267	.	-	.	source_transcript=ENST00000603467.1;source_transcript_name=ENST00000603467;source_gene=ENSG00000270570.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270570.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603467.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000270570;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;transcript_id=CHM13_chrY_T0001118;gene_id=CHM13_chrY_G0000371;Parent=CHM13_chrY_T0001118;transcript_name=CHM13_chrY_T0001118;gene_name=ENSG00000270570;ID=exon:CHM13_chrY_T0001118:0;Name=ENSG00000270570;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11337665	11436383	.	-	.	source_gene_common_name=ENSG00000291032;source_gene=ENSG00000291032.2;gene_id=CHM13_chrY_G0000372;gene_biotype=lncRNA;gene_name=ENSG00000291032;gene_sources=liftoff;ID=CHM13_chrY_G0000372;Name=ENSG00000291032
CHM13_chrY	CAT	transcript	11337665	11436382	1000	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001119;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001119;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001119;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11337665	11337814	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001119;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001119;transcript_name=CHM13_chrY_T0001119;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001119:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11337815	11364690	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001119;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001119;transcript_name=CHM13_chrY_T0001119;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001119:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11364691	11364725	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001119;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001119;transcript_name=CHM13_chrY_T0001119;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001119:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11364726	11434102	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001119;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001119;transcript_name=CHM13_chrY_T0001119;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001119:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001119;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001119;transcript_name=CHM13_chrY_T0001119;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001119:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001119;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001119;transcript_name=CHM13_chrY_T0001119;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001119:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436382	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001119;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001119;transcript_name=CHM13_chrY_T0001119;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001119:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11345574	11436386	1000	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001120;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001120;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001120;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11345574	11345697	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001120;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001120;transcript_name=CHM13_chrY_T0001120;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001120:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11345698	11434102	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001120;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001120;transcript_name=CHM13_chrY_T0001120;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001120:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001120;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001120;transcript_name=CHM13_chrY_T0001120;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001120:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001120;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001120;transcript_name=CHM13_chrY_T0001120;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001120:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436386	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001120;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001120;transcript_name=CHM13_chrY_T0001120;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001120:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11348497	11436382	1000	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001121;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001121;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001121;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11348497	11348755	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001121;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001121;transcript_name=CHM13_chrY_T0001121;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001121:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11348756	11434102	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001121;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001121;transcript_name=CHM13_chrY_T0001121;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001121:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001121;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001121;transcript_name=CHM13_chrY_T0001121;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001121:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001121;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001121;transcript_name=CHM13_chrY_T0001121;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001121:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436382	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001121;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001121;transcript_name=CHM13_chrY_T0001121;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001121:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11348502	11434161	1000	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001122;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001122;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001122;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11348502	11348755	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001122;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001122;transcript_name=CHM13_chrY_T0001122;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001122:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11348756	11364690	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001122;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001122;transcript_name=CHM13_chrY_T0001122;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001122:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11364691	11364725	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001122;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001122;transcript_name=CHM13_chrY_T0001122;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001122:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11364726	11434102	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001122;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001122;transcript_name=CHM13_chrY_T0001122;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001122:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001122;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001122;transcript_name=CHM13_chrY_T0001122;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001122:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11375149	11436382	1000	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001124;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001124;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001124;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11375149	11375427	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001124;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001124;transcript_name=CHM13_chrY_T0001124;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001124:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11375428	11375951	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001124;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001124;transcript_name=CHM13_chrY_T0001124;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001124:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11375952	11375972	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001124;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001124;transcript_name=CHM13_chrY_T0001124;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001124:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11375973	11377010	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001124;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001124;transcript_name=CHM13_chrY_T0001124;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001124:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11377011	11377241	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001124;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001124;transcript_name=CHM13_chrY_T0001124;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001124:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11377242	11434102	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001124;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001124;transcript_name=CHM13_chrY_T0001124;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001124:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001124;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001124;transcript_name=CHM13_chrY_T0001124;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001124:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001124;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001124;transcript_name=CHM13_chrY_T0001124;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001124:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436382	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001124;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001124;transcript_name=CHM13_chrY_T0001124;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001124:4;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11375149	11436385	1000	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001125;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001125;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001125;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11375149	11375457	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001125;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001125;transcript_name=CHM13_chrY_T0001125;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001125:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11375458	11377010	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001125;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001125;transcript_name=CHM13_chrY_T0001125;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001125:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11377011	11377241	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001125;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001125;transcript_name=CHM13_chrY_T0001125;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001125:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11377242	11434102	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001125;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001125;transcript_name=CHM13_chrY_T0001125;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001125:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001125;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001125;transcript_name=CHM13_chrY_T0001125;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001125:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001125;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001125;transcript_name=CHM13_chrY_T0001125;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001125:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436385	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001125;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001125;transcript_name=CHM13_chrY_T0001125;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001125:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11375154	11436377	1000	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001126;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001126;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001126;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11375154	11375427	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001126;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001126;transcript_name=CHM13_chrY_T0001126;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001126:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11375428	11377010	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001126;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001126;transcript_name=CHM13_chrY_T0001126;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001126:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11377011	11377241	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001126;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001126;transcript_name=CHM13_chrY_T0001126;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001126:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11377242	11434102	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001126;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001126;transcript_name=CHM13_chrY_T0001126;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001126:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001126;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001126;transcript_name=CHM13_chrY_T0001126;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001126:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001126;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001126;transcript_name=CHM13_chrY_T0001126;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001126:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436377	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001126;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001126;transcript_name=CHM13_chrY_T0001126;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001126:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11375154	11436358	1000	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001127;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001127;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001127;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11375154	11375457	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001127;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001127;transcript_name=CHM13_chrY_T0001127;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001127:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11375458	11375951	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001127;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001127;transcript_name=CHM13_chrY_T0001127;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001127:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11375952	11376139	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001127;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001127;transcript_name=CHM13_chrY_T0001127;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001127:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11376140	11376242	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001127;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001127;transcript_name=CHM13_chrY_T0001127;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001127:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11376243	11376520	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001127;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001127;transcript_name=CHM13_chrY_T0001127;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001127:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11376521	11377010	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001127;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001127;transcript_name=CHM13_chrY_T0001127;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001127:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11377011	11377241	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001127;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001127;transcript_name=CHM13_chrY_T0001127;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001127:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11377242	11434102	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001127;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001127;transcript_name=CHM13_chrY_T0001127;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001127:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001127;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001127;transcript_name=CHM13_chrY_T0001127;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001127:4;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001127;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001127;transcript_name=CHM13_chrY_T0001127;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001127:4;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436358	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001127;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001127;transcript_name=CHM13_chrY_T0001127;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001127:5;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11375154	11436335	1000	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001128;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001128;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001128;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11375154	11375457	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001128;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001128;transcript_name=CHM13_chrY_T0001128;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001128:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11375458	11434102	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001128;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001128;transcript_name=CHM13_chrY_T0001128;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001128:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001128;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001128;transcript_name=CHM13_chrY_T0001128;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001128:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001128;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001128;transcript_name=CHM13_chrY_T0001128;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001128:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436335	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001128;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001128;transcript_name=CHM13_chrY_T0001128;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001128:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11375157	11436335	1000	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001129;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001129;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001129;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11375157	11376139	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001129;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001129;transcript_name=CHM13_chrY_T0001129;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001129:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11376140	11377010	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001129;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001129;transcript_name=CHM13_chrY_T0001129;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001129:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11377011	11377241	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001129;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001129;transcript_name=CHM13_chrY_T0001129;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001129:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11377242	11434102	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001129;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001129;transcript_name=CHM13_chrY_T0001129;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001129:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001129;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001129;transcript_name=CHM13_chrY_T0001129;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001129:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001129;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001129;transcript_name=CHM13_chrY_T0001129;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001129:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436335	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001129;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001129;transcript_name=CHM13_chrY_T0001129;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001129:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11375158	11436377	1000	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001130;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001130;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001130;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11375158	11375457	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001130;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001130;transcript_name=CHM13_chrY_T0001130;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001130:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11375458	11376242	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001130;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001130;transcript_name=CHM13_chrY_T0001130;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001130:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11376243	11376397	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001130;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001130;transcript_name=CHM13_chrY_T0001130;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001130:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11376398	11377010	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001130;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001130;transcript_name=CHM13_chrY_T0001130;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001130:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11377011	11377241	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001130;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001130;transcript_name=CHM13_chrY_T0001130;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001130:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11377242	11434102	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001130;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001130;transcript_name=CHM13_chrY_T0001130;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001130:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001130;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001130;transcript_name=CHM13_chrY_T0001130;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001130:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001130;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001130;transcript_name=CHM13_chrY_T0001130;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001130:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436377	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001130;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001130;transcript_name=CHM13_chrY_T0001130;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001130:4;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11376846	11436364	1000	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001132;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001132;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001132;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11376846	11377241	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001132;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001132;transcript_name=CHM13_chrY_T0001132;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001132:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11377242	11434102	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001132;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001132;transcript_name=CHM13_chrY_T0001132;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001132:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001132;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001132;transcript_name=CHM13_chrY_T0001132;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001132:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001132;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001132;transcript_name=CHM13_chrY_T0001132;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001132:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436364	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001132;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001132;transcript_name=CHM13_chrY_T0001132;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001132:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11382999	11436480	1000	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001133;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001133;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001133;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11382999	11384494	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001133;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001133;transcript_name=CHM13_chrY_T0001133;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001133:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11434102	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001133;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001133;transcript_name=CHM13_chrY_T0001133;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001133:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001133;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001133;transcript_name=CHM13_chrY_T0001133;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001133:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001133;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001133;transcript_name=CHM13_chrY_T0001133;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001133:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436480	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001133;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001133;transcript_name=CHM13_chrY_T0001133;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001133:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11383006	11436566	1000	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001134;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001134;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001134;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11383006	11384483	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001134;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001134;transcript_name=CHM13_chrY_T0001134;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001134:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384484	11434102	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001134;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001134;transcript_name=CHM13_chrY_T0001134;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001134:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001134;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001134;transcript_name=CHM13_chrY_T0001134;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001134:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001134;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001134;transcript_name=CHM13_chrY_T0001134;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001134:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436566	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001134;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001134;transcript_name=CHM13_chrY_T0001134;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001134:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11383104	11436398	1000	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001135;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001135;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001135;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11383104	11383896	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001135;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001135;transcript_name=CHM13_chrY_T0001135;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001135:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11383897	11384265	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001135;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001135;transcript_name=CHM13_chrY_T0001135;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001135:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11384266	11384494	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001135;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001135;transcript_name=CHM13_chrY_T0001135;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001135:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11434102	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001135;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001135;transcript_name=CHM13_chrY_T0001135;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001135:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001135;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001135;transcript_name=CHM13_chrY_T0001135;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001135:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001135;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001135;transcript_name=CHM13_chrY_T0001135;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001135:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436398	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001135;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001135;transcript_name=CHM13_chrY_T0001135;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001135:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11383202	11436164	1000	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001136;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001136;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001136;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11383202	11384494	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001136;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001136;transcript_name=CHM13_chrY_T0001136;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001136:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11434102	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001136;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001136;transcript_name=CHM13_chrY_T0001136;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001136:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001136;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001136;transcript_name=CHM13_chrY_T0001136;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001136:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11435573	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001136;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001136;transcript_name=CHM13_chrY_T0001136;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001136:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11435574	11436164	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001136;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001136;transcript_name=CHM13_chrY_T0001136;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001136:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11383202	11436377	1000	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001137;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001137;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001137;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11383202	11384494	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001137;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001137;transcript_name=CHM13_chrY_T0001137;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001137:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11434102	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001137;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001137;transcript_name=CHM13_chrY_T0001137;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001137:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001137;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001137;transcript_name=CHM13_chrY_T0001137;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001137:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11435435	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001137;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001137;transcript_name=CHM13_chrY_T0001137;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001137:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11435436	11435523	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001137;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001137;transcript_name=CHM13_chrY_T0001137;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001137:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11435524	11436296	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001137;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001137;transcript_name=CHM13_chrY_T0001137;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001137:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436377	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001137;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001137;transcript_name=CHM13_chrY_T0001137;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001137:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11383202	11436346	1000	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001138;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001138;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001138;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11383202	11384483	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001138;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001138;transcript_name=CHM13_chrY_T0001138;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001138:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384484	11434102	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001138;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001138;transcript_name=CHM13_chrY_T0001138;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001138:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001138;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001138;transcript_name=CHM13_chrY_T0001138;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001138:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11435704	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001138;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001138;transcript_name=CHM13_chrY_T0001138;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001138:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11435705	11435814	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001138;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001138;transcript_name=CHM13_chrY_T0001138;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001138:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11435815	11436296	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001138;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001138;transcript_name=CHM13_chrY_T0001138;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001138:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436346	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001138;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001138;transcript_name=CHM13_chrY_T0001138;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001138:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11383202	11436377	1000	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001139;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001139;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001139;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11383202	11384494	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001139;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001139;transcript_name=CHM13_chrY_T0001139;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001139:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11434102	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001139;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001139;transcript_name=CHM13_chrY_T0001139;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001139:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001139;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001139;transcript_name=CHM13_chrY_T0001139;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001139:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11435704	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001139;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001139;transcript_name=CHM13_chrY_T0001139;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001139:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11435705	11435814	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001139;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001139;transcript_name=CHM13_chrY_T0001139;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001139:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11435815	11436296	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001139;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001139;transcript_name=CHM13_chrY_T0001139;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001139:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436377	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001139;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001139;transcript_name=CHM13_chrY_T0001139;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001139:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11383202	11436310	1000	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001140;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001140;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001140;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11383202	11384494	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001140;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001140;transcript_name=CHM13_chrY_T0001140;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001140:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11434102	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001140;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001140;transcript_name=CHM13_chrY_T0001140;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001140:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001140;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001140;transcript_name=CHM13_chrY_T0001140;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001140:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436089	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001140;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001140;transcript_name=CHM13_chrY_T0001140;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001140:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436090	11436310	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001140;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001140;transcript_name=CHM13_chrY_T0001140;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001140:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11383202	11436383	1000	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001141;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001141;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001141;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11383202	11384494	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001141;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001141;transcript_name=CHM13_chrY_T0001141;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001141:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11434102	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001141;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001141;transcript_name=CHM13_chrY_T0001141;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001141:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001141;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001141;transcript_name=CHM13_chrY_T0001141;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001141:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436300	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001141;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001141;transcript_name=CHM13_chrY_T0001141;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001141:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436301	11436383	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001141;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001141;transcript_name=CHM13_chrY_T0001141;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001141:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11383740	11436339	1000	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001142;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001142;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001142;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11383740	11383896	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001142;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001142;transcript_name=CHM13_chrY_T0001142;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001142:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11383897	11384265	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001142;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001142;transcript_name=CHM13_chrY_T0001142;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001142:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11384266	11384494	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001142;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001142;transcript_name=CHM13_chrY_T0001142;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001142:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11431044	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001142;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001142;transcript_name=CHM13_chrY_T0001142;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001142:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11431045	11431104	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001142;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001142;transcript_name=CHM13_chrY_T0001142;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001142:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11431105	11434102	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001142;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001142;transcript_name=CHM13_chrY_T0001142;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001142:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001142;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001142;transcript_name=CHM13_chrY_T0001142;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001142:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001142;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001142;transcript_name=CHM13_chrY_T0001142;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001142:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436339	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001142;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001142;transcript_name=CHM13_chrY_T0001142;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001142:4;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11383740	11436383	1000	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001143;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001143;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001143;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11383740	11383896	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001143;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001143;transcript_name=CHM13_chrY_T0001143;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001143:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11383897	11384265	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001143;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001143;transcript_name=CHM13_chrY_T0001143;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001143:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11384266	11384319	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001143;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001143;transcript_name=CHM13_chrY_T0001143;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001143:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384320	11384432	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001143;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001143;transcript_name=CHM13_chrY_T0001143;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001143:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11384433	11384494	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001143;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001143;transcript_name=CHM13_chrY_T0001143;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001143:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11434102	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001143;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001143;transcript_name=CHM13_chrY_T0001143;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001143:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001143;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001143;transcript_name=CHM13_chrY_T0001143;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001143:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001143;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001143;transcript_name=CHM13_chrY_T0001143;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001143:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436383	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001143;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001143;transcript_name=CHM13_chrY_T0001143;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001143:4;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11384174	11436377	1000	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001144;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001144;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001144;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11384174	11384319	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001144;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001144;transcript_name=CHM13_chrY_T0001144;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001144:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384320	11384432	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001144;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001144;transcript_name=CHM13_chrY_T0001144;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001144:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11384433	11384494	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001144;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001144;transcript_name=CHM13_chrY_T0001144;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001144:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11434102	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001144;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001144;transcript_name=CHM13_chrY_T0001144;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001144:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001144;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001144;transcript_name=CHM13_chrY_T0001144;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001144:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001144;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001144;transcript_name=CHM13_chrY_T0001144;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001144:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436377	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001144;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001144;transcript_name=CHM13_chrY_T0001144;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001144:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11384174	11436356	1000	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001145;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001145;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001145;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11384174	11384494	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001145;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001145;transcript_name=CHM13_chrY_T0001145;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001145:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11431044	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001145;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001145;transcript_name=CHM13_chrY_T0001145;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001145:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11431045	11431104	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001145;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001145;transcript_name=CHM13_chrY_T0001145;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001145:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11431105	11434102	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001145;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001145;transcript_name=CHM13_chrY_T0001145;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001145:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001145;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001145;transcript_name=CHM13_chrY_T0001145;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001145:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001145;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001145;transcript_name=CHM13_chrY_T0001145;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001145:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436356	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001145;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001145;transcript_name=CHM13_chrY_T0001145;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001145:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11384174	11435851	1000	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001146;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001146;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001146;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11384174	11384494	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001146;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001146;transcript_name=CHM13_chrY_T0001146;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001146:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11434102	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001146;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001146;transcript_name=CHM13_chrY_T0001146;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001146:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001146;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001146;transcript_name=CHM13_chrY_T0001146;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001146:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11435704	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001146;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001146;transcript_name=CHM13_chrY_T0001146;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001146:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11435705	11435851	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001146;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001146;transcript_name=CHM13_chrY_T0001146;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001146:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11384211	11436364	1000	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001147;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001147;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001147;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11384211	11384494	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001147;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001147;transcript_name=CHM13_chrY_T0001147;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001147:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11434102	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001147;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001147;transcript_name=CHM13_chrY_T0001147;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001147:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001147;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001147;transcript_name=CHM13_chrY_T0001147;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001147:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11435573	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001147;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001147;transcript_name=CHM13_chrY_T0001147;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001147:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11435574	11435593	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001147;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001147;transcript_name=CHM13_chrY_T0001147;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001147:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11435594	11436296	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001147;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001147;transcript_name=CHM13_chrY_T0001147;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001147:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436364	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001147;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001147;transcript_name=CHM13_chrY_T0001147;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001147:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11384211	11436342	1000	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001148;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001148;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001148;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11384211	11384494	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001148;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001148;transcript_name=CHM13_chrY_T0001148;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001148:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11434102	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001148;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001148;transcript_name=CHM13_chrY_T0001148;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001148:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001148;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001148;transcript_name=CHM13_chrY_T0001148;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001148:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11435573	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001148;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001148;transcript_name=CHM13_chrY_T0001148;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001148:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11435574	11435814	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001148;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001148;transcript_name=CHM13_chrY_T0001148;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001148:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11435815	11436296	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001148;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001148;transcript_name=CHM13_chrY_T0001148;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001148:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436342	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001148;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001148;transcript_name=CHM13_chrY_T0001148;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001148:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11384211	11436377	1000	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001149;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001149;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001149;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11384211	11384494	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001149;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001149;transcript_name=CHM13_chrY_T0001149;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001149:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11384495	11400186	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001149;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001149;transcript_name=CHM13_chrY_T0001149;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001149:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11400187	11400389	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001149;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001149;transcript_name=CHM13_chrY_T0001149;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001149:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11400390	11434102	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001149;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001149;transcript_name=CHM13_chrY_T0001149;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001149:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001149;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001149;transcript_name=CHM13_chrY_T0001149;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001149:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001149;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001149;transcript_name=CHM13_chrY_T0001149;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001149:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436377	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001149;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001149;transcript_name=CHM13_chrY_T0001149;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001149:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11387308	11436386	1000	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001150;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001150;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001150;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11387308	11388574	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001150;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001150;transcript_name=CHM13_chrY_T0001150;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001150:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11388575	11434102	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001150;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001150;transcript_name=CHM13_chrY_T0001150;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001150:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001150;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001150;transcript_name=CHM13_chrY_T0001150;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001150:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001150;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001150;transcript_name=CHM13_chrY_T0001150;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001150:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436386	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001150;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001150;transcript_name=CHM13_chrY_T0001150;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001150:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11388331	11435814	1000	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001151;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001151;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001151;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11388331	11388574	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001151;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001151;transcript_name=CHM13_chrY_T0001151;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001151:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11388575	11434102	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001151;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001151;transcript_name=CHM13_chrY_T0001151;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001151:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001151;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001151;transcript_name=CHM13_chrY_T0001151;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001151:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11435704	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001151;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001151;transcript_name=CHM13_chrY_T0001151;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001151:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11435705	11435814	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001151;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001151;transcript_name=CHM13_chrY_T0001151;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001151:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11388333	11435814	1000	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001152;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001152;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001152;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11388333	11388574	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001152;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001152;transcript_name=CHM13_chrY_T0001152;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001152:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11388575	11431044	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001152;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001152;transcript_name=CHM13_chrY_T0001152;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001152:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11431045	11431104	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001152;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001152;transcript_name=CHM13_chrY_T0001152;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001152:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11431105	11434102	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001152;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001152;transcript_name=CHM13_chrY_T0001152;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001152:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001152;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001152;transcript_name=CHM13_chrY_T0001152;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001152:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11435704	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001152;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001152;transcript_name=CHM13_chrY_T0001152;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001152:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11435705	11435814	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001152;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001152;transcript_name=CHM13_chrY_T0001152;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001152:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11388662	11436337	1000	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001153;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001153;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001153;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11388662	11389001	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001153;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001153;transcript_name=CHM13_chrY_T0001153;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001153:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11389002	11434102	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001153;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001153;transcript_name=CHM13_chrY_T0001153;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001153:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001153;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001153;transcript_name=CHM13_chrY_T0001153;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001153:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001153;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001153;transcript_name=CHM13_chrY_T0001153;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001153:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436337	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001153;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001153;transcript_name=CHM13_chrY_T0001153;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001153:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11390934	11436382	1000	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001154;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001154;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001154;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11390934	11391738	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001154;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001154;transcript_name=CHM13_chrY_T0001154;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001154:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11391739	11434102	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001154;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001154;transcript_name=CHM13_chrY_T0001154;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001154:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001154;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001154;transcript_name=CHM13_chrY_T0001154;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001154:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001154;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001154;transcript_name=CHM13_chrY_T0001154;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001154:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436382	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001154;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001154;transcript_name=CHM13_chrY_T0001154;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001154:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11394506	11436383	1000	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001155;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001155;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001155;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11394506	11394732	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001155;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001155;transcript_name=CHM13_chrY_T0001155;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001155:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11394733	11434102	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001155;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001155;transcript_name=CHM13_chrY_T0001155;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001155:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001155;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001155;transcript_name=CHM13_chrY_T0001155;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001155:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001155;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001155;transcript_name=CHM13_chrY_T0001155;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001155:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436383	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001155;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001155;transcript_name=CHM13_chrY_T0001155;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001155:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11399911	11436364	1000	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001158;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001158;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001158;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11399911	11400389	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001158;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001158;transcript_name=CHM13_chrY_T0001158;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001158:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11400390	11434102	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001158;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001158;transcript_name=CHM13_chrY_T0001158;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001158:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001158;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001158;transcript_name=CHM13_chrY_T0001158;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001158:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001158;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001158;transcript_name=CHM13_chrY_T0001158;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001158:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436364	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001158;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001158;transcript_name=CHM13_chrY_T0001158;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001158:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11424685	11436382	1000	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001159;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001159;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001159;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11424685	11424885	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001159;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001159;transcript_name=CHM13_chrY_T0001159;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001159:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11424886	11431044	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001159;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001159;transcript_name=CHM13_chrY_T0001159;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001159:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11431045	11431104	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001159;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001159;transcript_name=CHM13_chrY_T0001159;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001159:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11431105	11434102	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001159;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001159;transcript_name=CHM13_chrY_T0001159;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001159:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001159;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001159;transcript_name=CHM13_chrY_T0001159;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001159:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001159;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001159;transcript_name=CHM13_chrY_T0001159;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001159:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436382	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001159;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001159;transcript_name=CHM13_chrY_T0001159;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001159:3;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11427761	11436382	1000	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001160;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001160;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001160;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11427761	11428040	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001160;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001160;transcript_name=CHM13_chrY_T0001160;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001160:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11428041	11434102	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001160;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001160;transcript_name=CHM13_chrY_T0001160;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001160:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001160;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001160;transcript_name=CHM13_chrY_T0001160;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001160:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001160;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001160;transcript_name=CHM13_chrY_T0001160;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001160:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436382	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001160;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001160;transcript_name=CHM13_chrY_T0001160;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001160:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11430896	11436377	1000	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001161;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001161;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001161;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11430896	11431104	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001161;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001161;transcript_name=CHM13_chrY_T0001161;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001161:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11431105	11434102	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001161;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001161;transcript_name=CHM13_chrY_T0001161;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001161:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11434103	11434161	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001161;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001161;transcript_name=CHM13_chrY_T0001161;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001161:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001161;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001161;transcript_name=CHM13_chrY_T0001161;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001161:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436377	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001161;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001161;transcript_name=CHM13_chrY_T0001161;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001161:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11432991	11436337	1000	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001162;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001162;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001162;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11432991	11434161	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001162;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001162;transcript_name=CHM13_chrY_T0001162;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001162:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11435704	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001162;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001162;transcript_name=CHM13_chrY_T0001162;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001162:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11435705	11435814	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001162;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001162;transcript_name=CHM13_chrY_T0001162;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001162:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11435815	11436296	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001162;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001162;transcript_name=CHM13_chrY_T0001162;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001162:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436337	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001162;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001162;transcript_name=CHM13_chrY_T0001162;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001162:2;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11432991	11436382	1000	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001163;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001163;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001163;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11432991	11434161	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001163;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001163;transcript_name=CHM13_chrY_T0001163;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001163:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11436296	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001163;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001163;transcript_name=CHM13_chrY_T0001163;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001163:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11436297	11436382	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001163;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001163;transcript_name=CHM13_chrY_T0001163;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001163:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	11434126	11436310	1000	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001164;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_G0000372;transcript_name=CHM13_chrY_T0001164;gene_name=ENSG00000291032;ID=CHM13_chrY_T0001164;Name=ENSG00000291032
CHM13_chrY	CAT	exon	11434126	11434161	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001164;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001164;transcript_name=CHM13_chrY_T0001164;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001164:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11434162	11435435	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001164;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001164;transcript_name=CHM13_chrY_T0001164;gene_name=ENSG00000291032;ID=intron:CHM13_chrY_T0001164:0;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11435436	11436310	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=CHM13_chrY_T0001164;gene_id=CHM13_chrY_G0000372;Parent=CHM13_chrY_T0001164;transcript_name=CHM13_chrY_T0001164;gene_name=ENSG00000291032;ID=exon:CHM13_chrY_T0001164:1;Name=ENSG00000291032;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11365606	11365848	.	+	.	source_gene_common_name=ENSG00000274231;source_gene=ENSG00000274231.1;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;gene_id=CHM13_chrY_G0000373;gene_biotype=processed_pseudogene;gene_name=ENSG00000274231;gene_sources=liftoff;ID=CHM13_chrY_G0000373;Name=ENSG00000274231
CHM13_chrY	CAT	transcript	11365606	11365848	1000	+	.	source_transcript=ENST00000619901.1;source_transcript_name=ENST00000619901;source_gene=ENSG00000274231.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274231.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619901.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274231;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;transcript_id=CHM13_chrY_T0001123;gene_id=CHM13_chrY_G0000373;Parent=CHM13_chrY_G0000373;transcript_name=CHM13_chrY_T0001123;gene_name=ENSG00000274231;ID=CHM13_chrY_T0001123;Name=ENSG00000274231
CHM13_chrY	CAT	exon	11365606	11365848	.	+	.	source_transcript=ENST00000619901.1;source_transcript_name=ENST00000619901;source_gene=ENSG00000274231.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274231.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619901.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274231;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;transcript_id=CHM13_chrY_T0001123;gene_id=CHM13_chrY_G0000373;Parent=CHM13_chrY_T0001123;transcript_name=CHM13_chrY_T0001123;gene_name=ENSG00000274231;ID=exon:CHM13_chrY_T0001123:0;Name=ENSG00000274231;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11375215	11380370	.	-	.	source_gene_common_name=ENSG00000278212;source_gene=ENSG00000278212.5;gene_id=CHM13_chrY_G0000374;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000278212;gene_sources=liftoff;ID=CHM13_chrY_G0000374;Name=ENSG00000278212
CHM13_chrY	CAT	transcript	11375215	11380370	1000	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=CHM13_chrY_T0001131;gene_id=CHM13_chrY_G0000374;Parent=CHM13_chrY_G0000374;transcript_name=CHM13_chrY_T0001131;gene_name=ENSG00000278212;ID=CHM13_chrY_T0001131;Name=ENSG00000278212
CHM13_chrY	CAT	exon	11375215	11375427	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=CHM13_chrY_T0001131;gene_id=CHM13_chrY_G0000374;Parent=CHM13_chrY_T0001131;transcript_name=CHM13_chrY_T0001131;gene_name=ENSG00000278212;ID=exon:CHM13_chrY_T0001131:0;Name=ENSG00000278212;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11375428	11376242	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=CHM13_chrY_T0001131;gene_id=CHM13_chrY_G0000374;Parent=CHM13_chrY_T0001131;transcript_name=CHM13_chrY_T0001131;gene_name=ENSG00000278212;ID=intron:CHM13_chrY_T0001131:0;Name=ENSG00000278212;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11376243	11376397	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=CHM13_chrY_T0001131;gene_id=CHM13_chrY_G0000374;Parent=CHM13_chrY_T0001131;transcript_name=CHM13_chrY_T0001131;gene_name=ENSG00000278212;ID=exon:CHM13_chrY_T0001131:1;Name=ENSG00000278212;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11376398	11377010	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=CHM13_chrY_T0001131;gene_id=CHM13_chrY_G0000374;Parent=CHM13_chrY_T0001131;transcript_name=CHM13_chrY_T0001131;gene_name=ENSG00000278212;ID=intron:CHM13_chrY_T0001131:1;Name=ENSG00000278212;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11377011	11377241	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=CHM13_chrY_T0001131;gene_id=CHM13_chrY_G0000374;Parent=CHM13_chrY_T0001131;transcript_name=CHM13_chrY_T0001131;gene_name=ENSG00000278212;ID=exon:CHM13_chrY_T0001131:2;Name=ENSG00000278212;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11377242	11377924	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=CHM13_chrY_T0001131;gene_id=CHM13_chrY_G0000374;Parent=CHM13_chrY_T0001131;transcript_name=CHM13_chrY_T0001131;gene_name=ENSG00000278212;ID=intron:CHM13_chrY_T0001131:2;Name=ENSG00000278212;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11377925	11378045	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=CHM13_chrY_T0001131;gene_id=CHM13_chrY_G0000374;Parent=CHM13_chrY_T0001131;transcript_name=CHM13_chrY_T0001131;gene_name=ENSG00000278212;ID=exon:CHM13_chrY_T0001131:3;Name=ENSG00000278212;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11378046	11378409	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=CHM13_chrY_T0001131;gene_id=CHM13_chrY_G0000374;Parent=CHM13_chrY_T0001131;transcript_name=CHM13_chrY_T0001131;gene_name=ENSG00000278212;ID=intron:CHM13_chrY_T0001131:3;Name=ENSG00000278212;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11378410	11378480	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=CHM13_chrY_T0001131;gene_id=CHM13_chrY_G0000374;Parent=CHM13_chrY_T0001131;transcript_name=CHM13_chrY_T0001131;gene_name=ENSG00000278212;ID=exon:CHM13_chrY_T0001131:4;Name=ENSG00000278212;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11378481	11379893	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=CHM13_chrY_T0001131;gene_id=CHM13_chrY_G0000374;Parent=CHM13_chrY_T0001131;transcript_name=CHM13_chrY_T0001131;gene_name=ENSG00000278212;ID=intron:CHM13_chrY_T0001131:4;Name=ENSG00000278212;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11379894	11380370	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=CHM13_chrY_T0001131;gene_id=CHM13_chrY_G0000374;Parent=CHM13_chrY_T0001131;transcript_name=CHM13_chrY_T0001131;gene_name=ENSG00000278212;ID=exon:CHM13_chrY_T0001131:5;Name=ENSG00000278212;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11394973	11395176	.	+	.	source_gene_common_name=ANKRD20A6P;source_gene=ENSG00000274502.1;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;gene_id=CHM13_chrY_G0000375;gene_biotype=processed_pseudogene;gene_name=ANKRD20A6P;gene_sources=liftoff;ID=CHM13_chrY_G0000375;Name=ANKRD20A6P
CHM13_chrY	CAT	transcript	11394973	11395176	1000	+	.	source_transcript=ENST00000618763.1;source_transcript_name=ANKRD20A6P-201;source_gene=ENSG00000274502.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274502.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618763.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD20A6P;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;transcript_id=CHM13_chrY_T0001156;gene_id=CHM13_chrY_G0000375;Parent=CHM13_chrY_G0000375;transcript_name=CHM13_chrY_T0001156;gene_name=ANKRD20A6P;ID=CHM13_chrY_T0001156;Name=ANKRD20A6P
CHM13_chrY	CAT	exon	11394973	11395176	.	+	.	source_transcript=ENST00000618763.1;source_transcript_name=ANKRD20A6P-201;source_gene=ENSG00000274502.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274502.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618763.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD20A6P;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;transcript_id=CHM13_chrY_T0001156;gene_id=CHM13_chrY_G0000375;Parent=CHM13_chrY_T0001156;transcript_name=CHM13_chrY_T0001156;gene_name=ANKRD20A6P;ID=exon:CHM13_chrY_T0001156:0;Name=ANKRD20A6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11399665	11400175	.	+	.	source_gene_common_name=SNX18P1Y;source_gene=ENSG00000274162.1;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;gene_id=CHM13_chrY_G0000376;gene_biotype=processed_pseudogene;gene_name=SNX18P1Y;gene_sources=liftoff;ID=CHM13_chrY_G0000376;Name=SNX18P1Y
CHM13_chrY	CAT	transcript	11399665	11400175	1000	+	.	source_transcript=ENST00000616231.1;source_transcript_name=SNX18P1Y-201;source_gene=ENSG00000274162.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274162.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616231.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616231.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX18P1Y;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;transcript_id=CHM13_chrY_T0001157;gene_id=CHM13_chrY_G0000376;Parent=CHM13_chrY_G0000376;transcript_name=CHM13_chrY_T0001157;gene_name=SNX18P1Y;ID=CHM13_chrY_T0001157;Name=SNX18P1Y
CHM13_chrY	CAT	exon	11399665	11400175	.	+	.	source_transcript=ENST00000616231.1;source_transcript_name=SNX18P1Y-201;source_gene=ENSG00000274162.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274162.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616231.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616231.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX18P1Y;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;transcript_id=CHM13_chrY_T0001157;gene_id=CHM13_chrY_G0000376;Parent=CHM13_chrY_T0001157;transcript_name=CHM13_chrY_T0001157;gene_name=SNX18P1Y;ID=exon:CHM13_chrY_T0001157:0;Name=SNX18P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11528266	11529529	.	+	.	source_gene_common_name=DUX4L16;source_gene=ENSG00000258567.1;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;gene_id=CHM13_chrY_G0000377;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L16;gene_sources=liftoff;ID=CHM13_chrY_G0000377;Name=DUX4L16
CHM13_chrY	CAT	transcript	11528266	11529529	1000	+	.	source_transcript=ENST00000555130.1;source_transcript_name=DUX4L16-201;source_gene=ENSG00000258567.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258567.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000555130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000555130.1;transcript_score=199.921;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L16;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;transcript_id=CHM13_chrY_T0001165;gene_id=CHM13_chrY_G0000377;Parent=CHM13_chrY_G0000377;transcript_name=CHM13_chrY_T0001165;gene_name=DUX4L16;ID=CHM13_chrY_T0001165;Name=DUX4L16
CHM13_chrY	CAT	exon	11528266	11529529	.	+	.	source_transcript=ENST00000555130.1;source_transcript_name=DUX4L16-201;source_gene=ENSG00000258567.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258567.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000555130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000555130.1;transcript_score=199.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L16;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;transcript_id=CHM13_chrY_T0001165;gene_id=CHM13_chrY_G0000377;Parent=CHM13_chrY_T0001165;transcript_name=CHM13_chrY_T0001165;gene_name=DUX4L16;ID=exon:CHM13_chrY_T0001165:0;Name=DUX4L16;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11536269	11537535	.	+	.	source_gene_common_name=DUX4L17;source_gene=ENSG00000259154.1;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;gene_id=CHM13_chrY_G0000378;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L17;gene_sources=liftoff;ID=CHM13_chrY_G0000378;Name=DUX4L17
CHM13_chrY	CAT	transcript	11536269	11537535	1000	+	.	source_transcript=ENST00000557360.1;source_transcript_name=DUX4L17-201;source_gene=ENSG00000259154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557360.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L17;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;transcript_id=CHM13_chrY_T0001166;gene_id=CHM13_chrY_G0000378;Parent=CHM13_chrY_G0000378;transcript_name=CHM13_chrY_T0001166;gene_name=DUX4L17;ID=CHM13_chrY_T0001166;Name=DUX4L17
CHM13_chrY	CAT	exon	11536269	11537535	.	+	.	source_transcript=ENST00000557360.1;source_transcript_name=DUX4L17-201;source_gene=ENSG00000259154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L17;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;transcript_id=CHM13_chrY_T0001166;gene_id=CHM13_chrY_G0000378;Parent=CHM13_chrY_T0001166;transcript_name=CHM13_chrY_T0001166;gene_name=DUX4L17;ID=exon:CHM13_chrY_T0001166:0;Name=DUX4L17;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11542905	11544171	.	+	.	source_gene_common_name=DUX4L18;source_gene=ENSG00000259029.1;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;gene_id=CHM13_chrY_G0000379;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L18;gene_sources=liftoff;ID=CHM13_chrY_G0000379;Name=DUX4L18
CHM13_chrY	CAT	transcript	11542905	11544171	1000	+	.	source_transcript=ENST00000553347.1;source_transcript_name=DUX4L18-201;source_gene=ENSG00000259029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000553347.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000553347.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L18;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;transcript_id=CHM13_chrY_T0001167;gene_id=CHM13_chrY_G0000379;Parent=CHM13_chrY_G0000379;transcript_name=CHM13_chrY_T0001167;gene_name=DUX4L18;ID=CHM13_chrY_T0001167;Name=DUX4L18
CHM13_chrY	CAT	exon	11542905	11544171	.	+	.	source_transcript=ENST00000553347.1;source_transcript_name=DUX4L18-201;source_gene=ENSG00000259029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000553347.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000553347.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L18;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;transcript_id=CHM13_chrY_T0001167;gene_id=CHM13_chrY_G0000379;Parent=CHM13_chrY_T0001167;transcript_name=CHM13_chrY_T0001167;gene_name=DUX4L18;ID=exon:CHM13_chrY_T0001167:0;Name=DUX4L18;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11553679	11554945	.	+	.	source_gene_common_name=DUX4L19;source_gene=ENSG00000258991.1;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;gene_id=CHM13_chrY_G0000380;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L19;gene_sources=liftoff;ID=CHM13_chrY_G0000380;Name=DUX4L19
CHM13_chrY	CAT	transcript	11553679	11554945	1000	+	.	source_transcript=ENST00000557448.1;source_transcript_name=DUX4L19-201;source_gene=ENSG00000258991.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258991.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557448.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557448.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L19;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;transcript_id=CHM13_chrY_T0001168;gene_id=CHM13_chrY_G0000380;Parent=CHM13_chrY_G0000380;transcript_name=CHM13_chrY_T0001168;gene_name=DUX4L19;ID=CHM13_chrY_T0001168;Name=DUX4L19
CHM13_chrY	CAT	exon	11553679	11554945	.	+	.	source_transcript=ENST00000557448.1;source_transcript_name=DUX4L19-201;source_gene=ENSG00000258991.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258991.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557448.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557448.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L19;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;transcript_id=CHM13_chrY_T0001168;gene_id=CHM13_chrY_G0000380;Parent=CHM13_chrY_T0001168;transcript_name=CHM13_chrY_T0001168;gene_name=DUX4L19;ID=exon:CHM13_chrY_T0001168:0;Name=DUX4L19;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11556977	11559043	.	+	.	source_gene_common_name=PABPC1P5;source_gene=ENSG00000270455.1;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;gene_id=CHM13_chrY_G0000381;gene_biotype=processed_pseudogene;gene_name=PABPC1P5;gene_sources=liftoff;ID=CHM13_chrY_G0000381;Name=PABPC1P5
CHM13_chrY	CAT	transcript	11556977	11559043	1000	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=CHM13_chrY_T0001169;gene_id=CHM13_chrY_G0000381;Parent=CHM13_chrY_G0000381;transcript_name=CHM13_chrY_T0001169;gene_name=PABPC1P5;ID=CHM13_chrY_T0001169;Name=PABPC1P5
CHM13_chrY	CAT	exon	11556977	11557145	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=CHM13_chrY_T0001169;gene_id=CHM13_chrY_G0000381;Parent=CHM13_chrY_T0001169;transcript_name=CHM13_chrY_T0001169;gene_name=PABPC1P5;ID=exon:CHM13_chrY_T0001169:0;Name=PABPC1P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11557146	11557536	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=CHM13_chrY_T0001169;gene_id=CHM13_chrY_G0000381;Parent=CHM13_chrY_T0001169;transcript_name=CHM13_chrY_T0001169;gene_name=PABPC1P5;ID=intron:CHM13_chrY_T0001169:0;Name=PABPC1P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11557537	11559043	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=CHM13_chrY_T0001169;gene_id=CHM13_chrY_G0000381;Parent=CHM13_chrY_T0001169;transcript_name=CHM13_chrY_T0001169;gene_name=PABPC1P5;ID=exon:CHM13_chrY_T0001169:1;Name=PABPC1P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11561929	11607023	.	-	.	source_gene_common_name=SLC9B1P1;source_gene=ENSG00000183704.7;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;gene_id=CHM13_chrY_G0000382;gene_biotype=unprocessed_pseudogene;gene_name=SLC9B1P1;gene_sources=liftoff;ID=CHM13_chrY_G0000382;Name=SLC9B1P1
CHM13_chrY	CAT	transcript	11561929	11607023	1000	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_G0000382;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=CHM13_chrY_T0001170;Name=SLC9B1P1
CHM13_chrY	CAT	exon	11561929	11562144	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:CHM13_chrY_T0001170:0;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11562145	11566317	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:CHM13_chrY_T0001170:0;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11566318	11566454	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:CHM13_chrY_T0001170:1;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11566455	11567341	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:CHM13_chrY_T0001170:1;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11567342	11567450	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:CHM13_chrY_T0001170:2;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11567451	11571234	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:CHM13_chrY_T0001170:2;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11571235	11571384	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:CHM13_chrY_T0001170:3;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11571385	11572226	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:CHM13_chrY_T0001170:3;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11572227	11572333	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:CHM13_chrY_T0001170:4;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11572334	11590216	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:CHM13_chrY_T0001170:4;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11590217	11590392	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:CHM13_chrY_T0001170:5;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11590393	11602963	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:CHM13_chrY_T0001170:5;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11602964	11603091	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:CHM13_chrY_T0001170:6;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11603092	11604205	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:CHM13_chrY_T0001170:6;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11604206	11604348	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:CHM13_chrY_T0001170:7;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11604349	11606852	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=intron:CHM13_chrY_T0001170:7;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11606853	11607023	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=CHM13_chrY_T0001170;gene_id=CHM13_chrY_G0000382;Parent=CHM13_chrY_T0001170;transcript_name=CHM13_chrY_T0001170;gene_name=SLC9B1P1;ID=exon:CHM13_chrY_T0001170:8;Name=SLC9B1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11617039	11618416	.	+	.	source_gene_common_name=ACTR3BP1;source_gene=ENSG00000270242.1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;gene_id=CHM13_chrY_G0000383;gene_biotype=processed_pseudogene;gene_name=ACTR3BP1;gene_sources=liftoff;ID=CHM13_chrY_G0000383;Name=ACTR3BP1
CHM13_chrY	CAT	transcript	11617039	11618416	1000	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=CHM13_chrY_T0001171;gene_id=CHM13_chrY_G0000383;Parent=CHM13_chrY_G0000383;transcript_name=CHM13_chrY_T0001171;gene_name=ACTR3BP1;ID=CHM13_chrY_T0001171;Name=ACTR3BP1
CHM13_chrY	CAT	exon	11617039	11617079	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=CHM13_chrY_T0001171;gene_id=CHM13_chrY_G0000383;Parent=CHM13_chrY_T0001171;transcript_name=CHM13_chrY_T0001171;gene_name=ACTR3BP1;ID=exon:CHM13_chrY_T0001171:0;Name=ACTR3BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11617080	11617210	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=CHM13_chrY_T0001171;gene_id=CHM13_chrY_G0000383;Parent=CHM13_chrY_T0001171;transcript_name=CHM13_chrY_T0001171;gene_name=ACTR3BP1;ID=intron:CHM13_chrY_T0001171:0;Name=ACTR3BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11617211	11618416	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=CHM13_chrY_T0001171;gene_id=CHM13_chrY_G0000383;Parent=CHM13_chrY_T0001171;transcript_name=CHM13_chrY_T0001171;gene_name=ACTR3BP1;ID=exon:CHM13_chrY_T0001171:1;Name=ACTR3BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11633895	11640063	.	+	.	source_gene_common_name=CHEK2P1;source_gene=ENSG00000275828.1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;gene_id=CHM13_chrY_G0000384;gene_biotype=unprocessed_pseudogene;gene_name=CHEK2P1;gene_sources=liftoff;ID=CHM13_chrY_G0000384;Name=CHEK2P1
CHM13_chrY	CAT	transcript	11633895	11640063	1000	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=CHM13_chrY_T0001172;gene_id=CHM13_chrY_G0000384;Parent=CHM13_chrY_G0000384;transcript_name=CHM13_chrY_T0001172;gene_name=CHEK2P1;ID=CHM13_chrY_T0001172;Name=CHEK2P1
CHM13_chrY	CAT	exon	11633895	11633980	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=CHM13_chrY_T0001172;gene_id=CHM13_chrY_G0000384;Parent=CHM13_chrY_T0001172;transcript_name=CHM13_chrY_T0001172;gene_name=CHEK2P1;ID=exon:CHM13_chrY_T0001172:0;Name=CHEK2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11633981	11638743	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=CHM13_chrY_T0001172;gene_id=CHM13_chrY_G0000384;Parent=CHM13_chrY_T0001172;transcript_name=CHM13_chrY_T0001172;gene_name=CHEK2P1;ID=intron:CHM13_chrY_T0001172:0;Name=CHEK2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11638744	11638824	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=CHM13_chrY_T0001172;gene_id=CHM13_chrY_G0000384;Parent=CHM13_chrY_T0001172;transcript_name=CHM13_chrY_T0001172;gene_name=CHEK2P1;ID=exon:CHM13_chrY_T0001172:1;Name=CHEK2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11638825	11639976	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=CHM13_chrY_T0001172;gene_id=CHM13_chrY_G0000384;Parent=CHM13_chrY_T0001172;transcript_name=CHM13_chrY_T0001172;gene_name=CHEK2P1;ID=intron:CHM13_chrY_T0001172:1;Name=CHEK2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11639977	11640063	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=CHM13_chrY_T0001172;gene_id=CHM13_chrY_G0000384;Parent=CHM13_chrY_T0001172;transcript_name=CHM13_chrY_T0001172;gene_name=CHEK2P1;ID=exon:CHM13_chrY_T0001172:2;Name=CHEK2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11666765	11666911	.	-	.	source_gene_common_name=MTND1P12;source_gene=ENSG00000225433.3;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;gene_id=CHM13_chrY_G0000385;gene_biotype=unprocessed_pseudogene;gene_name=MTND1P12;gene_sources=liftoff;ID=CHM13_chrY_G0000385;Name=MTND1P12
CHM13_chrY	CAT	transcript	11666765	11666911	1000	-	.	source_transcript=ENST00000455231.3;source_transcript_name=MTND1P12-201;source_gene=ENSG00000225433.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225433.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455231.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000455231.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P12;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;transcript_id=CHM13_chrY_T0001173;gene_id=CHM13_chrY_G0000385;Parent=CHM13_chrY_G0000385;transcript_name=CHM13_chrY_T0001173;gene_name=MTND1P12;ID=CHM13_chrY_T0001173;Name=MTND1P12
CHM13_chrY	CAT	exon	11666765	11666911	.	-	.	source_transcript=ENST00000455231.3;source_transcript_name=MTND1P12-201;source_gene=ENSG00000225433.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225433.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455231.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000455231.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P12;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;transcript_id=CHM13_chrY_T0001173;gene_id=CHM13_chrY_G0000385;Parent=CHM13_chrY_T0001173;transcript_name=CHM13_chrY_T0001173;gene_name=MTND1P12;ID=exon:CHM13_chrY_T0001173:0;Name=MTND1P12;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11667055	11667448	.	-	.	source_gene_common_name=ENSG00000224567;source_gene=ENSG00000224567.2;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;gene_id=CHM13_chrY_G0000386;gene_biotype=processed_pseudogene;gene_name=ENSG00000224567;gene_sources=liftoff;ID=CHM13_chrY_G0000386;Name=ENSG00000224567
CHM13_chrY	CAT	transcript	11667055	11667448	1000	-	.	source_transcript=ENST00000426062.2;source_transcript_name=ENST00000426062;source_gene=ENSG00000224567.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224567.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000426062.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426062.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224567;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;transcript_id=CHM13_chrY_T0001174;gene_id=CHM13_chrY_G0000386;Parent=CHM13_chrY_G0000386;transcript_name=CHM13_chrY_T0001174;gene_name=ENSG00000224567;ID=CHM13_chrY_T0001174;Name=ENSG00000224567
CHM13_chrY	CAT	exon	11667055	11667448	.	-	.	source_transcript=ENST00000426062.2;source_transcript_name=ENST00000426062;source_gene=ENSG00000224567.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224567.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000426062.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426062.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224567;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;transcript_id=CHM13_chrY_T0001174;gene_id=CHM13_chrY_G0000386;Parent=CHM13_chrY_T0001174;transcript_name=CHM13_chrY_T0001174;gene_name=ENSG00000224567;ID=exon:CHM13_chrY_T0001174:0;Name=ENSG00000224567;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	11695076	11695586	.	-	.	source_gene_common_name=ENSG00000271375;source_gene=ENSG00000271375.1;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;gene_id=CHM13_chrY_G0000387;gene_biotype=processed_pseudogene;gene_name=ENSG00000271375;gene_sources=liftoff;ID=CHM13_chrY_G0000387;Name=ENSG00000271375
CHM13_chrY	CAT	transcript	11695076	11695586	1000	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=299.743;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=CHM13_chrY_T0001175;gene_id=CHM13_chrY_G0000387;Parent=CHM13_chrY_G0000387;transcript_name=CHM13_chrY_T0001175;gene_name=ENSG00000271375;ID=CHM13_chrY_T0001175;Name=ENSG00000271375
CHM13_chrY	CAT	exon	11695076	11695406	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=CHM13_chrY_T0001175;gene_id=CHM13_chrY_G0000387;Parent=CHM13_chrY_T0001175;transcript_name=CHM13_chrY_T0001175;gene_name=ENSG00000271375;ID=exon:CHM13_chrY_T0001175:0;Name=ENSG00000271375;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	11695407	11695528	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=CHM13_chrY_T0001175;gene_id=CHM13_chrY_G0000387;Parent=CHM13_chrY_T0001175;transcript_name=CHM13_chrY_T0001175;gene_name=ENSG00000271375;ID=intron:CHM13_chrY_T0001175:0;Name=ENSG00000271375;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	11695529	11695586	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=299.743;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=CHM13_chrY_T0001175;gene_id=CHM13_chrY_G0000387;Parent=CHM13_chrY_T0001175;transcript_name=CHM13_chrY_T0001175;gene_name=ENSG00000271375;ID=exon:CHM13_chrY_T0001175:1;Name=ENSG00000271375;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	12687995	12689469	.	-	.	source_gene_common_name=RCC2P1;source_gene=ENSG00000234385.1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;gene_id=CHM13_chrY_G0000388;gene_biotype=processed_pseudogene;gene_name=RCC2P1;gene_sources=liftoff;ID=CHM13_chrY_G0000388;Name=RCC2P1
CHM13_chrY	CAT	transcript	12687995	12689469	1000	-	.	source_transcript=ENST00000452257.1;source_transcript_name=RCC2P1-201;source_gene=ENSG00000234385.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234385.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452257.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452257.1;transcript_score=199.864;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;transcript_id=CHM13_chrY_T0001176;gene_id=CHM13_chrY_G0000388;Parent=CHM13_chrY_G0000388;transcript_name=CHM13_chrY_T0001176;gene_name=RCC2P1;ID=CHM13_chrY_T0001176;Name=RCC2P1
CHM13_chrY	CAT	exon	12687995	12689469	.	-	.	source_transcript=ENST00000452257.1;source_transcript_name=RCC2P1-201;source_gene=ENSG00000234385.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234385.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452257.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452257.1;transcript_score=199.864;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;transcript_id=CHM13_chrY_T0001176;gene_id=CHM13_chrY_G0000388;Parent=CHM13_chrY_T0001176;transcript_name=CHM13_chrY_T0001176;gene_name=RCC2P1;ID=exon:CHM13_chrY_T0001176:0;Name=RCC2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	12829431	12830664	.	-	.	source_gene_common_name=ASS1P6;source_gene=ENSG00000215583.3;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;gene_id=CHM13_chrY_G0000389;gene_biotype=processed_pseudogene;gene_name=ASS1P6;gene_sources=liftoff;ID=CHM13_chrY_G0000389;Name=ASS1P6
CHM13_chrY	CAT	transcript	12829431	12830664	1000	-	.	source_transcript=ENST00000421118.1;source_transcript_name=ASS1P6-201;source_gene=ENSG00000215583.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215583.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000421118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421118.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASS1P6;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;transcript_id=CHM13_chrY_T0001177;gene_id=CHM13_chrY_G0000389;Parent=CHM13_chrY_G0000389;transcript_name=CHM13_chrY_T0001177;gene_name=ASS1P6;ID=CHM13_chrY_T0001177;Name=ASS1P6
CHM13_chrY	CAT	exon	12829431	12830664	.	-	.	source_transcript=ENST00000421118.1;source_transcript_name=ASS1P6-201;source_gene=ENSG00000215583.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215583.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000421118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421118.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASS1P6;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;transcript_id=CHM13_chrY_T0001177;gene_id=CHM13_chrY_G0000389;Parent=CHM13_chrY_T0001177;transcript_name=CHM13_chrY_T0001177;gene_name=ASS1P6;ID=exon:CHM13_chrY_T0001177:0;Name=ASS1P6;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	12864104	12894323	.	+	.	source_gene_common_name=MXRA5Y;source_gene=ENSG00000235649.2;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;gene_id=CHM13_chrY_G0000390;gene_biotype=unprocessed_pseudogene;gene_name=MXRA5Y;gene_sources=liftoff;ID=CHM13_chrY_G0000390;Name=MXRA5Y
CHM13_chrY	CAT	transcript	12864104	12894323	1000	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=CHM13_chrY_T0001178;gene_id=CHM13_chrY_G0000390;Parent=CHM13_chrY_G0000390;transcript_name=CHM13_chrY_T0001178;gene_name=MXRA5Y;ID=CHM13_chrY_T0001178;Name=MXRA5Y
CHM13_chrY	CAT	exon	12864104	12864295	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=CHM13_chrY_T0001178;gene_id=CHM13_chrY_G0000390;Parent=CHM13_chrY_T0001178;transcript_name=CHM13_chrY_T0001178;gene_name=MXRA5Y;ID=exon:CHM13_chrY_T0001178:0;Name=MXRA5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	12864296	12874979	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=CHM13_chrY_T0001178;gene_id=CHM13_chrY_G0000390;Parent=CHM13_chrY_T0001178;transcript_name=CHM13_chrY_T0001178;gene_name=MXRA5Y;ID=intron:CHM13_chrY_T0001178:0;Name=MXRA5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	12874980	12879937	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=CHM13_chrY_T0001178;gene_id=CHM13_chrY_G0000390;Parent=CHM13_chrY_T0001178;transcript_name=CHM13_chrY_T0001178;gene_name=MXRA5Y;ID=exon:CHM13_chrY_T0001178:1;Name=MXRA5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	12879938	12885811	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=CHM13_chrY_T0001178;gene_id=CHM13_chrY_G0000390;Parent=CHM13_chrY_T0001178;transcript_name=CHM13_chrY_T0001178;gene_name=MXRA5Y;ID=intron:CHM13_chrY_T0001178:1;Name=MXRA5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	12885812	12886797	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=CHM13_chrY_T0001178;gene_id=CHM13_chrY_G0000390;Parent=CHM13_chrY_T0001178;transcript_name=CHM13_chrY_T0001178;gene_name=MXRA5Y;ID=exon:CHM13_chrY_T0001178:2;Name=MXRA5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	12886798	12892417	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=CHM13_chrY_T0001178;gene_id=CHM13_chrY_G0000390;Parent=CHM13_chrY_T0001178;transcript_name=CHM13_chrY_T0001178;gene_name=MXRA5Y;ID=intron:CHM13_chrY_T0001178:2;Name=MXRA5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	12892418	12894323	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=CHM13_chrY_T0001178;gene_id=CHM13_chrY_G0000390;Parent=CHM13_chrY_T0001178;transcript_name=CHM13_chrY_T0001178;gene_name=MXRA5Y;ID=exon:CHM13_chrY_T0001178:3;Name=MXRA5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	12995450	13339370	.	-	.	source_gene_common_name=ENSG00000291034;source_gene=ENSG00000291034.2;gene_id=CHM13_chrY_G0000391;gene_biotype=lncRNA;gene_name=ENSG00000291034;gene_sources=liftoff;ID=CHM13_chrY_G0000391;Name=ENSG00000291034
CHM13_chrY	CAT	transcript	12995450	13329003	1000	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001179;Name=ENSG00000291034
CHM13_chrY	CAT	exon	12995450	12996725	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001179:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	12996726	13018285	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001179:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13018286	13018386	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001179:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13018387	13022639	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001179:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13022640	13022753	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001179:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13022754	13110430	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001179:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13110431	13110555	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001179:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13110556	13117599	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001179:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13117600	13117698	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001179:4;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13117699	13148806	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001179:4;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13148807	13148844	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001179:5;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13148845	13314008	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001179:5;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314009	13314125	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001179:6;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314126	13314420	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001179:6;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001179:7;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001179:7;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001179:8;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13328951	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001179:8;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13328952	13329003	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001179;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001179;transcript_name=CHM13_chrY_T0001179;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001179:9;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13113151	13329212	1000	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001180;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13113151	13114018	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001180;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001180:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13114019	13148806	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001180;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001180:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13148807	13148844	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001180;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001180:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13148845	13161421	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001180;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001180:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13161422	13161543	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001180;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001180:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13161544	13165317	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001180;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001180:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13165318	13165467	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001180;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001180:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13165468	13314420	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001180;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001180:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001180;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001180:4;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001180;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001180:4;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001180;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001180:5;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13329174	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001180;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001180:5;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13329175	13329212	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001180;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001180;transcript_name=CHM13_chrY_T0001180;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001180:6;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13233821	13329189	1000	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001185;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001185;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001185;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13233821	13234104	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001185;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001185;transcript_name=CHM13_chrY_T0001185;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001185:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13234105	13314420	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001185;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001185;transcript_name=CHM13_chrY_T0001185;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001185:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001185;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001185;transcript_name=CHM13_chrY_T0001185;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001185:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001185;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001185;transcript_name=CHM13_chrY_T0001185;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001185:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001185;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001185;transcript_name=CHM13_chrY_T0001185;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001185:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13329064	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001185;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001185;transcript_name=CHM13_chrY_T0001185;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001185:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13329065	13329189	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001185;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001185;transcript_name=CHM13_chrY_T0001185;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001185:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13233821	13329223	1000	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001186;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001186;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001186;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13233821	13234104	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001186;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001186;transcript_name=CHM13_chrY_T0001186;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001186:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13234105	13314420	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001186;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001186;transcript_name=CHM13_chrY_T0001186;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001186:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001186;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001186;transcript_name=CHM13_chrY_T0001186;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001186:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001186;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001186;transcript_name=CHM13_chrY_T0001186;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001186:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001186;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001186;transcript_name=CHM13_chrY_T0001186;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001186:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13329174	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001186;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001186;transcript_name=CHM13_chrY_T0001186;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001186:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13329175	13329223	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001186;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001186;transcript_name=CHM13_chrY_T0001186;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001186:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13233823	13329175	1000	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001187;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001187;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001187;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13233823	13234104	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001187;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001187;transcript_name=CHM13_chrY_T0001187;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001187:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13234105	13314008	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001187;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001187;transcript_name=CHM13_chrY_T0001187;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001187:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314009	13314125	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001187;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001187;transcript_name=CHM13_chrY_T0001187;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001187:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314126	13314420	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001187;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001187;transcript_name=CHM13_chrY_T0001187;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001187:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001187;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001187;transcript_name=CHM13_chrY_T0001187;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001187:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001187;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001187;transcript_name=CHM13_chrY_T0001187;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001187:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001187;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001187;transcript_name=CHM13_chrY_T0001187;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001187:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13329064	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001187;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001187;transcript_name=CHM13_chrY_T0001187;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001187:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13329065	13329175	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001187;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001187;transcript_name=CHM13_chrY_T0001187;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001187:4;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13247175	13329209	1000	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001191;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001191;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001191;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13247175	13247382	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001191;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001191;transcript_name=CHM13_chrY_T0001191;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001191:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13247383	13314420	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001191;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001191;transcript_name=CHM13_chrY_T0001191;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001191:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001191;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001191;transcript_name=CHM13_chrY_T0001191;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001191:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001191;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001191;transcript_name=CHM13_chrY_T0001191;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001191:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001191;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001191;transcript_name=CHM13_chrY_T0001191;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001191:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13329174	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001191;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001191;transcript_name=CHM13_chrY_T0001191;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001191:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13329175	13329209	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001191;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001191;transcript_name=CHM13_chrY_T0001191;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001191:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13261844	13329209	1000	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001195;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001195;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001195;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13261844	13262203	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001195;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001195;transcript_name=CHM13_chrY_T0001195;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001195:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13262204	13314420	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001195;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001195;transcript_name=CHM13_chrY_T0001195;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001195:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001195;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001195;transcript_name=CHM13_chrY_T0001195;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001195:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001195;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001195;transcript_name=CHM13_chrY_T0001195;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001195:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001195;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001195;transcript_name=CHM13_chrY_T0001195;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001195:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13329174	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001195;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001195;transcript_name=CHM13_chrY_T0001195;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001195:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13329175	13329209	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001195;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001195;transcript_name=CHM13_chrY_T0001195;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001195:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13261848	13328081	1000	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001196;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001196;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001196;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13261848	13262203	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001196;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001196;transcript_name=CHM13_chrY_T0001196;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001196:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13262204	13314420	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001196;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001196;transcript_name=CHM13_chrY_T0001196;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001196:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001196;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001196;transcript_name=CHM13_chrY_T0001196;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001196:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001196;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001196;transcript_name=CHM13_chrY_T0001196;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001196:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328081	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001196;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001196;transcript_name=CHM13_chrY_T0001196;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001196:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13286152	13329247	1000	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001197;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001197;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001197;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13286152	13286380	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001197;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001197;transcript_name=CHM13_chrY_T0001197;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001197:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13286381	13314420	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001197;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001197;transcript_name=CHM13_chrY_T0001197;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001197:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001197;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001197;transcript_name=CHM13_chrY_T0001197;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001197:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001197;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001197;transcript_name=CHM13_chrY_T0001197;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001197:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001197;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001197;transcript_name=CHM13_chrY_T0001197;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001197:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13329174	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001197;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001197;transcript_name=CHM13_chrY_T0001197;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001197:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13329175	13329247	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001197;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001197;transcript_name=CHM13_chrY_T0001197;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001197:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13286152	13328954	1000	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001198;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001198;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001198;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13286152	13286380	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001198;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001198;transcript_name=CHM13_chrY_T0001198;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001198:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13286381	13314420	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001198;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001198;transcript_name=CHM13_chrY_T0001198;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001198:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001198;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001198;transcript_name=CHM13_chrY_T0001198;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001198:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001198;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001198;transcript_name=CHM13_chrY_T0001198;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001198:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001198;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001198;transcript_name=CHM13_chrY_T0001198;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001198:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13328835	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001198;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001198;transcript_name=CHM13_chrY_T0001198;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001198:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13328836	13328954	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001198;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001198;transcript_name=CHM13_chrY_T0001198;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001198:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13286152	13329187	1000	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001199;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001199;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001199;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13286152	13286380	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001199;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001199;transcript_name=CHM13_chrY_T0001199;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001199:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13286381	13289809	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001199;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001199;transcript_name=CHM13_chrY_T0001199;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001199:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13289810	13289958	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001199;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001199;transcript_name=CHM13_chrY_T0001199;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001199:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13289959	13314420	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001199;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001199;transcript_name=CHM13_chrY_T0001199;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001199:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001199;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001199;transcript_name=CHM13_chrY_T0001199;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001199:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001199;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001199;transcript_name=CHM13_chrY_T0001199;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001199:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001199;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001199;transcript_name=CHM13_chrY_T0001199;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001199:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13329064	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001199;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001199;transcript_name=CHM13_chrY_T0001199;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001199:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13329065	13329187	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001199;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001199;transcript_name=CHM13_chrY_T0001199;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001199:4;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13286152	13329184	1000	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001200;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001200;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001200;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13286152	13286380	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001200;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001200;transcript_name=CHM13_chrY_T0001200;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001200:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13286381	13314420	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001200;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001200;transcript_name=CHM13_chrY_T0001200;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001200:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001200;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001200;transcript_name=CHM13_chrY_T0001200;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001200:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001200;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001200;transcript_name=CHM13_chrY_T0001200;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001200:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001200;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001200;transcript_name=CHM13_chrY_T0001200;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001200:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13329064	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001200;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001200;transcript_name=CHM13_chrY_T0001200;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001200:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13329065	13329184	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001200;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001200;transcript_name=CHM13_chrY_T0001200;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001200:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13286163	13329256	1000	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001201;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001201;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001201;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13286163	13286380	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001201;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001201;transcript_name=CHM13_chrY_T0001201;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001201:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13286381	13289809	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001201;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001201;transcript_name=CHM13_chrY_T0001201;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001201:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13289810	13289958	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001201;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001201;transcript_name=CHM13_chrY_T0001201;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001201:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13289959	13314420	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001201;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001201;transcript_name=CHM13_chrY_T0001201;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001201:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001201;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001201;transcript_name=CHM13_chrY_T0001201;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001201:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001201;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001201;transcript_name=CHM13_chrY_T0001201;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001201:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001201;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001201;transcript_name=CHM13_chrY_T0001201;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001201:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13329174	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001201;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001201;transcript_name=CHM13_chrY_T0001201;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001201:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13329175	13329256	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001201;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001201;transcript_name=CHM13_chrY_T0001201;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001201:4;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13286165	13329202	1000	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001202;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001202;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001202;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13286165	13286380	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001202;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001202;transcript_name=CHM13_chrY_T0001202;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001202:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13286381	13306312	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001202;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001202;transcript_name=CHM13_chrY_T0001202;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001202:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13306313	13306450	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001202;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001202;transcript_name=CHM13_chrY_T0001202;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001202:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13306451	13314420	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001202;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001202;transcript_name=CHM13_chrY_T0001202;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001202:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001202;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001202;transcript_name=CHM13_chrY_T0001202;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001202:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001202;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001202;transcript_name=CHM13_chrY_T0001202;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001202:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001202;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001202;transcript_name=CHM13_chrY_T0001202;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001202:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13329174	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001202;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001202;transcript_name=CHM13_chrY_T0001202;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001202:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13329175	13329202	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001202;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001202;transcript_name=CHM13_chrY_T0001202;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001202:4;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13286167	13328550	1000	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001203;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001203;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001203;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13286167	13286380	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001203;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001203;transcript_name=CHM13_chrY_T0001203;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001203:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13286381	13314420	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001203;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001203;transcript_name=CHM13_chrY_T0001203;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001203:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001203;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001203;transcript_name=CHM13_chrY_T0001203;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001203:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001203;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001203;transcript_name=CHM13_chrY_T0001203;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001203:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001203;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001203;transcript_name=CHM13_chrY_T0001203;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001203:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13328517	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001203;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001203;transcript_name=CHM13_chrY_T0001203;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001203:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13328518	13328550	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001203;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001203;transcript_name=CHM13_chrY_T0001203;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001203:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13286168	13328748	1000	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001204;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001204;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001204;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13286168	13286380	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001204;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001204;transcript_name=CHM13_chrY_T0001204;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001204:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13286381	13314420	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001204;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001204;transcript_name=CHM13_chrY_T0001204;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001204:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001204;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001204;transcript_name=CHM13_chrY_T0001204;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001204:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001204;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001204;transcript_name=CHM13_chrY_T0001204;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001204:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001204;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001204;transcript_name=CHM13_chrY_T0001204;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001204:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13328692	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001204;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001204;transcript_name=CHM13_chrY_T0001204;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001204:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13328693	13328748	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001204;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001204;transcript_name=CHM13_chrY_T0001204;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001204:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13286168	13328079	1000	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001205;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001205;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001205;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13286168	13286380	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001205;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001205;transcript_name=CHM13_chrY_T0001205;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001205:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13286381	13289809	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001205;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001205;transcript_name=CHM13_chrY_T0001205;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001205:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13289810	13289958	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001205;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001205;transcript_name=CHM13_chrY_T0001205;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001205:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13289959	13314008	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001205;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001205;transcript_name=CHM13_chrY_T0001205;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001205:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314009	13314125	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001205;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001205;transcript_name=CHM13_chrY_T0001205;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001205:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314126	13314420	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001205;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001205;transcript_name=CHM13_chrY_T0001205;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001205:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001205;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001205;transcript_name=CHM13_chrY_T0001205;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001205:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001205;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001205;transcript_name=CHM13_chrY_T0001205;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001205:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001205;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001205;transcript_name=CHM13_chrY_T0001205;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001205:4;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13286822	13339293	1000	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001206;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001206;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001206;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13286822	13287475	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001206;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001206;transcript_name=CHM13_chrY_T0001206;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001206:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13287476	13314420	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001206;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001206;transcript_name=CHM13_chrY_T0001206;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001206:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001206;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001206;transcript_name=CHM13_chrY_T0001206;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001206:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13314817	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001206;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001206;transcript_name=CHM13_chrY_T0001206;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001206:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314818	13314934	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001206;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001206;transcript_name=CHM13_chrY_T0001206;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001206:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314935	13339265	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001206;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001206;transcript_name=CHM13_chrY_T0001206;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001206:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13339266	13339293	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001206;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001206;transcript_name=CHM13_chrY_T0001206;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001206:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13290820	13325919	1000	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001207;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001207;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001207;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13290820	13290961	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001207;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001207;transcript_name=CHM13_chrY_T0001207;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001207:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13290962	13306312	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001207;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001207;transcript_name=CHM13_chrY_T0001207;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001207:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13306313	13306450	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001207;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001207;transcript_name=CHM13_chrY_T0001207;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001207:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13306451	13314420	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001207;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001207;transcript_name=CHM13_chrY_T0001207;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001207:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001207;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001207;transcript_name=CHM13_chrY_T0001207;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001207:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13314817	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001207;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001207;transcript_name=CHM13_chrY_T0001207;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001207:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314818	13314934	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001207;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001207;transcript_name=CHM13_chrY_T0001207;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001207:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314935	13325514	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001207;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001207;transcript_name=CHM13_chrY_T0001207;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001207:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13325515	13325919	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001207;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001207;transcript_name=CHM13_chrY_T0001207;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001207:4;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13309621	13329209	1000	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001208;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001208;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001208;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13309621	13310223	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001208;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001208;transcript_name=CHM13_chrY_T0001208;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001208:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13310224	13314420	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001208;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001208;transcript_name=CHM13_chrY_T0001208;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001208:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001208;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001208;transcript_name=CHM13_chrY_T0001208;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001208:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001208;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001208;transcript_name=CHM13_chrY_T0001208;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001208:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001208;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001208;transcript_name=CHM13_chrY_T0001208;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001208:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13329174	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001208;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001208;transcript_name=CHM13_chrY_T0001208;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001208:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13329175	13329209	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001208;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001208;transcript_name=CHM13_chrY_T0001208;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001208:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13309624	13328879	1000	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001209;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001209;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001209;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13309624	13310223	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001209;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001209;transcript_name=CHM13_chrY_T0001209;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001209:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13310224	13314420	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001209;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001209;transcript_name=CHM13_chrY_T0001209;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001209:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001209;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001209;transcript_name=CHM13_chrY_T0001209;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001209:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001209;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001209;transcript_name=CHM13_chrY_T0001209;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001209:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001209;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001209;transcript_name=CHM13_chrY_T0001209;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001209:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13328835	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001209;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001209;transcript_name=CHM13_chrY_T0001209;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001209:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13328836	13328879	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001209;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001209;transcript_name=CHM13_chrY_T0001209;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001209:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13309884	13328081	1000	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001210;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001210;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001210;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13309884	13310223	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001210;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001210;transcript_name=CHM13_chrY_T0001210;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001210:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13310224	13314420	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001210;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001210;transcript_name=CHM13_chrY_T0001210;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001210:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001210;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001210;transcript_name=CHM13_chrY_T0001210;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001210:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001210;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001210;transcript_name=CHM13_chrY_T0001210;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001210:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328081	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001210;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001210;transcript_name=CHM13_chrY_T0001210;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001210:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13313743	13328999	1000	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001211;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001211;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001211;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13313743	13314125	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001211;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001211;transcript_name=CHM13_chrY_T0001211;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001211:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314126	13314420	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001211;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001211;transcript_name=CHM13_chrY_T0001211;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001211:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001211;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001211;transcript_name=CHM13_chrY_T0001211;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001211:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001211;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001211;transcript_name=CHM13_chrY_T0001211;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001211:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13328079	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001211;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001211;transcript_name=CHM13_chrY_T0001211;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001211:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13328080	13328951	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001211;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001211;transcript_name=CHM13_chrY_T0001211;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001211:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13328952	13328999	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001211;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001211;transcript_name=CHM13_chrY_T0001211;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001211:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13313748	13327997	1000	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001212;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001212;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001212;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13313748	13314125	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001212;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001212;transcript_name=CHM13_chrY_T0001212;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001212:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314126	13314420	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001212;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001212;transcript_name=CHM13_chrY_T0001212;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001212:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001212;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001212;transcript_name=CHM13_chrY_T0001212;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001212:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13314817	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001212;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001212;transcript_name=CHM13_chrY_T0001212;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001212:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13314818	13314934	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001212;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001212;transcript_name=CHM13_chrY_T0001212;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001212:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314935	13327940	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001212;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001212;transcript_name=CHM13_chrY_T0001212;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001212:2;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13327997	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001212;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001212;transcript_name=CHM13_chrY_T0001212;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001212:3;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13333039	13339370	1000	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001214;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_G0000391;transcript_name=CHM13_chrY_T0001214;gene_name=ENSG00000291034;ID=CHM13_chrY_T0001214;Name=ENSG00000291034
CHM13_chrY	CAT	exon	13333039	13333445	.	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001214;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001214;transcript_name=CHM13_chrY_T0001214;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001214:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13333446	13339265	.	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001214;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001214;transcript_name=CHM13_chrY_T0001214;gene_name=ENSG00000291034;ID=intron:CHM13_chrY_T0001214:0;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13339266	13339370	.	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=CHM13_chrY_T0001214;gene_id=CHM13_chrY_G0000391;Parent=CHM13_chrY_T0001214;transcript_name=CHM13_chrY_T0001214;gene_name=ENSG00000291034;ID=exon:CHM13_chrY_T0001214:1;Name=ENSG00000291034;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13152188	13152893	.	+	.	source_gene_common_name=RPS24P1;source_gene=ENSG00000236477.1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;gene_id=CHM13_chrY_G0000392;gene_biotype=processed_pseudogene;gene_name=RPS24P1;gene_sources=liftoff;ID=CHM13_chrY_G0000392;Name=RPS24P1
CHM13_chrY	CAT	transcript	13152188	13152893	1000	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=CHM13_chrY_T0001181;gene_id=CHM13_chrY_G0000392;Parent=CHM13_chrY_G0000392;transcript_name=CHM13_chrY_T0001181;gene_name=RPS24P1;ID=CHM13_chrY_T0001181;Name=RPS24P1
CHM13_chrY	CAT	exon	13152188	13152313	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=CHM13_chrY_T0001181;gene_id=CHM13_chrY_G0000392;Parent=CHM13_chrY_T0001181;transcript_name=CHM13_chrY_T0001181;gene_name=RPS24P1;ID=exon:CHM13_chrY_T0001181:0;Name=RPS24P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13152314	13152648	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=CHM13_chrY_T0001181;gene_id=CHM13_chrY_G0000392;Parent=CHM13_chrY_T0001181;transcript_name=CHM13_chrY_T0001181;gene_name=RPS24P1;ID=intron:CHM13_chrY_T0001181:0;Name=RPS24P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13152649	13152893	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=CHM13_chrY_T0001181;gene_id=CHM13_chrY_G0000392;Parent=CHM13_chrY_T0001181;transcript_name=CHM13_chrY_T0001181;gene_name=RPS24P1;ID=exon:CHM13_chrY_T0001181:1;Name=RPS24P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13159757	13165469	.	-	.	source_gene_common_name=ARSFP1;source_gene=ENSG00000232226.2;gene_id=CHM13_chrY_G0000393;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ARSFP1;gene_sources=liftoff;ID=CHM13_chrY_G0000393;Name=ARSFP1
CHM13_chrY	CAT	transcript	13159757	13165469	1000	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=CHM13_chrY_T0001182;gene_id=CHM13_chrY_G0000393;Parent=CHM13_chrY_G0000393;transcript_name=CHM13_chrY_T0001182;gene_name=ARSFP1;ID=CHM13_chrY_T0001182;Name=ARSFP1
CHM13_chrY	CAT	exon	13159757	13159954	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=CHM13_chrY_T0001182;gene_id=CHM13_chrY_G0000393;Parent=CHM13_chrY_T0001182;transcript_name=CHM13_chrY_T0001182;gene_name=ARSFP1;ID=exon:CHM13_chrY_T0001182:0;Name=ARSFP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13159955	13161416	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=CHM13_chrY_T0001182;gene_id=CHM13_chrY_G0000393;Parent=CHM13_chrY_T0001182;transcript_name=CHM13_chrY_T0001182;gene_name=ARSFP1;ID=intron:CHM13_chrY_T0001182:0;Name=ARSFP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13161417	13161543	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=CHM13_chrY_T0001182;gene_id=CHM13_chrY_G0000393;Parent=CHM13_chrY_T0001182;transcript_name=CHM13_chrY_T0001182;gene_name=ARSFP1;ID=exon:CHM13_chrY_T0001182:1;Name=ARSFP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13161544	13165317	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=CHM13_chrY_T0001182;gene_id=CHM13_chrY_G0000393;Parent=CHM13_chrY_T0001182;transcript_name=CHM13_chrY_T0001182;gene_name=ARSFP1;ID=intron:CHM13_chrY_T0001182:1;Name=ARSFP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13165318	13165469	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=CHM13_chrY_T0001182;gene_id=CHM13_chrY_G0000393;Parent=CHM13_chrY_T0001182;transcript_name=CHM13_chrY_T0001182;gene_name=ARSFP1;ID=exon:CHM13_chrY_T0001182:2;Name=ARSFP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13180901	13181192	.	+	.	source_gene_common_name=RN7SL702P;source_gene=ENSG00000243980.3;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;gene_id=CHM13_chrY_G0000394;gene_biotype=misc_RNA;gene_name=RN7SL702P;gene_sources=liftoff;ID=CHM13_chrY_G0000394;Name=RN7SL702P
CHM13_chrY	CAT	transcript	13180901	13181192	1000	+	.	source_transcript=ENST00000488394.3;source_transcript_name=RN7SL702P-201;source_gene=ENSG00000243980.3;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000243980.3;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000488394.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000488394.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL702P;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;transcript_id=CHM13_chrY_T0001183;gene_id=CHM13_chrY_G0000394;Parent=CHM13_chrY_G0000394;transcript_name=CHM13_chrY_T0001183;gene_name=RN7SL702P;ID=CHM13_chrY_T0001183;Name=RN7SL702P
CHM13_chrY	CAT	exon	13180901	13181192	.	+	.	source_transcript=ENST00000488394.3;source_transcript_name=RN7SL702P-201;source_gene=ENSG00000243980.3;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000243980.3;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000488394.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000488394.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL702P;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;transcript_id=CHM13_chrY_T0001183;gene_id=CHM13_chrY_G0000394;Parent=CHM13_chrY_T0001183;transcript_name=CHM13_chrY_T0001183;gene_name=RN7SL702P;ID=exon:CHM13_chrY_T0001183:0;Name=RN7SL702P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13229061	13230273	.	+	.	source_gene_common_name=FAM8A4P;source_gene=ENSG00000232730.1;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;gene_id=CHM13_chrY_G0000395;gene_biotype=processed_pseudogene;gene_name=FAM8A4P;gene_sources=liftoff;ID=CHM13_chrY_G0000395;Name=FAM8A4P
CHM13_chrY	CAT	transcript	13229061	13230273	1000	+	.	source_transcript=ENST00000435433.1;source_transcript_name=FAM8A4P-201;source_gene=ENSG00000232730.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232730.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435433.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM8A4P;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;transcript_id=CHM13_chrY_T0001184;gene_id=CHM13_chrY_G0000395;Parent=CHM13_chrY_G0000395;transcript_name=CHM13_chrY_T0001184;gene_name=FAM8A4P;ID=CHM13_chrY_T0001184;Name=FAM8A4P
CHM13_chrY	CAT	exon	13229061	13230273	.	+	.	source_transcript=ENST00000435433.1;source_transcript_name=FAM8A4P-201;source_gene=ENSG00000232730.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232730.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435433.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM8A4P;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;transcript_id=CHM13_chrY_T0001184;gene_id=CHM13_chrY_G0000395;Parent=CHM13_chrY_T0001184;transcript_name=CHM13_chrY_T0001184;gene_name=FAM8A4P;ID=exon:CHM13_chrY_T0001184:0;Name=FAM8A4P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13235080	13255114	.	+	.	source_gene_common_name=ENSG00000290435;source_gene=ENSG00000290435.2;gene_id=CHM13_chrY_G0000396;gene_biotype=lncRNA;gene_name=ENSG00000290435;gene_sources=liftoff;ID=CHM13_chrY_G0000396;Name=ENSG00000290435
CHM13_chrY	CAT	transcript	13235080	13254947	1000	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001188;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_G0000396;transcript_name=CHM13_chrY_T0001188;gene_name=ENSG00000290435;ID=CHM13_chrY_T0001188;Name=ENSG00000290435
CHM13_chrY	CAT	exon	13235080	13235481	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001188;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_T0001188;transcript_name=CHM13_chrY_T0001188;gene_name=ENSG00000290435;ID=exon:CHM13_chrY_T0001188:0;Name=ENSG00000290435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13235482	13254567	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001188;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_T0001188;transcript_name=CHM13_chrY_T0001188;gene_name=ENSG00000290435;ID=intron:CHM13_chrY_T0001188:0;Name=ENSG00000290435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13254568	13254947	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001188;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_T0001188;transcript_name=CHM13_chrY_T0001188;gene_name=ENSG00000290435;ID=exon:CHM13_chrY_T0001188:1;Name=ENSG00000290435;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13235367	13247351	1000	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001189;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_G0000396;transcript_name=CHM13_chrY_T0001189;gene_name=ENSG00000290435;ID=CHM13_chrY_T0001189;Name=ENSG00000290435
CHM13_chrY	CAT	exon	13235367	13235481	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001189;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_T0001189;transcript_name=CHM13_chrY_T0001189;gene_name=ENSG00000290435;ID=exon:CHM13_chrY_T0001189:0;Name=ENSG00000290435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13235482	13247248	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001189;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_T0001189;transcript_name=CHM13_chrY_T0001189;gene_name=ENSG00000290435;ID=intron:CHM13_chrY_T0001189:0;Name=ENSG00000290435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13247249	13247351	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001189;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_T0001189;transcript_name=CHM13_chrY_T0001189;gene_name=ENSG00000290435;ID=exon:CHM13_chrY_T0001189:1;Name=ENSG00000290435;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13239511	13255114	1000	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001190;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_G0000396;transcript_name=CHM13_chrY_T0001190;gene_name=ENSG00000290435;ID=CHM13_chrY_T0001190;Name=ENSG00000290435
CHM13_chrY	CAT	exon	13239511	13239730	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001190;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_T0001190;transcript_name=CHM13_chrY_T0001190;gene_name=ENSG00000290435;ID=exon:CHM13_chrY_T0001190:0;Name=ENSG00000290435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13239731	13254567	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001190;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_T0001190;transcript_name=CHM13_chrY_T0001190;gene_name=ENSG00000290435;ID=intron:CHM13_chrY_T0001190:0;Name=ENSG00000290435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13254568	13255114	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001190;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_T0001190;transcript_name=CHM13_chrY_T0001190;gene_name=ENSG00000290435;ID=exon:CHM13_chrY_T0001190:1;Name=ENSG00000290435;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13252513	13254927	1000	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001193;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_G0000396;transcript_name=CHM13_chrY_T0001193;gene_name=ENSG00000290435;ID=CHM13_chrY_T0001193;Name=ENSG00000290435
CHM13_chrY	CAT	exon	13252513	13252651	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001193;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_T0001193;transcript_name=CHM13_chrY_T0001193;gene_name=ENSG00000290435;ID=exon:CHM13_chrY_T0001193:0;Name=ENSG00000290435;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13252652	13254567	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001193;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_T0001193;transcript_name=CHM13_chrY_T0001193;gene_name=ENSG00000290435;ID=intron:CHM13_chrY_T0001193:0;Name=ENSG00000290435;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13254568	13254927	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=CHM13_chrY_T0001193;gene_id=CHM13_chrY_G0000396;Parent=CHM13_chrY_T0001193;transcript_name=CHM13_chrY_T0001193;gene_name=ENSG00000290435;ID=exon:CHM13_chrY_T0001193:1;Name=ENSG00000290435;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13247249	13254919	.	+	.	source_gene_common_name=ARSLP1;source_gene=ENSG00000224060.4;gene_id=CHM13_chrY_G0000397;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ARSLP1;gene_sources=liftoff;ID=CHM13_chrY_G0000397;Name=ARSLP1
CHM13_chrY	CAT	transcript	13247249	13254919	1000	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=CHM13_chrY_T0001192;gene_id=CHM13_chrY_G0000397;Parent=CHM13_chrY_G0000397;transcript_name=CHM13_chrY_T0001192;gene_name=ARSLP1;ID=CHM13_chrY_T0001192;Name=ARSLP1
CHM13_chrY	CAT	exon	13247249	13247411	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=CHM13_chrY_T0001192;gene_id=CHM13_chrY_G0000397;Parent=CHM13_chrY_T0001192;transcript_name=CHM13_chrY_T0001192;gene_name=ARSLP1;ID=exon:CHM13_chrY_T0001192:0;Name=ARSLP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13247412	13248611	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=CHM13_chrY_T0001192;gene_id=CHM13_chrY_G0000397;Parent=CHM13_chrY_T0001192;transcript_name=CHM13_chrY_T0001192;gene_name=ARSLP1;ID=intron:CHM13_chrY_T0001192:0;Name=ARSLP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13248612	13248731	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=CHM13_chrY_T0001192;gene_id=CHM13_chrY_G0000397;Parent=CHM13_chrY_T0001192;transcript_name=CHM13_chrY_T0001192;gene_name=ARSLP1;ID=exon:CHM13_chrY_T0001192:1;Name=ARSLP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13248732	13254567	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=CHM13_chrY_T0001192;gene_id=CHM13_chrY_G0000397;Parent=CHM13_chrY_T0001192;transcript_name=CHM13_chrY_T0001192;gene_name=ARSLP1;ID=intron:CHM13_chrY_T0001192:1;Name=ARSLP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13254568	13254919	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=CHM13_chrY_T0001192;gene_id=CHM13_chrY_G0000397;Parent=CHM13_chrY_T0001192;transcript_name=CHM13_chrY_T0001192;gene_name=ARSLP1;ID=exon:CHM13_chrY_T0001192:2;Name=ARSLP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13261528	13294961	.	+	.	source_gene_common_name=ARSDP1;source_gene=ENSG00000225117.2;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;gene_id=CHM13_chrY_G0000398;gene_biotype=unprocessed_pseudogene;gene_name=ARSDP1;gene_sources=liftoff;ID=CHM13_chrY_G0000398;Name=ARSDP1
CHM13_chrY	CAT	transcript	13261528	13294961	1000	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_G0000398;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=CHM13_chrY_T0001194;Name=ARSDP1
CHM13_chrY	CAT	exon	13261528	13261570	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=exon:CHM13_chrY_T0001194:0;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13261571	13269656	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=intron:CHM13_chrY_T0001194:0;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13269657	13269806	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=exon:CHM13_chrY_T0001194:1;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13269807	13273373	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=intron:CHM13_chrY_T0001194:1;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13273374	13273495	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=exon:CHM13_chrY_T0001194:2;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13273496	13274630	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=intron:CHM13_chrY_T0001194:2;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13274631	13274752	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=exon:CHM13_chrY_T0001194:3;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13274753	13281296	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=intron:CHM13_chrY_T0001194:3;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13281297	13281711	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=exon:CHM13_chrY_T0001194:4;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13281712	13285316	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=intron:CHM13_chrY_T0001194:4;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13285317	13285453	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=exon:CHM13_chrY_T0001194:5;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13285454	13289966	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=intron:CHM13_chrY_T0001194:5;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13289967	13290100	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=exon:CHM13_chrY_T0001194:6;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13290101	13290771	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=intron:CHM13_chrY_T0001194:6;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13290772	13290934	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=exon:CHM13_chrY_T0001194:7;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13290935	13291941	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=intron:CHM13_chrY_T0001194:7;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13291942	13292063	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=exon:CHM13_chrY_T0001194:8;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13292064	13294602	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=intron:CHM13_chrY_T0001194:8;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13294603	13294961	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=CHM13_chrY_T0001194;gene_id=CHM13_chrY_G0000398;Parent=CHM13_chrY_T0001194;transcript_name=CHM13_chrY_T0001194;gene_name=ARSDP1;ID=exon:CHM13_chrY_T0001194:9;Name=ARSDP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13314421	13327947	.	-	.	source_gene_common_name=GYG2P1;source_gene=ENSG00000206159.14;gene_id=CHM13_chrY_G0000399;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GYG2P1;gene_sources=liftoff;ID=CHM13_chrY_G0000399;Name=GYG2P1
CHM13_chrY	CAT	transcript	13314421	13327947	1000	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=CHM13_chrY_T0001213;gene_id=CHM13_chrY_G0000399;Parent=CHM13_chrY_G0000399;transcript_name=CHM13_chrY_T0001213;gene_name=GYG2P1;ID=CHM13_chrY_T0001213;Name=GYG2P1
CHM13_chrY	CAT	exon	13314421	13314562	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=CHM13_chrY_T0001213;gene_id=CHM13_chrY_G0000399;Parent=CHM13_chrY_T0001213;transcript_name=CHM13_chrY_T0001213;gene_name=GYG2P1;ID=exon:CHM13_chrY_T0001213:0;Name=GYG2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13314563	13327940	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=CHM13_chrY_T0001213;gene_id=CHM13_chrY_G0000399;Parent=CHM13_chrY_T0001213;transcript_name=CHM13_chrY_T0001213;gene_name=GYG2P1;ID=intron:CHM13_chrY_T0001213:0;Name=GYG2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13327941	13327947	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=CHM13_chrY_T0001213;gene_id=CHM13_chrY_G0000399;Parent=CHM13_chrY_T0001213;transcript_name=CHM13_chrY_T0001213;gene_name=GYG2P1;ID=exon:CHM13_chrY_T0001213:1;Name=GYG2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13347671	13414980	.	-	.	source_gene_common_name=XGY1;source_gene=ENSG00000227447.1;gene_id=CHM13_chrY_G0000400;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XGY1;gene_sources=liftoff;ID=CHM13_chrY_G0000400;Name=XGY1
CHM13_chrY	CAT	transcript	13347671	13414980	1000	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_G0000400;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=CHM13_chrY_T0001215;Name=XGY1
CHM13_chrY	CAT	exon	13347671	13347787	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=exon:CHM13_chrY_T0001215:0;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13347788	13350889	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=intron:CHM13_chrY_T0001215:0;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13350890	13350925	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=exon:CHM13_chrY_T0001215:1;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13350926	13363759	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=intron:CHM13_chrY_T0001215:1;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13363760	13363810	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=exon:CHM13_chrY_T0001215:2;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13363811	13367316	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=intron:CHM13_chrY_T0001215:2;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13367317	13367374	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=exon:CHM13_chrY_T0001215:3;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13367375	13376057	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=intron:CHM13_chrY_T0001215:3;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13376058	13376120	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=exon:CHM13_chrY_T0001215:4;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13376121	13392342	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=intron:CHM13_chrY_T0001215:4;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13392343	13392366	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=exon:CHM13_chrY_T0001215:5;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13392367	13396045	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=intron:CHM13_chrY_T0001215:5;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13396046	13396081	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=exon:CHM13_chrY_T0001215:6;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13396082	13414919	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=intron:CHM13_chrY_T0001215:6;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13414920	13414980	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=CHM13_chrY_T0001215;gene_id=CHM13_chrY_G0000400;Parent=CHM13_chrY_T0001215;transcript_name=CHM13_chrY_T0001215;gene_name=XGY1;ID=exon:CHM13_chrY_T0001215:7;Name=XGY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13386405	13415327	.	-	.	source_gene_common_name=ENSG00000296286;source_gene=ENSG00000296286.1;gene_id=CHM13_chrY_G0000401;gene_biotype=lncRNA;gene_name=ENSG00000296286;gene_sources=liftoff;ID=CHM13_chrY_G0000401;Name=ENSG00000296286
CHM13_chrY	CAT	transcript	13386405	13415327	1000	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=CHM13_chrY_T0001216;gene_id=CHM13_chrY_G0000401;Parent=CHM13_chrY_G0000401;transcript_name=CHM13_chrY_T0001216;gene_name=ENSG00000296286;ID=CHM13_chrY_T0001216;Name=ENSG00000296286
CHM13_chrY	CAT	exon	13386405	13386900	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=CHM13_chrY_T0001216;gene_id=CHM13_chrY_G0000401;Parent=CHM13_chrY_T0001216;transcript_name=CHM13_chrY_T0001216;gene_name=ENSG00000296286;ID=exon:CHM13_chrY_T0001216:0;Name=ENSG00000296286;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13386901	13392342	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=CHM13_chrY_T0001216;gene_id=CHM13_chrY_G0000401;Parent=CHM13_chrY_T0001216;transcript_name=CHM13_chrY_T0001216;gene_name=ENSG00000296286;ID=intron:CHM13_chrY_T0001216:0;Name=ENSG00000296286;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13392343	13392366	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=CHM13_chrY_T0001216;gene_id=CHM13_chrY_G0000401;Parent=CHM13_chrY_T0001216;transcript_name=CHM13_chrY_T0001216;gene_name=ENSG00000296286;ID=exon:CHM13_chrY_T0001216:1;Name=ENSG00000296286;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13392367	13414919	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=CHM13_chrY_T0001216;gene_id=CHM13_chrY_G0000401;Parent=CHM13_chrY_T0001216;transcript_name=CHM13_chrY_T0001216;gene_name=ENSG00000296286;ID=intron:CHM13_chrY_T0001216:1;Name=ENSG00000296286;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13414920	13415327	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=CHM13_chrY_T0001216;gene_id=CHM13_chrY_G0000401;Parent=CHM13_chrY_T0001216;transcript_name=CHM13_chrY_T0001216;gene_name=ENSG00000296286;ID=exon:CHM13_chrY_T0001216:2;Name=ENSG00000296286;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13445461	13769113	.	+	.	source_gene_common_name=USP9Y;source_gene=ENSG00000114374.13;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;gene_id=CHM13_chrY_G0000402;gene_biotype=protein_coding;gene_name=USP9Y;gene_sources=liftoff;ID=CHM13_chrY_G0000402;Name=USP9Y
CHM13_chrY	CAT	transcript	13445461	13617146	1000	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_G0000402;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=CHM13_chrY_T0001217;Name=USP9Y
CHM13_chrY	CAT	exon	13445461	13445818	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001217:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13445819	13452594	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001217:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13452595	13452749	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001217:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13452750	13453921	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001217:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13453922	13454061	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001217:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13454062	13570630	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001217:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13570631	13570981	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001217:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13570982	13572914	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001217:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13572915	13572961	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001217:4;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13572962	13594785	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001217:4;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13594786	13594879	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001217:5;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13594880	13598598	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001217:5;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13598599	13598714	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001217:6;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13598715	13610282	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001217:6;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13610283	13610328	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001217:7;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13610329	13616036	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001217:7;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13616037	13617146	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=CHM13_chrY_T0001217;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001217;transcript_name=CHM13_chrY_T0001217;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001217:8;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13570609	13600506	1000	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=CHM13_chrY_T0001225;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_G0000402;transcript_name=CHM13_chrY_T0001225;gene_name=USP9Y;ID=CHM13_chrY_T0001225;Name=USP9Y
CHM13_chrY	CAT	exon	13570609	13570981	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=CHM13_chrY_T0001225;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001225;transcript_name=CHM13_chrY_T0001225;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001225:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13570982	13572914	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=CHM13_chrY_T0001225;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001225;transcript_name=CHM13_chrY_T0001225;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001225:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13572915	13572961	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=CHM13_chrY_T0001225;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001225;transcript_name=CHM13_chrY_T0001225;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001225:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13572962	13594785	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=CHM13_chrY_T0001225;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001225;transcript_name=CHM13_chrY_T0001225;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001225:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13594786	13594879	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=CHM13_chrY_T0001225;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001225;transcript_name=CHM13_chrY_T0001225;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001225:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13594880	13595736	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=CHM13_chrY_T0001225;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001225;transcript_name=CHM13_chrY_T0001225;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001225:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13595737	13600506	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=CHM13_chrY_T0001225;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001225;transcript_name=CHM13_chrY_T0001225;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001225:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13570643	13769076	100	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_G0000402;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CHM13_chrY_T0001226;Name=USP9Y
CHM13_chrY	CAT	exon	13570643	13570981	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13570982	13572914	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13572915	13572961	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13572962	13594785	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13594786	13594879	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13594880	13610282	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13610283	13610328	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13610329	13617664	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13617665	13617820	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:4;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13617725	13617820	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	13617725	13617727	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=start_codon:CHM13_chrY_T0001226;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13617821	13628866	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:4;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13628867	13629015	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:5;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13628867	13629015	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13629016	13630384	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:5;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13630385	13630464	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:6;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13630385	13630464	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13630465	13633389	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:6;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13633390	13633502	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:7;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13633390	13633502	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13633503	13634851	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:7;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13634852	13635070	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:8;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13634852	13635070	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:4;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13635071	13643888	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:8;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13643889	13644004	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:9;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13643889	13644004	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:5;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13644005	13644274	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:9;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13644275	13644526	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:10;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13644275	13644526	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:6;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13644527	13644687	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:10;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13644688	13644826	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:11;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13644688	13644826	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:7;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13644827	13646433	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:11;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13646434	13646586	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:12;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13646434	13646586	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:8;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13646587	13647801	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:12;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13647802	13647906	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:13;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13647802	13647906	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:9;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13647907	13665468	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:13;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13665469	13665675	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:14;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13665469	13665675	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:10;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13665676	13666782	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:14;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13666783	13666919	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:15;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13666783	13666919	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:11;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13666920	13668760	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:15;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13668761	13668894	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:16;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13668761	13668894	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:12;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13668895	13679345	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:16;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13679346	13679433	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:17;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13679346	13679433	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:13;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13679434	13681860	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:17;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13681861	13682203	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:18;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13681861	13682203	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:14;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13682204	13683748	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:18;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13683749	13683844	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:19;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13683749	13683844	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:15;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13683845	13684926	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:19;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13684927	13685138	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:20;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13684927	13685138	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:16;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13685139	13686296	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:20;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13686297	13686537	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:21;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13686297	13686537	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:17;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13686538	13686883	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:21;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13686884	13687033	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:22;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13686884	13687033	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:18;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13687034	13687803	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:22;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13687804	13687924	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:23;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13687804	13687924	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:19;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13687925	13694480	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:23;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13694481	13694611	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:24;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13694481	13694611	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:20;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13694612	13694798	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:24;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13694799	13695077	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:25;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13694799	13695077	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:21;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13695078	13698683	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:25;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13698684	13698809	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:26;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13698684	13698809	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:22;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13698810	13699775	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:26;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13699776	13699901	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:27;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13699776	13699901	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:23;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13699902	13701308	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:27;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13701309	13701478	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:28;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13701309	13701478	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:24;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13701479	13718457	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:28;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13718458	13718566	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:29;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13718458	13718566	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:25;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13718567	13718950	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:29;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13718951	13719097	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:30;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13718951	13719097	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:26;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13719098	13719913	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:30;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13719914	13720060	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:31;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13719914	13720060	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:27;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13720061	13721108	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:31;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13721109	13721331	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:32;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13721109	13721331	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:28;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13721332	13724402	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:32;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13724403	13724623	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:33;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13724403	13724623	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:29;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13724624	13726698	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:33;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13726699	13726889	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:34;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13726699	13726889	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:30;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13726890	13741963	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:34;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13741964	13742137	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:35;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13741964	13742137	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:31;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13742138	13746186	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:35;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13746187	13746328	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:36;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13746187	13746328	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:32;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13746329	13748139	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:36;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13748140	13748890	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:37;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13748140	13748890	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:33;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13748891	13749285	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:37;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13749286	13749409	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:38;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13749286	13749409	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:34;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13749410	13750513	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:38;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13750514	13750739	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:39;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13750514	13750739	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:35;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13750740	13751337	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:39;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13751338	13751467	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:40;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13751338	13751467	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:36;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13751468	13754606	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:40;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13754607	13754792	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:41;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13754607	13754792	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:37;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13754793	13755206	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:41;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13755207	13755427	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:42;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13755207	13755427	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:38;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13755428	13755512	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:42;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13755513	13755601	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:43;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13755513	13755601	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:39;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13755602	13764613	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:43;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13764614	13764770	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:44;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13764614	13764770	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:40;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13764771	13764906	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:44;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13764907	13765119	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:45;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13764907	13765119	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:41;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13765120	13765839	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:45;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13765840	13765935	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:46;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13765840	13765935	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:42;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13765936	13767552	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001226:46;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13767553	13769076	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001226:47;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13767553	13767690	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001226:43;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	13767688	13767690	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=CHM13_chrY_T0001226;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001226;transcript_name=CHM13_chrY_T0001226;gene_name=USP9Y;ID=stop_codon:CHM13_chrY_T0001226;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13570812	13596528	1000	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=CHM13_chrY_T0001227;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_G0000402;transcript_name=CHM13_chrY_T0001227;gene_name=USP9Y;ID=CHM13_chrY_T0001227;Name=USP9Y
CHM13_chrY	CAT	exon	13570812	13570981	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=CHM13_chrY_T0001227;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001227;transcript_name=CHM13_chrY_T0001227;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001227:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13570982	13572914	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=CHM13_chrY_T0001227;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001227;transcript_name=CHM13_chrY_T0001227;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001227:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13572915	13572961	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=CHM13_chrY_T0001227;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001227;transcript_name=CHM13_chrY_T0001227;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001227:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13572962	13594785	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=CHM13_chrY_T0001227;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001227;transcript_name=CHM13_chrY_T0001227;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001227:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13594786	13594879	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=CHM13_chrY_T0001227;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001227;transcript_name=CHM13_chrY_T0001227;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001227:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13594880	13595957	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=CHM13_chrY_T0001227;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001227;transcript_name=CHM13_chrY_T0001227;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001227:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13595958	13596528	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=CHM13_chrY_T0001227;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001227;transcript_name=CHM13_chrY_T0001227;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001227:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13609504	13769113	100	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_G0000402;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CHM13_chrY_T0001228;Name=USP9Y
CHM13_chrY	CAT	exon	13609504	13610328	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13610329	13616910	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13616911	13616970	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13616971	13617664	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13617665	13617820	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13617725	13617820	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	13617725	13617727	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=start_codon:CHM13_chrY_T0001228;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13617821	13628866	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13628867	13629015	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13628867	13629015	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13629016	13630384	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13630385	13630464	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:4;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13630385	13630464	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13630465	13633389	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:4;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13633390	13633502	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:5;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13633390	13633502	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13633503	13634851	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:5;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13634852	13635070	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:6;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13634852	13635070	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:4;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13635071	13643888	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:6;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13643889	13644004	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:7;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13643889	13644004	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:5;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13644005	13644274	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:7;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13644275	13644526	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:8;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13644275	13644526	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:6;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13644527	13644687	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:8;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13644688	13644826	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:9;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13644688	13644826	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:7;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13644827	13646433	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:9;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13646434	13646586	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:10;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13646434	13646586	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:8;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13646587	13647801	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:10;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13647802	13647906	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:11;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13647802	13647906	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:9;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13647907	13665468	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:11;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13665469	13665675	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:12;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13665469	13665675	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:10;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13665676	13666782	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:12;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13666783	13666919	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:13;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13666783	13666919	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:11;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13666920	13668760	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:13;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13668761	13668894	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:14;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13668761	13668894	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:12;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13668895	13679345	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:14;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13679346	13679433	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:15;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13679346	13679433	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:13;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13679434	13681860	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:15;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13681861	13682203	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:16;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13681861	13682203	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:14;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13682204	13683748	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:16;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13683749	13683844	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:17;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13683749	13683844	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:15;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13683845	13684926	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:17;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13684927	13685138	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:18;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13684927	13685138	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:16;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13685139	13686296	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:18;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13686297	13686537	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:19;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13686297	13686537	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:17;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13686538	13686883	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:19;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13686884	13687033	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:20;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13686884	13687033	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:18;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13687034	13687803	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:20;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13687804	13687924	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:21;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13687804	13687924	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:19;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13687925	13694480	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:21;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13694481	13694611	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:22;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13694481	13694611	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:20;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13694612	13694798	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:22;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13694799	13695077	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:23;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13694799	13695077	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:21;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13695078	13698683	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:23;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13698684	13698809	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:24;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13698684	13698809	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:22;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13698810	13699775	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:24;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13699776	13699901	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:25;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13699776	13699901	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:23;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13699902	13701308	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:25;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13701309	13701478	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:26;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13701309	13701478	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:24;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13701479	13718457	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:26;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13718458	13718566	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:27;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13718458	13718566	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:25;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13718567	13718950	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:27;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13718951	13719097	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:28;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13718951	13719097	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:26;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13719098	13719913	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:28;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13719914	13720060	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:29;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13719914	13720060	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:27;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13720061	13721108	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:29;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13721109	13721331	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:30;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13721109	13721331	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:28;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13721332	13724402	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:30;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13724403	13724623	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:31;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13724403	13724623	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:29;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13724624	13726698	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:31;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13726699	13726889	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:32;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13726699	13726889	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:30;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13726890	13741963	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:32;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13741964	13742137	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:33;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13741964	13742137	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:31;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13742138	13746186	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:33;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13746187	13746328	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:34;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13746187	13746328	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:32;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13746329	13748139	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:34;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13748140	13748890	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:35;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13748140	13748890	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:33;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13748891	13749285	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:35;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13749286	13749409	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:36;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13749286	13749409	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:34;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13749410	13750513	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:36;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13750514	13750739	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:37;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13750514	13750739	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:35;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13750740	13751337	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:37;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13751338	13751467	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:38;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13751338	13751467	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:36;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13751468	13754606	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:38;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13754607	13754792	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:39;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13754607	13754792	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:37;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13754793	13755206	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:39;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13755207	13755427	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:40;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13755207	13755427	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:38;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13755428	13755512	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:40;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13755513	13755601	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:41;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13755513	13755601	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:39;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13755602	13764613	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:41;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13764614	13764770	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:42;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13764614	13764770	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:40;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13764771	13764906	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:42;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13764907	13765119	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:43;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13764907	13765119	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:41;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13765120	13765839	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:43;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13765840	13765935	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:44;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13765840	13765935	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:42;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13765936	13767552	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001228:44;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13767553	13769113	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001228:45;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13767553	13767690	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001228:43;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	13767688	13767690	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=CHM13_chrY_T0001228;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001228;transcript_name=CHM13_chrY_T0001228;gene_name=USP9Y;ID=stop_codon:CHM13_chrY_T0001228;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13610313	13629481	1000	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=CHM13_chrY_T0001229;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_G0000402;transcript_name=CHM13_chrY_T0001229;gene_name=USP9Y;ID=CHM13_chrY_T0001229;Name=USP9Y
CHM13_chrY	CAT	exon	13610313	13610328	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=CHM13_chrY_T0001229;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001229;transcript_name=CHM13_chrY_T0001229;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001229:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13610329	13617664	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=CHM13_chrY_T0001229;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001229;transcript_name=CHM13_chrY_T0001229;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001229:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13617665	13617820	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=CHM13_chrY_T0001229;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001229;transcript_name=CHM13_chrY_T0001229;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001229:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13617821	13628866	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=CHM13_chrY_T0001229;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001229;transcript_name=CHM13_chrY_T0001229;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001229:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13628867	13629481	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=CHM13_chrY_T0001229;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001229;transcript_name=CHM13_chrY_T0001229;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001229:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13617713	13769113	1000	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_G0000402;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=CHM13_chrY_T0001230;Name=USP9Y
CHM13_chrY	CAT	exon	13617713	13617820	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13617821	13628866	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13628867	13629015	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13629016	13630384	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13630385	13630464	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13630465	13633389	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13633390	13633502	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13633503	13634851	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13634852	13635070	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:4;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13635071	13643888	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:4;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13643889	13644004	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:5;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13644005	13644274	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:5;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13644275	13644526	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:6;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13644527	13644687	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:6;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13644688	13644826	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:7;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13644827	13646433	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:7;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13646434	13646586	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:8;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13646587	13647801	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:8;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13647802	13647906	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:9;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13647907	13665468	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:9;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13665469	13665675	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:10;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13665676	13666782	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:10;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13666783	13666919	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:11;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13666920	13668760	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:11;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13668761	13668894	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:12;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13668895	13679345	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:12;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13679346	13679433	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:13;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13679434	13681860	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:13;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13681861	13682203	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:14;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13682204	13683748	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:14;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13683749	13683844	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:15;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13683845	13684926	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:15;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13684927	13685138	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:16;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13685139	13686296	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:16;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13686297	13686537	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:17;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13686538	13686883	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:17;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13686884	13687033	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:18;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13687034	13687803	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:18;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13687804	13687924	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:19;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13687925	13694480	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:19;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13694481	13694611	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:20;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13694612	13694798	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:20;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13694799	13695077	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:21;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13695078	13698683	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:21;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13698684	13698809	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:22;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13698810	13699775	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:22;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13699776	13699901	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:23;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13699902	13701308	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:23;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13701309	13701478	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:24;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13701479	13718457	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:24;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13718458	13718566	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:25;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13718567	13718950	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:25;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13718951	13719097	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:26;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13719098	13719913	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:26;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13719914	13720060	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:27;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13720061	13721108	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:27;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13721109	13721331	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:28;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13721332	13724402	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:28;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13724403	13724623	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:29;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13724624	13726698	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:29;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13726699	13726889	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:30;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13726890	13741963	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:30;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13741964	13742137	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:31;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13742138	13746186	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:31;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13746187	13746328	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:32;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13746329	13748139	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:32;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13748140	13748890	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:33;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13748891	13749285	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:33;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13749286	13749409	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:34;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13749410	13750498	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:34;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13750499	13750739	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:35;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13750740	13751337	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:35;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13751338	13751467	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:36;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13751468	13754606	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:36;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13754607	13754792	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:37;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13754793	13755206	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:37;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13755207	13755427	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:38;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13755428	13755512	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:38;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13755513	13755601	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:39;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13755602	13764613	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:39;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13764614	13764770	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:40;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13764771	13764906	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:40;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13764907	13765119	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:41;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13765120	13765839	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:41;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13765840	13765935	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:42;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13765936	13767552	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001230:42;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13767553	13769113	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=CHM13_chrY_T0001230;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001230;transcript_name=CHM13_chrY_T0001230;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001230:43;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13755319	13767886	100	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_G0000402;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=CHM13_chrY_T0001232;Name=USP9Y
CHM13_chrY	CAT	exon	13755319	13755427	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001232:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13755319	13755427	.	+	2	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001232:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13755428	13764613	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001232:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13764614	13764770	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001232:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13764614	13764770	.	+	1	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001232:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13764771	13764906	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001232:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13764907	13765119	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001232:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13764907	13765119	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001232:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13765120	13765839	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001232:2;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13765840	13765935	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001232:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13765840	13765935	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001232:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13765936	13767552	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001232:3;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13767553	13767886	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001232:4;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13767553	13767690	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=CDS:CHM13_chrY_T0001232:4;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	13767688	13767690	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=CHM13_chrY_T0001232;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001232;transcript_name=CHM13_chrY_T0001232;gene_name=USP9Y;ID=stop_codon:CHM13_chrY_T0001232;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13765087	13769113	1000	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=CHM13_chrY_T0001233;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_G0000402;transcript_name=CHM13_chrY_T0001233;gene_name=USP9Y;ID=CHM13_chrY_T0001233;Name=USP9Y
CHM13_chrY	CAT	exon	13765087	13765935	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=CHM13_chrY_T0001233;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001233;transcript_name=CHM13_chrY_T0001233;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001233:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13765936	13767552	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=CHM13_chrY_T0001233;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001233;transcript_name=CHM13_chrY_T0001233;gene_name=USP9Y;ID=intron:CHM13_chrY_T0001233:0;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13767553	13769113	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=CHM13_chrY_T0001233;gene_id=CHM13_chrY_G0000402;Parent=CHM13_chrY_T0001233;transcript_name=CHM13_chrY_T0001233;gene_name=USP9Y;ID=exon:CHM13_chrY_T0001233:1;Name=USP9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13445584	13452694	.	+	.	source_gene_common_name=SHROOM2P1;source_gene=ENSG00000226863.1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;gene_id=CHM13_chrY_G0000403;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=SHROOM2P1;gene_sources=liftoff;ID=CHM13_chrY_G0000403;Name=SHROOM2P1
CHM13_chrY	CAT	transcript	13445584	13452694	1000	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=CHM13_chrY_T0001218;gene_id=CHM13_chrY_G0000403;Parent=CHM13_chrY_G0000403;transcript_name=CHM13_chrY_T0001218;gene_name=SHROOM2P1;ID=CHM13_chrY_T0001218;Name=SHROOM2P1
CHM13_chrY	CAT	exon	13445584	13445712	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=CHM13_chrY_T0001218;gene_id=CHM13_chrY_G0000403;Parent=CHM13_chrY_T0001218;transcript_name=CHM13_chrY_T0001218;gene_name=SHROOM2P1;ID=exon:CHM13_chrY_T0001218:0;Name=SHROOM2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13445713	13448870	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=CHM13_chrY_T0001218;gene_id=CHM13_chrY_G0000403;Parent=CHM13_chrY_T0001218;transcript_name=CHM13_chrY_T0001218;gene_name=SHROOM2P1;ID=intron:CHM13_chrY_T0001218:0;Name=SHROOM2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13448871	13451025	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=CHM13_chrY_T0001218;gene_id=CHM13_chrY_G0000403;Parent=CHM13_chrY_T0001218;transcript_name=CHM13_chrY_T0001218;gene_name=SHROOM2P1;ID=exon:CHM13_chrY_T0001218:1;Name=SHROOM2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13451026	13452594	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=CHM13_chrY_T0001218;gene_id=CHM13_chrY_G0000403;Parent=CHM13_chrY_T0001218;transcript_name=CHM13_chrY_T0001218;gene_name=SHROOM2P1;ID=intron:CHM13_chrY_T0001218:1;Name=SHROOM2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13452595	13452694	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=CHM13_chrY_T0001218;gene_id=CHM13_chrY_G0000403;Parent=CHM13_chrY_T0001218;transcript_name=CHM13_chrY_T0001218;gene_name=SHROOM2P1;ID=exon:CHM13_chrY_T0001218:2;Name=SHROOM2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13526795	13542213	.	-	.	source_gene_common_name=MED14P1;source_gene=ENSG00000233774.1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;gene_id=CHM13_chrY_G0000404;gene_biotype=unprocessed_pseudogene;gene_name=MED14P1;gene_sources=liftoff;ID=CHM13_chrY_G0000404;Name=MED14P1
CHM13_chrY	CAT	transcript	13526795	13542213	1000	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=CHM13_chrY_T0001219;gene_id=CHM13_chrY_G0000404;Parent=CHM13_chrY_G0000404;transcript_name=CHM13_chrY_T0001219;gene_name=MED14P1;ID=CHM13_chrY_T0001219;Name=MED14P1
CHM13_chrY	CAT	exon	13526795	13526935	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=CHM13_chrY_T0001219;gene_id=CHM13_chrY_G0000404;Parent=CHM13_chrY_T0001219;transcript_name=CHM13_chrY_T0001219;gene_name=MED14P1;ID=exon:CHM13_chrY_T0001219:0;Name=MED14P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13526936	13527437	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=CHM13_chrY_T0001219;gene_id=CHM13_chrY_G0000404;Parent=CHM13_chrY_T0001219;transcript_name=CHM13_chrY_T0001219;gene_name=MED14P1;ID=intron:CHM13_chrY_T0001219:0;Name=MED14P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13527438	13527545	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=CHM13_chrY_T0001219;gene_id=CHM13_chrY_G0000404;Parent=CHM13_chrY_T0001219;transcript_name=CHM13_chrY_T0001219;gene_name=MED14P1;ID=exon:CHM13_chrY_T0001219:1;Name=MED14P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13527546	13527841	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=CHM13_chrY_T0001219;gene_id=CHM13_chrY_G0000404;Parent=CHM13_chrY_T0001219;transcript_name=CHM13_chrY_T0001219;gene_name=MED14P1;ID=intron:CHM13_chrY_T0001219:1;Name=MED14P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13527842	13527977	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=CHM13_chrY_T0001219;gene_id=CHM13_chrY_G0000404;Parent=CHM13_chrY_T0001219;transcript_name=CHM13_chrY_T0001219;gene_name=MED14P1;ID=exon:CHM13_chrY_T0001219:2;Name=MED14P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13527978	13540540	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=CHM13_chrY_T0001219;gene_id=CHM13_chrY_G0000404;Parent=CHM13_chrY_T0001219;transcript_name=CHM13_chrY_T0001219;gene_name=MED14P1;ID=intron:CHM13_chrY_T0001219:2;Name=MED14P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13540541	13540685	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=CHM13_chrY_T0001219;gene_id=CHM13_chrY_G0000404;Parent=CHM13_chrY_T0001219;transcript_name=CHM13_chrY_T0001219;gene_name=MED14P1;ID=exon:CHM13_chrY_T0001219:3;Name=MED14P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13540686	13542095	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=CHM13_chrY_T0001219;gene_id=CHM13_chrY_G0000404;Parent=CHM13_chrY_T0001219;transcript_name=CHM13_chrY_T0001219;gene_name=MED14P1;ID=intron:CHM13_chrY_T0001219:3;Name=MED14P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13542096	13542213	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=CHM13_chrY_T0001219;gene_id=CHM13_chrY_G0000404;Parent=CHM13_chrY_T0001219;transcript_name=CHM13_chrY_T0001219;gene_name=MED14P1;ID=exon:CHM13_chrY_T0001219:4;Name=MED14P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13569585	13571815	.	-	.	source_gene_common_name=ENSG00000286009;source_gene=ENSG00000286009.3;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;gene_id=CHM13_chrY_G0000405;gene_biotype=lncRNA;gene_name=ENSG00000286009;gene_sources=liftoff;ID=CHM13_chrY_G0000405;Name=ENSG00000286009
CHM13_chrY	CAT	transcript	13569585	13571810	1000	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=CHM13_chrY_T0001220;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_G0000405;transcript_name=CHM13_chrY_T0001220;gene_name=ENSG00000286009;ID=CHM13_chrY_T0001220;Name=ENSG00000286009
CHM13_chrY	CAT	exon	13569585	13570397	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=CHM13_chrY_T0001220;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001220;transcript_name=CHM13_chrY_T0001220;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001220:0;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13570398	13570800	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=CHM13_chrY_T0001220;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001220;transcript_name=CHM13_chrY_T0001220;gene_name=ENSG00000286009;ID=intron:CHM13_chrY_T0001220:0;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13570801	13571026	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=CHM13_chrY_T0001220;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001220;transcript_name=CHM13_chrY_T0001220;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001220:1;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13571027	13571635	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=CHM13_chrY_T0001220;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001220;transcript_name=CHM13_chrY_T0001220;gene_name=ENSG00000286009;ID=intron:CHM13_chrY_T0001220:1;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13571636	13571810	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=CHM13_chrY_T0001220;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001220;transcript_name=CHM13_chrY_T0001220;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001220:2;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13569588	13571781	1000	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=CHM13_chrY_T0001221;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_G0000405;transcript_name=CHM13_chrY_T0001221;gene_name=ENSG00000286009;ID=CHM13_chrY_T0001221;Name=ENSG00000286009
CHM13_chrY	CAT	exon	13569588	13570400	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=CHM13_chrY_T0001221;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001221;transcript_name=CHM13_chrY_T0001221;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001221:0;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13570401	13570800	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=CHM13_chrY_T0001221;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001221;transcript_name=CHM13_chrY_T0001221;gene_name=ENSG00000286009;ID=intron:CHM13_chrY_T0001221:0;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13570801	13571026	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=CHM13_chrY_T0001221;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001221;transcript_name=CHM13_chrY_T0001221;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001221:1;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13571027	13571578	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=CHM13_chrY_T0001221;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001221;transcript_name=CHM13_chrY_T0001221;gene_name=ENSG00000286009;ID=intron:CHM13_chrY_T0001221:1;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13571579	13571781	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=CHM13_chrY_T0001221;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001221;transcript_name=CHM13_chrY_T0001221;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001221:2;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13569591	13571749	1000	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=CHM13_chrY_T0001222;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_G0000405;transcript_name=CHM13_chrY_T0001222;gene_name=ENSG00000286009;ID=CHM13_chrY_T0001222;Name=ENSG00000286009
CHM13_chrY	CAT	exon	13569591	13570400	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=CHM13_chrY_T0001222;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001222;transcript_name=CHM13_chrY_T0001222;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001222:0;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13570401	13570931	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=CHM13_chrY_T0001222;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001222;transcript_name=CHM13_chrY_T0001222;gene_name=ENSG00000286009;ID=intron:CHM13_chrY_T0001222:0;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13570932	13571026	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=CHM13_chrY_T0001222;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001222;transcript_name=CHM13_chrY_T0001222;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001222:1;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13571027	13571578	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=CHM13_chrY_T0001222;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001222;transcript_name=CHM13_chrY_T0001222;gene_name=ENSG00000286009;ID=intron:CHM13_chrY_T0001222:1;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13571579	13571749	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=CHM13_chrY_T0001222;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001222;transcript_name=CHM13_chrY_T0001222;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001222:2;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13569591	13571753	1000	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=CHM13_chrY_T0001223;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_G0000405;transcript_name=CHM13_chrY_T0001223;gene_name=ENSG00000286009;ID=CHM13_chrY_T0001223;Name=ENSG00000286009
CHM13_chrY	CAT	exon	13569591	13570400	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=CHM13_chrY_T0001223;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001223;transcript_name=CHM13_chrY_T0001223;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001223:0;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13570401	13570931	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=CHM13_chrY_T0001223;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001223;transcript_name=CHM13_chrY_T0001223;gene_name=ENSG00000286009;ID=intron:CHM13_chrY_T0001223:0;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13570932	13571026	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=CHM13_chrY_T0001223;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001223;transcript_name=CHM13_chrY_T0001223;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001223:1;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13571027	13571635	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=CHM13_chrY_T0001223;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001223;transcript_name=CHM13_chrY_T0001223;gene_name=ENSG00000286009;ID=intron:CHM13_chrY_T0001223:1;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13571636	13571753	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=CHM13_chrY_T0001223;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001223;transcript_name=CHM13_chrY_T0001223;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001223:2;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13569591	13571815	1000	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=CHM13_chrY_T0001224;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_G0000405;transcript_name=CHM13_chrY_T0001224;gene_name=ENSG00000286009;ID=CHM13_chrY_T0001224;Name=ENSG00000286009
CHM13_chrY	CAT	exon	13569591	13570400	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=CHM13_chrY_T0001224;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001224;transcript_name=CHM13_chrY_T0001224;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001224:0;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13570401	13570800	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=CHM13_chrY_T0001224;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001224;transcript_name=CHM13_chrY_T0001224;gene_name=ENSG00000286009;ID=intron:CHM13_chrY_T0001224:0;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13570801	13571026	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=CHM13_chrY_T0001224;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001224;transcript_name=CHM13_chrY_T0001224;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001224:1;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13571027	13571635	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=CHM13_chrY_T0001224;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001224;transcript_name=CHM13_chrY_T0001224;gene_name=ENSG00000286009;ID=intron:CHM13_chrY_T0001224:1;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13571636	13571815	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=CHM13_chrY_T0001224;gene_id=CHM13_chrY_G0000405;Parent=CHM13_chrY_T0001224;transcript_name=CHM13_chrY_T0001224;gene_name=ENSG00000286009;ID=exon:CHM13_chrY_T0001224:2;Name=ENSG00000286009;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13710250	13712107	.	-	.	source_gene_common_name=CDY4P;source_gene=ENSG00000228411.1;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;gene_id=CHM13_chrY_G0000406;gene_biotype=processed_pseudogene;gene_name=CDY4P;gene_sources=liftoff;ID=CHM13_chrY_G0000406;Name=CDY4P
CHM13_chrY	CAT	transcript	13710250	13712107	1000	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=CHM13_chrY_T0001231;gene_id=CHM13_chrY_G0000406;Parent=CHM13_chrY_G0000406;transcript_name=CHM13_chrY_T0001231;gene_name=CDY4P;ID=CHM13_chrY_T0001231;Name=CDY4P
CHM13_chrY	CAT	exon	13710250	13710993	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=CHM13_chrY_T0001231;gene_id=CHM13_chrY_G0000406;Parent=CHM13_chrY_T0001231;transcript_name=CHM13_chrY_T0001231;gene_name=CDY4P;ID=exon:CHM13_chrY_T0001231:0;Name=CDY4P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13710994	13711338	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=CHM13_chrY_T0001231;gene_id=CHM13_chrY_G0000406;Parent=CHM13_chrY_T0001231;transcript_name=CHM13_chrY_T0001231;gene_name=CDY4P;ID=intron:CHM13_chrY_T0001231:0;Name=CDY4P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13711339	13712107	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=CHM13_chrY_T0001231;gene_id=CHM13_chrY_G0000406;Parent=CHM13_chrY_T0001231;transcript_name=CHM13_chrY_T0001231;gene_name=CDY4P;ID=exon:CHM13_chrY_T0001231:1;Name=CDY4P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13812379	13828749	.	+	.	source_gene_common_name=DDX3Y;source_gene=ENSG00000067048.17;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;gene_id=CHM13_chrY_G0000407;gene_biotype=protein_coding;gene_name=DDX3Y;gene_sources=liftoff;ID=CHM13_chrY_G0000407;Name=DDX3Y
CHM13_chrY	CAT	transcript	13812379	13826810	100	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_G0000407;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CHM13_chrY_T0001234;Name=DDX3Y
CHM13_chrY	CAT	exon	13812379	13812685	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13812686	13813205	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13813206	13813252	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13813208	13813252	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	13813208	13813210	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=start_codon:CHM13_chrY_T0001234;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13813253	13815807	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13815808	13815865	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13815808	13815865	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13815866	13817630	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13817631	13817678	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:3;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13817631	13817678	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13817679	13820109	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:3;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13820110	13820239	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:4;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13820110	13820239	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:3;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13820240	13820997	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:4;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13820998	13821153	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:5;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13820998	13821153	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:4;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13821154	13821233	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:5;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13821234	13821333	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:6;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13821234	13821333	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:5;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13821334	13821988	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:6;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13821989	13822124	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:7;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13821989	13822124	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:6;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13822125	13822834	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:7;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13822835	13822920	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:8;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13822835	13822920	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:7;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13822921	13823154	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:8;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13823155	13823253	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:9;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13823155	13823253	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:8;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13823254	13823337	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:9;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13823338	13823498	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:10;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13823338	13823498	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:9;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13823499	13823900	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:10;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13823901	13824045	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:11;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13823901	13824045	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:10;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13824046	13824153	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:11;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13824154	13824298	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:12;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13824154	13824298	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:11;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13824299	13824531	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:12;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13824532	13824713	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:13;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13824532	13824713	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:12;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13824714	13824787	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:13;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13824788	13824905	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:14;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13824788	13824905	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:13;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13824906	13825177	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:14;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13825178	13825331	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:15;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13825178	13825331	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:14;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13825332	13825673	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:15;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13825674	13825813	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:16;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13825674	13825813	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:15;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13825814	13826313	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001234:16;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13826314	13826810	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001234:17;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13826314	13826393	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001234:16;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	13826391	13826393	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=CHM13_chrY_T0001234;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001234;transcript_name=CHM13_chrY_T0001234;gene_name=DDX3Y;ID=stop_codon:CHM13_chrY_T0001234;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13812389	13822124	100	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_G0000407;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=CHM13_chrY_T0001235;Name=DDX3Y
CHM13_chrY	CAT	exon	13812389	13812685	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001235:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13812686	13813128	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001235:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13813129	13813252	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001235:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13813208	13813252	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001235:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	13813208	13813210	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=start_codon:CHM13_chrY_T0001235;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13813253	13815807	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001235:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13815808	13815865	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001235:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13815808	13815865	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001235:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13815866	13817630	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001235:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13817631	13817678	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001235:3;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13817631	13817678	.	+	2	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001235:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13817679	13820109	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001235:3;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13820110	13820239	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001235:4;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13820110	13820239	.	+	2	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001235:3;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13820240	13820997	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001235:4;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13820998	13821153	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001235:5;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13820998	13821153	.	+	1	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001235:4;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13821154	13821233	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001235:5;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13821234	13821333	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001235:6;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13821234	13821333	.	+	1	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001235:5;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13821334	13821988	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001235:6;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13821989	13822124	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001235:7;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13821989	13822124	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=CHM13_chrY_T0001235;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001235;transcript_name=CHM13_chrY_T0001235;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001235:6;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13813120	13817967	1000	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=CHM13_chrY_T0001236;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_G0000407;transcript_name=CHM13_chrY_T0001236;gene_name=DDX3Y;ID=CHM13_chrY_T0001236;Name=DDX3Y
CHM13_chrY	CAT	exon	13813120	13813252	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=CHM13_chrY_T0001236;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001236;transcript_name=CHM13_chrY_T0001236;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001236:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13813253	13815807	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=CHM13_chrY_T0001236;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001236;transcript_name=CHM13_chrY_T0001236;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001236:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13815808	13815865	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=CHM13_chrY_T0001236;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001236;transcript_name=CHM13_chrY_T0001236;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001236:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13815866	13817630	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=CHM13_chrY_T0001236;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001236;transcript_name=CHM13_chrY_T0001236;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001236:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13817631	13817967	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=CHM13_chrY_T0001236;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001236;transcript_name=CHM13_chrY_T0001236;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001236:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13813139	13828749	100	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_G0000407;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CHM13_chrY_T0001237;Name=DDX3Y
CHM13_chrY	CAT	exon	13813139	13813252	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13813208	13813252	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	13813208	13813210	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=start_codon:CHM13_chrY_T0001237;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13813253	13815807	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13815808	13815865	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13815808	13815865	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13815866	13817630	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13817631	13817678	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13817631	13817678	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13817679	13820109	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13820110	13820239	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:3;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13820110	13820239	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:3;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13820240	13820997	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:3;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13820998	13821153	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:4;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13820998	13821153	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:4;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13821154	13821233	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:4;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13821234	13821333	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:5;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13821234	13821333	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:5;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13821334	13821988	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:5;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13821989	13822124	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:6;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13821989	13822124	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:6;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13822125	13822834	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:6;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13822835	13822920	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:7;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13822835	13822920	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:7;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13822921	13823154	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:7;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13823155	13823253	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:8;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13823155	13823253	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:8;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13823254	13823337	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:8;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13823338	13823498	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:9;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13823338	13823498	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:9;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13823499	13823900	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:9;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13823901	13824045	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:10;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13823901	13824045	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:10;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13824046	13824153	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:10;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13824154	13824298	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:11;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13824154	13824298	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:11;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13824299	13824531	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:11;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13824532	13824713	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:12;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13824532	13824713	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:12;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13824714	13824787	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:12;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13824788	13824905	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:13;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13824788	13824905	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:13;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13824906	13825177	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:13;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13825178	13825331	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:14;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13825178	13825331	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:14;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13825332	13825673	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:14;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13825674	13825813	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:15;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13825674	13825813	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:15;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13825814	13826313	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001237:15;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13826314	13828749	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001237:16;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13826314	13826393	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001237:16;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	13826391	13826393	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=CHM13_chrY_T0001237;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001237;transcript_name=CHM13_chrY_T0001237;gene_name=DDX3Y;ID=stop_codon:CHM13_chrY_T0001237;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13814009	13822920	100	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_G0000407;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=CHM13_chrY_T0001238;Name=DDX3Y
CHM13_chrY	CAT	exon	13814009	13814086	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001238:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13814051	13814086	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001238:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	13814051	13814053	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=start_codon:CHM13_chrY_T0001238;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13814087	13815807	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001238:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13815808	13815865	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001238:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13815808	13815865	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001238:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13815866	13817630	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001238:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13817631	13817678	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001238:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13817631	13817678	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001238:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13817679	13820109	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001238:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13820110	13820239	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001238:3;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13820110	13820239	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001238:3;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13820240	13820997	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001238:3;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13820998	13821153	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001238:4;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13820998	13821153	.	+	1	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001238:4;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13821154	13821233	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001238:4;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13821234	13821333	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001238:5;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13821234	13821333	.	+	1	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001238:5;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13821334	13821988	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001238:5;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13821989	13822124	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001238:6;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13821989	13822124	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001238:6;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13822125	13822834	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001238:6;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13822835	13822920	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001238:7;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	13822835	13822920	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=CHM13_chrY_T0001238;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001238;transcript_name=CHM13_chrY_T0001238;gene_name=DDX3Y;ID=CDS:CHM13_chrY_T0001238:7;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13820911	13822072	1000	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=CHM13_chrY_T0001239;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_G0000407;transcript_name=CHM13_chrY_T0001239;gene_name=DDX3Y;ID=CHM13_chrY_T0001239;Name=DDX3Y
CHM13_chrY	CAT	exon	13820911	13821333	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=CHM13_chrY_T0001239;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001239;transcript_name=CHM13_chrY_T0001239;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001239:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13821334	13821988	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=CHM13_chrY_T0001239;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001239;transcript_name=CHM13_chrY_T0001239;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001239:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13821989	13822072	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=CHM13_chrY_T0001239;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001239;transcript_name=CHM13_chrY_T0001239;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001239:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13821234	13823170	1000	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=CHM13_chrY_T0001240;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_G0000407;transcript_name=CHM13_chrY_T0001240;gene_name=DDX3Y;ID=CHM13_chrY_T0001240;Name=DDX3Y
CHM13_chrY	CAT	exon	13821234	13821333	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=CHM13_chrY_T0001240;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001240;transcript_name=CHM13_chrY_T0001240;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001240:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13821334	13821988	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=CHM13_chrY_T0001240;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001240;transcript_name=CHM13_chrY_T0001240;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001240:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13821989	13822124	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=CHM13_chrY_T0001240;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001240;transcript_name=CHM13_chrY_T0001240;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001240:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13822125	13822834	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=CHM13_chrY_T0001240;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001240;transcript_name=CHM13_chrY_T0001240;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001240:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13822835	13823170	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=CHM13_chrY_T0001240;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001240;transcript_name=CHM13_chrY_T0001240;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001240:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13821279	13823498	1000	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=CHM13_chrY_T0001241;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_G0000407;transcript_name=CHM13_chrY_T0001241;gene_name=DDX3Y;ID=CHM13_chrY_T0001241;Name=DDX3Y
CHM13_chrY	CAT	exon	13821279	13821333	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=CHM13_chrY_T0001241;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001241;transcript_name=CHM13_chrY_T0001241;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001241:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13821334	13821988	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=CHM13_chrY_T0001241;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001241;transcript_name=CHM13_chrY_T0001241;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001241:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13821989	13822124	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=CHM13_chrY_T0001241;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001241;transcript_name=CHM13_chrY_T0001241;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001241:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13822125	13822834	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=CHM13_chrY_T0001241;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001241;transcript_name=CHM13_chrY_T0001241;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001241:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13822835	13822920	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=CHM13_chrY_T0001241;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001241;transcript_name=CHM13_chrY_T0001241;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001241:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13822921	13823154	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=CHM13_chrY_T0001241;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001241;transcript_name=CHM13_chrY_T0001241;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001241:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13823155	13823498	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=CHM13_chrY_T0001241;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001241;transcript_name=CHM13_chrY_T0001241;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001241:3;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	13823767	13824624	1000	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=CHM13_chrY_T0001242;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_G0000407;transcript_name=CHM13_chrY_T0001242;gene_name=DDX3Y;ID=CHM13_chrY_T0001242;Name=DDX3Y
CHM13_chrY	CAT	exon	13823767	13824045	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=CHM13_chrY_T0001242;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001242;transcript_name=CHM13_chrY_T0001242;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001242:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13824046	13824153	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=CHM13_chrY_T0001242;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001242;transcript_name=CHM13_chrY_T0001242;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001242:0;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13824154	13824298	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=CHM13_chrY_T0001242;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001242;transcript_name=CHM13_chrY_T0001242;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001242:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13824299	13824531	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=CHM13_chrY_T0001242;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001242;transcript_name=CHM13_chrY_T0001242;gene_name=DDX3Y;ID=intron:CHM13_chrY_T0001242:1;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13824532	13824624	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=CHM13_chrY_T0001242;gene_id=CHM13_chrY_G0000407;Parent=CHM13_chrY_T0001242;transcript_name=CHM13_chrY_T0001242;gene_name=DDX3Y;ID=exon:CHM13_chrY_T0001242:2;Name=DDX3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13838436	13856452	.	-	.	source_gene_common_name=CASKP1;source_gene=ENSG00000234059.1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;gene_id=CHM13_chrY_G0000408;gene_biotype=unprocessed_pseudogene;gene_name=CASKP1;gene_sources=liftoff;ID=CHM13_chrY_G0000408;Name=CASKP1
CHM13_chrY	CAT	transcript	13838436	13856452	1000	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_G0000408;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=CHM13_chrY_T0001243;Name=CASKP1
CHM13_chrY	CAT	exon	13838436	13838598	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=exon:CHM13_chrY_T0001243:0;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13838599	13843472	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=intron:CHM13_chrY_T0001243:0;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13843473	13843557	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=exon:CHM13_chrY_T0001243:1;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13843558	13853889	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=intron:CHM13_chrY_T0001243:1;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13853890	13853933	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=exon:CHM13_chrY_T0001243:2;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13853934	13854158	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=intron:CHM13_chrY_T0001243:2;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13854159	13854193	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=exon:CHM13_chrY_T0001243:3;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13854194	13854294	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=intron:CHM13_chrY_T0001243:3;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13854295	13854342	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=exon:CHM13_chrY_T0001243:4;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13854343	13854557	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=intron:CHM13_chrY_T0001243:4;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13854558	13854577	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=exon:CHM13_chrY_T0001243:5;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13854578	13855944	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=intron:CHM13_chrY_T0001243:5;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13855945	13856048	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=exon:CHM13_chrY_T0001243:6;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13856049	13856369	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=intron:CHM13_chrY_T0001243:6;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	13856370	13856452	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=CHM13_chrY_T0001243;gene_id=CHM13_chrY_G0000408;Parent=CHM13_chrY_T0001243;transcript_name=CHM13_chrY_T0001243;gene_name=CASKP1;ID=exon:CHM13_chrY_T0001243:7;Name=CASKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	13992062	14004077	.	+	.	source_gene_common_name=SFPQP1;source_gene=ENSG00000224035.1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;gene_id=CHM13_chrY_G0000409;gene_biotype=processed_pseudogene;gene_name=SFPQP1;gene_sources=liftoff;ID=CHM13_chrY_G0000409;Name=SFPQP1
CHM13_chrY	CAT	transcript	13992062	14004077	1000	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=CHM13_chrY_T0001244;gene_id=CHM13_chrY_G0000409;Parent=CHM13_chrY_G0000409;transcript_name=CHM13_chrY_T0001244;gene_name=SFPQP1;ID=CHM13_chrY_T0001244;Name=SFPQP1
CHM13_chrY	CAT	exon	13992062	13992616	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=CHM13_chrY_T0001244;gene_id=CHM13_chrY_G0000409;Parent=CHM13_chrY_T0001244;transcript_name=CHM13_chrY_T0001244;gene_name=SFPQP1;ID=exon:CHM13_chrY_T0001244:0;Name=SFPQP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	13992617	14002846	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=CHM13_chrY_T0001244;gene_id=CHM13_chrY_G0000409;Parent=CHM13_chrY_T0001244;transcript_name=CHM13_chrY_T0001244;gene_name=SFPQP1;ID=intron:CHM13_chrY_T0001244:0;Name=SFPQP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14002847	14004077	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=CHM13_chrY_T0001244;gene_id=CHM13_chrY_G0000409;Parent=CHM13_chrY_T0001244;transcript_name=CHM13_chrY_T0001244;gene_name=SFPQP1;ID=exon:CHM13_chrY_T0001244:1;Name=SFPQP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	14060635	14068918	.	-	.	source_gene_common_name=TAB3P1;source_gene=ENSG00000235462.2;gene_id=CHM13_chrY_G0000410;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TAB3P1;gene_sources=liftoff;ID=CHM13_chrY_G0000410;Name=TAB3P1
CHM13_chrY	CAT	transcript	14060635	14068918	1000	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=CHM13_chrY_T0001245;gene_id=CHM13_chrY_G0000410;Parent=CHM13_chrY_G0000410;transcript_name=CHM13_chrY_T0001245;gene_name=TAB3P1;ID=CHM13_chrY_T0001245;Name=TAB3P1
CHM13_chrY	CAT	exon	14060635	14060728	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=CHM13_chrY_T0001245;gene_id=CHM13_chrY_G0000410;Parent=CHM13_chrY_T0001245;transcript_name=CHM13_chrY_T0001245;gene_name=TAB3P1;ID=exon:CHM13_chrY_T0001245:0;Name=TAB3P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14060729	14066659	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=CHM13_chrY_T0001245;gene_id=CHM13_chrY_G0000410;Parent=CHM13_chrY_T0001245;transcript_name=CHM13_chrY_T0001245;gene_name=TAB3P1;ID=intron:CHM13_chrY_T0001245:0;Name=TAB3P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14066660	14066820	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=CHM13_chrY_T0001245;gene_id=CHM13_chrY_G0000410;Parent=CHM13_chrY_T0001245;transcript_name=CHM13_chrY_T0001245;gene_name=TAB3P1;ID=exon:CHM13_chrY_T0001245:1;Name=TAB3P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14066821	14067539	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=CHM13_chrY_T0001245;gene_id=CHM13_chrY_G0000410;Parent=CHM13_chrY_T0001245;transcript_name=CHM13_chrY_T0001245;gene_name=TAB3P1;ID=intron:CHM13_chrY_T0001245:1;Name=TAB3P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14067540	14068918	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=CHM13_chrY_T0001245;gene_id=CHM13_chrY_G0000410;Parent=CHM13_chrY_T0001245;transcript_name=CHM13_chrY_T0001245;gene_name=TAB3P1;ID=exon:CHM13_chrY_T0001245:2;Name=TAB3P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	14065977	14068253	.	-	.	source_gene_common_name=ENSG00000290852;source_gene=ENSG00000290852.1;gene_id=CHM13_chrY_G0000411;gene_biotype=lncRNA;gene_name=ENSG00000290852;gene_sources=liftoff;ID=CHM13_chrY_G0000411;Name=ENSG00000290852
CHM13_chrY	CAT	transcript	14065977	14068253	1000	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=CHM13_chrY_T0001246;gene_id=CHM13_chrY_G0000411;Parent=CHM13_chrY_G0000411;transcript_name=CHM13_chrY_T0001246;gene_name=ENSG00000290852;ID=CHM13_chrY_T0001246;Name=ENSG00000290852
CHM13_chrY	CAT	exon	14065977	14066173	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=CHM13_chrY_T0001246;gene_id=CHM13_chrY_G0000411;Parent=CHM13_chrY_T0001246;transcript_name=CHM13_chrY_T0001246;gene_name=ENSG00000290852;ID=exon:CHM13_chrY_T0001246:0;Name=ENSG00000290852;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14066174	14067597	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=CHM13_chrY_T0001246;gene_id=CHM13_chrY_G0000411;Parent=CHM13_chrY_T0001246;transcript_name=CHM13_chrY_T0001246;gene_name=ENSG00000290852;ID=intron:CHM13_chrY_T0001246:0;Name=ENSG00000290852;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14067598	14068253	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=CHM13_chrY_T0001246;gene_id=CHM13_chrY_G0000411;Parent=CHM13_chrY_T0001246;transcript_name=CHM13_chrY_T0001246;gene_name=ENSG00000290852;ID=exon:CHM13_chrY_T0001246:1;Name=ENSG00000290852;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	14137590	14138145	.	+	.	source_gene_common_name=DPPA2P1;source_gene=ENSG00000223915.1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;gene_id=CHM13_chrY_G0000412;gene_biotype=processed_pseudogene;gene_name=DPPA2P1;gene_sources=liftoff;ID=CHM13_chrY_G0000412;Name=DPPA2P1
CHM13_chrY	CAT	transcript	14137590	14138145	1000	+	.	source_transcript=ENST00000428060.1;source_transcript_name=DPPA2P1-201;source_gene=ENSG00000223915.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223915.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428060.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPPA2P1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;transcript_id=CHM13_chrY_T0001247;gene_id=CHM13_chrY_G0000412;Parent=CHM13_chrY_G0000412;transcript_name=CHM13_chrY_T0001247;gene_name=DPPA2P1;ID=CHM13_chrY_T0001247;Name=DPPA2P1
CHM13_chrY	CAT	exon	14137590	14138145	.	+	.	source_transcript=ENST00000428060.1;source_transcript_name=DPPA2P1-201;source_gene=ENSG00000223915.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223915.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428060.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPPA2P1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;transcript_id=CHM13_chrY_T0001247;gene_id=CHM13_chrY_G0000412;Parent=CHM13_chrY_T0001247;transcript_name=CHM13_chrY_T0001247;gene_name=DPPA2P1;ID=exon:CHM13_chrY_T0001247:0;Name=DPPA2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	14141283	14387362	.	-	.	source_gene_common_name=UTY;source_gene=ENSG00000183878.16;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;gene_id=CHM13_chrY_G0000413;gene_biotype=protein_coding;gene_name=UTY;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000413;Name=UTY
CHM13_chrY	CAT	transcript	14141283	14386658	1000	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CHM13_chrY_T0001248;Name=UTY
CHM13_chrY	CAT	exon	14141283	14141532	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14141283	14141532	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14141533	14157721	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14157722	14157892	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14157722	14157892	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14157893	14166982	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14266470	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=intron:CHM13_chrY_T0001248:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386658	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=exon:CHM13_chrY_T0001248:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=CDS:CHM13_chrY_T0001248:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=CHM13_chrY_T0001248;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001248;transcript_name=CHM13_chrY_T0001248;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001248;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14141286	14266491	1000	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CHM13_chrY_T0001249;Name=UTY
CHM13_chrY	CAT	exon	14141286	14141532	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14141286	14141532	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14141533	14157721	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14157722	14157892	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14157722	14157892	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14157893	14166982	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14265167	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14265168	14265323	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14265168	14265323	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14265324	14265791	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14265792	14265926	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14265792	14265926	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14265927	14266470	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=intron:CHM13_chrY_T0001249:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266491	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=exon:CHM13_chrY_T0001249:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266491	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=CHM13_chrY_T0001249;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001249;transcript_name=CHM13_chrY_T0001249;gene_name=UTY;ID=CDS:CHM13_chrY_T0001249:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14141287	14152071	1000	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=CHM13_chrY_T0001250;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001250;gene_name=UTY;ID=CHM13_chrY_T0001250;Name=UTY
CHM13_chrY	CAT	exon	14141287	14141532	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=CHM13_chrY_T0001250;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001250;transcript_name=CHM13_chrY_T0001250;gene_name=UTY;ID=exon:CHM13_chrY_T0001250:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14141533	14151919	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=CHM13_chrY_T0001250;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001250;transcript_name=CHM13_chrY_T0001250;gene_name=UTY;ID=intron:CHM13_chrY_T0001250:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14151920	14152071	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=CHM13_chrY_T0001250;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001250;transcript_name=CHM13_chrY_T0001250;gene_name=UTY;ID=exon:CHM13_chrY_T0001250:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14141305	14386691	1000	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CHM13_chrY_T0001251;Name=UTY
CHM13_chrY	CAT	exon	14141305	14141532	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14141533	14157721	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14157722	14157892	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14157893	14166982	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212955	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14240921	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14240922	14241044	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14240924	14241044	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14240924	14240926	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001251;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14241045	14242266	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14266470	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=intron:CHM13_chrY_T0001251:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386691	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=exon:CHM13_chrY_T0001251:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=CDS:CHM13_chrY_T0001251:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=CHM13_chrY_T0001251;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001251;transcript_name=CHM13_chrY_T0001251;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001251;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14141305	14242833	1000	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=CHM13_chrY_T0001252;Name=UTY
CHM13_chrY	CAT	exon	14141305	14141532	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=exon:CHM13_chrY_T0001252:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14141305	14141532	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=CDS:CHM13_chrY_T0001252:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14141533	14166982	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=intron:CHM13_chrY_T0001252:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=exon:CHM13_chrY_T0001252:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=CDS:CHM13_chrY_T0001252:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=intron:CHM13_chrY_T0001252:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=exon:CHM13_chrY_T0001252:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=CDS:CHM13_chrY_T0001252:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=intron:CHM13_chrY_T0001252:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=exon:CHM13_chrY_T0001252:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=CDS:CHM13_chrY_T0001252:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=intron:CHM13_chrY_T0001252:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=exon:CHM13_chrY_T0001252:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=CDS:CHM13_chrY_T0001252:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=intron:CHM13_chrY_T0001252:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=exon:CHM13_chrY_T0001252:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=CDS:CHM13_chrY_T0001252:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=intron:CHM13_chrY_T0001252:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=exon:CHM13_chrY_T0001252:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=CDS:CHM13_chrY_T0001252:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=intron:CHM13_chrY_T0001252:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=exon:CHM13_chrY_T0001252:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=CDS:CHM13_chrY_T0001252:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=intron:CHM13_chrY_T0001252:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=exon:CHM13_chrY_T0001252:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=CDS:CHM13_chrY_T0001252:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=intron:CHM13_chrY_T0001252:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=exon:CHM13_chrY_T0001252:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=CDS:CHM13_chrY_T0001252:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=intron:CHM13_chrY_T0001252:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=exon:CHM13_chrY_T0001252:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=CDS:CHM13_chrY_T0001252:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=intron:CHM13_chrY_T0001252:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14242833	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=exon:CHM13_chrY_T0001252:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14242833	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=CHM13_chrY_T0001252;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001252;transcript_name=CHM13_chrY_T0001252;gene_name=UTY;ID=CDS:CHM13_chrY_T0001252:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14141305	14386691	1000	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CHM13_chrY_T0001253;Name=UTY
CHM13_chrY	CAT	exon	14141305	14141532	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14141533	14157721	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14157722	14157892	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14157893	14166982	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14240921	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14240922	14241044	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14240924	14241044	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14240924	14240926	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001253;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14241045	14242266	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14266470	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=intron:CHM13_chrY_T0001253:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386691	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=exon:CHM13_chrY_T0001253:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=CDS:CHM13_chrY_T0001253:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=CHM13_chrY_T0001253;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001253;transcript_name=CHM13_chrY_T0001253;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001253;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14155084	14387362	100	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CHM13_chrY_T0001254;Name=UTY
CHM13_chrY	CAT	exon	14155084	14156587	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14156561	14156587	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14156561	14156563	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001254;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14156588	14157721	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14157722	14157892	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14157722	14157892	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14157893	14166982	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14266470	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=intron:CHM13_chrY_T0001254:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14387362	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=exon:CHM13_chrY_T0001254:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=CDS:CHM13_chrY_T0001254:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=CHM13_chrY_T0001254;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001254;transcript_name=CHM13_chrY_T0001254;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001254;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14155090	14386722	100	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CHM13_chrY_T0001255;Name=UTY
CHM13_chrY	CAT	exon	14155090	14156587	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14156561	14156587	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14156561	14156563	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001255;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14156588	14157721	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14157722	14157892	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14157722	14157892	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14157893	14166982	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14265167	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14265168	14265323	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14265168	14265323	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14265324	14265791	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14265792	14265926	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14265792	14265926	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14265927	14266470	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=intron:CHM13_chrY_T0001255:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386722	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=exon:CHM13_chrY_T0001255:29;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=CDS:CHM13_chrY_T0001255:29;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=CHM13_chrY_T0001255;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001255;transcript_name=CHM13_chrY_T0001255;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001255;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14155847	14386680	100	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CHM13_chrY_T0001256;Name=UTY
CHM13_chrY	CAT	exon	14155847	14156517	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14156491	14156517	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14156491	14156493	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001256;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14156518	14157721	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14157722	14157892	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14157722	14157892	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14157893	14166982	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14265167	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14265168	14265257	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14265168	14265257	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14265258	14265791	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14265792	14265926	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14265792	14265926	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14265927	14266470	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=intron:CHM13_chrY_T0001256:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386680	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=exon:CHM13_chrY_T0001256:29;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=CDS:CHM13_chrY_T0001256:29;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=CHM13_chrY_T0001256;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001256;transcript_name=CHM13_chrY_T0001256;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001256;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14156561	14386354	100	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CHM13_chrY_T0001257;Name=UTY
CHM13_chrY	CAT	exon	14156561	14156587	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14156561	14156587	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14156561	14156563	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001257;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14156588	14166982	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14265791	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14265792	14265926	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14265792	14265926	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14265927	14266470	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=intron:CHM13_chrY_T0001257:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386354	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=exon:CHM13_chrY_T0001257:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=CDS:CHM13_chrY_T0001257:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=CHM13_chrY_T0001257;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001257;transcript_name=CHM13_chrY_T0001257;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001257;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14156561	14386354	100	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CHM13_chrY_T0001258;Name=UTY
CHM13_chrY	CAT	exon	14156561	14156587	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14156561	14156587	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14156561	14156563	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001258;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14156588	14157721	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14157722	14157892	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14157722	14157892	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14157893	14166982	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261489	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261490	14261537	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261490	14261537	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14261538	14261706	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14266470	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=intron:CHM13_chrY_T0001258:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386354	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=exon:CHM13_chrY_T0001258:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=CDS:CHM13_chrY_T0001258:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=CHM13_chrY_T0001258;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001258;transcript_name=CHM13_chrY_T0001258;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001258;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14156561	14386354	100	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CHM13_chrY_T0001259;Name=UTY
CHM13_chrY	CAT	exon	14156561	14156587	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14156561	14156587	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14156561	14156563	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001259;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14156588	14157721	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14157722	14157892	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14157722	14157892	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14157893	14166982	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14265167	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14265168	14265257	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14265168	14265257	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14265258	14265791	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14265792	14265926	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14265792	14265926	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14265927	14266470	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14272970	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=intron:CHM13_chrY_T0001259:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386354	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=exon:CHM13_chrY_T0001259:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=CDS:CHM13_chrY_T0001259:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=CHM13_chrY_T0001259;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001259;transcript_name=CHM13_chrY_T0001259;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001259;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14156561	14386354	100	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CHM13_chrY_T0001260;Name=UTY
CHM13_chrY	CAT	exon	14156561	14156587	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14156561	14156587	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14156561	14156563	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001260;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14156588	14157721	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14157722	14157892	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14157722	14157892	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14157893	14166982	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212890	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14265791	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14265792	14265926	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14265792	14265926	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14265927	14266470	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=intron:CHM13_chrY_T0001260:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386354	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=exon:CHM13_chrY_T0001260:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=CDS:CHM13_chrY_T0001260:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=CHM13_chrY_T0001260;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001260;transcript_name=CHM13_chrY_T0001260;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001260;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14156561	14386354	100	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CHM13_chrY_T0001261;Name=UTY
CHM13_chrY	CAT	exon	14156561	14156587	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14156561	14156587	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14156561	14156563	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001261;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14156588	14157721	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14157722	14157892	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14157722	14157892	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14157893	14166982	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14265167	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14265168	14265323	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14265168	14265323	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14265324	14266470	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=intron:CHM13_chrY_T0001261:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386354	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=exon:CHM13_chrY_T0001261:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=CDS:CHM13_chrY_T0001261:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=CHM13_chrY_T0001261;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001261;transcript_name=CHM13_chrY_T0001261;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001261;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14156561	14386354	100	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CHM13_chrY_T0001262;Name=UTY
CHM13_chrY	CAT	exon	14156561	14156587	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14156561	14156587	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14156561	14156563	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001262;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14156588	14157721	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14157722	14157892	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14157722	14157892	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14157893	14166982	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14266470	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14317697	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14385942	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=intron:CHM13_chrY_T0001262:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386354	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=exon:CHM13_chrY_T0001262:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=CDS:CHM13_chrY_T0001262:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=CHM13_chrY_T0001262;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001262;transcript_name=CHM13_chrY_T0001262;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001262;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14156561	14386354	100	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CHM13_chrY_T0001263;Name=UTY
CHM13_chrY	CAT	exon	14156561	14156587	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14156561	14156587	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14156561	14156563	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001263;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14156588	14166982	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14262078	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262079	14262102	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262079	14262102	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14265791	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14265792	14265926	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14265792	14265926	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14265927	14266470	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=intron:CHM13_chrY_T0001263:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386354	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=exon:CHM13_chrY_T0001263:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=CDS:CHM13_chrY_T0001263:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=CHM13_chrY_T0001263;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001263;transcript_name=CHM13_chrY_T0001263;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001263;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14156561	14386354	100	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CHM13_chrY_T0001264;Name=UTY
CHM13_chrY	CAT	exon	14156561	14156587	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14156561	14156587	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14156561	14156563	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001264;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14156588	14157721	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14157722	14157892	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14157722	14157892	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14157893	14166982	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14166983	14167109	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14166983	14167109	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14167110	14204411	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14204412	14204553	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204412	14204553	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14265791	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14265792	14265926	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14265792	14265926	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14265927	14266470	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:25;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:26;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=intron:CHM13_chrY_T0001264:27;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386354	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=exon:CHM13_chrY_T0001264:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=CDS:CHM13_chrY_T0001264:28;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=CHM13_chrY_T0001264;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001264;transcript_name=CHM13_chrY_T0001264;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001264;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14204146	14387359	100	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CHM13_chrY_T0001266;Name=UTY
CHM13_chrY	CAT	exon	14204146	14204553	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14204408	14204553	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14204408	14204410	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001266;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14204554	14205661	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14205662	14205849	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14205662	14205849	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14205850	14209581	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14209582	14209696	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14209582	14209696	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14209697	14212103	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212104	14212252	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212104	14212252	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212253	14212742	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212743	14212817	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212743	14212817	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212818	14212890	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14212891	14212955	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14212891	14212955	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14212956	14230258	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14266470	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:20;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:21;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:22;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=intron:CHM13_chrY_T0001266:23;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14387359	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=exon:CHM13_chrY_T0001266:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=CDS:CHM13_chrY_T0001266:24;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=CHM13_chrY_T0001266;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001266;transcript_name=CHM13_chrY_T0001266;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001266;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14229738	14387359	100	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CHM13_chrY_T0001267;Name=UTY
CHM13_chrY	CAT	exon	14229738	14230072	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14229818	14230072	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14229818	14229820	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001267;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230073	14230258	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14230259	14230464	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14230259	14230464	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14230465	14231304	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14231305	14231410	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14231305	14231410	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14231411	14232924	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14232925	14233054	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14232925	14233054	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14233055	14242266	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14242267	14243039	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14242267	14243039	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14243040	14261706	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14261707	14262102	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14261707	14262102	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262103	14262626	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14262627	14262722	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14262627	14262722	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14262723	14264580	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14264581	14264673	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14264581	14264673	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14264674	14266470	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14266471	14266690	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14266471	14266690	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14266691	14267133	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14267134	14267232	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14267134	14267232	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14272971	14273097	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:10;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14275960	14276053	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14300564	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:11;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14300565	14300599	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14300565	14300599	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:12;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:13;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:14;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:15;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:16;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:17;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=intron:CHM13_chrY_T0001267:18;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14387359	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=exon:CHM13_chrY_T0001267:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=CDS:CHM13_chrY_T0001267:19;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=CHM13_chrY_T0001267;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001267;transcript_name=CHM13_chrY_T0001267;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001267;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14267192	14386229	1000	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=CHM13_chrY_T0001268;Name=UTY
CHM13_chrY	CAT	exon	14267192	14267232	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=exon:CHM13_chrY_T0001268:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14267233	14272970	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=intron:CHM13_chrY_T0001268:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14272971	14273097	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=exon:CHM13_chrY_T0001268:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14273098	14275959	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=intron:CHM13_chrY_T0001268:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14275960	14276053	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=exon:CHM13_chrY_T0001268:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14276022	14276053	.	-	2	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=CDS:CHM13_chrY_T0001268:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14276022	14276024	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001268;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14276054	14303623	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=intron:CHM13_chrY_T0001268:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=exon:CHM13_chrY_T0001268:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303624	14303678	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=CDS:CHM13_chrY_T0001268:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=intron:CHM13_chrY_T0001268:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=exon:CHM13_chrY_T0001268:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=CDS:CHM13_chrY_T0001268:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=intron:CHM13_chrY_T0001268:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=exon:CHM13_chrY_T0001268:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=CDS:CHM13_chrY_T0001268:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=intron:CHM13_chrY_T0001268:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=exon:CHM13_chrY_T0001268:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=CDS:CHM13_chrY_T0001268:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=intron:CHM13_chrY_T0001268:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=exon:CHM13_chrY_T0001268:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=CDS:CHM13_chrY_T0001268:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=intron:CHM13_chrY_T0001268:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=exon:CHM13_chrY_T0001268:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=CDS:CHM13_chrY_T0001268:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=intron:CHM13_chrY_T0001268:8;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386229	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=exon:CHM13_chrY_T0001268:9;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386229	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=CHM13_chrY_T0001268;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001268;transcript_name=CHM13_chrY_T0001268;gene_name=UTY;ID=CDS:CHM13_chrY_T0001268:7;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14299858	14386193	1000	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=CHM13_chrY_T0001269;Name=UTY
CHM13_chrY	CAT	exon	14299858	14300599	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001269;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=exon:CHM13_chrY_T0001269:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14300600	14303623	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001269;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=intron:CHM13_chrY_T0001269:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14303624	14303678	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001269;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=exon:CHM13_chrY_T0001269:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001269;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=intron:CHM13_chrY_T0001269:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001269;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=exon:CHM13_chrY_T0001269:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001269;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=intron:CHM13_chrY_T0001269:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001269;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=exon:CHM13_chrY_T0001269:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001269;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=intron:CHM13_chrY_T0001269:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001269;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=exon:CHM13_chrY_T0001269:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001269;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=intron:CHM13_chrY_T0001269:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001269;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=exon:CHM13_chrY_T0001269:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001269;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=intron:CHM13_chrY_T0001269:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386193	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=CHM13_chrY_T0001269;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001269;transcript_name=CHM13_chrY_T0001269;gene_name=UTY;ID=exon:CHM13_chrY_T0001269:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14303008	14386667	100	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=CHM13_chrY_T0001270;Name=UTY
CHM13_chrY	CAT	exon	14303008	14303678	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=exon:CHM13_chrY_T0001270:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14303610	14303678	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=CDS:CHM13_chrY_T0001270:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14303610	14303612	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=stop_codon:CHM13_chrY_T0001270;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14303679	14317697	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=intron:CHM13_chrY_T0001270:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14317698	14317818	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=exon:CHM13_chrY_T0001270:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14317698	14317818	.	-	1	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=CDS:CHM13_chrY_T0001270:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14317819	14321439	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=intron:CHM13_chrY_T0001270:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14321440	14321498	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=exon:CHM13_chrY_T0001270:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14321440	14321498	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=CDS:CHM13_chrY_T0001270:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14321499	14355705	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=intron:CHM13_chrY_T0001270:2;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14355706	14355755	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=exon:CHM13_chrY_T0001270:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14355706	14355755	.	-	2	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=CDS:CHM13_chrY_T0001270:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14355756	14376809	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=intron:CHM13_chrY_T0001270:3;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14376810	14376918	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=exon:CHM13_chrY_T0001270:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14376810	14376918	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=CDS:CHM13_chrY_T0001270:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14376919	14385942	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=intron:CHM13_chrY_T0001270:4;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14385943	14386006	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=exon:CHM13_chrY_T0001270:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14385943	14386006	.	-	1	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=CDS:CHM13_chrY_T0001270:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=intron:CHM13_chrY_T0001270:5;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386667	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=exon:CHM13_chrY_T0001270:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14386203	14386354	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=CDS:CHM13_chrY_T0001270:6;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14386352	14386354	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=CHM13_chrY_T0001270;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001270;transcript_name=CHM13_chrY_T0001270;gene_name=UTY;ID=start_codon:CHM13_chrY_T0001270;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14385731	14386612	1000	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=CHM13_chrY_T0001271;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_G0000413;transcript_name=CHM13_chrY_T0001271;gene_name=UTY;ID=CHM13_chrY_T0001271;Name=UTY
CHM13_chrY	CAT	exon	14385731	14386006	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=CHM13_chrY_T0001271;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001271;transcript_name=CHM13_chrY_T0001271;gene_name=UTY;ID=exon:CHM13_chrY_T0001271:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14386007	14386202	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=CHM13_chrY_T0001271;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001271;transcript_name=CHM13_chrY_T0001271;gene_name=UTY;ID=intron:CHM13_chrY_T0001271:0;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14386203	14386612	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=CHM13_chrY_T0001271;gene_id=CHM13_chrY_G0000413;Parent=CHM13_chrY_T0001271;transcript_name=CHM13_chrY_T0001271;gene_name=UTY;ID=exon:CHM13_chrY_T0001271:1;Name=UTY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	14193343	14194083	.	+	.	source_gene_common_name=PSMA6P1;source_gene=ENSG00000215414.4;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;gene_id=CHM13_chrY_G0000414;gene_biotype=processed_pseudogene;gene_name=PSMA6P1;gene_sources=liftoff;ID=CHM13_chrY_G0000414;Name=PSMA6P1
CHM13_chrY	CAT	transcript	14193343	14194083	1000	+	.	source_transcript=ENST00000400275.2;source_transcript_name=PSMA6P1-201;source_gene=ENSG00000215414.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215414.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000400275.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400275.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PSMA6P1;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;transcript_id=CHM13_chrY_T0001265;gene_id=CHM13_chrY_G0000414;Parent=CHM13_chrY_G0000414;transcript_name=CHM13_chrY_T0001265;gene_name=PSMA6P1;ID=CHM13_chrY_T0001265;Name=PSMA6P1
CHM13_chrY	CAT	exon	14193343	14194083	.	+	.	source_transcript=ENST00000400275.2;source_transcript_name=PSMA6P1-201;source_gene=ENSG00000215414.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215414.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000400275.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400275.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PSMA6P1;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;transcript_id=CHM13_chrY_T0001265;gene_id=CHM13_chrY_G0000414;Parent=CHM13_chrY_T0001265;transcript_name=CHM13_chrY_T0001265;gene_name=PSMA6P1;ID=exon:CHM13_chrY_T0001265:0;Name=PSMA6P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	14472597	14532935	.	+	.	source_gene_common_name=ENSG00000297994;source_gene=ENSG00000297994.1;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;gene_id=CHM13_chrY_G0000415;gene_biotype=lncRNA;gene_name=ENSG00000297994;gene_sources=liftoff;ID=CHM13_chrY_G0000415;Name=ENSG00000297994
CHM13_chrY	CAT	transcript	14472597	14532935	1000	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=CHM13_chrY_T0001272;gene_id=CHM13_chrY_G0000415;Parent=CHM13_chrY_G0000415;transcript_name=CHM13_chrY_T0001272;gene_name=ENSG00000297994;ID=CHM13_chrY_T0001272;Name=ENSG00000297994
CHM13_chrY	CAT	exon	14472597	14472640	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=CHM13_chrY_T0001272;gene_id=CHM13_chrY_G0000415;Parent=CHM13_chrY_T0001272;transcript_name=CHM13_chrY_T0001272;gene_name=ENSG00000297994;ID=exon:CHM13_chrY_T0001272:0;Name=ENSG00000297994;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14472641	14473409	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=CHM13_chrY_T0001272;gene_id=CHM13_chrY_G0000415;Parent=CHM13_chrY_T0001272;transcript_name=CHM13_chrY_T0001272;gene_name=ENSG00000297994;ID=intron:CHM13_chrY_T0001272:0;Name=ENSG00000297994;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14473410	14473481	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=CHM13_chrY_T0001272;gene_id=CHM13_chrY_G0000415;Parent=CHM13_chrY_T0001272;transcript_name=CHM13_chrY_T0001272;gene_name=ENSG00000297994;ID=exon:CHM13_chrY_T0001272:1;Name=ENSG00000297994;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14473482	14532614	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=CHM13_chrY_T0001272;gene_id=CHM13_chrY_G0000415;Parent=CHM13_chrY_T0001272;transcript_name=CHM13_chrY_T0001272;gene_name=ENSG00000297994;ID=intron:CHM13_chrY_T0001272:1;Name=ENSG00000297994;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14532615	14532935	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=CHM13_chrY_T0001272;gene_id=CHM13_chrY_G0000415;Parent=CHM13_chrY_T0001272;transcript_name=CHM13_chrY_T0001272;gene_name=ENSG00000297994;ID=exon:CHM13_chrY_T0001272:2;Name=ENSG00000297994;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	14610529	14612654	.	+	.	source_gene_common_name=TMSB4Y;source_gene=ENSG00000154620.6;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;gene_id=CHM13_chrY_G0000416;gene_biotype=protein_coding;gene_name=TMSB4Y;gene_sources=liftoff;ID=CHM13_chrY_G0000416;Name=TMSB4Y
CHM13_chrY	CAT	transcript	14610529	14612654	100	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=CHM13_chrY_T0001273;gene_id=CHM13_chrY_G0000416;Parent=CHM13_chrY_G0000416;transcript_name=CHM13_chrY_T0001273;gene_name=TMSB4Y;ID=CHM13_chrY_T0001273;Name=TMSB4Y
CHM13_chrY	CAT	exon	14610529	14611065	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=CHM13_chrY_T0001273;gene_id=CHM13_chrY_G0000416;Parent=CHM13_chrY_T0001273;transcript_name=CHM13_chrY_T0001273;gene_name=TMSB4Y;ID=exon:CHM13_chrY_T0001273:0;Name=TMSB4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14610966	14611065	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=CHM13_chrY_T0001273;gene_id=CHM13_chrY_G0000416;Parent=CHM13_chrY_T0001273;transcript_name=CHM13_chrY_T0001273;gene_name=TMSB4Y;ID=CDS:CHM13_chrY_T0001273:0;Name=TMSB4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14610966	14610968	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=CHM13_chrY_T0001273;gene_id=CHM13_chrY_G0000416;Parent=CHM13_chrY_T0001273;transcript_name=CHM13_chrY_T0001273;gene_name=TMSB4Y;ID=start_codon:CHM13_chrY_T0001273;Name=TMSB4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14611066	14611854	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=CHM13_chrY_T0001273;gene_id=CHM13_chrY_G0000416;Parent=CHM13_chrY_T0001273;transcript_name=CHM13_chrY_T0001273;gene_name=TMSB4Y;ID=intron:CHM13_chrY_T0001273:0;Name=TMSB4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14611855	14612654	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=CHM13_chrY_T0001273;gene_id=CHM13_chrY_G0000416;Parent=CHM13_chrY_T0001273;transcript_name=CHM13_chrY_T0001273;gene_name=TMSB4Y;ID=exon:CHM13_chrY_T0001273:1;Name=TMSB4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14611855	14611889	.	+	2	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=CHM13_chrY_T0001273;gene_id=CHM13_chrY_G0000416;Parent=CHM13_chrY_T0001273;transcript_name=CHM13_chrY_T0001273;gene_name=TMSB4Y;ID=CDS:CHM13_chrY_T0001273:1;Name=TMSB4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14611887	14611889	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=CHM13_chrY_T0001273;gene_id=CHM13_chrY_G0000416;Parent=CHM13_chrY_T0001273;transcript_name=CHM13_chrY_T0001273;gene_name=TMSB4Y;ID=stop_codon:CHM13_chrY_T0001273;Name=TMSB4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	14610532	14822896	.	+	.	source_gene_common_name=ENSG00000290853;source_gene=ENSG00000290853.2;gene_id=CHM13_chrY_G0000417;gene_biotype=lncRNA;gene_name=ENSG00000290853;gene_sources=liftoff;ID=CHM13_chrY_G0000417;Name=ENSG00000290853
CHM13_chrY	CAT	transcript	14610532	14795631	1000	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_G0000417;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=CHM13_chrY_T0001274;Name=ENSG00000290853
CHM13_chrY	CAT	exon	14610532	14611065	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001274;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001274:0;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14611066	14661266	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001274;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001274:0;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14661267	14661416	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001274;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001274:1;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14661417	14765167	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001274;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001274:1;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14765168	14765297	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001274;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001274:2;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14765298	14766318	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001274;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001274:2;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14766319	14766472	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001274;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001274:3;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14766473	14775717	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001274;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001274:3;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14775718	14775779	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001274;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001274:4;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14775780	14778283	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001274;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001274:4;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14778284	14778449	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001274;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001274:5;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14778450	14793908	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001274;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001274:5;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14793909	14795631	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001274;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001274;transcript_name=CHM13_chrY_T0001274;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001274:6;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14658423	14765245	1000	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001276;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_G0000417;transcript_name=CHM13_chrY_T0001276;gene_name=ENSG00000290853;ID=CHM13_chrY_T0001276;Name=ENSG00000290853
CHM13_chrY	CAT	exon	14658423	14658635	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001276;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001276;transcript_name=CHM13_chrY_T0001276;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001276:0;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14658636	14659723	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001276;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001276;transcript_name=CHM13_chrY_T0001276;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001276:0;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14659724	14659789	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001276;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001276;transcript_name=CHM13_chrY_T0001276;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001276:1;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14659790	14661266	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001276;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001276;transcript_name=CHM13_chrY_T0001276;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001276:1;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14661267	14661416	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001276;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001276;transcript_name=CHM13_chrY_T0001276;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001276:2;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14661417	14697545	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001276;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001276;transcript_name=CHM13_chrY_T0001276;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001276:2;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14697546	14697593	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001276;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001276;transcript_name=CHM13_chrY_T0001276;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001276:3;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14697594	14761095	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001276;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001276;transcript_name=CHM13_chrY_T0001276;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001276:3;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14761096	14761229	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001276;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001276;transcript_name=CHM13_chrY_T0001276;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001276:4;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14761230	14765167	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001276;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001276;transcript_name=CHM13_chrY_T0001276;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001276:4;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14765168	14765245	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001276;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001276;transcript_name=CHM13_chrY_T0001276;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001276:5;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14659728	14778357	1000	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_G0000417;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=CHM13_chrY_T0001277;Name=ENSG00000290853
CHM13_chrY	CAT	exon	14659728	14659789	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001277;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001277:0;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14659790	14661266	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001277;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001277:0;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14661267	14661416	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001277;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001277:1;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14661417	14697545	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001277;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001277:1;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14697546	14697593	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001277;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001277:2;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14697594	14765167	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001277;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001277:2;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14765168	14765297	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001277;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001277:3;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14765298	14766318	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001277;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001277:3;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14766319	14766472	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001277;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001277:4;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14766473	14775717	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001277;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001277:4;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14775718	14775779	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001277;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001277:5;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14775780	14778283	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001277;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001277:5;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14778284	14778357	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001277;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001277;transcript_name=CHM13_chrY_T0001277;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001277:6;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	14778333	14822896	1000	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001278;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_G0000417;transcript_name=CHM13_chrY_T0001278;gene_name=ENSG00000290853;ID=CHM13_chrY_T0001278;Name=ENSG00000290853
CHM13_chrY	CAT	exon	14778333	14778449	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001278;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001278;transcript_name=CHM13_chrY_T0001278;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001278:0;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14778450	14793908	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001278;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001278;transcript_name=CHM13_chrY_T0001278;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001278:0;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14793909	14794114	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001278;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001278;transcript_name=CHM13_chrY_T0001278;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001278:1;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14794115	14822417	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001278;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001278;transcript_name=CHM13_chrY_T0001278;gene_name=ENSG00000290853;ID=intron:CHM13_chrY_T0001278:1;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14822418	14822896	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=CHM13_chrY_T0001278;gene_id=CHM13_chrY_G0000417;Parent=CHM13_chrY_T0001278;transcript_name=CHM13_chrY_T0001278;gene_name=ENSG00000290853;ID=exon:CHM13_chrY_T0001278:2;Name=ENSG00000290853;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	14658286	14822476	.	+	.	source_gene_common_name=ANOS2P;source_gene=ENSG00000241859.8;gene_id=CHM13_chrY_G0000418;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ANOS2P;gene_sources=liftoff;ID=CHM13_chrY_G0000418;Name=ANOS2P
CHM13_chrY	CAT	transcript	14658286	14822476	1000	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_G0000418;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=CHM13_chrY_T0001275;Name=ANOS2P
CHM13_chrY	CAT	exon	14658286	14658635	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=exon:CHM13_chrY_T0001275:0;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14658636	14697545	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=intron:CHM13_chrY_T0001275:0;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14697546	14697593	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=exon:CHM13_chrY_T0001275:1;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14697594	14765152	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=intron:CHM13_chrY_T0001275:1;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14765153	14765375	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=exon:CHM13_chrY_T0001275:2;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14765376	14775717	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=intron:CHM13_chrY_T0001275:2;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14775718	14775901	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=exon:CHM13_chrY_T0001275:3;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14775902	14778332	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=intron:CHM13_chrY_T0001275:3;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14778333	14778449	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=exon:CHM13_chrY_T0001275:4;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14778450	14793908	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=intron:CHM13_chrY_T0001275:4;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14793909	14794114	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=exon:CHM13_chrY_T0001275:5;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14794115	14809524	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=intron:CHM13_chrY_T0001275:5;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14809525	14809619	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=exon:CHM13_chrY_T0001275:6;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14809620	14812331	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=intron:CHM13_chrY_T0001275:6;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14812332	14812502	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=exon:CHM13_chrY_T0001275:7;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14812503	14813476	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=intron:CHM13_chrY_T0001275:7;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14813477	14813697	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=exon:CHM13_chrY_T0001275:8;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14813698	14814822	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=intron:CHM13_chrY_T0001275:8;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14814823	14814964	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=exon:CHM13_chrY_T0001275:9;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14814965	14822417	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=intron:CHM13_chrY_T0001275:9;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14822418	14822476	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=CHM13_chrY_T0001275;gene_id=CHM13_chrY_G0000418;Parent=CHM13_chrY_T0001275;transcript_name=CHM13_chrY_T0001275;gene_name=ANOS2P;ID=exon:CHM13_chrY_T0001275:10;Name=ANOS2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	14892390	14893091	.	-	.	source_gene_common_name=VCY;source_gene=ENSG00000129864.7;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;gene_id=CHM13_chrY_G0000419;gene_biotype=protein_coding;gene_name=VCY;gene_sources=liftoff;ID=CHM13_chrY_G0000419;Name=VCY
CHM13_chrY	CAT	transcript	14892390	14893091	100	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=CHM13_chrY_T0001279;gene_id=CHM13_chrY_G0000419;Parent=CHM13_chrY_G0000419;transcript_name=CHM13_chrY_T0001279;gene_name=VCY;ID=CHM13_chrY_T0001279;Name=VCY
CHM13_chrY	CAT	exon	14892390	14892764	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=CHM13_chrY_T0001279;gene_id=CHM13_chrY_G0000419;Parent=CHM13_chrY_T0001279;transcript_name=CHM13_chrY_T0001279;gene_name=VCY;ID=exon:CHM13_chrY_T0001279:0;Name=VCY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14892489	14892764	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=CHM13_chrY_T0001279;gene_id=CHM13_chrY_G0000419;Parent=CHM13_chrY_T0001279;transcript_name=CHM13_chrY_T0001279;gene_name=VCY;ID=CDS:CHM13_chrY_T0001279:0;Name=VCY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14892489	14892491	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=CHM13_chrY_T0001279;gene_id=CHM13_chrY_G0000419;Parent=CHM13_chrY_T0001279;transcript_name=CHM13_chrY_T0001279;gene_name=VCY;ID=stop_codon:CHM13_chrY_T0001279;Name=VCY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14892765	14892956	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=CHM13_chrY_T0001279;gene_id=CHM13_chrY_G0000419;Parent=CHM13_chrY_T0001279;transcript_name=CHM13_chrY_T0001279;gene_name=VCY;ID=intron:CHM13_chrY_T0001279:0;Name=VCY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14892957	14893091	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=CHM13_chrY_T0001279;gene_id=CHM13_chrY_G0000419;Parent=CHM13_chrY_T0001279;transcript_name=CHM13_chrY_T0001279;gene_name=VCY;ID=exon:CHM13_chrY_T0001279:1;Name=VCY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14892957	14893058	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=CHM13_chrY_T0001279;gene_id=CHM13_chrY_G0000419;Parent=CHM13_chrY_T0001279;transcript_name=CHM13_chrY_T0001279;gene_name=VCY;ID=CDS:CHM13_chrY_T0001279:1;Name=VCY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14893056	14893058	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=CHM13_chrY_T0001279;gene_id=CHM13_chrY_G0000419;Parent=CHM13_chrY_T0001279;transcript_name=CHM13_chrY_T0001279;gene_name=VCY;ID=start_codon:CHM13_chrY_T0001279;Name=VCY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	14962884	14963615	.	+	.	source_gene_common_name=VCY1B;source_gene=ENSG00000129862.7;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;gene_id=CHM13_chrY_G0000420;gene_biotype=protein_coding;gene_name=VCY1B;gene_sources=liftoff;ID=CHM13_chrY_G0000420;Name=VCY1B
CHM13_chrY	CAT	transcript	14962884	14963615	100	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=CHM13_chrY_T0001280;gene_id=CHM13_chrY_G0000420;Parent=CHM13_chrY_G0000420;transcript_name=CHM13_chrY_T0001280;gene_name=VCY1B;ID=CHM13_chrY_T0001280;Name=VCY1B
CHM13_chrY	CAT	exon	14962884	14963048	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=CHM13_chrY_T0001280;gene_id=CHM13_chrY_G0000420;Parent=CHM13_chrY_T0001280;transcript_name=CHM13_chrY_T0001280;gene_name=VCY1B;ID=exon:CHM13_chrY_T0001280:0;Name=VCY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14962947	14963048	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=CHM13_chrY_T0001280;gene_id=CHM13_chrY_G0000420;Parent=CHM13_chrY_T0001280;transcript_name=CHM13_chrY_T0001280;gene_name=VCY1B;ID=CDS:CHM13_chrY_T0001280:0;Name=VCY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	14962947	14962949	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=CHM13_chrY_T0001280;gene_id=CHM13_chrY_G0000420;Parent=CHM13_chrY_T0001280;transcript_name=CHM13_chrY_T0001280;gene_name=VCY1B;ID=start_codon:CHM13_chrY_T0001280;Name=VCY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14963049	14963240	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=CHM13_chrY_T0001280;gene_id=CHM13_chrY_G0000420;Parent=CHM13_chrY_T0001280;transcript_name=CHM13_chrY_T0001280;gene_name=VCY1B;ID=intron:CHM13_chrY_T0001280:0;Name=VCY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14963241	14963615	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=CHM13_chrY_T0001280;gene_id=CHM13_chrY_G0000420;Parent=CHM13_chrY_T0001280;transcript_name=CHM13_chrY_T0001280;gene_name=VCY1B;ID=exon:CHM13_chrY_T0001280:1;Name=VCY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	14963241	14963516	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=CHM13_chrY_T0001280;gene_id=CHM13_chrY_G0000420;Parent=CHM13_chrY_T0001280;transcript_name=CHM13_chrY_T0001280;gene_name=VCY1B;ID=CDS:CHM13_chrY_T0001280:1;Name=VCY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	14963514	14963516	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=CHM13_chrY_T0001280;gene_id=CHM13_chrY_G0000420;Parent=CHM13_chrY_T0001280;transcript_name=CHM13_chrY_T0001280;gene_name=VCY1B;ID=stop_codon:CHM13_chrY_T0001280;Name=VCY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	14987732	14993257	.	+	.	source_gene_common_name=PNPLA4P1;source_gene=ENSG00000235451.1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;gene_id=CHM13_chrY_G0000421;gene_biotype=unprocessed_pseudogene;gene_name=PNPLA4P1;gene_sources=liftoff;ID=CHM13_chrY_G0000421;Name=PNPLA4P1
CHM13_chrY	CAT	transcript	14987732	14993257	1000	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=CHM13_chrY_T0001281;gene_id=CHM13_chrY_G0000421;Parent=CHM13_chrY_G0000421;transcript_name=CHM13_chrY_T0001281;gene_name=PNPLA4P1;ID=CHM13_chrY_T0001281;Name=PNPLA4P1
CHM13_chrY	CAT	exon	14987732	14987826	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=CHM13_chrY_T0001281;gene_id=CHM13_chrY_G0000421;Parent=CHM13_chrY_T0001281;transcript_name=CHM13_chrY_T0001281;gene_name=PNPLA4P1;ID=exon:CHM13_chrY_T0001281:0;Name=PNPLA4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14987827	14987962	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=CHM13_chrY_T0001281;gene_id=CHM13_chrY_G0000421;Parent=CHM13_chrY_T0001281;transcript_name=CHM13_chrY_T0001281;gene_name=PNPLA4P1;ID=intron:CHM13_chrY_T0001281:0;Name=PNPLA4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14987963	14988106	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=CHM13_chrY_T0001281;gene_id=CHM13_chrY_G0000421;Parent=CHM13_chrY_T0001281;transcript_name=CHM13_chrY_T0001281;gene_name=PNPLA4P1;ID=exon:CHM13_chrY_T0001281:1;Name=PNPLA4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	14988107	14993191	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=CHM13_chrY_T0001281;gene_id=CHM13_chrY_G0000421;Parent=CHM13_chrY_T0001281;transcript_name=CHM13_chrY_T0001281;gene_name=PNPLA4P1;ID=intron:CHM13_chrY_T0001281:1;Name=PNPLA4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	14993192	14993257	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=CHM13_chrY_T0001281;gene_id=CHM13_chrY_G0000421;Parent=CHM13_chrY_T0001281;transcript_name=CHM13_chrY_T0001281;gene_name=PNPLA4P1;ID=exon:CHM13_chrY_T0001281:2;Name=PNPLA4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	15008245	15008380	.	-	.	source_gene_common_name=ENSG00000289706;source_gene=ENSG00000289706.1;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;gene_id=CHM13_chrY_G0000422;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000289706;gene_sources=liftoff;ID=CHM13_chrY_G0000422;Name=ENSG00000289706
CHM13_chrY	CAT	transcript	15008245	15008380	1000	-	.	source_transcript=ENST00000696463.1;source_transcript_name=ENST00000696463;source_gene=ENSG00000289706.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289706.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696463.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289706;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;transcript_id=CHM13_chrY_T0001282;gene_id=CHM13_chrY_G0000422;Parent=CHM13_chrY_G0000422;transcript_name=CHM13_chrY_T0001282;gene_name=ENSG00000289706;ID=CHM13_chrY_T0001282;Name=ENSG00000289706
CHM13_chrY	CAT	exon	15008245	15008380	.	-	.	source_transcript=ENST00000696463.1;source_transcript_name=ENST00000696463;source_gene=ENSG00000289706.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289706.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289706;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;transcript_id=CHM13_chrY_T0001282;gene_id=CHM13_chrY_G0000422;Parent=CHM13_chrY_T0001282;transcript_name=CHM13_chrY_T0001282;gene_name=ENSG00000289706;ID=exon:CHM13_chrY_T0001282:0;Name=ENSG00000289706;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	15182839	15184116	.	-	.	source_gene_common_name=ENSG00000223517;source_gene=ENSG00000223517.1;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;gene_id=CHM13_chrY_G0000423;gene_biotype=lncRNA;gene_name=ENSG00000223517;gene_sources=liftoff;ID=CHM13_chrY_G0000423;Name=ENSG00000223517
CHM13_chrY	CAT	transcript	15182839	15184116	1000	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=CHM13_chrY_T0001283;gene_id=CHM13_chrY_G0000423;Parent=CHM13_chrY_G0000423;transcript_name=CHM13_chrY_T0001283;gene_name=ENSG00000223517;ID=CHM13_chrY_T0001283;Name=ENSG00000223517
CHM13_chrY	CAT	exon	15182839	15183238	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=CHM13_chrY_T0001283;gene_id=CHM13_chrY_G0000423;Parent=CHM13_chrY_T0001283;transcript_name=CHM13_chrY_T0001283;gene_name=ENSG00000223517;ID=exon:CHM13_chrY_T0001283:0;Name=ENSG00000223517;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15183239	15183976	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=CHM13_chrY_T0001283;gene_id=CHM13_chrY_G0000423;Parent=CHM13_chrY_T0001283;transcript_name=CHM13_chrY_T0001283;gene_name=ENSG00000223517;ID=intron:CHM13_chrY_T0001283:0;Name=ENSG00000223517;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15183977	15184116	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=CHM13_chrY_T0001283;gene_id=CHM13_chrY_G0000423;Parent=CHM13_chrY_T0001283;transcript_name=CHM13_chrY_T0001283;gene_name=ENSG00000223517;ID=exon:CHM13_chrY_T0001283:1;Name=ENSG00000223517;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	15429201	15752217	.	+	.	source_gene_common_name=NLGN4Y;source_gene=ENSG00000165246.15;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;gene_id=CHM13_chrY_G0000424;gene_biotype=protein_coding;gene_name=NLGN4Y;gene_sources=liftoff;ID=CHM13_chrY_G0000424;Name=NLGN4Y
CHM13_chrY	CAT	transcript	15429201	15752202	100	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_G0000424;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=CHM13_chrY_T0001284;Name=NLGN4Y
CHM13_chrY	CAT	exon	15429201	15429569	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001284:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15429570	15528652	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001284:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15528653	15529235	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001284:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15528764	15529235	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001284:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	15528764	15528766	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=start_codon:CHM13_chrY_T0001284;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15529236	15626113	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001284:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15626114	15626173	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001284:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15626114	15626173	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001284:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15626174	15629750	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001284:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15629751	15629903	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001284:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15629751	15629903	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001284:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15629904	15730776	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001284:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15730777	15730962	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001284:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15730777	15730962	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001284:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15730963	15736292	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001284:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15736293	15737082	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001284:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15736293	15737082	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001284:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15737083	15746975	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001284:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15746976	15752202	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001284:6;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15746976	15747825	.	+	1	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001284:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	15747823	15747825	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=CHM13_chrY_T0001284;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001284;transcript_name=CHM13_chrY_T0001284;gene_name=NLGN4Y;ID=stop_codon:CHM13_chrY_T0001284;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	15429266	15529141	1000	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=CHM13_chrY_T0001285;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_G0000424;transcript_name=CHM13_chrY_T0001285;gene_name=NLGN4Y;ID=CHM13_chrY_T0001285;Name=NLGN4Y
CHM13_chrY	CAT	exon	15429266	15429569	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=CHM13_chrY_T0001285;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001285;transcript_name=CHM13_chrY_T0001285;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001285:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15429570	15528652	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=CHM13_chrY_T0001285;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001285;transcript_name=CHM13_chrY_T0001285;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001285:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15528653	15529141	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=CHM13_chrY_T0001285;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001285;transcript_name=CHM13_chrY_T0001285;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001285:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	15429380	15752213	100	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_G0000424;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=CHM13_chrY_T0001286;Name=NLGN4Y
CHM13_chrY	CAT	exon	15429380	15429569	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001286:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15429570	15626113	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001286:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15626114	15626173	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001286:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15626174	15629750	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001286:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15629751	15629903	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001286:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15629783	15629903	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001286:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	15629783	15629785	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=start_codon:CHM13_chrY_T0001286;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15629904	15730776	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001286:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15730777	15730962	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001286:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15730777	15730962	.	+	2	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001286:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15730963	15736292	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001286:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15736293	15737082	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001286:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15736293	15737082	.	+	2	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001286:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15737083	15746975	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001286:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15746976	15752213	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001286:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15746976	15747825	.	+	1	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001286:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	15747823	15747825	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=CHM13_chrY_T0001286;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001286;transcript_name=CHM13_chrY_T0001286;gene_name=NLGN4Y;ID=stop_codon:CHM13_chrY_T0001286;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	15430374	15750289	100	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_G0000424;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=CHM13_chrY_T0001287;Name=NLGN4Y
CHM13_chrY	CAT	exon	15430374	15430526	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001287:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15430527	15528664	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001287:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15528665	15529235	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001287:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15528764	15529235	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001287:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	15528764	15528766	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=start_codon:CHM13_chrY_T0001287;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15529236	15629750	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001287:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15629751	15629903	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001287:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15629751	15629903	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001287:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15629904	15730776	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001287:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15730777	15730962	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001287:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15730777	15730962	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001287:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15730963	15736292	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001287:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15736293	15737082	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001287:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15736293	15737082	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001287:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15737083	15746975	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001287:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15746976	15750289	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001287:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15746976	15747825	.	+	1	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001287:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	15747823	15747825	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=CHM13_chrY_T0001287;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001287;transcript_name=CHM13_chrY_T0001287;gene_name=NLGN4Y;ID=stop_codon:CHM13_chrY_T0001287;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	15430374	15750289	100	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_G0000424;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=CHM13_chrY_T0001288;Name=NLGN4Y
CHM13_chrY	CAT	exon	15430374	15430526	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001288:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15430527	15528664	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001288:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15528665	15529235	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001288:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15528764	15529235	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001288:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	15528764	15528766	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=start_codon:CHM13_chrY_T0001288;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15529236	15626113	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001288:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15626114	15626173	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001288:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15626114	15626173	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001288:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15626174	15629750	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001288:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15629751	15629903	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001288:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15629751	15629903	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001288:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15629904	15655254	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001288:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15655255	15655365	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001288:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15655255	15655365	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001288:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15655366	15730776	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001288:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15730777	15730962	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001288:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15730777	15730962	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001288:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15730963	15736292	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001288:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15736293	15737082	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001288:6;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15736293	15737082	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001288:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15737083	15746975	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001288:6;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15746976	15750289	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001288:7;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15746976	15747825	.	+	1	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001288:6;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	15747823	15747825	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=CHM13_chrY_T0001288;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001288;transcript_name=CHM13_chrY_T0001288;gene_name=NLGN4Y;ID=stop_codon:CHM13_chrY_T0001288;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	15430374	15750289	1000	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_G0000424;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=CHM13_chrY_T0001289;Name=NLGN4Y
CHM13_chrY	CAT	exon	15430374	15430526	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001289:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15430527	15528664	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001289:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15528665	15529235	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001289:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15529236	15626113	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001289:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15626114	15626173	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001289:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15626174	15629750	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001289:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15629751	15629903	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001289:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15629904	15655254	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001289:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15655255	15655365	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001289:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15655366	15658312	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001289:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15658313	15658434	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001289:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15658435	15730776	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001289:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15730777	15730962	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001289:6;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15730963	15736292	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001289:6;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15736293	15737082	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001289:7;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15737083	15746975	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001289:7;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15746976	15750289	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=CHM13_chrY_T0001289;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001289;transcript_name=CHM13_chrY_T0001289;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001289:8;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	15430595	15528864	100	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=CHM13_chrY_T0001290;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_G0000424;transcript_name=CHM13_chrY_T0001290;gene_name=NLGN4Y;ID=CHM13_chrY_T0001290;Name=NLGN4Y
CHM13_chrY	CAT	exon	15430595	15430912	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=CHM13_chrY_T0001290;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001290;transcript_name=CHM13_chrY_T0001290;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001290:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15430913	15528652	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=CHM13_chrY_T0001290;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001290;transcript_name=CHM13_chrY_T0001290;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001290:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15528653	15528864	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=CHM13_chrY_T0001290;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001290;transcript_name=CHM13_chrY_T0001290;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001290:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15528764	15528864	.	+	0	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=CHM13_chrY_T0001290;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001290;transcript_name=CHM13_chrY_T0001290;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001290:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	15528764	15528766	.	+	0	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=CHM13_chrY_T0001290;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001290;transcript_name=CHM13_chrY_T0001290;gene_name=NLGN4Y;ID=start_codon:CHM13_chrY_T0001290;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	15431157	15752217	100	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_G0000424;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=CHM13_chrY_T0001291;Name=NLGN4Y
CHM13_chrY	CAT	exon	15431157	15431336	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001291:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15431337	15528652	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001291:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15528653	15529235	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001291:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15528764	15529235	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001291:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	15528764	15528766	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=start_codon:CHM13_chrY_T0001291;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15529236	15626113	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001291:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15626114	15626173	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001291:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15626114	15626173	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001291:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15626174	15629750	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001291:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15629751	15629903	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001291:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15629751	15629903	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001291:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15629904	15730776	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001291:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15730777	15730962	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001291:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15730777	15730962	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001291:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15730963	15736292	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001291:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15736293	15737082	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001291:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15736293	15737082	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001291:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15737083	15746975	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001291:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15746976	15752217	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001291:6;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15746976	15747825	.	+	1	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001291:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	15747823	15747825	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=CHM13_chrY_T0001291;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001291;transcript_name=CHM13_chrY_T0001291;gene_name=NLGN4Y;ID=stop_codon:CHM13_chrY_T0001291;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	15431157	15529012	1000	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=CHM13_chrY_T0001292;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_G0000424;transcript_name=CHM13_chrY_T0001292;gene_name=NLGN4Y;ID=CHM13_chrY_T0001292;Name=NLGN4Y
CHM13_chrY	CAT	exon	15431157	15431336	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=CHM13_chrY_T0001292;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001292;transcript_name=CHM13_chrY_T0001292;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001292:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15431337	15528652	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=CHM13_chrY_T0001292;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001292;transcript_name=CHM13_chrY_T0001292;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001292:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15528653	15529012	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=CHM13_chrY_T0001292;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001292;transcript_name=CHM13_chrY_T0001292;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001292:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	15431202	15750210	100	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_G0000424;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=CHM13_chrY_T0001293;Name=NLGN4Y
CHM13_chrY	CAT	exon	15431202	15431564	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001293:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15431565	15528652	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001293:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15528653	15529235	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001293:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15528764	15529235	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001293:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	15528764	15528766	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=start_codon:CHM13_chrY_T0001293;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15529236	15629750	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001293:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15629751	15629903	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001293:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15629751	15629903	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001293:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15629904	15730776	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001293:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15730777	15730962	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001293:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15730777	15730962	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001293:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15730963	15736292	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001293:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15736293	15737082	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001293:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15736293	15737082	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001293:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15737083	15746975	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001293:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15746976	15750210	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001293:5;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15746976	15747825	.	+	1	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001293:4;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	15747823	15747825	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=CHM13_chrY_T0001293;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001293;transcript_name=CHM13_chrY_T0001293;gene_name=NLGN4Y;ID=stop_codon:CHM13_chrY_T0001293;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	15528825	15640185	100	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=CHM13_chrY_T0001294;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_G0000424;transcript_name=CHM13_chrY_T0001294;gene_name=NLGN4Y;ID=CHM13_chrY_T0001294;Name=NLGN4Y
CHM13_chrY	CAT	exon	15528825	15529235	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=CHM13_chrY_T0001294;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001294;transcript_name=CHM13_chrY_T0001294;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001294:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15528825	15529235	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=CHM13_chrY_T0001294;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001294;transcript_name=CHM13_chrY_T0001294;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001294:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15529236	15626113	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=CHM13_chrY_T0001294;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001294;transcript_name=CHM13_chrY_T0001294;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001294:0;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15626114	15626173	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=CHM13_chrY_T0001294;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001294;transcript_name=CHM13_chrY_T0001294;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001294:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15626114	15626173	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=CHM13_chrY_T0001294;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001294;transcript_name=CHM13_chrY_T0001294;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001294:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15626174	15629750	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=CHM13_chrY_T0001294;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001294;transcript_name=CHM13_chrY_T0001294;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001294:1;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15629751	15629903	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=CHM13_chrY_T0001294;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001294;transcript_name=CHM13_chrY_T0001294;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001294:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15629751	15629903	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=CHM13_chrY_T0001294;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001294;transcript_name=CHM13_chrY_T0001294;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001294:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15629904	15640087	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=CHM13_chrY_T0001294;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001294;transcript_name=CHM13_chrY_T0001294;gene_name=NLGN4Y;ID=intron:CHM13_chrY_T0001294:2;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15640088	15640185	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=CHM13_chrY_T0001294;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001294;transcript_name=CHM13_chrY_T0001294;gene_name=NLGN4Y;ID=exon:CHM13_chrY_T0001294:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	15640088	15640173	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=CHM13_chrY_T0001294;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001294;transcript_name=CHM13_chrY_T0001294;gene_name=NLGN4Y;ID=CDS:CHM13_chrY_T0001294:3;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	15640171	15640173	.	+	0	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=CHM13_chrY_T0001294;gene_id=CHM13_chrY_G0000424;Parent=CHM13_chrY_T0001294;transcript_name=CHM13_chrY_T0001294;gene_name=NLGN4Y;ID=stop_codon:CHM13_chrY_T0001294;Name=NLGN4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	15545739	15547001	.	+	.	source_gene_common_name=AGKP1;source_gene=ENSG00000226555.1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;gene_id=CHM13_chrY_G0000425;gene_biotype=processed_pseudogene;gene_name=AGKP1;gene_sources=liftoff;ID=CHM13_chrY_G0000425;Name=AGKP1
CHM13_chrY	CAT	transcript	15545739	15547001	1000	+	.	source_transcript=ENST00000455254.1;source_transcript_name=AGKP1-201;source_gene=ENSG00000226555.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226555.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455254.1;transcript_score=199.921;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGKP1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;transcript_id=CHM13_chrY_T0001295;gene_id=CHM13_chrY_G0000425;Parent=CHM13_chrY_G0000425;transcript_name=CHM13_chrY_T0001295;gene_name=AGKP1;ID=CHM13_chrY_T0001295;Name=AGKP1
CHM13_chrY	CAT	exon	15545739	15547001	.	+	.	source_transcript=ENST00000455254.1;source_transcript_name=AGKP1-201;source_gene=ENSG00000226555.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226555.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455254.1;transcript_score=199.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGKP1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;transcript_id=CHM13_chrY_T0001295;gene_id=CHM13_chrY_G0000425;Parent=CHM13_chrY_T0001295;transcript_name=CHM13_chrY_T0001295;gene_name=AGKP1;ID=exon:CHM13_chrY_T0001295:0;Name=AGKP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	15700272	15710622	.	-	.	source_gene_common_name=NLGN4Y-AS1;source_gene=ENSG00000228787.1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;gene_id=CHM13_chrY_G0000426;gene_biotype=lncRNA;gene_name=NLGN4Y-AS1;gene_sources=liftoff;ID=CHM13_chrY_G0000426;Name=NLGN4Y-AS1
CHM13_chrY	CAT	transcript	15700272	15710622	1000	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=CHM13_chrY_T0001296;gene_id=CHM13_chrY_G0000426;Parent=CHM13_chrY_G0000426;transcript_name=CHM13_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=CHM13_chrY_T0001296;Name=NLGN4Y-AS1
CHM13_chrY	CAT	exon	15700272	15700617	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=CHM13_chrY_T0001296;gene_id=CHM13_chrY_G0000426;Parent=CHM13_chrY_T0001296;transcript_name=CHM13_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=exon:CHM13_chrY_T0001296:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15700618	15705253	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=CHM13_chrY_T0001296;gene_id=CHM13_chrY_G0000426;Parent=CHM13_chrY_T0001296;transcript_name=CHM13_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=intron:CHM13_chrY_T0001296:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15705254	15705341	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=CHM13_chrY_T0001296;gene_id=CHM13_chrY_G0000426;Parent=CHM13_chrY_T0001296;transcript_name=CHM13_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=exon:CHM13_chrY_T0001296:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15705342	15707907	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=CHM13_chrY_T0001296;gene_id=CHM13_chrY_G0000426;Parent=CHM13_chrY_T0001296;transcript_name=CHM13_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=intron:CHM13_chrY_T0001296:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15707908	15707976	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=CHM13_chrY_T0001296;gene_id=CHM13_chrY_G0000426;Parent=CHM13_chrY_T0001296;transcript_name=CHM13_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=exon:CHM13_chrY_T0001296:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15707977	15710593	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=CHM13_chrY_T0001296;gene_id=CHM13_chrY_G0000426;Parent=CHM13_chrY_T0001296;transcript_name=CHM13_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=intron:CHM13_chrY_T0001296:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15710594	15710622	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=CHM13_chrY_T0001296;gene_id=CHM13_chrY_G0000426;Parent=CHM13_chrY_T0001296;transcript_name=CHM13_chrY_T0001296;gene_name=NLGN4Y-AS1;ID=exon:CHM13_chrY_T0001296:3;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	15814459	15814629	.	+	.	source_gene_common_name=MED13P1;source_gene=ENSG00000236131.1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;gene_id=CHM13_chrY_G0000427;gene_biotype=processed_pseudogene;gene_name=MED13P1;gene_sources=liftoff;ID=CHM13_chrY_G0000427;Name=MED13P1
CHM13_chrY	CAT	transcript	15814459	15814629	1000	+	.	source_transcript=ENST00000428342.1;source_transcript_name=MED13P1-201;source_gene=ENSG00000236131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428342.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428342.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED13P1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;transcript_id=CHM13_chrY_T0001297;gene_id=CHM13_chrY_G0000427;Parent=CHM13_chrY_G0000427;transcript_name=CHM13_chrY_T0001297;gene_name=MED13P1;ID=CHM13_chrY_T0001297;Name=MED13P1
CHM13_chrY	CAT	exon	15814459	15814629	.	+	.	source_transcript=ENST00000428342.1;source_transcript_name=MED13P1-201;source_gene=ENSG00000236131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428342.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428342.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED13P1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;transcript_id=CHM13_chrY_T0001297;gene_id=CHM13_chrY_G0000427;Parent=CHM13_chrY_T0001297;transcript_name=CHM13_chrY_T0001297;gene_name=MED13P1;ID=exon:CHM13_chrY_T0001297:0;Name=MED13P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	15832258	15833410	.	-	.	source_gene_common_name=ENSG00000304558;source_gene=ENSG00000304558.1;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;gene_id=CHM13_chrY_G0000428;gene_biotype=lncRNA;gene_name=ENSG00000304558;gene_sources=liftoff;ID=CHM13_chrY_G0000428;Name=ENSG00000304558
CHM13_chrY	CAT	transcript	15832258	15833410	1000	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=CHM13_chrY_T0001298;gene_id=CHM13_chrY_G0000428;Parent=CHM13_chrY_G0000428;transcript_name=CHM13_chrY_T0001298;gene_name=ENSG00000304558;ID=CHM13_chrY_T0001298;Name=ENSG00000304558
CHM13_chrY	CAT	exon	15832258	15833136	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=CHM13_chrY_T0001298;gene_id=CHM13_chrY_G0000428;Parent=CHM13_chrY_T0001298;transcript_name=CHM13_chrY_T0001298;gene_name=ENSG00000304558;ID=exon:CHM13_chrY_T0001298:0;Name=ENSG00000304558;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15833137	15833292	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=CHM13_chrY_T0001298;gene_id=CHM13_chrY_G0000428;Parent=CHM13_chrY_T0001298;transcript_name=CHM13_chrY_T0001298;gene_name=ENSG00000304558;ID=intron:CHM13_chrY_T0001298:0;Name=ENSG00000304558;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15833293	15833410	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=CHM13_chrY_T0001298;gene_id=CHM13_chrY_G0000428;Parent=CHM13_chrY_T0001298;transcript_name=CHM13_chrY_T0001298;gene_name=ENSG00000304558;ID=exon:CHM13_chrY_T0001298:1;Name=ENSG00000304558;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	15848108	15848311	.	-	.	source_gene_common_name=CYCSP46;source_gene=ENSG00000227949.1;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;gene_id=CHM13_chrY_G0000429;gene_biotype=processed_pseudogene;gene_name=CYCSP46;gene_sources=liftoff;ID=CHM13_chrY_G0000429;Name=CYCSP46
CHM13_chrY	CAT	transcript	15848108	15848311	1000	-	.	source_transcript=ENST00000423569.1;source_transcript_name=CYCSP46-201;source_gene=ENSG00000227949.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227949.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423569.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP46;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;transcript_id=CHM13_chrY_T0001299;gene_id=CHM13_chrY_G0000429;Parent=CHM13_chrY_G0000429;transcript_name=CHM13_chrY_T0001299;gene_name=CYCSP46;ID=CHM13_chrY_T0001299;Name=CYCSP46
CHM13_chrY	CAT	exon	15848108	15848311	.	-	.	source_transcript=ENST00000423569.1;source_transcript_name=CYCSP46-201;source_gene=ENSG00000227949.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227949.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423569.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP46;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;transcript_id=CHM13_chrY_T0001299;gene_id=CHM13_chrY_G0000429;Parent=CHM13_chrY_T0001299;transcript_name=CHM13_chrY_T0001299;gene_name=CYCSP46;ID=exon:CHM13_chrY_T0001299:0;Name=CYCSP46;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	15848307	15849276	.	+	.	source_gene_common_name=ENSG00000224518;source_gene=ENSG00000224518.2;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;gene_id=CHM13_chrY_G0000430;gene_biotype=processed_pseudogene;gene_name=ENSG00000224518;gene_sources=liftoff;ID=CHM13_chrY_G0000430;Name=ENSG00000224518
CHM13_chrY	CAT	transcript	15848307	15849276	1000	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=CHM13_chrY_T0001300;gene_id=CHM13_chrY_G0000430;Parent=CHM13_chrY_G0000430;transcript_name=CHM13_chrY_T0001300;gene_name=ENSG00000224518;ID=CHM13_chrY_T0001300;Name=ENSG00000224518
CHM13_chrY	CAT	exon	15848307	15848382	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=CHM13_chrY_T0001300;gene_id=CHM13_chrY_G0000430;Parent=CHM13_chrY_T0001300;transcript_name=CHM13_chrY_T0001300;gene_name=ENSG00000224518;ID=exon:CHM13_chrY_T0001300:0;Name=ENSG00000224518;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	15848383	15849221	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=CHM13_chrY_T0001300;gene_id=CHM13_chrY_G0000430;Parent=CHM13_chrY_T0001300;transcript_name=CHM13_chrY_T0001300;gene_name=ENSG00000224518;ID=intron:CHM13_chrY_T0001300:0;Name=ENSG00000224518;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	15849222	15849276	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=CHM13_chrY_T0001300;gene_id=CHM13_chrY_G0000430;Parent=CHM13_chrY_T0001300;transcript_name=CHM13_chrY_T0001300;gene_name=ENSG00000224518;ID=exon:CHM13_chrY_T0001300:1;Name=ENSG00000224518;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	16255181	16362588	.	-	.	source_gene_common_name=PUDPP1;source_gene=ENSG00000234620.1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;gene_id=CHM13_chrY_G0000431;gene_biotype=unprocessed_pseudogene;gene_name=PUDPP1;gene_sources=liftoff;ID=CHM13_chrY_G0000431;Name=PUDPP1
CHM13_chrY	CAT	transcript	16255181	16362588	1000	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=CHM13_chrY_T0001301;gene_id=CHM13_chrY_G0000431;Parent=CHM13_chrY_G0000431;transcript_name=CHM13_chrY_T0001301;gene_name=PUDPP1;ID=CHM13_chrY_T0001301;Name=PUDPP1
CHM13_chrY	CAT	exon	16255181	16255385	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=CHM13_chrY_T0001301;gene_id=CHM13_chrY_G0000431;Parent=CHM13_chrY_T0001301;transcript_name=CHM13_chrY_T0001301;gene_name=PUDPP1;ID=exon:CHM13_chrY_T0001301:0;Name=PUDPP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16255386	16288109	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=CHM13_chrY_T0001301;gene_id=CHM13_chrY_G0000431;Parent=CHM13_chrY_T0001301;transcript_name=CHM13_chrY_T0001301;gene_name=PUDPP1;ID=intron:CHM13_chrY_T0001301:0;Name=PUDPP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16288110	16288359	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=CHM13_chrY_T0001301;gene_id=CHM13_chrY_G0000431;Parent=CHM13_chrY_T0001301;transcript_name=CHM13_chrY_T0001301;gene_name=PUDPP1;ID=exon:CHM13_chrY_T0001301:1;Name=PUDPP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16288360	16362548	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=CHM13_chrY_T0001301;gene_id=CHM13_chrY_G0000431;Parent=CHM13_chrY_T0001301;transcript_name=CHM13_chrY_T0001301;gene_name=PUDPP1;ID=intron:CHM13_chrY_T0001301:1;Name=PUDPP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16362549	16362588	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=CHM13_chrY_T0001301;gene_id=CHM13_chrY_G0000431;Parent=CHM13_chrY_T0001301;transcript_name=CHM13_chrY_T0001301;gene_name=PUDPP1;ID=exon:CHM13_chrY_T0001301:2;Name=PUDPP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	16362521	16475660	.	+	.	source_gene_common_name=ENSG00000295583;source_gene=ENSG00000295583.1;gene_id=CHM13_chrY_G0000432;gene_biotype=lncRNA;gene_name=ENSG00000295583;gene_sources=liftoff;ID=CHM13_chrY_G0000432;Name=ENSG00000295583
CHM13_chrY	CAT	transcript	16362521	16473652	1000	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001302;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_G0000432;transcript_name=CHM13_chrY_T0001302;gene_name=ENSG00000295583;ID=CHM13_chrY_T0001302;Name=ENSG00000295583
CHM13_chrY	CAT	exon	16362521	16362582	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001302;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001302;transcript_name=CHM13_chrY_T0001302;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001302:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16362583	16366806	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001302;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001302;transcript_name=CHM13_chrY_T0001302;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001302:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16366807	16366888	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001302;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001302;transcript_name=CHM13_chrY_T0001302;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001302:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16366889	16453733	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001302;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001302;transcript_name=CHM13_chrY_T0001302;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001302:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16453734	16453874	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001302;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001302;transcript_name=CHM13_chrY_T0001302;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001302:2;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16453875	16456126	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001302;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001302;transcript_name=CHM13_chrY_T0001302;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001302:2;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16456127	16456248	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001302;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001302;transcript_name=CHM13_chrY_T0001302;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001302:3;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16456249	16473282	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001302;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001302;transcript_name=CHM13_chrY_T0001302;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001302:3;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16473283	16473652	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001302;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001302;transcript_name=CHM13_chrY_T0001302;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001302:4;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	16362527	16475660	1000	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001303;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_G0000432;transcript_name=CHM13_chrY_T0001303;gene_name=ENSG00000295583;ID=CHM13_chrY_T0001303;Name=ENSG00000295583
CHM13_chrY	CAT	exon	16362527	16362582	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001303;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001303;transcript_name=CHM13_chrY_T0001303;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001303:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16362583	16366806	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001303;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001303;transcript_name=CHM13_chrY_T0001303;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001303:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16366807	16366888	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001303;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001303;transcript_name=CHM13_chrY_T0001303;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001303:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16366889	16453733	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001303;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001303;transcript_name=CHM13_chrY_T0001303;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001303:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16453734	16453874	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001303;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001303;transcript_name=CHM13_chrY_T0001303;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001303:2;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16453875	16456126	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001303;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001303;transcript_name=CHM13_chrY_T0001303;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001303:2;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16456127	16456248	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001303;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001303;transcript_name=CHM13_chrY_T0001303;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001303:3;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16456249	16473282	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001303;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001303;transcript_name=CHM13_chrY_T0001303;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001303:3;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16473283	16473419	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001303;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001303;transcript_name=CHM13_chrY_T0001303;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001303:4;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16473420	16475543	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001303;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001303;transcript_name=CHM13_chrY_T0001303;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001303:4;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16475544	16475660	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001303;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001303;transcript_name=CHM13_chrY_T0001303;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001303:5;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	16362546	16368196	1000	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001304;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_G0000432;transcript_name=CHM13_chrY_T0001304;gene_name=ENSG00000295583;ID=CHM13_chrY_T0001304;Name=ENSG00000295583
CHM13_chrY	CAT	exon	16362546	16362582	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001304;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001304;transcript_name=CHM13_chrY_T0001304;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001304:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16362583	16366806	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001304;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001304;transcript_name=CHM13_chrY_T0001304;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001304:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16366807	16366888	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001304;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001304;transcript_name=CHM13_chrY_T0001304;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001304:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16366889	16367211	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001304;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001304;transcript_name=CHM13_chrY_T0001304;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001304:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16367212	16368196	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001304;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001304;transcript_name=CHM13_chrY_T0001304;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001304:2;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	16362554	16367021	1000	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001305;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_G0000432;transcript_name=CHM13_chrY_T0001305;gene_name=ENSG00000295583;ID=CHM13_chrY_T0001305;Name=ENSG00000295583
CHM13_chrY	CAT	exon	16362554	16363354	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001305;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001305;transcript_name=CHM13_chrY_T0001305;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001305:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16363355	16366806	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001305;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001305;transcript_name=CHM13_chrY_T0001305;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001305:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16366807	16367021	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001305;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001305;transcript_name=CHM13_chrY_T0001305;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001305:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	16362719	16368196	1000	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001306;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_G0000432;transcript_name=CHM13_chrY_T0001306;gene_name=ENSG00000295583;ID=CHM13_chrY_T0001306;Name=ENSG00000295583
CHM13_chrY	CAT	exon	16362719	16363354	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001306;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001306;transcript_name=CHM13_chrY_T0001306;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001306:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16363355	16366806	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001306;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001306;transcript_name=CHM13_chrY_T0001306;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001306:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16366807	16366888	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001306;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001306;transcript_name=CHM13_chrY_T0001306;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001306:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16366889	16367211	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001306;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001306;transcript_name=CHM13_chrY_T0001306;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001306:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16367212	16368196	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001306;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001306;transcript_name=CHM13_chrY_T0001306;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001306:2;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	16362849	16367348	1000	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001307;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_G0000432;transcript_name=CHM13_chrY_T0001307;gene_name=ENSG00000295583;ID=CHM13_chrY_T0001307;Name=ENSG00000295583
CHM13_chrY	CAT	exon	16362849	16362998	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001307;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001307;transcript_name=CHM13_chrY_T0001307;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001307:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16362999	16366806	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001307;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001307;transcript_name=CHM13_chrY_T0001307;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001307:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16366807	16366888	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001307;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001307;transcript_name=CHM13_chrY_T0001307;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001307:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16366889	16367211	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001307;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001307;transcript_name=CHM13_chrY_T0001307;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001307:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16367212	16367348	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001307;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001307;transcript_name=CHM13_chrY_T0001307;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001307:2;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	16362849	16363891	1000	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001308;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_G0000432;transcript_name=CHM13_chrY_T0001308;gene_name=ENSG00000295583;ID=CHM13_chrY_T0001308;Name=ENSG00000295583
CHM13_chrY	CAT	exon	16362849	16363354	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001308;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001308;transcript_name=CHM13_chrY_T0001308;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001308:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16363355	16363438	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001308;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001308;transcript_name=CHM13_chrY_T0001308;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001308:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16363439	16363891	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001308;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001308;transcript_name=CHM13_chrY_T0001308;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001308:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	16362853	16367021	1000	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001309;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_G0000432;transcript_name=CHM13_chrY_T0001309;gene_name=ENSG00000295583;ID=CHM13_chrY_T0001309;Name=ENSG00000295583
CHM13_chrY	CAT	exon	16362853	16363354	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001309;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001309;transcript_name=CHM13_chrY_T0001309;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001309:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16363355	16366476	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001309;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001309;transcript_name=CHM13_chrY_T0001309;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001309:0;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16366477	16366596	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001309;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001309;transcript_name=CHM13_chrY_T0001309;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001309:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16366597	16366806	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001309;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001309;transcript_name=CHM13_chrY_T0001309;gene_name=ENSG00000295583;ID=intron:CHM13_chrY_T0001309:1;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16366807	16367021	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=CHM13_chrY_T0001309;gene_id=CHM13_chrY_G0000432;Parent=CHM13_chrY_T0001309;transcript_name=CHM13_chrY_T0001309;gene_name=ENSG00000295583;ID=exon:CHM13_chrY_T0001309:2;Name=ENSG00000295583;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	16453732	16499846	.	+	.	source_gene_common_name=STSP1;source_gene=ENSG00000227166.1;gene_id=CHM13_chrY_G0000433;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=STSP1;gene_sources=liftoff;ID=CHM13_chrY_G0000433;Name=STSP1
CHM13_chrY	CAT	transcript	16453732	16499846	1000	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=CHM13_chrY_T0001310;gene_id=CHM13_chrY_G0000433;Parent=CHM13_chrY_G0000433;transcript_name=CHM13_chrY_T0001310;gene_name=STSP1;ID=CHM13_chrY_T0001310;Name=STSP1
CHM13_chrY	CAT	exon	16453732	16453874	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=CHM13_chrY_T0001310;gene_id=CHM13_chrY_G0000433;Parent=CHM13_chrY_T0001310;transcript_name=CHM13_chrY_T0001310;gene_name=STSP1;ID=exon:CHM13_chrY_T0001310:0;Name=STSP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16453875	16456126	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=CHM13_chrY_T0001310;gene_id=CHM13_chrY_G0000433;Parent=CHM13_chrY_T0001310;transcript_name=CHM13_chrY_T0001310;gene_name=STSP1;ID=intron:CHM13_chrY_T0001310:0;Name=STSP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16456127	16456457	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=CHM13_chrY_T0001310;gene_id=CHM13_chrY_G0000433;Parent=CHM13_chrY_T0001310;transcript_name=CHM13_chrY_T0001310;gene_name=STSP1;ID=exon:CHM13_chrY_T0001310:1;Name=STSP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16456458	16458094	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=CHM13_chrY_T0001310;gene_id=CHM13_chrY_G0000433;Parent=CHM13_chrY_T0001310;transcript_name=CHM13_chrY_T0001310;gene_name=STSP1;ID=intron:CHM13_chrY_T0001310:1;Name=STSP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16458095	16458513	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=CHM13_chrY_T0001310;gene_id=CHM13_chrY_G0000433;Parent=CHM13_chrY_T0001310;transcript_name=CHM13_chrY_T0001310;gene_name=STSP1;ID=exon:CHM13_chrY_T0001310:2;Name=STSP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16458514	16473282	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=CHM13_chrY_T0001310;gene_id=CHM13_chrY_G0000433;Parent=CHM13_chrY_T0001310;transcript_name=CHM13_chrY_T0001310;gene_name=STSP1;ID=intron:CHM13_chrY_T0001310:2;Name=STSP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16473283	16473439	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=CHM13_chrY_T0001310;gene_id=CHM13_chrY_G0000433;Parent=CHM13_chrY_T0001310;transcript_name=CHM13_chrY_T0001310;gene_name=STSP1;ID=exon:CHM13_chrY_T0001310:3;Name=STSP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16473440	16499745	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=CHM13_chrY_T0001310;gene_id=CHM13_chrY_G0000433;Parent=CHM13_chrY_T0001310;transcript_name=CHM13_chrY_T0001310;gene_name=STSP1;ID=intron:CHM13_chrY_T0001310:3;Name=STSP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16499746	16499846	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=CHM13_chrY_T0001310;gene_id=CHM13_chrY_G0000433;Parent=CHM13_chrY_T0001310;transcript_name=CHM13_chrY_T0001310;gene_name=STSP1;ID=exon:CHM13_chrY_T0001310:4;Name=STSP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	16596830	16604751	.	-	.	source_gene_common_name=ENSG00000295335;source_gene=ENSG00000295335.1;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;gene_id=CHM13_chrY_G0000434;gene_biotype=lncRNA;gene_name=ENSG00000295335;gene_sources=liftoff;ID=CHM13_chrY_G0000434;Name=ENSG00000295335
CHM13_chrY	CAT	transcript	16596830	16604751	1000	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=CHM13_chrY_T0001311;gene_id=CHM13_chrY_G0000434;Parent=CHM13_chrY_G0000434;transcript_name=CHM13_chrY_T0001311;gene_name=ENSG00000295335;ID=CHM13_chrY_T0001311;Name=ENSG00000295335
CHM13_chrY	CAT	exon	16596830	16597184	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=CHM13_chrY_T0001311;gene_id=CHM13_chrY_G0000434;Parent=CHM13_chrY_T0001311;transcript_name=CHM13_chrY_T0001311;gene_name=ENSG00000295335;ID=exon:CHM13_chrY_T0001311:0;Name=ENSG00000295335;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16597185	16604707	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=CHM13_chrY_T0001311;gene_id=CHM13_chrY_G0000434;Parent=CHM13_chrY_T0001311;transcript_name=CHM13_chrY_T0001311;gene_name=ENSG00000295335;ID=intron:CHM13_chrY_T0001311:0;Name=ENSG00000295335;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	16604708	16604751	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=CHM13_chrY_T0001311;gene_id=CHM13_chrY_G0000434;Parent=CHM13_chrY_T0001311;transcript_name=CHM13_chrY_T0001311;gene_name=ENSG00000295335;ID=exon:CHM13_chrY_T0001311:1;Name=ENSG00000295335;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	16964459	17031350	.	-	.	source_gene_common_name=ENSG00000300212;source_gene=ENSG00000300212.1;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;gene_id=CHM13_chrY_G0000435;gene_biotype=lncRNA;gene_name=ENSG00000300212;gene_sources=liftoff;ID=CHM13_chrY_G0000435;Name=ENSG00000300212
CHM13_chrY	CAT	transcript	16964459	17031350	1000	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=CHM13_chrY_T0001312;gene_id=CHM13_chrY_G0000435;Parent=CHM13_chrY_G0000435;transcript_name=CHM13_chrY_T0001312;gene_name=ENSG00000300212;ID=CHM13_chrY_T0001312;Name=ENSG00000300212
CHM13_chrY	CAT	exon	16964459	16965156	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=CHM13_chrY_T0001312;gene_id=CHM13_chrY_G0000435;Parent=CHM13_chrY_T0001312;transcript_name=CHM13_chrY_T0001312;gene_name=ENSG00000300212;ID=exon:CHM13_chrY_T0001312:0;Name=ENSG00000300212;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	16965157	17028989	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=CHM13_chrY_T0001312;gene_id=CHM13_chrY_G0000435;Parent=CHM13_chrY_T0001312;transcript_name=CHM13_chrY_T0001312;gene_name=ENSG00000300212;ID=intron:CHM13_chrY_T0001312:0;Name=ENSG00000300212;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	17028990	17029134	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=CHM13_chrY_T0001312;gene_id=CHM13_chrY_G0000435;Parent=CHM13_chrY_T0001312;transcript_name=CHM13_chrY_T0001312;gene_name=ENSG00000300212;ID=exon:CHM13_chrY_T0001312:1;Name=ENSG00000300212;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	17029135	17030675	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=CHM13_chrY_T0001312;gene_id=CHM13_chrY_G0000435;Parent=CHM13_chrY_T0001312;transcript_name=CHM13_chrY_T0001312;gene_name=ENSG00000300212;ID=intron:CHM13_chrY_T0001312:1;Name=ENSG00000300212;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	17030676	17030855	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=CHM13_chrY_T0001312;gene_id=CHM13_chrY_G0000435;Parent=CHM13_chrY_T0001312;transcript_name=CHM13_chrY_T0001312;gene_name=ENSG00000300212;ID=exon:CHM13_chrY_T0001312:2;Name=ENSG00000300212;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	17030856	17031075	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=CHM13_chrY_T0001312;gene_id=CHM13_chrY_G0000435;Parent=CHM13_chrY_T0001312;transcript_name=CHM13_chrY_T0001312;gene_name=ENSG00000300212;ID=intron:CHM13_chrY_T0001312:2;Name=ENSG00000300212;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	17031076	17031350	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=CHM13_chrY_T0001312;gene_id=CHM13_chrY_G0000435;Parent=CHM13_chrY_T0001312;transcript_name=CHM13_chrY_T0001312;gene_name=ENSG00000300212;ID=exon:CHM13_chrY_T0001312:3;Name=ENSG00000300212;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	17044788	17044919	.	-	.	source_gene_common_name=ENSG00000252689;source_gene=ENSG00000252689.1;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;gene_id=CHM13_chrY_G0000436;gene_biotype=snoRNA;gene_name=ENSG00000252689;gene_sources=liftoff;ID=CHM13_chrY_G0000436;Name=ENSG00000252689
CHM13_chrY	CAT	transcript	17044788	17044919	1000	-	.	source_transcript=ENST00000516880.1;source_transcript_name=ENST00000516880;source_gene=ENSG00000252689.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000252689.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516880.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516880.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000252689;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;transcript_id=CHM13_chrY_T0001313;gene_id=CHM13_chrY_G0000436;Parent=CHM13_chrY_G0000436;transcript_name=CHM13_chrY_T0001313;gene_name=ENSG00000252689;ID=CHM13_chrY_T0001313;Name=ENSG00000252689
CHM13_chrY	CAT	exon	17044788	17044919	.	-	.	source_transcript=ENST00000516880.1;source_transcript_name=ENST00000516880;source_gene=ENSG00000252689.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000252689.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516880.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516880.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000252689;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;transcript_id=CHM13_chrY_T0001313;gene_id=CHM13_chrY_G0000436;Parent=CHM13_chrY_T0001313;transcript_name=CHM13_chrY_T0001313;gene_name=ENSG00000252689;ID=exon:CHM13_chrY_T0001313:0;Name=ENSG00000252689;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	17092686	17097845	.	+	.	source_gene_common_name=ENSG00000309341;source_gene=ENSG00000309341.1;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;gene_id=CHM13_chrY_G0000437;gene_biotype=lncRNA;gene_name=ENSG00000309341;gene_sources=liftoff;ID=CHM13_chrY_G0000437;Name=ENSG00000309341
CHM13_chrY	CAT	transcript	17092686	17097845	1000	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=CHM13_chrY_T0001314;gene_id=CHM13_chrY_G0000437;Parent=CHM13_chrY_G0000437;transcript_name=CHM13_chrY_T0001314;gene_name=ENSG00000309341;ID=CHM13_chrY_T0001314;Name=ENSG00000309341
CHM13_chrY	CAT	exon	17092686	17092841	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=CHM13_chrY_T0001314;gene_id=CHM13_chrY_G0000437;Parent=CHM13_chrY_T0001314;transcript_name=CHM13_chrY_T0001314;gene_name=ENSG00000309341;ID=exon:CHM13_chrY_T0001314:0;Name=ENSG00000309341;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	17092842	17097670	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=CHM13_chrY_T0001314;gene_id=CHM13_chrY_G0000437;Parent=CHM13_chrY_T0001314;transcript_name=CHM13_chrY_T0001314;gene_name=ENSG00000309341;ID=intron:CHM13_chrY_T0001314:0;Name=ENSG00000309341;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	17097671	17097845	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=CHM13_chrY_T0001314;gene_id=CHM13_chrY_G0000437;Parent=CHM13_chrY_T0001314;transcript_name=CHM13_chrY_T0001314;gene_name=ENSG00000309341;ID=exon:CHM13_chrY_T0001314:1;Name=ENSG00000309341;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	17155499	17155605	.	+	.	source_gene_common_name=RNU6-109P;source_gene=ENSG00000252173.1;alternative_source_transcripts=ENST00000516364.1,ENST00000516364.1;gene_id=CHM13_chrY_G0000438;gene_biotype=snRNA;gene_name=RNU6-109P;gene_sources=liftoff;ID=CHM13_chrY_G0000438;Name=RNU6-109P
CHM13_chrY	CAT	transcript	17155499	17155605	1000	+	.	source_transcript=ENST00000516364.1;source_transcript_name=RNU6-109P-201;source_gene=ENSG00000252173.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252173.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516364.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-109P;alternative_source_transcripts=ENST00000516364.1,ENST00000516364.1;transcript_id=CHM13_chrY_T0001315;gene_id=CHM13_chrY_G0000438;Parent=CHM13_chrY_G0000438;transcript_name=CHM13_chrY_T0001315;gene_name=RNU6-109P;ID=CHM13_chrY_T0001315;Name=RNU6-109P
CHM13_chrY	CAT	exon	17155499	17155605	.	+	.	source_transcript=ENST00000516364.1;source_transcript_name=RNU6-109P-201;source_gene=ENSG00000252173.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252173.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516364.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-109P;alternative_source_transcripts=ENST00000516364.1,ENST00000516364.1;transcript_id=CHM13_chrY_T0001315;gene_id=CHM13_chrY_G0000438;Parent=CHM13_chrY_T0001315;transcript_name=CHM13_chrY_T0001315;gene_name=RNU6-109P;ID=exon:CHM13_chrY_T0001315:0;Name=RNU6-109P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	17242831	17242937	.	-	.	source_gene_common_name=RNU6-184P;source_gene=ENSG00000252323.1;alternative_source_transcripts=ENST00000516514.1,ENST00000516514.1;gene_id=CHM13_chrY_G0000439;gene_biotype=snRNA;gene_name=RNU6-184P;gene_sources=liftoff;ID=CHM13_chrY_G0000439;Name=RNU6-184P
CHM13_chrY	CAT	transcript	17242831	17242937	1000	-	.	source_transcript=ENST00000516514.1;source_transcript_name=RNU6-184P-201;source_gene=ENSG00000252323.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252323.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516514.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-184P;alternative_source_transcripts=ENST00000516514.1,ENST00000516514.1;transcript_id=CHM13_chrY_T0001316;gene_id=CHM13_chrY_G0000439;Parent=CHM13_chrY_G0000439;transcript_name=CHM13_chrY_T0001316;gene_name=RNU6-184P;ID=CHM13_chrY_T0001316;Name=RNU6-184P
CHM13_chrY	CAT	exon	17242831	17242937	.	-	.	source_transcript=ENST00000516514.1;source_transcript_name=RNU6-184P-201;source_gene=ENSG00000252323.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252323.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516514.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-184P;alternative_source_transcripts=ENST00000516514.1,ENST00000516514.1;transcript_id=CHM13_chrY_T0001316;gene_id=CHM13_chrY_G0000439;Parent=CHM13_chrY_T0001316;transcript_name=CHM13_chrY_T0001316;gene_name=RNU6-184P;ID=exon:CHM13_chrY_T0001316:0;Name=RNU6-184P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	17300587	17305746	.	-	.	source_gene_common_name=ENSG00000309341;source_gene=ENSG00000309341.1;gene_id=CHM13_chrY_G0000440;gene_biotype=lncRNA;gene_name=ENSG00000309341;gene_sources=liftoff;ID=CHM13_chrY_G0000440;Name=ENSG00000309341
CHM13_chrY	CAT	transcript	17300587	17305746	1000	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=CHM13_chrY_T0001317;gene_id=CHM13_chrY_G0000440;Parent=CHM13_chrY_G0000440;transcript_name=CHM13_chrY_T0001317;gene_name=ENSG00000309341;ID=CHM13_chrY_T0001317;Name=ENSG00000309341
CHM13_chrY	CAT	exon	17300587	17300761	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=CHM13_chrY_T0001317;gene_id=CHM13_chrY_G0000440;Parent=CHM13_chrY_T0001317;transcript_name=CHM13_chrY_T0001317;gene_name=ENSG00000309341;ID=exon:CHM13_chrY_T0001317:0;Name=ENSG00000309341;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	17300762	17305590	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=CHM13_chrY_T0001317;gene_id=CHM13_chrY_G0000440;Parent=CHM13_chrY_T0001317;transcript_name=CHM13_chrY_T0001317;gene_name=ENSG00000309341;ID=intron:CHM13_chrY_T0001317:0;Name=ENSG00000309341;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	17305591	17305746	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=CHM13_chrY_T0001317;gene_id=CHM13_chrY_G0000440;Parent=CHM13_chrY_T0001317;transcript_name=CHM13_chrY_T0001317;gene_name=ENSG00000309341;ID=exon:CHM13_chrY_T0001317:1;Name=ENSG00000309341;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	17506288	17551088	.	-	.	source_gene_common_name=ENSG00000286201;source_gene=ENSG00000286201.2;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;gene_id=CHM13_chrY_G0000441;gene_biotype=lncRNA;gene_name=ENSG00000286201;gene_sources=liftoff;ID=CHM13_chrY_G0000441;Name=ENSG00000286201
CHM13_chrY	CAT	transcript	17506288	17551088	1000	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=CHM13_chrY_T0001318;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_G0000441;transcript_name=CHM13_chrY_T0001318;gene_name=ENSG00000286201;ID=CHM13_chrY_T0001318;Name=ENSG00000286201
CHM13_chrY	CAT	exon	17506288	17512401	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=CHM13_chrY_T0001318;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_T0001318;transcript_name=CHM13_chrY_T0001318;gene_name=ENSG00000286201;ID=exon:CHM13_chrY_T0001318:0;Name=ENSG00000286201;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	17512402	17535095	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=CHM13_chrY_T0001318;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_T0001318;transcript_name=CHM13_chrY_T0001318;gene_name=ENSG00000286201;ID=intron:CHM13_chrY_T0001318:0;Name=ENSG00000286201;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	17535096	17535138	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=CHM13_chrY_T0001318;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_T0001318;transcript_name=CHM13_chrY_T0001318;gene_name=ENSG00000286201;ID=exon:CHM13_chrY_T0001318:1;Name=ENSG00000286201;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	17535139	17550592	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=CHM13_chrY_T0001318;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_T0001318;transcript_name=CHM13_chrY_T0001318;gene_name=ENSG00000286201;ID=intron:CHM13_chrY_T0001318:1;Name=ENSG00000286201;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	17550593	17551088	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=CHM13_chrY_T0001318;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_T0001318;transcript_name=CHM13_chrY_T0001318;gene_name=ENSG00000286201;ID=exon:CHM13_chrY_T0001318:2;Name=ENSG00000286201;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	17507697	17535245	1000	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=CHM13_chrY_T0001319;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_G0000441;transcript_name=CHM13_chrY_T0001319;gene_name=ENSG00000286201;ID=CHM13_chrY_T0001319;Name=ENSG00000286201
CHM13_chrY	CAT	exon	17507697	17508142	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=CHM13_chrY_T0001319;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_T0001319;transcript_name=CHM13_chrY_T0001319;gene_name=ENSG00000286201;ID=exon:CHM13_chrY_T0001319:0;Name=ENSG00000286201;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	17508143	17512284	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=CHM13_chrY_T0001319;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_T0001319;transcript_name=CHM13_chrY_T0001319;gene_name=ENSG00000286201;ID=intron:CHM13_chrY_T0001319:0;Name=ENSG00000286201;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	17512285	17512401	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=CHM13_chrY_T0001319;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_T0001319;transcript_name=CHM13_chrY_T0001319;gene_name=ENSG00000286201;ID=exon:CHM13_chrY_T0001319:1;Name=ENSG00000286201;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	17512402	17526028	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=CHM13_chrY_T0001319;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_T0001319;transcript_name=CHM13_chrY_T0001319;gene_name=ENSG00000286201;ID=intron:CHM13_chrY_T0001319:1;Name=ENSG00000286201;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	17526029	17526120	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=CHM13_chrY_T0001319;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_T0001319;transcript_name=CHM13_chrY_T0001319;gene_name=ENSG00000286201;ID=exon:CHM13_chrY_T0001319:2;Name=ENSG00000286201;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	17526121	17535095	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=CHM13_chrY_T0001319;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_T0001319;transcript_name=CHM13_chrY_T0001319;gene_name=ENSG00000286201;ID=intron:CHM13_chrY_T0001319:2;Name=ENSG00000286201;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	17535096	17535245	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=CHM13_chrY_T0001319;gene_id=CHM13_chrY_G0000441;Parent=CHM13_chrY_T0001319;transcript_name=CHM13_chrY_T0001319;gene_name=ENSG00000286201;ID=exon:CHM13_chrY_T0001319:3;Name=ENSG00000286201;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18099343	18100169	.	+	.	source_gene_common_name=SURF6P1;source_gene=ENSG00000228518.1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;gene_id=CHM13_chrY_G0000442;gene_biotype=processed_pseudogene;gene_name=SURF6P1;gene_sources=liftoff;ID=CHM13_chrY_G0000442;Name=SURF6P1
CHM13_chrY	CAT	transcript	18099343	18100169	1000	+	.	source_transcript=ENST00000451854.1;source_transcript_name=SURF6P1-201;source_gene=ENSG00000228518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451854.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451854.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SURF6P1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;transcript_id=CHM13_chrY_T0001320;gene_id=CHM13_chrY_G0000442;Parent=CHM13_chrY_G0000442;transcript_name=CHM13_chrY_T0001320;gene_name=SURF6P1;ID=CHM13_chrY_T0001320;Name=SURF6P1
CHM13_chrY	CAT	exon	18099343	18100169	.	+	.	source_transcript=ENST00000451854.1;source_transcript_name=SURF6P1-201;source_gene=ENSG00000228518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451854.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451854.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SURF6P1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;transcript_id=CHM13_chrY_T0001320;gene_id=CHM13_chrY_G0000442;Parent=CHM13_chrY_T0001320;transcript_name=CHM13_chrY_T0001320;gene_name=SURF6P1;ID=exon:CHM13_chrY_T0001320:0;Name=SURF6P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18371406	18371741	.	-	.	source_gene_common_name=ELOCP35;source_gene=ENSG00000271595.1;alternative_source_transcripts=ENST00000604289.1,ENST00000604289.1;gene_id=CHM13_chrY_G0000443;gene_biotype=processed_pseudogene;gene_name=ELOCP35;gene_sources=liftoff;ID=CHM13_chrY_G0000443;Name=ELOCP35
CHM13_chrY	CAT	transcript	18371406	18371741	1000	-	.	source_transcript=ENST00000604289.1;source_transcript_name=ELOCP35-201;source_gene=ENSG00000271595.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271595.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604289.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP35;alternative_source_transcripts=ENST00000604289.1,ENST00000604289.1;transcript_id=CHM13_chrY_T0001321;gene_id=CHM13_chrY_G0000443;Parent=CHM13_chrY_G0000443;transcript_name=CHM13_chrY_T0001321;gene_name=ELOCP35;ID=CHM13_chrY_T0001321;Name=ELOCP35
CHM13_chrY	CAT	exon	18371406	18371741	.	-	.	source_transcript=ENST00000604289.1;source_transcript_name=ELOCP35-201;source_gene=ENSG00000271595.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271595.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604289.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP35;alternative_source_transcripts=ENST00000604289.1,ENST00000604289.1;transcript_id=CHM13_chrY_T0001321;gene_id=CHM13_chrY_G0000443;Parent=CHM13_chrY_T0001321;transcript_name=CHM13_chrY_T0001321;gene_name=ELOCP35;ID=exon:CHM13_chrY_T0001321:0;Name=ELOCP35;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18407502	18423705	.	+	.	source_gene_common_name=FAM41AY2;source_gene=ENSG00000290726.3;gene_id=CHM13_chrY_G0000444;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=CHM13_chrY_G0000444;Name=FAM41AY2
CHM13_chrY	CAT	transcript	18407502	18421554	1000	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_G0000444;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=CHM13_chrY_T0001322;Name=FAM41AY2
CHM13_chrY	CAT	exon	18407502	18407659	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001322;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=exon:CHM13_chrY_T0001322:0;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18407660	18408254	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001322;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=intron:CHM13_chrY_T0001322:0;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18408255	18408304	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001322;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=exon:CHM13_chrY_T0001322:1;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18408305	18419633	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001322;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=intron:CHM13_chrY_T0001322:1;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18419634	18419762	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001322;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=exon:CHM13_chrY_T0001322:2;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18419763	18420009	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001322;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=intron:CHM13_chrY_T0001322:2;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18420010	18420103	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001322;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=exon:CHM13_chrY_T0001322:3;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18420104	18420696	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001322;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=intron:CHM13_chrY_T0001322:3;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18420697	18420867	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001322;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=exon:CHM13_chrY_T0001322:4;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18420868	18420976	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001322;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=intron:CHM13_chrY_T0001322:4;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18420977	18421070	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001322;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=exon:CHM13_chrY_T0001322:5;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18421071	18421344	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001322;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=intron:CHM13_chrY_T0001322:5;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18421345	18421554	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001322;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001322;transcript_name=CHM13_chrY_T0001322;gene_name=FAM41AY2;ID=exon:CHM13_chrY_T0001322:6;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18421424	18423705	1000	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001324;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_G0000444;transcript_name=CHM13_chrY_T0001324;gene_name=FAM41AY2;ID=CHM13_chrY_T0001324;Name=FAM41AY2
CHM13_chrY	CAT	exon	18421424	18421554	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001324;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001324;transcript_name=CHM13_chrY_T0001324;gene_name=FAM41AY2;ID=exon:CHM13_chrY_T0001324:0;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18421555	18422247	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001324;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001324;transcript_name=CHM13_chrY_T0001324;gene_name=FAM41AY2;ID=intron:CHM13_chrY_T0001324:0;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18422248	18422469	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001324;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001324;transcript_name=CHM13_chrY_T0001324;gene_name=FAM41AY2;ID=exon:CHM13_chrY_T0001324:1;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18422470	18422551	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001324;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001324;transcript_name=CHM13_chrY_T0001324;gene_name=FAM41AY2;ID=intron:CHM13_chrY_T0001324:1;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18422552	18423705	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=CHM13_chrY_T0001324;gene_id=CHM13_chrY_G0000444;Parent=CHM13_chrY_T0001324;transcript_name=CHM13_chrY_T0001324;gene_name=FAM41AY2;ID=exon:CHM13_chrY_T0001324:2;Name=FAM41AY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18421038	18423251	.	+	.	source_gene_common_name=ENSG00000282909;source_gene=ENSG00000282909.3;gene_id=CHM13_chrY_G0000445;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000282909;gene_sources=liftoff;ID=CHM13_chrY_G0000445;Name=ENSG00000282909
CHM13_chrY	CAT	transcript	18421038	18423251	1000	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=CHM13_chrY_T0001323;gene_id=CHM13_chrY_G0000445;Parent=CHM13_chrY_G0000445;transcript_name=CHM13_chrY_T0001323;gene_name=ENSG00000282909;ID=CHM13_chrY_T0001323;Name=ENSG00000282909
CHM13_chrY	CAT	exon	18421038	18421246	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=CHM13_chrY_T0001323;gene_id=CHM13_chrY_G0000445;Parent=CHM13_chrY_T0001323;transcript_name=CHM13_chrY_T0001323;gene_name=ENSG00000282909;ID=exon:CHM13_chrY_T0001323:0;Name=ENSG00000282909;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18421247	18421289	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=CHM13_chrY_T0001323;gene_id=CHM13_chrY_G0000445;Parent=CHM13_chrY_T0001323;transcript_name=CHM13_chrY_T0001323;gene_name=ENSG00000282909;ID=intron:CHM13_chrY_T0001323:0;Name=ENSG00000282909;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18421290	18421554	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=CHM13_chrY_T0001323;gene_id=CHM13_chrY_G0000445;Parent=CHM13_chrY_T0001323;transcript_name=CHM13_chrY_T0001323;gene_name=ENSG00000282909;ID=exon:CHM13_chrY_T0001323:1;Name=ENSG00000282909;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18421555	18421643	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=CHM13_chrY_T0001323;gene_id=CHM13_chrY_G0000445;Parent=CHM13_chrY_T0001323;transcript_name=CHM13_chrY_T0001323;gene_name=ENSG00000282909;ID=intron:CHM13_chrY_T0001323:1;Name=ENSG00000282909;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18421644	18421763	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=CHM13_chrY_T0001323;gene_id=CHM13_chrY_G0000445;Parent=CHM13_chrY_T0001323;transcript_name=CHM13_chrY_T0001323;gene_name=ENSG00000282909;ID=exon:CHM13_chrY_T0001323:2;Name=ENSG00000282909;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18421764	18422088	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=CHM13_chrY_T0001323;gene_id=CHM13_chrY_G0000445;Parent=CHM13_chrY_T0001323;transcript_name=CHM13_chrY_T0001323;gene_name=ENSG00000282909;ID=intron:CHM13_chrY_T0001323:2;Name=ENSG00000282909;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18422089	18422183	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=CHM13_chrY_T0001323;gene_id=CHM13_chrY_G0000445;Parent=CHM13_chrY_T0001323;transcript_name=CHM13_chrY_T0001323;gene_name=ENSG00000282909;ID=exon:CHM13_chrY_T0001323:3;Name=ENSG00000282909;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18422184	18422551	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=CHM13_chrY_T0001323;gene_id=CHM13_chrY_G0000445;Parent=CHM13_chrY_T0001323;transcript_name=CHM13_chrY_T0001323;gene_name=ENSG00000282909;ID=intron:CHM13_chrY_T0001323:3;Name=ENSG00000282909;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18422552	18422668	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=CHM13_chrY_T0001323;gene_id=CHM13_chrY_G0000445;Parent=CHM13_chrY_T0001323;transcript_name=CHM13_chrY_T0001323;gene_name=ENSG00000282909;ID=exon:CHM13_chrY_T0001323:4;Name=ENSG00000282909;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18422669	18423124	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=CHM13_chrY_T0001323;gene_id=CHM13_chrY_G0000445;Parent=CHM13_chrY_T0001323;transcript_name=CHM13_chrY_T0001323;gene_name=ENSG00000282909;ID=intron:CHM13_chrY_T0001323:4;Name=ENSG00000282909;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18423125	18423251	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=CHM13_chrY_T0001323;gene_id=CHM13_chrY_G0000445;Parent=CHM13_chrY_T0001323;transcript_name=CHM13_chrY_T0001323;gene_name=ENSG00000282909;ID=exon:CHM13_chrY_T0001323:5;Name=ENSG00000282909;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18423372	18425574	.	-	.	source_gene_common_name=TUBB1P2;source_gene=ENSG00000228578.1;alternative_source_transcripts=ENST00000422712.1;gene_id=CHM13_chrY_G0000446;gene_biotype=unprocessed_pseudogene;gene_name=TUBB1P2;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000446;Name=TUBB1P2
CHM13_chrY	CAT	transcript	18423372	18425574	1000	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;alternative_source_transcripts=ENST00000422712.1;transcript_id=CHM13_chrY_T0001325;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_G0000446;transcript_name=CHM13_chrY_T0001325;gene_name=TUBB1P2;ID=CHM13_chrY_T0001325;Name=TUBB1P2
CHM13_chrY	CAT	exon	18423372	18424420	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;alternative_source_transcripts=ENST00000422712.1;transcript_id=CHM13_chrY_T0001325;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_T0001325;transcript_name=CHM13_chrY_T0001325;gene_name=TUBB1P2;ID=exon:CHM13_chrY_T0001325:0;Name=TUBB1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18424421	18424932	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;alternative_source_transcripts=ENST00000422712.1;transcript_id=CHM13_chrY_T0001325;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_T0001325;transcript_name=CHM13_chrY_T0001325;gene_name=TUBB1P2;ID=intron:CHM13_chrY_T0001325:0;Name=TUBB1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18424933	18425212	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;alternative_source_transcripts=ENST00000422712.1;transcript_id=CHM13_chrY_T0001325;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_T0001325;transcript_name=CHM13_chrY_T0001325;gene_name=TUBB1P2;ID=exon:CHM13_chrY_T0001325:1;Name=TUBB1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18425213	18425517	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;alternative_source_transcripts=ENST00000422712.1;transcript_id=CHM13_chrY_T0001325;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_T0001325;transcript_name=CHM13_chrY_T0001325;gene_name=TUBB1P2;ID=intron:CHM13_chrY_T0001325:1;Name=TUBB1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18425518	18425574	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;alternative_source_transcripts=ENST00000422712.1;transcript_id=CHM13_chrY_T0001325;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_T0001325;transcript_name=CHM13_chrY_T0001325;gene_name=TUBB1P2;ID=exon:CHM13_chrY_T0001325:2;Name=TUBB1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18423372	18425574	1000	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=CHM13_chrY_T0001326;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_G0000446;transcript_name=CHM13_chrY_T0001326;gene_name=TUBB1P2;ID=CHM13_chrY_T0001326;Name=TUBB1P2
CHM13_chrY	CAT	exon	18423372	18424420	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=CHM13_chrY_T0001326;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_T0001326;transcript_name=CHM13_chrY_T0001326;gene_name=TUBB1P2;ID=exon:CHM13_chrY_T0001326:0;Name=TUBB1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18424421	18424932	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=CHM13_chrY_T0001326;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_T0001326;transcript_name=CHM13_chrY_T0001326;gene_name=TUBB1P2;ID=intron:CHM13_chrY_T0001326:0;Name=TUBB1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18424933	18425023	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=CHM13_chrY_T0001326;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_T0001326;transcript_name=CHM13_chrY_T0001326;gene_name=TUBB1P2;ID=exon:CHM13_chrY_T0001326:1;Name=TUBB1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18425024	18425103	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=CHM13_chrY_T0001326;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_T0001326;transcript_name=CHM13_chrY_T0001326;gene_name=TUBB1P2;ID=intron:CHM13_chrY_T0001326:1;Name=TUBB1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18425104	18425212	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=CHM13_chrY_T0001326;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_T0001326;transcript_name=CHM13_chrY_T0001326;gene_name=TUBB1P2;ID=exon:CHM13_chrY_T0001326:2;Name=TUBB1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18425213	18425517	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=CHM13_chrY_T0001326;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_T0001326;transcript_name=CHM13_chrY_T0001326;gene_name=TUBB1P2;ID=intron:CHM13_chrY_T0001326:2;Name=TUBB1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18425518	18425574	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=CHM13_chrY_T0001326;gene_id=CHM13_chrY_G0000446;Parent=CHM13_chrY_T0001326;transcript_name=CHM13_chrY_T0001326;gene_name=TUBB1P2;ID=exon:CHM13_chrY_T0001326:3;Name=TUBB1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18458624	18486508	.	-	.	source_gene_common_name=FAM224B;source_gene=ENSG00000230663.2;alternative_source_transcripts=ENST00000729283.1,ENST00000729283.1;gene_id=CHM13_chrY_G0000447;gene_biotype=lncRNA;gene_name=FAM224B;gene_sources=liftoff;ID=CHM13_chrY_G0000447;Name=FAM224B
CHM13_chrY	CAT	transcript	18458624	18486413	1000	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1,ENST00000729283.1;transcript_id=CHM13_chrY_T0001327;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001327;gene_name=FAM224B;ID=CHM13_chrY_T0001327;Name=FAM224B
CHM13_chrY	CAT	exon	18458624	18458934	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1,ENST00000729283.1;transcript_id=CHM13_chrY_T0001327;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001327;transcript_name=CHM13_chrY_T0001327;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001327:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18458935	18483245	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1,ENST00000729283.1;transcript_id=CHM13_chrY_T0001327;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001327;transcript_name=CHM13_chrY_T0001327;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001327:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1,ENST00000729283.1;transcript_id=CHM13_chrY_T0001327;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001327;transcript_name=CHM13_chrY_T0001327;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001327:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1,ENST00000729283.1;transcript_id=CHM13_chrY_T0001327;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001327;transcript_name=CHM13_chrY_T0001327;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001327:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486413	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1,ENST00000729283.1;transcript_id=CHM13_chrY_T0001327;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001327;transcript_name=CHM13_chrY_T0001327;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001327:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18459339	18486302	1000	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1,ENST00000458667.1;transcript_id=CHM13_chrY_T0001328;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001328;gene_name=FAM224B;ID=CHM13_chrY_T0001328;Name=FAM224B
CHM13_chrY	CAT	exon	18459339	18460493	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1,ENST00000458667.1;transcript_id=CHM13_chrY_T0001328;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001328;transcript_name=CHM13_chrY_T0001328;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001328:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460494	18460580	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1,ENST00000458667.1;transcript_id=CHM13_chrY_T0001328;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001328;transcript_name=CHM13_chrY_T0001328;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001328:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460581	18460665	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1,ENST00000458667.1;transcript_id=CHM13_chrY_T0001328;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001328;transcript_name=CHM13_chrY_T0001328;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001328:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460666	18462314	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1,ENST00000458667.1;transcript_id=CHM13_chrY_T0001328;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001328;transcript_name=CHM13_chrY_T0001328;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001328:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18462315	18462549	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1,ENST00000458667.1;transcript_id=CHM13_chrY_T0001328;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001328;transcript_name=CHM13_chrY_T0001328;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001328:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18462550	18483245	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1,ENST00000458667.1;transcript_id=CHM13_chrY_T0001328;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001328;transcript_name=CHM13_chrY_T0001328;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001328:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1,ENST00000458667.1;transcript_id=CHM13_chrY_T0001328;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001328;transcript_name=CHM13_chrY_T0001328;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001328:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1,ENST00000458667.1;transcript_id=CHM13_chrY_T0001328;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001328;transcript_name=CHM13_chrY_T0001328;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001328:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486302	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1,ENST00000458667.1;transcript_id=CHM13_chrY_T0001328;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001328;transcript_name=CHM13_chrY_T0001328;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001328:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18459339	18486410	1000	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1,ENST00000729284.1;transcript_id=CHM13_chrY_T0001329;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001329;gene_name=FAM224B;ID=CHM13_chrY_T0001329;Name=FAM224B
CHM13_chrY	CAT	exon	18459339	18460493	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1,ENST00000729284.1;transcript_id=CHM13_chrY_T0001329;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001329;transcript_name=CHM13_chrY_T0001329;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001329:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460494	18460580	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1,ENST00000729284.1;transcript_id=CHM13_chrY_T0001329;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001329;transcript_name=CHM13_chrY_T0001329;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001329:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460581	18460665	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1,ENST00000729284.1;transcript_id=CHM13_chrY_T0001329;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001329;transcript_name=CHM13_chrY_T0001329;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001329:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460666	18483245	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1,ENST00000729284.1;transcript_id=CHM13_chrY_T0001329;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001329;transcript_name=CHM13_chrY_T0001329;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001329:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1,ENST00000729284.1;transcript_id=CHM13_chrY_T0001329;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001329;transcript_name=CHM13_chrY_T0001329;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001329:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1,ENST00000729284.1;transcript_id=CHM13_chrY_T0001329;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001329;transcript_name=CHM13_chrY_T0001329;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001329:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486410	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1,ENST00000729284.1;transcript_id=CHM13_chrY_T0001329;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001329;transcript_name=CHM13_chrY_T0001329;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001329:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18459342	18486386	1000	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1,ENST00000729285.1;transcript_id=CHM13_chrY_T0001330;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001330;gene_name=FAM224B;ID=CHM13_chrY_T0001330;Name=FAM224B
CHM13_chrY	CAT	exon	18459342	18460493	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1,ENST00000729285.1;transcript_id=CHM13_chrY_T0001330;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001330;transcript_name=CHM13_chrY_T0001330;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001330:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460494	18460580	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1,ENST00000729285.1;transcript_id=CHM13_chrY_T0001330;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001330;transcript_name=CHM13_chrY_T0001330;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001330:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460581	18460665	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1,ENST00000729285.1;transcript_id=CHM13_chrY_T0001330;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001330;transcript_name=CHM13_chrY_T0001330;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001330:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460666	18481780	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1,ENST00000729285.1;transcript_id=CHM13_chrY_T0001330;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001330;transcript_name=CHM13_chrY_T0001330;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001330:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18481781	18481910	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1,ENST00000729285.1;transcript_id=CHM13_chrY_T0001330;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001330;transcript_name=CHM13_chrY_T0001330;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001330:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1,ENST00000729285.1;transcript_id=CHM13_chrY_T0001330;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001330;transcript_name=CHM13_chrY_T0001330;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001330:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1,ENST00000729285.1;transcript_id=CHM13_chrY_T0001330;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001330;transcript_name=CHM13_chrY_T0001330;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001330:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1,ENST00000729285.1;transcript_id=CHM13_chrY_T0001330;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001330;transcript_name=CHM13_chrY_T0001330;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001330:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486386	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1,ENST00000729285.1;transcript_id=CHM13_chrY_T0001330;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001330;transcript_name=CHM13_chrY_T0001330;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001330:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18459821	18486381	1000	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=CHM13_chrY_T0001331;Name=FAM224B
CHM13_chrY	CAT	exon	18459821	18460493	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001331:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460494	18460580	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001331:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460581	18460665	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001331:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460666	18477939	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001331:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18477940	18477996	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001331:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18477997	18478421	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001331:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18478422	18478495	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001331:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18478496	18479289	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001331:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18479290	18479445	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001331:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18479446	18481780	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001331:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18481781	18481910	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001331:5;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001331:5;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001331:6;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001331:6;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486097	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001331:7;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18486098	18486213	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001331:7;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486381	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1,ENST00000729288.1;transcript_id=CHM13_chrY_T0001331;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001331;transcript_name=CHM13_chrY_T0001331;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001331:8;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18459833	18486422	1000	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1,ENST00000729286.1;transcript_id=CHM13_chrY_T0001332;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001332;gene_name=FAM224B;ID=CHM13_chrY_T0001332;Name=FAM224B
CHM13_chrY	CAT	exon	18459833	18460493	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1,ENST00000729286.1;transcript_id=CHM13_chrY_T0001332;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001332;transcript_name=CHM13_chrY_T0001332;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001332:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460494	18460580	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1,ENST00000729286.1;transcript_id=CHM13_chrY_T0001332;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001332;transcript_name=CHM13_chrY_T0001332;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001332:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460581	18460665	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1,ENST00000729286.1;transcript_id=CHM13_chrY_T0001332;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001332;transcript_name=CHM13_chrY_T0001332;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001332:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460666	18483245	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1,ENST00000729286.1;transcript_id=CHM13_chrY_T0001332;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001332;transcript_name=CHM13_chrY_T0001332;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001332:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1,ENST00000729286.1;transcript_id=CHM13_chrY_T0001332;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001332;transcript_name=CHM13_chrY_T0001332;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001332:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1,ENST00000729286.1;transcript_id=CHM13_chrY_T0001332;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001332;transcript_name=CHM13_chrY_T0001332;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001332:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486023	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1,ENST00000729286.1;transcript_id=CHM13_chrY_T0001332;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001332;transcript_name=CHM13_chrY_T0001332;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001332:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18486024	18486213	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1,ENST00000729286.1;transcript_id=CHM13_chrY_T0001332;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001332;transcript_name=CHM13_chrY_T0001332;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001332:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486422	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1,ENST00000729286.1;transcript_id=CHM13_chrY_T0001332;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001332;transcript_name=CHM13_chrY_T0001332;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001332:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18459833	18486359	1000	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1,ENST00000729290.1;transcript_id=CHM13_chrY_T0001333;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001333;gene_name=FAM224B;ID=CHM13_chrY_T0001333;Name=FAM224B
CHM13_chrY	CAT	exon	18459833	18460493	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1,ENST00000729290.1;transcript_id=CHM13_chrY_T0001333;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001333;transcript_name=CHM13_chrY_T0001333;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001333:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460494	18460580	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1,ENST00000729290.1;transcript_id=CHM13_chrY_T0001333;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001333;transcript_name=CHM13_chrY_T0001333;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001333:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460581	18460665	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1,ENST00000729290.1;transcript_id=CHM13_chrY_T0001333;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001333;transcript_name=CHM13_chrY_T0001333;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001333:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460666	18483245	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1,ENST00000729290.1;transcript_id=CHM13_chrY_T0001333;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001333;transcript_name=CHM13_chrY_T0001333;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001333:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483335	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1,ENST00000729290.1;transcript_id=CHM13_chrY_T0001333;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001333;transcript_name=CHM13_chrY_T0001333;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001333:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483336	18485863	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1,ENST00000729290.1;transcript_id=CHM13_chrY_T0001333;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001333;transcript_name=CHM13_chrY_T0001333;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001333:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486359	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1,ENST00000729290.1;transcript_id=CHM13_chrY_T0001333;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001333;transcript_name=CHM13_chrY_T0001333;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001333:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18459833	18486344	1000	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1,ENST00000729291.1;transcript_id=CHM13_chrY_T0001334;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001334;gene_name=FAM224B;ID=CHM13_chrY_T0001334;Name=FAM224B
CHM13_chrY	CAT	exon	18459833	18459892	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1,ENST00000729291.1;transcript_id=CHM13_chrY_T0001334;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001334;transcript_name=CHM13_chrY_T0001334;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001334:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18459893	18460366	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1,ENST00000729291.1;transcript_id=CHM13_chrY_T0001334;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001334;transcript_name=CHM13_chrY_T0001334;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001334:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460367	18460493	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1,ENST00000729291.1;transcript_id=CHM13_chrY_T0001334;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001334;transcript_name=CHM13_chrY_T0001334;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001334:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460494	18460580	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1,ENST00000729291.1;transcript_id=CHM13_chrY_T0001334;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001334;transcript_name=CHM13_chrY_T0001334;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001334:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460581	18460665	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1,ENST00000729291.1;transcript_id=CHM13_chrY_T0001334;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001334;transcript_name=CHM13_chrY_T0001334;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001334:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460666	18483245	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1,ENST00000729291.1;transcript_id=CHM13_chrY_T0001334;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001334;transcript_name=CHM13_chrY_T0001334;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001334:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1,ENST00000729291.1;transcript_id=CHM13_chrY_T0001334;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001334;transcript_name=CHM13_chrY_T0001334;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001334:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1,ENST00000729291.1;transcript_id=CHM13_chrY_T0001334;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001334;transcript_name=CHM13_chrY_T0001334;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001334:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486023	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1,ENST00000729291.1;transcript_id=CHM13_chrY_T0001334;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001334;transcript_name=CHM13_chrY_T0001334;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001334:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18486024	18486213	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1,ENST00000729291.1;transcript_id=CHM13_chrY_T0001334;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001334;transcript_name=CHM13_chrY_T0001334;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001334:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486344	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1,ENST00000729291.1;transcript_id=CHM13_chrY_T0001334;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001334;transcript_name=CHM13_chrY_T0001334;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001334:5;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18459835	18486383	1000	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1,ENST00000729289.1;transcript_id=CHM13_chrY_T0001335;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001335;gene_name=FAM224B;ID=CHM13_chrY_T0001335;Name=FAM224B
CHM13_chrY	CAT	exon	18459835	18460493	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1,ENST00000729289.1;transcript_id=CHM13_chrY_T0001335;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001335;transcript_name=CHM13_chrY_T0001335;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001335:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460494	18460580	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1,ENST00000729289.1;transcript_id=CHM13_chrY_T0001335;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001335;transcript_name=CHM13_chrY_T0001335;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001335:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460581	18460665	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1,ENST00000729289.1;transcript_id=CHM13_chrY_T0001335;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001335;transcript_name=CHM13_chrY_T0001335;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001335:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460666	18481780	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1,ENST00000729289.1;transcript_id=CHM13_chrY_T0001335;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001335;transcript_name=CHM13_chrY_T0001335;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001335:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18481781	18481910	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1,ENST00000729289.1;transcript_id=CHM13_chrY_T0001335;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001335;transcript_name=CHM13_chrY_T0001335;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001335:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1,ENST00000729289.1;transcript_id=CHM13_chrY_T0001335;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001335;transcript_name=CHM13_chrY_T0001335;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001335:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1,ENST00000729289.1;transcript_id=CHM13_chrY_T0001335;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001335;transcript_name=CHM13_chrY_T0001335;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001335:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1,ENST00000729289.1;transcript_id=CHM13_chrY_T0001335;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001335;transcript_name=CHM13_chrY_T0001335;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001335:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486023	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1,ENST00000729289.1;transcript_id=CHM13_chrY_T0001335;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001335;transcript_name=CHM13_chrY_T0001335;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001335:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18486024	18486213	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1,ENST00000729289.1;transcript_id=CHM13_chrY_T0001335;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001335;transcript_name=CHM13_chrY_T0001335;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001335:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486383	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1,ENST00000729289.1;transcript_id=CHM13_chrY_T0001335;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001335;transcript_name=CHM13_chrY_T0001335;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001335:5;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18459838	18486402	1000	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1,ENST00000729287.1;transcript_id=CHM13_chrY_T0001336;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001336;gene_name=FAM224B;ID=CHM13_chrY_T0001336;Name=FAM224B
CHM13_chrY	CAT	exon	18459838	18459892	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1,ENST00000729287.1;transcript_id=CHM13_chrY_T0001336;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001336;transcript_name=CHM13_chrY_T0001336;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001336:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18459893	18460366	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1,ENST00000729287.1;transcript_id=CHM13_chrY_T0001336;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001336;transcript_name=CHM13_chrY_T0001336;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001336:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460367	18460493	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1,ENST00000729287.1;transcript_id=CHM13_chrY_T0001336;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001336;transcript_name=CHM13_chrY_T0001336;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001336:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460494	18460580	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1,ENST00000729287.1;transcript_id=CHM13_chrY_T0001336;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001336;transcript_name=CHM13_chrY_T0001336;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001336:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460581	18460665	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1,ENST00000729287.1;transcript_id=CHM13_chrY_T0001336;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001336;transcript_name=CHM13_chrY_T0001336;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001336:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460666	18483245	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1,ENST00000729287.1;transcript_id=CHM13_chrY_T0001336;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001336;transcript_name=CHM13_chrY_T0001336;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001336:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1,ENST00000729287.1;transcript_id=CHM13_chrY_T0001336;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001336;transcript_name=CHM13_chrY_T0001336;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001336:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1,ENST00000729287.1;transcript_id=CHM13_chrY_T0001336;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001336;transcript_name=CHM13_chrY_T0001336;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001336:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486402	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1,ENST00000729287.1;transcript_id=CHM13_chrY_T0001336;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001336;transcript_name=CHM13_chrY_T0001336;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001336:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18460105	18486352	1000	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1,ENST00000729294.1;transcript_id=CHM13_chrY_T0001337;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001337;gene_name=FAM224B;ID=CHM13_chrY_T0001337;Name=FAM224B
CHM13_chrY	CAT	exon	18460105	18460493	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1,ENST00000729294.1;transcript_id=CHM13_chrY_T0001337;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001337;transcript_name=CHM13_chrY_T0001337;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001337:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460494	18460580	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1,ENST00000729294.1;transcript_id=CHM13_chrY_T0001337;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001337;transcript_name=CHM13_chrY_T0001337;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001337:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460581	18460665	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1,ENST00000729294.1;transcript_id=CHM13_chrY_T0001337;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001337;transcript_name=CHM13_chrY_T0001337;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001337:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460666	18481780	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1,ENST00000729294.1;transcript_id=CHM13_chrY_T0001337;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001337;transcript_name=CHM13_chrY_T0001337;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001337:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18481781	18481910	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1,ENST00000729294.1;transcript_id=CHM13_chrY_T0001337;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001337;transcript_name=CHM13_chrY_T0001337;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001337:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1,ENST00000729294.1;transcript_id=CHM13_chrY_T0001337;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001337;transcript_name=CHM13_chrY_T0001337;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001337:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1,ENST00000729294.1;transcript_id=CHM13_chrY_T0001337;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001337;transcript_name=CHM13_chrY_T0001337;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001337:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18484217	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1,ENST00000729294.1;transcript_id=CHM13_chrY_T0001337;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001337;transcript_name=CHM13_chrY_T0001337;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001337:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18484218	18484315	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1,ENST00000729294.1;transcript_id=CHM13_chrY_T0001337;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001337;transcript_name=CHM13_chrY_T0001337;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001337:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18484316	18486213	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1,ENST00000729294.1;transcript_id=CHM13_chrY_T0001337;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001337;transcript_name=CHM13_chrY_T0001337;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001337:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486352	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1,ENST00000729294.1;transcript_id=CHM13_chrY_T0001337;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001337;transcript_name=CHM13_chrY_T0001337;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001337:5;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18460107	18486358	1000	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1,ENST00000729293.1;transcript_id=CHM13_chrY_T0001338;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001338;gene_name=FAM224B;ID=CHM13_chrY_T0001338;Name=FAM224B
CHM13_chrY	CAT	exon	18460107	18460493	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1,ENST00000729293.1;transcript_id=CHM13_chrY_T0001338;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001338;transcript_name=CHM13_chrY_T0001338;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001338:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460494	18460580	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1,ENST00000729293.1;transcript_id=CHM13_chrY_T0001338;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001338;transcript_name=CHM13_chrY_T0001338;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001338:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460581	18460665	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1,ENST00000729293.1;transcript_id=CHM13_chrY_T0001338;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001338;transcript_name=CHM13_chrY_T0001338;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001338:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460666	18483245	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1,ENST00000729293.1;transcript_id=CHM13_chrY_T0001338;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001338;transcript_name=CHM13_chrY_T0001338;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001338:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1,ENST00000729293.1;transcript_id=CHM13_chrY_T0001338;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001338;transcript_name=CHM13_chrY_T0001338;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001338:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1,ENST00000729293.1;transcript_id=CHM13_chrY_T0001338;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001338;transcript_name=CHM13_chrY_T0001338;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001338:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486097	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1,ENST00000729293.1;transcript_id=CHM13_chrY_T0001338;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001338;transcript_name=CHM13_chrY_T0001338;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001338:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18486098	18486213	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1,ENST00000729293.1;transcript_id=CHM13_chrY_T0001338;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001338;transcript_name=CHM13_chrY_T0001338;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001338:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486358	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1,ENST00000729293.1;transcript_id=CHM13_chrY_T0001338;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001338;transcript_name=CHM13_chrY_T0001338;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001338:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18460110	18486198	1000	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1,ENST00000729295.1;transcript_id=CHM13_chrY_T0001339;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001339;gene_name=FAM224B;ID=CHM13_chrY_T0001339;Name=FAM224B
CHM13_chrY	CAT	exon	18460110	18460493	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1,ENST00000729295.1;transcript_id=CHM13_chrY_T0001339;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001339;transcript_name=CHM13_chrY_T0001339;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001339:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460494	18460580	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1,ENST00000729295.1;transcript_id=CHM13_chrY_T0001339;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001339;transcript_name=CHM13_chrY_T0001339;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001339:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460581	18460665	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1,ENST00000729295.1;transcript_id=CHM13_chrY_T0001339;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001339;transcript_name=CHM13_chrY_T0001339;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001339:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460666	18477939	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1,ENST00000729295.1;transcript_id=CHM13_chrY_T0001339;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001339;transcript_name=CHM13_chrY_T0001339;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001339:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18477940	18477996	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1,ENST00000729295.1;transcript_id=CHM13_chrY_T0001339;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001339;transcript_name=CHM13_chrY_T0001339;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001339:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18477997	18483245	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1,ENST00000729295.1;transcript_id=CHM13_chrY_T0001339;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001339;transcript_name=CHM13_chrY_T0001339;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001339:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1,ENST00000729295.1;transcript_id=CHM13_chrY_T0001339;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001339;transcript_name=CHM13_chrY_T0001339;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001339:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1,ENST00000729295.1;transcript_id=CHM13_chrY_T0001339;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001339;transcript_name=CHM13_chrY_T0001339;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001339:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486198	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1,ENST00000729295.1;transcript_id=CHM13_chrY_T0001339;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001339;transcript_name=CHM13_chrY_T0001339;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001339:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18460121	18486402	1000	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1,ENST00000729292.1;transcript_id=CHM13_chrY_T0001340;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001340;gene_name=FAM224B;ID=CHM13_chrY_T0001340;Name=FAM224B
CHM13_chrY	CAT	exon	18460121	18460493	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1,ENST00000729292.1;transcript_id=CHM13_chrY_T0001340;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001340;transcript_name=CHM13_chrY_T0001340;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001340:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460494	18460580	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1,ENST00000729292.1;transcript_id=CHM13_chrY_T0001340;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001340;transcript_name=CHM13_chrY_T0001340;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001340:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18460581	18460665	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1,ENST00000729292.1;transcript_id=CHM13_chrY_T0001340;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001340;transcript_name=CHM13_chrY_T0001340;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001340:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18460666	18486213	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1,ENST00000729292.1;transcript_id=CHM13_chrY_T0001340;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001340;transcript_name=CHM13_chrY_T0001340;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001340:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486402	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1,ENST00000729292.1;transcript_id=CHM13_chrY_T0001340;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001340;transcript_name=CHM13_chrY_T0001340;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001340:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18480886	18486413	1000	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1,ENST00000729296.1;transcript_id=CHM13_chrY_T0001344;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001344;gene_name=FAM224B;ID=CHM13_chrY_T0001344;Name=FAM224B
CHM13_chrY	CAT	exon	18480886	18481910	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1,ENST00000729296.1;transcript_id=CHM13_chrY_T0001344;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001344;transcript_name=CHM13_chrY_T0001344;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001344:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1,ENST00000729296.1;transcript_id=CHM13_chrY_T0001344;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001344;transcript_name=CHM13_chrY_T0001344;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001344:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1,ENST00000729296.1;transcript_id=CHM13_chrY_T0001344;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001344;transcript_name=CHM13_chrY_T0001344;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001344:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1,ENST00000729296.1;transcript_id=CHM13_chrY_T0001344;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001344;transcript_name=CHM13_chrY_T0001344;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001344:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486413	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1,ENST00000729296.1;transcript_id=CHM13_chrY_T0001344;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001344;transcript_name=CHM13_chrY_T0001344;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001344:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481670	18486508	1000	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1,ENST00000729297.1;transcript_id=CHM13_chrY_T0001345;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001345;gene_name=FAM224B;ID=CHM13_chrY_T0001345;Name=FAM224B
CHM13_chrY	CAT	exon	18481670	18481910	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1,ENST00000729297.1;transcript_id=CHM13_chrY_T0001345;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001345;transcript_name=CHM13_chrY_T0001345;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001345:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1,ENST00000729297.1;transcript_id=CHM13_chrY_T0001345;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001345;transcript_name=CHM13_chrY_T0001345;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001345:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1,ENST00000729297.1;transcript_id=CHM13_chrY_T0001345;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001345;transcript_name=CHM13_chrY_T0001345;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001345:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1,ENST00000729297.1;transcript_id=CHM13_chrY_T0001345;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001345;transcript_name=CHM13_chrY_T0001345;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001345:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486023	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1,ENST00000729297.1;transcript_id=CHM13_chrY_T0001345;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001345;transcript_name=CHM13_chrY_T0001345;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001345:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18486024	18486213	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1,ENST00000729297.1;transcript_id=CHM13_chrY_T0001345;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001345;transcript_name=CHM13_chrY_T0001345;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001345:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486508	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1,ENST00000729297.1;transcript_id=CHM13_chrY_T0001345;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001345;transcript_name=CHM13_chrY_T0001345;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001345:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481686	18486420	1000	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1,ENST00000729298.1;transcript_id=CHM13_chrY_T0001346;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001346;gene_name=FAM224B;ID=CHM13_chrY_T0001346;Name=FAM224B
CHM13_chrY	CAT	exon	18481686	18481910	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1,ENST00000729298.1;transcript_id=CHM13_chrY_T0001346;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001346;transcript_name=CHM13_chrY_T0001346;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001346:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1,ENST00000729298.1;transcript_id=CHM13_chrY_T0001346;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001346;transcript_name=CHM13_chrY_T0001346;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001346:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1,ENST00000729298.1;transcript_id=CHM13_chrY_T0001346;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001346;transcript_name=CHM13_chrY_T0001346;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001346:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1,ENST00000729298.1;transcript_id=CHM13_chrY_T0001346;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001346;transcript_name=CHM13_chrY_T0001346;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001346:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486097	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1,ENST00000729298.1;transcript_id=CHM13_chrY_T0001346;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001346;transcript_name=CHM13_chrY_T0001346;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001346:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18486098	18486213	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1,ENST00000729298.1;transcript_id=CHM13_chrY_T0001346;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001346;transcript_name=CHM13_chrY_T0001346;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001346:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486420	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1,ENST00000729298.1;transcript_id=CHM13_chrY_T0001346;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001346;transcript_name=CHM13_chrY_T0001346;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001346:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481686	18486402	1000	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1,ENST00000729300.1;transcript_id=CHM13_chrY_T0001347;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001347;gene_name=FAM224B;ID=CHM13_chrY_T0001347;Name=FAM224B
CHM13_chrY	CAT	exon	18481686	18481910	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1,ENST00000729300.1;transcript_id=CHM13_chrY_T0001347;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001347;transcript_name=CHM13_chrY_T0001347;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001347:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1,ENST00000729300.1;transcript_id=CHM13_chrY_T0001347;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001347;transcript_name=CHM13_chrY_T0001347;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001347:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483335	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1,ENST00000729300.1;transcript_id=CHM13_chrY_T0001347;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001347;transcript_name=CHM13_chrY_T0001347;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001347:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483336	18485863	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1,ENST00000729300.1;transcript_id=CHM13_chrY_T0001347;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001347;transcript_name=CHM13_chrY_T0001347;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001347:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486023	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1,ENST00000729300.1;transcript_id=CHM13_chrY_T0001347;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001347;transcript_name=CHM13_chrY_T0001347;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001347:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18486024	18486213	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1,ENST00000729300.1;transcript_id=CHM13_chrY_T0001347;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001347;transcript_name=CHM13_chrY_T0001347;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001347:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486402	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1,ENST00000729300.1;transcript_id=CHM13_chrY_T0001347;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001347;transcript_name=CHM13_chrY_T0001347;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001347:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481700	18486417	1000	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1,ENST00000729299.1;transcript_id=CHM13_chrY_T0001348;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001348;gene_name=FAM224B;ID=CHM13_chrY_T0001348;Name=FAM224B
CHM13_chrY	CAT	exon	18481700	18481910	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1,ENST00000729299.1;transcript_id=CHM13_chrY_T0001348;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001348;transcript_name=CHM13_chrY_T0001348;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001348:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1,ENST00000729299.1;transcript_id=CHM13_chrY_T0001348;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001348;transcript_name=CHM13_chrY_T0001348;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001348:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1,ENST00000729299.1;transcript_id=CHM13_chrY_T0001348;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001348;transcript_name=CHM13_chrY_T0001348;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001348:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18486213	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1,ENST00000729299.1;transcript_id=CHM13_chrY_T0001348;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001348;transcript_name=CHM13_chrY_T0001348;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001348:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486417	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1,ENST00000729299.1;transcript_id=CHM13_chrY_T0001348;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001348;transcript_name=CHM13_chrY_T0001348;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001348:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481704	18486374	1000	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1,ENST00000729305.1;transcript_id=CHM13_chrY_T0001349;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001349;gene_name=FAM224B;ID=CHM13_chrY_T0001349;Name=FAM224B
CHM13_chrY	CAT	exon	18481704	18481910	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1,ENST00000729305.1;transcript_id=CHM13_chrY_T0001349;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001349;transcript_name=CHM13_chrY_T0001349;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001349:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1,ENST00000729305.1;transcript_id=CHM13_chrY_T0001349;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001349;transcript_name=CHM13_chrY_T0001349;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001349:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483335	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1,ENST00000729305.1;transcript_id=CHM13_chrY_T0001349;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001349;transcript_name=CHM13_chrY_T0001349;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001349:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483336	18485863	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1,ENST00000729305.1;transcript_id=CHM13_chrY_T0001349;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001349;transcript_name=CHM13_chrY_T0001349;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001349:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486374	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1,ENST00000729305.1;transcript_id=CHM13_chrY_T0001349;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001349;transcript_name=CHM13_chrY_T0001349;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001349:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481704	18486359	1000	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1,ENST00000729306.1;transcript_id=CHM13_chrY_T0001350;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001350;gene_name=FAM224B;ID=CHM13_chrY_T0001350;Name=FAM224B
CHM13_chrY	CAT	exon	18481704	18481910	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1,ENST00000729306.1;transcript_id=CHM13_chrY_T0001350;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001350;transcript_name=CHM13_chrY_T0001350;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001350:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1,ENST00000729306.1;transcript_id=CHM13_chrY_T0001350;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001350;transcript_name=CHM13_chrY_T0001350;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001350:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18484315	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1,ENST00000729306.1;transcript_id=CHM13_chrY_T0001350;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001350;transcript_name=CHM13_chrY_T0001350;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001350:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18484316	18485863	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1,ENST00000729306.1;transcript_id=CHM13_chrY_T0001350;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001350;transcript_name=CHM13_chrY_T0001350;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001350:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486359	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1,ENST00000729306.1;transcript_id=CHM13_chrY_T0001350;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001350;transcript_name=CHM13_chrY_T0001350;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001350:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481708	18486391	1000	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1,ENST00000729302.1;transcript_id=CHM13_chrY_T0001351;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001351;gene_name=FAM224B;ID=CHM13_chrY_T0001351;Name=FAM224B
CHM13_chrY	CAT	exon	18481708	18481910	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1,ENST00000729302.1;transcript_id=CHM13_chrY_T0001351;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001351;transcript_name=CHM13_chrY_T0001351;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001351:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1,ENST00000729302.1;transcript_id=CHM13_chrY_T0001351;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001351;transcript_name=CHM13_chrY_T0001351;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001351:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1,ENST00000729302.1;transcript_id=CHM13_chrY_T0001351;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001351;transcript_name=CHM13_chrY_T0001351;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001351:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18484217	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1,ENST00000729302.1;transcript_id=CHM13_chrY_T0001351;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001351;transcript_name=CHM13_chrY_T0001351;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001351:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18484218	18484315	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1,ENST00000729302.1;transcript_id=CHM13_chrY_T0001351;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001351;transcript_name=CHM13_chrY_T0001351;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001351:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18484316	18486213	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1,ENST00000729302.1;transcript_id=CHM13_chrY_T0001351;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001351;transcript_name=CHM13_chrY_T0001351;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001351:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486391	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1,ENST00000729302.1;transcript_id=CHM13_chrY_T0001351;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001351;transcript_name=CHM13_chrY_T0001351;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001351:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481719	18486400	1000	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1,ENST00000729303.1;transcript_id=CHM13_chrY_T0001352;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001352;gene_name=FAM224B;ID=CHM13_chrY_T0001352;Name=FAM224B
CHM13_chrY	CAT	exon	18481719	18481910	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1,ENST00000729303.1;transcript_id=CHM13_chrY_T0001352;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001352;transcript_name=CHM13_chrY_T0001352;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001352:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1,ENST00000729303.1;transcript_id=CHM13_chrY_T0001352;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001352;transcript_name=CHM13_chrY_T0001352;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001352:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1,ENST00000729303.1;transcript_id=CHM13_chrY_T0001352;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001352;transcript_name=CHM13_chrY_T0001352;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001352:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1,ENST00000729303.1;transcript_id=CHM13_chrY_T0001352;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001352;transcript_name=CHM13_chrY_T0001352;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001352:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18485999	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1,ENST00000729303.1;transcript_id=CHM13_chrY_T0001352;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001352;transcript_name=CHM13_chrY_T0001352;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001352:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18486000	18486213	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1,ENST00000729303.1;transcript_id=CHM13_chrY_T0001352;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001352;transcript_name=CHM13_chrY_T0001352;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001352:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486400	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1,ENST00000729303.1;transcript_id=CHM13_chrY_T0001352;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001352;transcript_name=CHM13_chrY_T0001352;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001352:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481723	18486411	1000	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1,ENST00000729301.1;transcript_id=CHM13_chrY_T0001353;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001353;gene_name=FAM224B;ID=CHM13_chrY_T0001353;Name=FAM224B
CHM13_chrY	CAT	exon	18481723	18481910	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1,ENST00000729301.1;transcript_id=CHM13_chrY_T0001353;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001353;transcript_name=CHM13_chrY_T0001353;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001353:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1,ENST00000729301.1;transcript_id=CHM13_chrY_T0001353;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001353;transcript_name=CHM13_chrY_T0001353;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001353:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1,ENST00000729301.1;transcript_id=CHM13_chrY_T0001353;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001353;transcript_name=CHM13_chrY_T0001353;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001353:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18484217	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1,ENST00000729301.1;transcript_id=CHM13_chrY_T0001353;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001353;transcript_name=CHM13_chrY_T0001353;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001353:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18484218	18484315	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1,ENST00000729301.1;transcript_id=CHM13_chrY_T0001353;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001353;transcript_name=CHM13_chrY_T0001353;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001353:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18484316	18485863	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1,ENST00000729301.1;transcript_id=CHM13_chrY_T0001353;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001353;transcript_name=CHM13_chrY_T0001353;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001353:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486023	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1,ENST00000729301.1;transcript_id=CHM13_chrY_T0001353;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001353;transcript_name=CHM13_chrY_T0001353;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001353:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18486024	18486213	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1,ENST00000729301.1;transcript_id=CHM13_chrY_T0001353;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001353;transcript_name=CHM13_chrY_T0001353;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001353:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486411	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1,ENST00000729301.1;transcript_id=CHM13_chrY_T0001353;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001353;transcript_name=CHM13_chrY_T0001353;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001353:4;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481723	18486352	1000	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1,ENST00000729308.1;transcript_id=CHM13_chrY_T0001354;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001354;gene_name=FAM224B;ID=CHM13_chrY_T0001354;Name=FAM224B
CHM13_chrY	CAT	exon	18481723	18481910	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1,ENST00000729308.1;transcript_id=CHM13_chrY_T0001354;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001354;transcript_name=CHM13_chrY_T0001354;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001354:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1,ENST00000729308.1;transcript_id=CHM13_chrY_T0001354;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001354;transcript_name=CHM13_chrY_T0001354;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001354:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1,ENST00000729308.1;transcript_id=CHM13_chrY_T0001354;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001354;transcript_name=CHM13_chrY_T0001354;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001354:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18485863	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1,ENST00000729308.1;transcript_id=CHM13_chrY_T0001354;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001354;transcript_name=CHM13_chrY_T0001354;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001354:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18485985	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1,ENST00000729308.1;transcript_id=CHM13_chrY_T0001354;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001354;transcript_name=CHM13_chrY_T0001354;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001354:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18485986	18486213	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1,ENST00000729308.1;transcript_id=CHM13_chrY_T0001354;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001354;transcript_name=CHM13_chrY_T0001354;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001354:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486352	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1,ENST00000729308.1;transcript_id=CHM13_chrY_T0001354;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001354;transcript_name=CHM13_chrY_T0001354;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001354:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481725	18486316	1000	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1,ENST00000729311.1;transcript_id=CHM13_chrY_T0001355;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001355;gene_name=FAM224B;ID=CHM13_chrY_T0001355;Name=FAM224B
CHM13_chrY	CAT	exon	18481725	18481910	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1,ENST00000729311.1;transcript_id=CHM13_chrY_T0001355;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001355;transcript_name=CHM13_chrY_T0001355;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001355:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18485863	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1,ENST00000729311.1;transcript_id=CHM13_chrY_T0001355;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001355;transcript_name=CHM13_chrY_T0001355;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001355:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486316	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1,ENST00000729311.1;transcript_id=CHM13_chrY_T0001355;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001355;transcript_name=CHM13_chrY_T0001355;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001355:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481727	18486406	1000	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1,ENST00000729304.1;transcript_id=CHM13_chrY_T0001356;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001356;gene_name=FAM224B;ID=CHM13_chrY_T0001356;Name=FAM224B
CHM13_chrY	CAT	exon	18481727	18481910	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1,ENST00000729304.1;transcript_id=CHM13_chrY_T0001356;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001356;transcript_name=CHM13_chrY_T0001356;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001356:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1,ENST00000729304.1;transcript_id=CHM13_chrY_T0001356;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001356;transcript_name=CHM13_chrY_T0001356;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001356:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483363	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1,ENST00000729304.1;transcript_id=CHM13_chrY_T0001356;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001356;transcript_name=CHM13_chrY_T0001356;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001356:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483364	18484217	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1,ENST00000729304.1;transcript_id=CHM13_chrY_T0001356;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001356;transcript_name=CHM13_chrY_T0001356;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001356:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18484218	18484315	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1,ENST00000729304.1;transcript_id=CHM13_chrY_T0001356;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001356;transcript_name=CHM13_chrY_T0001356;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001356:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18484316	18485863	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1,ENST00000729304.1;transcript_id=CHM13_chrY_T0001356;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001356;transcript_name=CHM13_chrY_T0001356;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001356:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486406	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1,ENST00000729304.1;transcript_id=CHM13_chrY_T0001356;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001356;transcript_name=CHM13_chrY_T0001356;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001356:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481727	18486359	1000	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1,ENST00000729307.1;transcript_id=CHM13_chrY_T0001357;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001357;gene_name=FAM224B;ID=CHM13_chrY_T0001357;Name=FAM224B
CHM13_chrY	CAT	exon	18481727	18481910	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1,ENST00000729307.1;transcript_id=CHM13_chrY_T0001357;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001357;transcript_name=CHM13_chrY_T0001357;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001357:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1,ENST00000729307.1;transcript_id=CHM13_chrY_T0001357;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001357;transcript_name=CHM13_chrY_T0001357;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001357:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18484315	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1,ENST00000729307.1;transcript_id=CHM13_chrY_T0001357;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001357;transcript_name=CHM13_chrY_T0001357;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001357:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18484316	18485863	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1,ENST00000729307.1;transcript_id=CHM13_chrY_T0001357;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001357;transcript_name=CHM13_chrY_T0001357;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001357:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486023	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1,ENST00000729307.1;transcript_id=CHM13_chrY_T0001357;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001357;transcript_name=CHM13_chrY_T0001357;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001357:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18486024	18486213	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1,ENST00000729307.1;transcript_id=CHM13_chrY_T0001357;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001357;transcript_name=CHM13_chrY_T0001357;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001357:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486359	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1,ENST00000729307.1;transcript_id=CHM13_chrY_T0001357;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001357;transcript_name=CHM13_chrY_T0001357;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001357:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481727	18486354	1000	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1,ENST00000729309.1;transcript_id=CHM13_chrY_T0001358;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001358;gene_name=FAM224B;ID=CHM13_chrY_T0001358;Name=FAM224B
CHM13_chrY	CAT	exon	18481727	18481910	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1,ENST00000729309.1;transcript_id=CHM13_chrY_T0001358;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001358;transcript_name=CHM13_chrY_T0001358;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001358:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18485863	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1,ENST00000729309.1;transcript_id=CHM13_chrY_T0001358;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001358;transcript_name=CHM13_chrY_T0001358;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001358:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486023	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1,ENST00000729309.1;transcript_id=CHM13_chrY_T0001358;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001358;transcript_name=CHM13_chrY_T0001358;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001358:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18486024	18486213	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1,ENST00000729309.1;transcript_id=CHM13_chrY_T0001358;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001358;transcript_name=CHM13_chrY_T0001358;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001358:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486354	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1,ENST00000729309.1;transcript_id=CHM13_chrY_T0001358;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001358;transcript_name=CHM13_chrY_T0001358;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001358:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18481727	18486353	1000	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1,ENST00000729310.1;transcript_id=CHM13_chrY_T0001359;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001359;gene_name=FAM224B;ID=CHM13_chrY_T0001359;Name=FAM224B
CHM13_chrY	CAT	exon	18481727	18481910	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1,ENST00000729310.1;transcript_id=CHM13_chrY_T0001359;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001359;transcript_name=CHM13_chrY_T0001359;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001359:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18481911	18483245	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1,ENST00000729310.1;transcript_id=CHM13_chrY_T0001359;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001359;transcript_name=CHM13_chrY_T0001359;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001359:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18483246	18483335	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1,ENST00000729310.1;transcript_id=CHM13_chrY_T0001359;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001359;transcript_name=CHM13_chrY_T0001359;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001359:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483336	18485863	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1,ENST00000729310.1;transcript_id=CHM13_chrY_T0001359;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001359;transcript_name=CHM13_chrY_T0001359;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001359:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486097	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1,ENST00000729310.1;transcript_id=CHM13_chrY_T0001359;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001359;transcript_name=CHM13_chrY_T0001359;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001359:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18486098	18486213	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1,ENST00000729310.1;transcript_id=CHM13_chrY_T0001359;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001359;transcript_name=CHM13_chrY_T0001359;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001359:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486353	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1,ENST00000729310.1;transcript_id=CHM13_chrY_T0001359;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001359;transcript_name=CHM13_chrY_T0001359;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001359:3;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18482948	18486354	1000	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1,ENST00000729312.1;transcript_id=CHM13_chrY_T0001360;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001360;gene_name=FAM224B;ID=CHM13_chrY_T0001360;Name=FAM224B
CHM13_chrY	CAT	exon	18482948	18483206	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1,ENST00000729312.1;transcript_id=CHM13_chrY_T0001360;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001360;transcript_name=CHM13_chrY_T0001360;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001360:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18483207	18485863	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1,ENST00000729312.1;transcript_id=CHM13_chrY_T0001360;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001360;transcript_name=CHM13_chrY_T0001360;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001360:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485864	18486354	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1,ENST00000729312.1;transcript_id=CHM13_chrY_T0001360;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001360;transcript_name=CHM13_chrY_T0001360;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001360:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18484279	18486404	1000	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1,ENST00000729313.1;transcript_id=CHM13_chrY_T0001361;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_G0000447;transcript_name=CHM13_chrY_T0001361;gene_name=FAM224B;ID=CHM13_chrY_T0001361;Name=FAM224B
CHM13_chrY	CAT	exon	18484279	18484315	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1,ENST00000729313.1;transcript_id=CHM13_chrY_T0001361;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001361;transcript_name=CHM13_chrY_T0001361;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001361:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18484316	18485435	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1,ENST00000729313.1;transcript_id=CHM13_chrY_T0001361;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001361;transcript_name=CHM13_chrY_T0001361;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001361:0;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18485436	18485632	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1,ENST00000729313.1;transcript_id=CHM13_chrY_T0001361;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001361;transcript_name=CHM13_chrY_T0001361;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001361:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18485633	18486213	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1,ENST00000729313.1;transcript_id=CHM13_chrY_T0001361;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001361;transcript_name=CHM13_chrY_T0001361;gene_name=FAM224B;ID=intron:CHM13_chrY_T0001361:1;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18486214	18486404	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1,ENST00000729313.1;transcript_id=CHM13_chrY_T0001361;gene_id=CHM13_chrY_G0000447;Parent=CHM13_chrY_T0001361;transcript_name=CHM13_chrY_T0001361;gene_name=FAM224B;ID=exon:CHM13_chrY_T0001361:2;Name=FAM224B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18464402	18464514	.	+	.	source_gene_common_name=RNA5SP523;source_gene=ENSG00000252667.1;alternative_source_transcripts=ENST00000516506.1,ENST00000516506.1;gene_id=CHM13_chrY_G0000448;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP523;gene_sources=liftoff;ID=CHM13_chrY_G0000448;Name=RNA5SP523
CHM13_chrY	CAT	transcript	18464402	18464514	1000	+	.	source_transcript=ENST00000516858.1;source_transcript_name=RNA5SP523-201;source_gene=ENSG00000252667.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252667.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516858.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP523;alternative_source_transcripts=ENST00000516506.1,ENST00000516506.1;transcript_id=CHM13_chrY_T0001341;gene_id=CHM13_chrY_G0000448;Parent=CHM13_chrY_G0000448;transcript_name=CHM13_chrY_T0001341;gene_name=RNA5SP523;ID=CHM13_chrY_T0001341;Name=RNA5SP523
CHM13_chrY	CAT	exon	18464402	18464514	.	+	.	source_transcript=ENST00000516858.1;source_transcript_name=RNA5SP523-201;source_gene=ENSG00000252667.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252667.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516858.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP523;alternative_source_transcripts=ENST00000516506.1,ENST00000516506.1;transcript_id=CHM13_chrY_T0001341;gene_id=CHM13_chrY_G0000448;Parent=CHM13_chrY_T0001341;transcript_name=CHM13_chrY_T0001341;gene_name=RNA5SP523;ID=exon:CHM13_chrY_T0001341:0;Name=RNA5SP523;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18466312	18466427	.	+	.	source_gene_common_name=RNA5SP522;source_gene=ENSG00000251953.1;alternative_source_transcripts=ENST00000516203.1,ENST00000516203.1;gene_id=CHM13_chrY_G0000449;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP522;gene_sources=liftoff;ID=CHM13_chrY_G0000449;Name=RNA5SP522
CHM13_chrY	CAT	transcript	18466312	18466427	1000	+	.	source_transcript=ENST00000516144.1;source_transcript_name=RNA5SP522-201;source_gene=ENSG00000251953.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251953.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516144.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP522;alternative_source_transcripts=ENST00000516203.1,ENST00000516203.1;transcript_id=CHM13_chrY_T0001342;gene_id=CHM13_chrY_G0000449;Parent=CHM13_chrY_G0000449;transcript_name=CHM13_chrY_T0001342;gene_name=RNA5SP522;ID=CHM13_chrY_T0001342;Name=RNA5SP522
CHM13_chrY	CAT	exon	18466312	18466427	.	+	.	source_transcript=ENST00000516144.1;source_transcript_name=RNA5SP522-201;source_gene=ENSG00000251953.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251953.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516144.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP522;alternative_source_transcripts=ENST00000516203.1,ENST00000516203.1;transcript_id=CHM13_chrY_T0001342;gene_id=CHM13_chrY_G0000449;Parent=CHM13_chrY_T0001342;transcript_name=CHM13_chrY_T0001342;gene_name=RNA5SP522;ID=exon:CHM13_chrY_T0001342:0;Name=RNA5SP522;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18475501	18475590	.	-	.	source_gene_common_name=ENSG00000273966;source_gene=ENSG00000273966.1;alternative_source_transcripts=ENST00000615048.1,ENST00000615048.1;gene_id=CHM13_chrY_G0000450;gene_biotype=misc_RNA;gene_name=ENSG00000273966;gene_sources=liftoff;ID=CHM13_chrY_G0000450;Name=ENSG00000273966
CHM13_chrY	CAT	transcript	18475501	18475590	1000	-	.	source_transcript=ENST00000615048.1;source_transcript_name=ENST00000615048;source_gene=ENSG00000273966.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000273966.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000615048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615048.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273966;alternative_source_transcripts=ENST00000615048.1,ENST00000615048.1;transcript_id=CHM13_chrY_T0001343;gene_id=CHM13_chrY_G0000450;Parent=CHM13_chrY_G0000450;transcript_name=CHM13_chrY_T0001343;gene_name=ENSG00000273966;ID=CHM13_chrY_T0001343;Name=ENSG00000273966
CHM13_chrY	CAT	exon	18475501	18475590	.	-	.	source_transcript=ENST00000615048.1;source_transcript_name=ENST00000615048;source_gene=ENSG00000273966.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000273966.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000615048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615048.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273966;alternative_source_transcripts=ENST00000615048.1,ENST00000615048.1;transcript_id=CHM13_chrY_T0001343;gene_id=CHM13_chrY_G0000450;Parent=CHM13_chrY_T0001343;transcript_name=CHM13_chrY_T0001343;gene_name=ENSG00000273966;ID=exon:CHM13_chrY_T0001343:0;Name=ENSG00000273966;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18527817	18532390	.	-	.	source_gene_common_name=CLUHP1;source_gene=ENSG00000238191.3;alternative_source_transcripts=ENST00000435012.1;gene_id=CHM13_chrY_G0000451;gene_biotype=unprocessed_pseudogene;gene_name=CLUHP1;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000451;Name=CLUHP1
CHM13_chrY	CAT	transcript	18527817	18532390	1000	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_G0000451;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=CHM13_chrY_T0001362;Name=CLUHP1
CHM13_chrY	CAT	exon	18527817	18528097	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001362:0;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18528098	18528574	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001362:0;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18528575	18528673	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001362:1;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18528674	18529362	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001362:1;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18529363	18529454	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001362:2;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18529455	18529704	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001362:2;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18529705	18529777	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001362:3;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18529778	18530421	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001362:3;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18530422	18530546	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001362:4;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18530547	18530649	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001362:4;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18530650	18530996	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001362:5;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18530997	18531178	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001362:5;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18531179	18531319	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001362:6;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18531320	18532204	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001362:6;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18532205	18532390	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=transMap;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;alternative_source_transcripts=ENST00000435012.1;transcript_id=CHM13_chrY_T0001362;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001362;transcript_name=CHM13_chrY_T0001362;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001362:7;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18527817	18532390	1000	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_G0000451;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=CHM13_chrY_T0001363;Name=CLUHP1
CHM13_chrY	CAT	exon	18527817	18527940	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001363:0;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18527941	18528017	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001363:0;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18528018	18528097	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001363:1;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18528098	18528574	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001363:1;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18528575	18528673	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001363:2;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18528674	18529362	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001363:2;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18529363	18529454	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001363:3;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18529455	18529704	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001363:3;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18529705	18529777	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001363:4;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18529778	18530421	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001363:4;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18530422	18530546	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001363:5;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18530547	18530649	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001363:5;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18530650	18530803	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001363:6;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18530804	18530880	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001363:6;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18530881	18530996	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001363:7;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18530997	18531178	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001363:7;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18531179	18531319	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001363:8;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18531320	18532204	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=intron:CHM13_chrY_T0001363:8;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18532205	18532390	.	-	.	source_transcript=ENST00000435012.1;source_transcript_name=CLUHP1-201;source_gene=ENSG00000238191.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238191.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435012.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP1;transcript_id=CHM13_chrY_T0001363;gene_id=CHM13_chrY_G0000451;Parent=CHM13_chrY_T0001363;transcript_name=CHM13_chrY_T0001363;gene_name=CLUHP1;ID=exon:CHM13_chrY_T0001363:9;Name=CLUHP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18535071	18535960	.	+	.	source_gene_common_name=TAF9P1;source_gene=ENSG00000226353.1;alternative_source_transcripts=ENST00000445421.1,ENST00000445421.1;gene_id=CHM13_chrY_G0000452;gene_biotype=processed_pseudogene;gene_name=TAF9P1;gene_sources=liftoff;ID=CHM13_chrY_G0000452;Name=TAF9P1
CHM13_chrY	CAT	transcript	18535071	18535960	1000	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1,ENST00000445421.1;transcript_id=CHM13_chrY_T0001364;gene_id=CHM13_chrY_G0000452;Parent=CHM13_chrY_G0000452;transcript_name=CHM13_chrY_T0001364;gene_name=TAF9P1;ID=CHM13_chrY_T0001364;Name=TAF9P1
CHM13_chrY	CAT	exon	18535071	18535543	.	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1,ENST00000445421.1;transcript_id=CHM13_chrY_T0001364;gene_id=CHM13_chrY_G0000452;Parent=CHM13_chrY_T0001364;transcript_name=CHM13_chrY_T0001364;gene_name=TAF9P1;ID=exon:CHM13_chrY_T0001364:0;Name=TAF9P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18535544	18535918	.	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1,ENST00000445421.1;transcript_id=CHM13_chrY_T0001364;gene_id=CHM13_chrY_G0000452;Parent=CHM13_chrY_T0001364;transcript_name=CHM13_chrY_T0001364;gene_name=TAF9P1;ID=intron:CHM13_chrY_T0001364:0;Name=TAF9P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18535919	18535960	.	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1,ENST00000445421.1;transcript_id=CHM13_chrY_T0001364;gene_id=CHM13_chrY_G0000452;Parent=CHM13_chrY_T0001364;transcript_name=CHM13_chrY_T0001364;gene_name=TAF9P1;ID=exon:CHM13_chrY_T0001364:1;Name=TAF9P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18609609	18636220	.	-	.	source_gene_common_name=ENSG00000298004;source_gene=ENSG00000298004.1;gene_id=CHM13_chrY_G0000453;gene_biotype=lncRNA;gene_name=ENSG00000298004;gene_sources=liftoff;ID=CHM13_chrY_G0000453;Name=ENSG00000298004
CHM13_chrY	CAT	transcript	18609609	18636183	1000	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001365;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_G0000453;transcript_name=CHM13_chrY_T0001365;gene_name=ENSG00000298004;ID=CHM13_chrY_T0001365;Name=ENSG00000298004
CHM13_chrY	CAT	exon	18609609	18609899	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001365;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001365;transcript_name=CHM13_chrY_T0001365;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001365:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18609900	18611492	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001365;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001365;transcript_name=CHM13_chrY_T0001365;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001365:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18611493	18611617	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001365;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001365;transcript_name=CHM13_chrY_T0001365;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001365:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18611618	18612509	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001365;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001365;transcript_name=CHM13_chrY_T0001365;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001365:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18612510	18612728	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001365;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001365;transcript_name=CHM13_chrY_T0001365;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001365:2;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18612729	18635866	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001365;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001365;transcript_name=CHM13_chrY_T0001365;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001365:2;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18635867	18636183	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001365;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001365;transcript_name=CHM13_chrY_T0001365;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001365:3;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18620565	18636270	1000	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001367;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_G0000453;transcript_name=CHM13_chrY_T0001367;gene_name=ENSG00000298004;ID=CHM13_chrY_T0001367;Name=ENSG00000298004
CHM13_chrY	CAT	exon	18620565	18621608	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001367;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001367;transcript_name=CHM13_chrY_T0001367;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001367:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18621609	18625298	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001367;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001367;transcript_name=CHM13_chrY_T0001367;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001367:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18625299	18625423	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001367;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001367;transcript_name=CHM13_chrY_T0001367;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001367:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18625424	18635866	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001367;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001367;transcript_name=CHM13_chrY_T0001367;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001367:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18635867	18636270	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001367;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001367;transcript_name=CHM13_chrY_T0001367;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001367:2;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18620568	18636220	1000	-	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001368;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_G0000453;transcript_name=CHM13_chrY_T0001368;gene_name=ENSG00000298004;ID=CHM13_chrY_T0001368;Name=ENSG00000298004
CHM13_chrY	CAT	exon	18620568	18621608	.	-	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001368;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001368;transcript_name=CHM13_chrY_T0001368;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001368:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18621609	18635866	.	-	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001368;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001368;transcript_name=CHM13_chrY_T0001368;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001368:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18635867	18636220	.	-	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001368;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001368;transcript_name=CHM13_chrY_T0001368;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001368:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18620573	18636214	1000	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001369;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_G0000453;transcript_name=CHM13_chrY_T0001369;gene_name=ENSG00000298004;ID=CHM13_chrY_T0001369;Name=ENSG00000298004
CHM13_chrY	CAT	exon	18620573	18621608	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001369;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001369;transcript_name=CHM13_chrY_T0001369;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001369:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18621609	18625298	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001369;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001369;transcript_name=CHM13_chrY_T0001369;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001369:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18625299	18625419	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001369;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001369;transcript_name=CHM13_chrY_T0001369;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001369:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18625420	18635866	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001369;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001369;transcript_name=CHM13_chrY_T0001369;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001369:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18635867	18636214	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001369;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001369;transcript_name=CHM13_chrY_T0001369;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001369:2;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18620573	18636220	1000	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001370;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_G0000453;transcript_name=CHM13_chrY_T0001370;gene_name=ENSG00000298004;ID=CHM13_chrY_T0001370;Name=ENSG00000298004
CHM13_chrY	CAT	exon	18620573	18621608	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001370;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001370;transcript_name=CHM13_chrY_T0001370;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001370:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18621609	18625298	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001370;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001370;transcript_name=CHM13_chrY_T0001370;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001370:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18625299	18625423	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001370;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001370;transcript_name=CHM13_chrY_T0001370;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001370:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18625424	18635935	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001370;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001370;transcript_name=CHM13_chrY_T0001370;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001370:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18635936	18636220	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001370;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001370;transcript_name=CHM13_chrY_T0001370;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001370:2;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18621101	18636183	1000	-	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001371;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_G0000453;transcript_name=CHM13_chrY_T0001371;gene_name=ENSG00000298004;ID=CHM13_chrY_T0001371;Name=ENSG00000298004
CHM13_chrY	CAT	exon	18621101	18621608	.	-	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001371;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001371;transcript_name=CHM13_chrY_T0001371;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001371:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18621609	18635935	.	-	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001371;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001371;transcript_name=CHM13_chrY_T0001371;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001371:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18635936	18636183	.	-	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001371;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001371;transcript_name=CHM13_chrY_T0001371;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001371:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18621104	18636210	1000	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001372;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_G0000453;transcript_name=CHM13_chrY_T0001372;gene_name=ENSG00000298004;ID=CHM13_chrY_T0001372;Name=ENSG00000298004
CHM13_chrY	CAT	exon	18621104	18621608	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001372;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001372;transcript_name=CHM13_chrY_T0001372;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001372:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18621609	18622227	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001372;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001372;transcript_name=CHM13_chrY_T0001372;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001372:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18622228	18622279	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001372;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001372;transcript_name=CHM13_chrY_T0001372;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001372:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18622280	18625298	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001372;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001372;transcript_name=CHM13_chrY_T0001372;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001372:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18625299	18625423	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001372;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001372;transcript_name=CHM13_chrY_T0001372;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001372:2;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18625424	18635866	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001372;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001372;transcript_name=CHM13_chrY_T0001372;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001372:2;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18635867	18636210	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001372;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001372;transcript_name=CHM13_chrY_T0001372;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001372:3;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18623976	18636194	1000	-	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001373;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_G0000453;transcript_name=CHM13_chrY_T0001373;gene_name=ENSG00000298004;ID=CHM13_chrY_T0001373;Name=ENSG00000298004
CHM13_chrY	CAT	exon	18623976	18625423	.	-	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001373;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001373;transcript_name=CHM13_chrY_T0001373;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001373:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18625424	18635935	.	-	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001373;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001373;transcript_name=CHM13_chrY_T0001373;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001373:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18635936	18636194	.	-	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001373;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001373;transcript_name=CHM13_chrY_T0001373;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001373:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18624127	18636308	1000	-	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001374;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_G0000453;transcript_name=CHM13_chrY_T0001374;gene_name=ENSG00000298004;ID=CHM13_chrY_T0001374;Name=ENSG00000298004
CHM13_chrY	CAT	exon	18624127	18625423	.	-	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001374;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001374;transcript_name=CHM13_chrY_T0001374;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001374:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18625424	18635866	.	-	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001374;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001374;transcript_name=CHM13_chrY_T0001374;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001374:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18635867	18636308	.	-	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001374;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001374;transcript_name=CHM13_chrY_T0001374;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001374:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18625260	18636210	1000	-	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001375;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_G0000453;transcript_name=CHM13_chrY_T0001375;gene_name=ENSG00000298004;ID=CHM13_chrY_T0001375;Name=ENSG00000298004
CHM13_chrY	CAT	exon	18625260	18625419	.	-	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001375;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001375;transcript_name=CHM13_chrY_T0001375;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001375:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18625420	18635866	.	-	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001375;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001375;transcript_name=CHM13_chrY_T0001375;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001375:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18635867	18636210	.	-	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001375;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001375;transcript_name=CHM13_chrY_T0001375;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001375:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18630285	18636173	1000	-	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001377;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_G0000453;transcript_name=CHM13_chrY_T0001377;gene_name=ENSG00000298004;ID=CHM13_chrY_T0001377;Name=ENSG00000298004
CHM13_chrY	CAT	exon	18630285	18630918	.	-	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001377;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001377;transcript_name=CHM13_chrY_T0001377;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001377:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18630919	18635866	.	-	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001377;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001377;transcript_name=CHM13_chrY_T0001377;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001377:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18635867	18636173	.	-	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001377;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001377;transcript_name=CHM13_chrY_T0001377;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001377:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18633715	18636220	1000	-	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001379;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_G0000453;transcript_name=CHM13_chrY_T0001379;gene_name=ENSG00000298004;ID=CHM13_chrY_T0001379;Name=ENSG00000298004
CHM13_chrY	CAT	exon	18633715	18634278	.	-	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001379;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001379;transcript_name=CHM13_chrY_T0001379;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001379:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18634279	18635866	.	-	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001379;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001379;transcript_name=CHM13_chrY_T0001379;gene_name=ENSG00000298004;ID=intron:CHM13_chrY_T0001379:0;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18635867	18636220	.	-	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=CHM13_chrY_T0001379;gene_id=CHM13_chrY_G0000453;Parent=CHM13_chrY_T0001379;transcript_name=CHM13_chrY_T0001379;gene_name=ENSG00000298004;ID=exon:CHM13_chrY_T0001379:1;Name=ENSG00000298004;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18612516	18614733	.	-	.	source_gene_common_name=ENSG00000275578;source_gene=ENSG00000275578.1;gene_id=CHM13_chrY_G0000454;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000275578;gene_sources=liftoff;ID=CHM13_chrY_G0000454;Name=ENSG00000275578
CHM13_chrY	CAT	transcript	18612516	18614733	1000	-	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;transcript_id=CHM13_chrY_T0001366;gene_id=CHM13_chrY_G0000454;Parent=CHM13_chrY_G0000454;transcript_name=CHM13_chrY_T0001366;gene_name=ENSG00000275578;ID=CHM13_chrY_T0001366;Name=ENSG00000275578
CHM13_chrY	CAT	exon	18612516	18612726	.	-	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;transcript_id=CHM13_chrY_T0001366;gene_id=CHM13_chrY_G0000454;Parent=CHM13_chrY_T0001366;transcript_name=CHM13_chrY_T0001366;gene_name=ENSG00000275578;ID=exon:CHM13_chrY_T0001366:0;Name=ENSG00000275578;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18612727	18614546	.	-	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;transcript_id=CHM13_chrY_T0001366;gene_id=CHM13_chrY_G0000454;Parent=CHM13_chrY_T0001366;transcript_name=CHM13_chrY_T0001366;gene_name=ENSG00000275578;ID=intron:CHM13_chrY_T0001366:0;Name=ENSG00000275578;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18614547	18614733	.	-	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;transcript_id=CHM13_chrY_T0001366;gene_id=CHM13_chrY_G0000454;Parent=CHM13_chrY_T0001366;transcript_name=CHM13_chrY_T0001366;gene_name=ENSG00000275578;ID=exon:CHM13_chrY_T0001366:1;Name=ENSG00000275578;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18628150	18629729	.	+	.	source_gene_common_name=CDY5P;source_gene=ENSG00000226449.1;alternative_source_transcripts=ENST00000411487.1,ENST00000411487.1;gene_id=CHM13_chrY_G0000455;gene_biotype=unprocessed_pseudogene;gene_name=CDY5P;gene_sources=liftoff;ID=CHM13_chrY_G0000455;Name=CDY5P
CHM13_chrY	CAT	transcript	18628150	18629729	1000	+	.	source_transcript=ENST00000411487.1;source_transcript_name=CDY5P-201;source_gene=ENSG00000226449.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226449.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411487.1;transcript_score=199.937;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY5P;alternative_source_transcripts=ENST00000411487.1,ENST00000411487.1;transcript_id=CHM13_chrY_T0001376;gene_id=CHM13_chrY_G0000455;Parent=CHM13_chrY_G0000455;transcript_name=CHM13_chrY_T0001376;gene_name=CDY5P;ID=CHM13_chrY_T0001376;Name=CDY5P
CHM13_chrY	CAT	exon	18628150	18629729	.	+	.	source_transcript=ENST00000411487.1;source_transcript_name=CDY5P-201;source_gene=ENSG00000226449.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226449.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411487.1;transcript_score=199.937;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY5P;alternative_source_transcripts=ENST00000411487.1,ENST00000411487.1;transcript_id=CHM13_chrY_T0001376;gene_id=CHM13_chrY_G0000455;Parent=CHM13_chrY_T0001376;transcript_name=CHM13_chrY_T0001376;gene_name=CDY5P;ID=exon:CHM13_chrY_T0001376:0;Name=CDY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18633304	18633632	.	+	.	source_gene_common_name=ELOCP36;source_gene=ENSG00000225896.1;alternative_source_transcripts=ENST00000425789.1,ENST00000425789.1;gene_id=CHM13_chrY_G0000456;gene_biotype=processed_pseudogene;gene_name=ELOCP36;gene_sources=liftoff;ID=CHM13_chrY_G0000456;Name=ELOCP36
CHM13_chrY	CAT	transcript	18633304	18633632	1000	+	.	source_transcript=ENST00000425789.1;source_transcript_name=ELOCP36-201;source_gene=ENSG00000225896.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225896.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425789.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP36;alternative_source_transcripts=ENST00000425789.1,ENST00000425789.1;transcript_id=CHM13_chrY_T0001378;gene_id=CHM13_chrY_G0000456;Parent=CHM13_chrY_G0000456;transcript_name=CHM13_chrY_T0001378;gene_name=ELOCP36;ID=CHM13_chrY_T0001378;Name=ELOCP36
CHM13_chrY	CAT	exon	18633304	18633632	.	+	.	source_transcript=ENST00000425789.1;source_transcript_name=ELOCP36-201;source_gene=ENSG00000225896.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225896.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425789.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP36;alternative_source_transcripts=ENST00000425789.1,ENST00000425789.1;transcript_id=CHM13_chrY_T0001378;gene_id=CHM13_chrY_G0000456;Parent=CHM13_chrY_T0001378;transcript_name=CHM13_chrY_T0001378;gene_name=ELOCP36;ID=exon:CHM13_chrY_T0001378:0;Name=ELOCP36;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18663558	18664682	.	-	.	source_gene_common_name=ACTG1P2;source_gene=ENSG00000229129.1;alternative_source_transcripts=ENST00000415776.1,ENST00000415776.1;gene_id=CHM13_chrY_G0000457;gene_biotype=processed_pseudogene;gene_name=ACTG1P2;gene_sources=liftoff;ID=CHM13_chrY_G0000457;Name=ACTG1P2
CHM13_chrY	CAT	transcript	18663558	18664682	1000	-	.	source_transcript=ENST00000415776.1;source_transcript_name=ACTG1P2-201;source_gene=ENSG00000229129.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229129.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415776.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P2;alternative_source_transcripts=ENST00000415776.1,ENST00000415776.1;transcript_id=CHM13_chrY_T0001380;gene_id=CHM13_chrY_G0000457;Parent=CHM13_chrY_G0000457;transcript_name=CHM13_chrY_T0001380;gene_name=ACTG1P2;ID=CHM13_chrY_T0001380;Name=ACTG1P2
CHM13_chrY	CAT	exon	18663558	18664682	.	-	.	source_transcript=ENST00000415776.1;source_transcript_name=ACTG1P2-201;source_gene=ENSG00000229129.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229129.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415776.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P2;alternative_source_transcripts=ENST00000415776.1,ENST00000415776.1;transcript_id=CHM13_chrY_T0001380;gene_id=CHM13_chrY_G0000457;Parent=CHM13_chrY_T0001380;transcript_name=CHM13_chrY_T0001380;gene_name=ACTG1P2;ID=exon:CHM13_chrY_T0001380:0;Name=ACTG1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18675537	18677117	.	-	.	source_gene_common_name=XKRY;source_gene=ENSG00000290724.1;gene_id=CHM13_chrY_G0000458;gene_biotype=lncRNA;gene_name=XKRY;gene_sources=liftoff;ID=CHM13_chrY_G0000458;Name=XKRY
CHM13_chrY	CAT	transcript	18675537	18677117	1000	-	.	source_transcript=ENST00000624960.1;source_transcript_name=XKRY-202;source_gene=ENSG00000290724.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290724.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000624960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000624960.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=CHM13_chrY_T0001381;gene_id=CHM13_chrY_G0000458;Parent=CHM13_chrY_G0000458;transcript_name=CHM13_chrY_T0001381;gene_name=XKRY;ID=CHM13_chrY_T0001381;Name=XKRY
CHM13_chrY	CAT	exon	18675537	18677117	.	-	.	source_transcript=ENST00000624960.1;source_transcript_name=XKRY-202;source_gene=ENSG00000290724.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290724.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000624960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000624960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=CHM13_chrY_T0001381;gene_id=CHM13_chrY_G0000458;Parent=CHM13_chrY_T0001381;transcript_name=CHM13_chrY_T0001381;gene_name=XKRY;ID=exon:CHM13_chrY_T0001381:0;Name=XKRY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18675673	18683957	.	-	.	source_gene_common_name=XKRY;source_gene=ENSG00000250868.5;gene_id=CHM13_chrY_G0000459;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XKRY;gene_sources=liftoff;ID=CHM13_chrY_G0000459;Name=XKRY
CHM13_chrY	CAT	transcript	18675673	18683957	1000	-	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=CHM13_chrY_T0001382;gene_id=CHM13_chrY_G0000459;Parent=CHM13_chrY_G0000459;transcript_name=CHM13_chrY_T0001382;gene_name=XKRY;ID=CHM13_chrY_T0001382;Name=XKRY
CHM13_chrY	CAT	exon	18675673	18676437	.	-	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=CHM13_chrY_T0001382;gene_id=CHM13_chrY_G0000459;Parent=CHM13_chrY_T0001382;transcript_name=CHM13_chrY_T0001382;gene_name=XKRY;ID=exon:CHM13_chrY_T0001382:0;Name=XKRY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18676438	18683622	.	-	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=CHM13_chrY_T0001382;gene_id=CHM13_chrY_G0000459;Parent=CHM13_chrY_T0001382;transcript_name=CHM13_chrY_T0001382;gene_name=XKRY;ID=intron:CHM13_chrY_T0001382:0;Name=XKRY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18683623	18683957	.	-	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=CHM13_chrY_T0001382;gene_id=CHM13_chrY_G0000459;Parent=CHM13_chrY_T0001382;transcript_name=CHM13_chrY_T0001382;gene_name=XKRY;ID=exon:CHM13_chrY_T0001382:1;Name=XKRY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18688767	18691372	.	+	.	source_gene_common_name=USP9YP23;source_gene=ENSG00000223555.1;alternative_source_transcripts=ENST00000455085.1,ENST00000455085.1;gene_id=CHM13_chrY_G0000460;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP23;gene_sources=liftoff;ID=CHM13_chrY_G0000460;Name=USP9YP23
CHM13_chrY	CAT	transcript	18688767	18691372	1000	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1,ENST00000455085.1;transcript_id=CHM13_chrY_T0001383;gene_id=CHM13_chrY_G0000460;Parent=CHM13_chrY_G0000460;transcript_name=CHM13_chrY_T0001383;gene_name=USP9YP23;ID=CHM13_chrY_T0001383;Name=USP9YP23
CHM13_chrY	CAT	exon	18688767	18688892	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1,ENST00000455085.1;transcript_id=CHM13_chrY_T0001383;gene_id=CHM13_chrY_G0000460;Parent=CHM13_chrY_T0001383;transcript_name=CHM13_chrY_T0001383;gene_name=USP9YP23;ID=exon:CHM13_chrY_T0001383:0;Name=USP9YP23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18688893	18689466	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1,ENST00000455085.1;transcript_id=CHM13_chrY_T0001383;gene_id=CHM13_chrY_G0000460;Parent=CHM13_chrY_T0001383;transcript_name=CHM13_chrY_T0001383;gene_name=USP9YP23;ID=intron:CHM13_chrY_T0001383:0;Name=USP9YP23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18689467	18689558	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1,ENST00000455085.1;transcript_id=CHM13_chrY_T0001383;gene_id=CHM13_chrY_G0000460;Parent=CHM13_chrY_T0001383;transcript_name=CHM13_chrY_T0001383;gene_name=USP9YP23;ID=exon:CHM13_chrY_T0001383:1;Name=USP9YP23;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18689559	18691183	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1,ENST00000455085.1;transcript_id=CHM13_chrY_T0001383;gene_id=CHM13_chrY_G0000460;Parent=CHM13_chrY_T0001383;transcript_name=CHM13_chrY_T0001383;gene_name=USP9YP23;ID=intron:CHM13_chrY_T0001383:1;Name=USP9YP23;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18691184	18691372	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1,ENST00000455085.1;transcript_id=CHM13_chrY_T0001383;gene_id=CHM13_chrY_G0000460;Parent=CHM13_chrY_T0001383;transcript_name=CHM13_chrY_T0001383;gene_name=USP9YP23;ID=exon:CHM13_chrY_T0001383:2;Name=USP9YP23;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18694864	18696033	.	-	.	source_gene_common_name=USP9YP27;source_gene=ENSG00000235521.1;gene_id=CHM13_chrY_G0000461;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP27;gene_sources=liftoff;ID=CHM13_chrY_G0000461;Name=USP9YP27
CHM13_chrY	CAT	transcript	18694864	18696033	1000	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=CHM13_chrY_T0001384;gene_id=CHM13_chrY_G0000461;Parent=CHM13_chrY_G0000461;transcript_name=CHM13_chrY_T0001384;gene_name=USP9YP27;ID=CHM13_chrY_T0001384;Name=USP9YP27
CHM13_chrY	CAT	exon	18694864	18694959	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=CHM13_chrY_T0001384;gene_id=CHM13_chrY_G0000461;Parent=CHM13_chrY_T0001384;transcript_name=CHM13_chrY_T0001384;gene_name=USP9YP27;ID=exon:CHM13_chrY_T0001384:0;Name=USP9YP27;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18694960	18695339	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=CHM13_chrY_T0001384;gene_id=CHM13_chrY_G0000461;Parent=CHM13_chrY_T0001384;transcript_name=CHM13_chrY_T0001384;gene_name=USP9YP27;ID=intron:CHM13_chrY_T0001384:0;Name=USP9YP27;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18695340	18695510	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=CHM13_chrY_T0001384;gene_id=CHM13_chrY_G0000461;Parent=CHM13_chrY_T0001384;transcript_name=CHM13_chrY_T0001384;gene_name=USP9YP27;ID=exon:CHM13_chrY_T0001384:1;Name=USP9YP27;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18695511	18695710	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=CHM13_chrY_T0001384;gene_id=CHM13_chrY_G0000461;Parent=CHM13_chrY_T0001384;transcript_name=CHM13_chrY_T0001384;gene_name=USP9YP27;ID=intron:CHM13_chrY_T0001384:1;Name=USP9YP27;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18695711	18695739	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=CHM13_chrY_T0001384;gene_id=CHM13_chrY_G0000461;Parent=CHM13_chrY_T0001384;transcript_name=CHM13_chrY_T0001384;gene_name=USP9YP27;ID=exon:CHM13_chrY_T0001384:2;Name=USP9YP27;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18695740	18695891	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=CHM13_chrY_T0001384;gene_id=CHM13_chrY_G0000461;Parent=CHM13_chrY_T0001384;transcript_name=CHM13_chrY_T0001384;gene_name=USP9YP27;ID=intron:CHM13_chrY_T0001384:2;Name=USP9YP27;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18695892	18696033	.	-	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=CHM13_chrY_T0001384;gene_id=CHM13_chrY_G0000461;Parent=CHM13_chrY_T0001384;transcript_name=CHM13_chrY_T0001384;gene_name=USP9YP27;ID=exon:CHM13_chrY_T0001384:3;Name=USP9YP27;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18695552	18695711	.	-	.	source_gene_common_name=RNU1-128P;source_gene=ENSG00000252513.1;gene_id=CHM13_chrY_G0000462;gene_biotype=snRNA;gene_name=RNU1-128P;gene_sources=liftoff;ID=CHM13_chrY_G0000462;Name=RNU1-128P
CHM13_chrY	CAT	transcript	18695552	18695711	1000	-	.	source_transcript=ENST00000516704.1;source_transcript_name=RNU1-128P-201;source_gene=ENSG00000252513.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252513.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516704.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-128P;transcript_id=CHM13_chrY_T0001385;gene_id=CHM13_chrY_G0000462;Parent=CHM13_chrY_G0000462;transcript_name=CHM13_chrY_T0001385;gene_name=RNU1-128P;ID=CHM13_chrY_T0001385;Name=RNU1-128P
CHM13_chrY	CAT	exon	18695552	18695711	.	-	.	source_transcript=ENST00000516704.1;source_transcript_name=RNU1-128P-201;source_gene=ENSG00000252513.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252513.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-128P;transcript_id=CHM13_chrY_T0001385;gene_id=CHM13_chrY_G0000462;Parent=CHM13_chrY_T0001385;transcript_name=CHM13_chrY_T0001385;gene_name=RNU1-128P;ID=exon:CHM13_chrY_T0001385:0;Name=RNU1-128P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18704532	18707245	.	-	.	source_gene_common_name=TRAPPC2P3;source_gene=ENSG00000224964.1;alternative_source_transcripts=ENST00000443200.1,ENST00000443200.1;gene_id=CHM13_chrY_G0000463;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P3;gene_sources=liftoff;ID=CHM13_chrY_G0000463;Name=TRAPPC2P3
CHM13_chrY	CAT	transcript	18704532	18707245	1000	-	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1,ENST00000443200.1;transcript_id=CHM13_chrY_T0001386;gene_id=CHM13_chrY_G0000463;Parent=CHM13_chrY_G0000463;transcript_name=CHM13_chrY_T0001386;gene_name=TRAPPC2P3;ID=CHM13_chrY_T0001386;Name=TRAPPC2P3
CHM13_chrY	CAT	exon	18704532	18704617	.	-	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1,ENST00000443200.1;transcript_id=CHM13_chrY_T0001386;gene_id=CHM13_chrY_G0000463;Parent=CHM13_chrY_T0001386;transcript_name=CHM13_chrY_T0001386;gene_name=TRAPPC2P3;ID=exon:CHM13_chrY_T0001386:0;Name=TRAPPC2P3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18704618	18705058	.	-	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1,ENST00000443200.1;transcript_id=CHM13_chrY_T0001386;gene_id=CHM13_chrY_G0000463;Parent=CHM13_chrY_T0001386;transcript_name=CHM13_chrY_T0001386;gene_name=TRAPPC2P3;ID=intron:CHM13_chrY_T0001386:0;Name=TRAPPC2P3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18705059	18705200	.	-	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1,ENST00000443200.1;transcript_id=CHM13_chrY_T0001386;gene_id=CHM13_chrY_G0000463;Parent=CHM13_chrY_T0001386;transcript_name=CHM13_chrY_T0001386;gene_name=TRAPPC2P3;ID=exon:CHM13_chrY_T0001386:1;Name=TRAPPC2P3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18705201	18707152	.	-	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1,ENST00000443200.1;transcript_id=CHM13_chrY_T0001386;gene_id=CHM13_chrY_G0000463;Parent=CHM13_chrY_T0001386;transcript_name=CHM13_chrY_T0001386;gene_name=TRAPPC2P3;ID=intron:CHM13_chrY_T0001386:1;Name=TRAPPC2P3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18707153	18707245	.	-	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1,ENST00000443200.1;transcript_id=CHM13_chrY_T0001386;gene_id=CHM13_chrY_G0000463;Parent=CHM13_chrY_T0001386;transcript_name=CHM13_chrY_T0001386;gene_name=TRAPPC2P3;ID=exon:CHM13_chrY_T0001386:2;Name=TRAPPC2P3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18716355	18731878	.	+	.	source_gene_common_name=OFD1P1Y;source_gene=ENSG00000226011.1;gene_id=CHM13_chrY_G0000464;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P1Y;gene_sources=liftoff;ID=CHM13_chrY_G0000464;Name=OFD1P1Y
CHM13_chrY	CAT	transcript	18716355	18731878	1000	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_G0000464;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=CHM13_chrY_T0001387;Name=OFD1P1Y
CHM13_chrY	CAT	exon	18716355	18716454	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=exon:CHM13_chrY_T0001387:0;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18716455	18717674	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=intron:CHM13_chrY_T0001387:0;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18717675	18717875	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=exon:CHM13_chrY_T0001387:1;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18717876	18720069	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=intron:CHM13_chrY_T0001387:1;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18720070	18720137	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=exon:CHM13_chrY_T0001387:2;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18720138	18720222	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=intron:CHM13_chrY_T0001387:2;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18720223	18720253	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=exon:CHM13_chrY_T0001387:3;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18720254	18721776	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=intron:CHM13_chrY_T0001387:3;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18721777	18721913	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=exon:CHM13_chrY_T0001387:4;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18721914	18722237	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=intron:CHM13_chrY_T0001387:4;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18722238	18722384	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=exon:CHM13_chrY_T0001387:5;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18722385	18725473	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=intron:CHM13_chrY_T0001387:5;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18725474	18725579	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=exon:CHM13_chrY_T0001387:6;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18725580	18726883	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=intron:CHM13_chrY_T0001387:6;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18726884	18727003	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=exon:CHM13_chrY_T0001387:7;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18727004	18728840	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=intron:CHM13_chrY_T0001387:7;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18728841	18728914	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=exon:CHM13_chrY_T0001387:8;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18728915	18730018	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=intron:CHM13_chrY_T0001387:8;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18730019	18730110	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=exon:CHM13_chrY_T0001387:9;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18730111	18731729	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=intron:CHM13_chrY_T0001387:9;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18731730	18731878	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=CHM13_chrY_T0001387;gene_id=CHM13_chrY_G0000464;Parent=CHM13_chrY_T0001387;transcript_name=CHM13_chrY_T0001387;gene_name=OFD1P1Y;ID=exon:CHM13_chrY_T0001387:10;Name=OFD1P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18724984	18731876	.	+	.	source_gene_common_name=ENSG00000300757;source_gene=ENSG00000300757.1;gene_id=CHM13_chrY_G0000465;gene_biotype=lncRNA;gene_name=ENSG00000300757;gene_sources=liftoff;ID=CHM13_chrY_G0000465;Name=ENSG00000300757
CHM13_chrY	CAT	transcript	18724984	18727079	1000	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001388;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_G0000465;transcript_name=CHM13_chrY_T0001388;gene_name=ENSG00000300757;ID=CHM13_chrY_T0001388;Name=ENSG00000300757
CHM13_chrY	CAT	exon	18724984	18725067	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001388;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001388;transcript_name=CHM13_chrY_T0001388;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001388:0;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18725068	18725170	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001388;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001388;transcript_name=CHM13_chrY_T0001388;gene_name=ENSG00000300757;ID=intron:CHM13_chrY_T0001388:0;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18725171	18725311	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001388;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001388;transcript_name=CHM13_chrY_T0001388;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001388:1;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18725312	18726884	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001388;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001388;transcript_name=CHM13_chrY_T0001388;gene_name=ENSG00000300757;ID=intron:CHM13_chrY_T0001388:1;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18726885	18727079	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001388;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001388;transcript_name=CHM13_chrY_T0001388;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001388:2;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18725192	18727076	1000	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001389;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_G0000465;transcript_name=CHM13_chrY_T0001389;gene_name=ENSG00000300757;ID=CHM13_chrY_T0001389;Name=ENSG00000300757
CHM13_chrY	CAT	exon	18725192	18725311	.	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001389;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001389;transcript_name=CHM13_chrY_T0001389;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001389:0;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18725312	18726884	.	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001389;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001389;transcript_name=CHM13_chrY_T0001389;gene_name=ENSG00000300757;ID=intron:CHM13_chrY_T0001389:0;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18726885	18727076	.	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001389;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001389;transcript_name=CHM13_chrY_T0001389;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001389:1;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18726494	18731876	1000	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001390;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_G0000465;transcript_name=CHM13_chrY_T0001390;gene_name=ENSG00000300757;ID=CHM13_chrY_T0001390;Name=ENSG00000300757
CHM13_chrY	CAT	exon	18726494	18726611	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001390;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001390;transcript_name=CHM13_chrY_T0001390;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001390:0;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18726612	18726884	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001390;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001390;transcript_name=CHM13_chrY_T0001390;gene_name=ENSG00000300757;ID=intron:CHM13_chrY_T0001390:0;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18726885	18727028	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001390;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001390;transcript_name=CHM13_chrY_T0001390;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001390:1;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18727029	18728840	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001390;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001390;transcript_name=CHM13_chrY_T0001390;gene_name=ENSG00000300757;ID=intron:CHM13_chrY_T0001390:1;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18728841	18728914	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001390;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001390;transcript_name=CHM13_chrY_T0001390;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001390:2;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18728915	18731729	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001390;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001390;transcript_name=CHM13_chrY_T0001390;gene_name=ENSG00000300757;ID=intron:CHM13_chrY_T0001390:2;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18731730	18731876	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001390;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001390;transcript_name=CHM13_chrY_T0001390;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001390:3;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18726499	18731769	1000	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001391;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_G0000465;transcript_name=CHM13_chrY_T0001391;gene_name=ENSG00000300757;ID=CHM13_chrY_T0001391;Name=ENSG00000300757
CHM13_chrY	CAT	exon	18726499	18726611	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001391;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001391;transcript_name=CHM13_chrY_T0001391;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001391:0;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18726612	18726884	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001391;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001391;transcript_name=CHM13_chrY_T0001391;gene_name=ENSG00000300757;ID=intron:CHM13_chrY_T0001391:0;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18726885	18727003	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001391;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001391;transcript_name=CHM13_chrY_T0001391;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001391:1;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18727004	18728397	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001391;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001391;transcript_name=CHM13_chrY_T0001391;gene_name=ENSG00000300757;ID=intron:CHM13_chrY_T0001391:1;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18728398	18728473	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001391;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001391;transcript_name=CHM13_chrY_T0001391;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001391:2;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18728474	18728840	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001391;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001391;transcript_name=CHM13_chrY_T0001391;gene_name=ENSG00000300757;ID=intron:CHM13_chrY_T0001391:2;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18728841	18728914	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001391;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001391;transcript_name=CHM13_chrY_T0001391;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001391:3;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18728915	18731729	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001391;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001391;transcript_name=CHM13_chrY_T0001391;gene_name=ENSG00000300757;ID=intron:CHM13_chrY_T0001391:3;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18731730	18731769	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=CHM13_chrY_T0001391;gene_id=CHM13_chrY_G0000465;Parent=CHM13_chrY_T0001391;transcript_name=CHM13_chrY_T0001391;gene_name=ENSG00000300757;ID=exon:CHM13_chrY_T0001391:4;Name=ENSG00000300757;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18743757	18744084	.	-	.	source_gene_common_name=ELOCP6;source_gene=ENSG00000225740.1;alternative_source_transcripts=ENST00000429066.1,ENST00000429066.1;gene_id=CHM13_chrY_G0000466;gene_biotype=processed_pseudogene;gene_name=ELOCP6;gene_sources=liftoff;ID=CHM13_chrY_G0000466;Name=ELOCP6
CHM13_chrY	CAT	transcript	18743757	18744084	1000	-	.	source_transcript=ENST00000429066.1;source_transcript_name=ELOCP6-201;source_gene=ENSG00000225740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000429066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429066.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP6;alternative_source_transcripts=ENST00000429066.1,ENST00000429066.1;transcript_id=CHM13_chrY_T0001392;gene_id=CHM13_chrY_G0000466;Parent=CHM13_chrY_G0000466;transcript_name=CHM13_chrY_T0001392;gene_name=ELOCP6;ID=CHM13_chrY_T0001392;Name=ELOCP6
CHM13_chrY	CAT	exon	18743757	18744084	.	-	.	source_transcript=ENST00000429066.1;source_transcript_name=ELOCP6-201;source_gene=ENSG00000225740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000429066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429066.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP6;alternative_source_transcripts=ENST00000429066.1,ENST00000429066.1;transcript_id=CHM13_chrY_T0001392;gene_id=CHM13_chrY_G0000466;Parent=CHM13_chrY_T0001392;transcript_name=CHM13_chrY_T0001392;gene_name=ELOCP6;ID=exon:CHM13_chrY_T0001392:0;Name=ELOCP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18784818	18786778	.	-	.	source_gene_common_name=CDY2B;source_gene=ENSG00000129873.8;alternative_source_transcripts=ENST00000382867.4,ENST00000382867.4;gene_id=CHM13_chrY_G0000467;gene_biotype=protein_coding;gene_name=CDY2B;gene_sources=liftoff;ID=CHM13_chrY_G0000467;Name=CDY2B
CHM13_chrY	CAT	transcript	18784818	18786778	100	-	.	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4,ENST00000382867.4;transcript_id=CHM13_chrY_T0001393;gene_id=CHM13_chrY_G0000467;Parent=CHM13_chrY_G0000467;transcript_name=CHM13_chrY_T0001393;gene_name=CDY2B;ID=CHM13_chrY_T0001393;Name=CDY2B
CHM13_chrY	CAT	exon	18784818	18786778	.	-	.	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4,ENST00000382867.4;transcript_id=CHM13_chrY_T0001393;gene_id=CHM13_chrY_G0000467;Parent=CHM13_chrY_T0001393;transcript_name=CHM13_chrY_T0001393;gene_name=CDY2B;ID=exon:CHM13_chrY_T0001393:0;Name=CDY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	18784825	18786450	.	-	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4,ENST00000382867.4;transcript_id=CHM13_chrY_T0001393;gene_id=CHM13_chrY_G0000467;Parent=CHM13_chrY_T0001393;transcript_name=CHM13_chrY_T0001393;gene_name=CDY2B;ID=CDS:CHM13_chrY_T0001393:0;Name=CDY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	18784825	18784827	.	-	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4,ENST00000382867.4;transcript_id=CHM13_chrY_T0001393;gene_id=CHM13_chrY_G0000467;Parent=CHM13_chrY_T0001393;transcript_name=CHM13_chrY_T0001393;gene_name=CDY2B;ID=stop_codon:CHM13_chrY_T0001393;Name=CDY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	18786448	18786450	.	-	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4,ENST00000382867.4;transcript_id=CHM13_chrY_T0001393;gene_id=CHM13_chrY_G0000467;Parent=CHM13_chrY_T0001393;transcript_name=CHM13_chrY_T0001393;gene_name=CDY2B;ID=start_codon:CHM13_chrY_T0001393;Name=CDY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18788657	18790263	.	-	.	source_gene_common_name=CDY6P;source_gene=ENSG00000229138.1;alternative_source_transcripts=ENST00000413320.1,ENST00000413320.1;gene_id=CHM13_chrY_G0000468;gene_biotype=unprocessed_pseudogene;gene_name=CDY6P;gene_sources=liftoff;ID=CHM13_chrY_G0000468;Name=CDY6P
CHM13_chrY	CAT	transcript	18788657	18790263	1000	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=299.921;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1,ENST00000413320.1;transcript_id=CHM13_chrY_T0001394;gene_id=CHM13_chrY_G0000468;Parent=CHM13_chrY_G0000468;transcript_name=CHM13_chrY_T0001394;gene_name=CDY6P;ID=CHM13_chrY_T0001394;Name=CDY6P
CHM13_chrY	CAT	exon	18788657	18789856	.	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1,ENST00000413320.1;transcript_id=CHM13_chrY_T0001394;gene_id=CHM13_chrY_G0000468;Parent=CHM13_chrY_T0001394;transcript_name=CHM13_chrY_T0001394;gene_name=CDY6P;ID=exon:CHM13_chrY_T0001394:0;Name=CDY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18789857	18790197	.	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1,ENST00000413320.1;transcript_id=CHM13_chrY_T0001394;gene_id=CHM13_chrY_G0000468;Parent=CHM13_chrY_T0001394;transcript_name=CHM13_chrY_T0001394;gene_name=CDY6P;ID=intron:CHM13_chrY_T0001394:0;Name=CDY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18790198	18790263	.	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1,ENST00000413320.1;transcript_id=CHM13_chrY_T0001394;gene_id=CHM13_chrY_G0000468;Parent=CHM13_chrY_T0001394;transcript_name=CHM13_chrY_T0001394;gene_name=CDY6P;ID=exon:CHM13_chrY_T0001394:1;Name=CDY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18815309	18817357	.	+	.	source_gene_common_name=USP9YP7;source_gene=ENSG00000224485.1;alternative_source_transcripts=ENST00000436723.1,ENST00000436723.1;gene_id=CHM13_chrY_G0000469;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP7;gene_sources=liftoff;ID=CHM13_chrY_G0000469;Name=USP9YP7
CHM13_chrY	CAT	transcript	18815309	18817357	1000	+	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1,ENST00000436723.1;transcript_id=CHM13_chrY_T0001395;gene_id=CHM13_chrY_G0000469;Parent=CHM13_chrY_G0000469;transcript_name=CHM13_chrY_T0001395;gene_name=USP9YP7;ID=CHM13_chrY_T0001395;Name=USP9YP7
CHM13_chrY	CAT	exon	18815309	18815529	.	+	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1,ENST00000436723.1;transcript_id=CHM13_chrY_T0001395;gene_id=CHM13_chrY_G0000469;Parent=CHM13_chrY_T0001395;transcript_name=CHM13_chrY_T0001395;gene_name=USP9YP7;ID=exon:CHM13_chrY_T0001395:0;Name=USP9YP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18815530	18817148	.	+	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1,ENST00000436723.1;transcript_id=CHM13_chrY_T0001395;gene_id=CHM13_chrY_G0000469;Parent=CHM13_chrY_T0001395;transcript_name=CHM13_chrY_T0001395;gene_name=USP9YP7;ID=intron:CHM13_chrY_T0001395:0;Name=USP9YP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18817149	18817357	.	+	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1,ENST00000436723.1;transcript_id=CHM13_chrY_T0001395;gene_id=CHM13_chrY_G0000469;Parent=CHM13_chrY_T0001395;transcript_name=CHM13_chrY_T0001395;gene_name=USP9YP7;ID=exon:CHM13_chrY_T0001395:1;Name=USP9YP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18819274	18828215	.	-	.	source_gene_common_name=USP9YP6;source_gene=ENSG00000226116.1;alternative_source_transcripts=ENST00000413550.1,ENST00000413550.1;gene_id=CHM13_chrY_G0000470;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP6;gene_sources=liftoff;ID=CHM13_chrY_G0000470;Name=USP9YP6
CHM13_chrY	CAT	transcript	18819274	18828215	1000	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1,ENST00000413550.1;transcript_id=CHM13_chrY_T0001396;gene_id=CHM13_chrY_G0000470;Parent=CHM13_chrY_G0000470;transcript_name=CHM13_chrY_T0001396;gene_name=USP9YP6;ID=CHM13_chrY_T0001396;Name=USP9YP6
CHM13_chrY	CAT	exon	18819274	18819398	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1,ENST00000413550.1;transcript_id=CHM13_chrY_T0001396;gene_id=CHM13_chrY_G0000470;Parent=CHM13_chrY_T0001396;transcript_name=CHM13_chrY_T0001396;gene_name=USP9YP6;ID=exon:CHM13_chrY_T0001396:0;Name=USP9YP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18819399	18821538	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1,ENST00000413550.1;transcript_id=CHM13_chrY_T0001396;gene_id=CHM13_chrY_G0000470;Parent=CHM13_chrY_T0001396;transcript_name=CHM13_chrY_T0001396;gene_name=USP9YP6;ID=intron:CHM13_chrY_T0001396:0;Name=USP9YP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18821539	18821623	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1,ENST00000413550.1;transcript_id=CHM13_chrY_T0001396;gene_id=CHM13_chrY_G0000470;Parent=CHM13_chrY_T0001396;transcript_name=CHM13_chrY_T0001396;gene_name=USP9YP6;ID=exon:CHM13_chrY_T0001396:1;Name=USP9YP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18821624	18823607	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1,ENST00000413550.1;transcript_id=CHM13_chrY_T0001396;gene_id=CHM13_chrY_G0000470;Parent=CHM13_chrY_T0001396;transcript_name=CHM13_chrY_T0001396;gene_name=USP9YP6;ID=intron:CHM13_chrY_T0001396:1;Name=USP9YP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18823608	18823808	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1,ENST00000413550.1;transcript_id=CHM13_chrY_T0001396;gene_id=CHM13_chrY_G0000470;Parent=CHM13_chrY_T0001396;transcript_name=CHM13_chrY_T0001396;gene_name=USP9YP6;ID=exon:CHM13_chrY_T0001396:2;Name=USP9YP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18823809	18825608	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1,ENST00000413550.1;transcript_id=CHM13_chrY_T0001396;gene_id=CHM13_chrY_G0000470;Parent=CHM13_chrY_T0001396;transcript_name=CHM13_chrY_T0001396;gene_name=USP9YP6;ID=intron:CHM13_chrY_T0001396:2;Name=USP9YP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18825609	18825829	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1,ENST00000413550.1;transcript_id=CHM13_chrY_T0001396;gene_id=CHM13_chrY_G0000470;Parent=CHM13_chrY_T0001396;transcript_name=CHM13_chrY_T0001396;gene_name=USP9YP6;ID=exon:CHM13_chrY_T0001396:3;Name=USP9YP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18825830	18827993	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1,ENST00000413550.1;transcript_id=CHM13_chrY_T0001396;gene_id=CHM13_chrY_G0000470;Parent=CHM13_chrY_T0001396;transcript_name=CHM13_chrY_T0001396;gene_name=USP9YP6;ID=intron:CHM13_chrY_T0001396:3;Name=USP9YP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18827994	18828215	.	-	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1,ENST00000413550.1;transcript_id=CHM13_chrY_T0001396;gene_id=CHM13_chrY_G0000470;Parent=CHM13_chrY_T0001396;transcript_name=CHM13_chrY_T0001396;gene_name=USP9YP6;ID=exon:CHM13_chrY_T0001396:4;Name=USP9YP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18858131	18860042	.	+	.	source_gene_common_name=CDY7P;source_gene=ENSG00000237558.1;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;gene_id=CHM13_chrY_G0000471;gene_biotype=unprocessed_pseudogene;gene_name=CDY7P;gene_sources=liftoff;ID=CHM13_chrY_G0000471;Name=CDY7P
CHM13_chrY	CAT	transcript	18858131	18860042	1000	+	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=CHM13_chrY_T0001397;gene_id=CHM13_chrY_G0000471;Parent=CHM13_chrY_G0000471;transcript_name=CHM13_chrY_T0001397;gene_name=CDY7P;ID=CHM13_chrY_T0001397;Name=CDY7P
CHM13_chrY	CAT	exon	18858131	18858295	.	+	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=CHM13_chrY_T0001397;gene_id=CHM13_chrY_G0000471;Parent=CHM13_chrY_T0001397;transcript_name=CHM13_chrY_T0001397;gene_name=CDY7P;ID=exon:CHM13_chrY_T0001397:0;Name=CDY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18858296	18858603	.	+	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=CHM13_chrY_T0001397;gene_id=CHM13_chrY_G0000471;Parent=CHM13_chrY_T0001397;transcript_name=CHM13_chrY_T0001397;gene_name=CDY7P;ID=intron:CHM13_chrY_T0001397:0;Name=CDY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18858604	18860042	.	+	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=CHM13_chrY_T0001397;gene_id=CHM13_chrY_G0000471;Parent=CHM13_chrY_T0001397;transcript_name=CHM13_chrY_T0001397;gene_name=CDY7P;ID=exon:CHM13_chrY_T0001397:1;Name=CDY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18890842	18899758	.	+	.	source_gene_common_name=USP9YP34;source_gene=ENSG00000233378.1;alternative_source_transcripts=ENST00000453983.1,ENST00000453983.1;gene_id=CHM13_chrY_G0000472;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP34;gene_sources=liftoff;ID=CHM13_chrY_G0000472;Name=USP9YP34
CHM13_chrY	CAT	transcript	18890842	18899758	1000	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1,ENST00000453983.1;transcript_id=CHM13_chrY_T0001398;gene_id=CHM13_chrY_G0000472;Parent=CHM13_chrY_G0000472;transcript_name=CHM13_chrY_T0001398;gene_name=USP9YP34;ID=CHM13_chrY_T0001398;Name=USP9YP34
CHM13_chrY	CAT	exon	18890842	18891062	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1,ENST00000453983.1;transcript_id=CHM13_chrY_T0001398;gene_id=CHM13_chrY_G0000472;Parent=CHM13_chrY_T0001398;transcript_name=CHM13_chrY_T0001398;gene_name=USP9YP34;ID=exon:CHM13_chrY_T0001398:0;Name=USP9YP34;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18891063	18893229	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1,ENST00000453983.1;transcript_id=CHM13_chrY_T0001398;gene_id=CHM13_chrY_G0000472;Parent=CHM13_chrY_T0001398;transcript_name=CHM13_chrY_T0001398;gene_name=USP9YP34;ID=intron:CHM13_chrY_T0001398:0;Name=USP9YP34;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18893230	18893448	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1,ENST00000453983.1;transcript_id=CHM13_chrY_T0001398;gene_id=CHM13_chrY_G0000472;Parent=CHM13_chrY_T0001398;transcript_name=CHM13_chrY_T0001398;gene_name=USP9YP34;ID=exon:CHM13_chrY_T0001398:1;Name=USP9YP34;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18893449	18895248	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1,ENST00000453983.1;transcript_id=CHM13_chrY_T0001398;gene_id=CHM13_chrY_G0000472;Parent=CHM13_chrY_T0001398;transcript_name=CHM13_chrY_T0001398;gene_name=USP9YP34;ID=intron:CHM13_chrY_T0001398:1;Name=USP9YP34;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18895249	18895438	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1,ENST00000453983.1;transcript_id=CHM13_chrY_T0001398;gene_id=CHM13_chrY_G0000472;Parent=CHM13_chrY_T0001398;transcript_name=CHM13_chrY_T0001398;gene_name=USP9YP34;ID=exon:CHM13_chrY_T0001398:2;Name=USP9YP34;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18895439	18897435	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1,ENST00000453983.1;transcript_id=CHM13_chrY_T0001398;gene_id=CHM13_chrY_G0000472;Parent=CHM13_chrY_T0001398;transcript_name=CHM13_chrY_T0001398;gene_name=USP9YP34;ID=intron:CHM13_chrY_T0001398:2;Name=USP9YP34;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18897436	18897520	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1,ENST00000453983.1;transcript_id=CHM13_chrY_T0001398;gene_id=CHM13_chrY_G0000472;Parent=CHM13_chrY_T0001398;transcript_name=CHM13_chrY_T0001398;gene_name=USP9YP34;ID=exon:CHM13_chrY_T0001398:3;Name=USP9YP34;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18897521	18899665	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1,ENST00000453983.1;transcript_id=CHM13_chrY_T0001398;gene_id=CHM13_chrY_G0000472;Parent=CHM13_chrY_T0001398;transcript_name=CHM13_chrY_T0001398;gene_name=USP9YP34;ID=intron:CHM13_chrY_T0001398:3;Name=USP9YP34;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18899666	18899758	.	+	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;alternative_source_transcripts=ENST00000453983.1,ENST00000453983.1;transcript_id=CHM13_chrY_T0001398;gene_id=CHM13_chrY_G0000472;Parent=CHM13_chrY_T0001398;transcript_name=CHM13_chrY_T0001398;gene_name=USP9YP34;ID=exon:CHM13_chrY_T0001398:4;Name=USP9YP34;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18901683	18903731	.	-	.	source_gene_common_name=USP9YP32;source_gene=ENSG00000237616.1;alternative_source_transcripts=ENST00000452432.1,ENST00000452432.1;gene_id=CHM13_chrY_G0000473;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP32;gene_sources=liftoff;ID=CHM13_chrY_G0000473;Name=USP9YP32
CHM13_chrY	CAT	transcript	18901683	18903731	1000	-	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000452432.1,ENST00000452432.1;transcript_id=CHM13_chrY_T0001399;gene_id=CHM13_chrY_G0000473;Parent=CHM13_chrY_G0000473;transcript_name=CHM13_chrY_T0001399;gene_name=USP9YP32;ID=CHM13_chrY_T0001399;Name=USP9YP32
CHM13_chrY	CAT	exon	18901683	18901891	.	-	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000452432.1,ENST00000452432.1;transcript_id=CHM13_chrY_T0001399;gene_id=CHM13_chrY_G0000473;Parent=CHM13_chrY_T0001399;transcript_name=CHM13_chrY_T0001399;gene_name=USP9YP32;ID=exon:CHM13_chrY_T0001399:0;Name=USP9YP32;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18901892	18903510	.	-	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000452432.1,ENST00000452432.1;transcript_id=CHM13_chrY_T0001399;gene_id=CHM13_chrY_G0000473;Parent=CHM13_chrY_T0001399;transcript_name=CHM13_chrY_T0001399;gene_name=USP9YP32;ID=intron:CHM13_chrY_T0001399:0;Name=USP9YP32;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18903511	18903731	.	-	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000452432.1,ENST00000452432.1;transcript_id=CHM13_chrY_T0001399;gene_id=CHM13_chrY_G0000473;Parent=CHM13_chrY_T0001399;transcript_name=CHM13_chrY_T0001399;gene_name=USP9YP32;ID=exon:CHM13_chrY_T0001399:1;Name=USP9YP32;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18928777	18930383	.	+	.	source_gene_common_name=CDY8P;source_gene=ENSG00000224033.1;alternative_source_transcripts=ENST00000428380.1,ENST00000428380.1;gene_id=CHM13_chrY_G0000474;gene_biotype=unprocessed_pseudogene;gene_name=CDY8P;gene_sources=liftoff;ID=CHM13_chrY_G0000474;Name=CDY8P
CHM13_chrY	CAT	transcript	18928777	18930383	1000	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=299.922;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1,ENST00000428380.1;transcript_id=CHM13_chrY_T0001400;gene_id=CHM13_chrY_G0000474;Parent=CHM13_chrY_G0000474;transcript_name=CHM13_chrY_T0001400;gene_name=CDY8P;ID=CHM13_chrY_T0001400;Name=CDY8P
CHM13_chrY	CAT	exon	18928777	18928842	.	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=299.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1,ENST00000428380.1;transcript_id=CHM13_chrY_T0001400;gene_id=CHM13_chrY_G0000474;Parent=CHM13_chrY_T0001400;transcript_name=CHM13_chrY_T0001400;gene_name=CDY8P;ID=exon:CHM13_chrY_T0001400:0;Name=CDY8P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18928843	18929170	.	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=299.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1,ENST00000428380.1;transcript_id=CHM13_chrY_T0001400;gene_id=CHM13_chrY_G0000474;Parent=CHM13_chrY_T0001400;transcript_name=CHM13_chrY_T0001400;gene_name=CDY8P;ID=intron:CHM13_chrY_T0001400:0;Name=CDY8P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18929171	18930383	.	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=299.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1,ENST00000428380.1;transcript_id=CHM13_chrY_T0001400;gene_id=CHM13_chrY_G0000474;Parent=CHM13_chrY_T0001400;transcript_name=CHM13_chrY_T0001400;gene_name=CDY8P;ID=exon:CHM13_chrY_T0001400:1;Name=CDY8P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18932262	18934221	.	+	.	source_gene_common_name=CDY2A;source_gene=ENSG00000182415.11;alternative_source_transcripts=ENST00000250838.6,ENST00000250838.6;gene_id=CHM13_chrY_G0000475;gene_biotype=protein_coding;gene_name=CDY2A;gene_sources=liftoff;ID=CHM13_chrY_G0000475;Name=CDY2A
CHM13_chrY	CAT	transcript	18932262	18934221	100	+	.	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6,ENST00000250838.6;transcript_id=CHM13_chrY_T0001401;gene_id=CHM13_chrY_G0000475;Parent=CHM13_chrY_G0000475;transcript_name=CHM13_chrY_T0001401;gene_name=CDY2A;ID=CHM13_chrY_T0001401;Name=CDY2A
CHM13_chrY	CAT	exon	18932262	18934221	.	+	.	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6,ENST00000250838.6;transcript_id=CHM13_chrY_T0001401;gene_id=CHM13_chrY_G0000475;Parent=CHM13_chrY_T0001401;transcript_name=CHM13_chrY_T0001401;gene_name=CDY2A;ID=exon:CHM13_chrY_T0001401:0;Name=CDY2A;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	18932590	18934215	.	+	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6,ENST00000250838.6;transcript_id=CHM13_chrY_T0001401;gene_id=CHM13_chrY_G0000475;Parent=CHM13_chrY_T0001401;transcript_name=CHM13_chrY_T0001401;gene_name=CDY2A;ID=CDS:CHM13_chrY_T0001401:0;Name=CDY2A;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	18932590	18932592	.	+	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6,ENST00000250838.6;transcript_id=CHM13_chrY_T0001401;gene_id=CHM13_chrY_G0000475;Parent=CHM13_chrY_T0001401;transcript_name=CHM13_chrY_T0001401;gene_name=CDY2A;ID=start_codon:CHM13_chrY_T0001401;Name=CDY2A;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	18934213	18934215	.	+	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6,ENST00000250838.6;transcript_id=CHM13_chrY_T0001401;gene_id=CHM13_chrY_G0000475;Parent=CHM13_chrY_T0001401;transcript_name=CHM13_chrY_T0001401;gene_name=CDY2A;ID=stop_codon:CHM13_chrY_T0001401;Name=CDY2A;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18963239	18994610	.	-	.	source_gene_common_name=ENSG00000297434;source_gene=ENSG00000297434.1;gene_id=CHM13_chrY_G0000476;gene_biotype=lncRNA;gene_name=ENSG00000297434;gene_sources=liftoff;ID=CHM13_chrY_G0000476;Name=ENSG00000297434
CHM13_chrY	CAT	transcript	18963239	18994610	1000	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_G0000476;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=CHM13_chrY_T0001402;Name=ENSG00000297434
CHM13_chrY	CAT	exon	18963239	18963357	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001402:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18963358	18966817	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001402:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18966818	18967073	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001402:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18967074	18980003	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001402:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18980004	18980216	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001402:2;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18980217	18985661	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001402:2;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18985662	18985800	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001402:3;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18985801	18987111	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001402:3;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18987112	18987309	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001402:4;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18987310	18990125	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001402:4;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18990126	18990199	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001402:5;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18990200	18992047	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001402:5;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18992048	18992155	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001402:6;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18992156	18993727	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001402:6;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18993728	18993862	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001402:7;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18993863	18994577	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001402:7;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18994578	18994610	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001402;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001402;transcript_name=CHM13_chrY_T0001402;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001402:8;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18985738	18994502	1000	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001404;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_G0000476;transcript_name=CHM13_chrY_T0001404;gene_name=ENSG00000297434;ID=CHM13_chrY_T0001404;Name=ENSG00000297434
CHM13_chrY	CAT	exon	18985738	18985800	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001404;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001404;transcript_name=CHM13_chrY_T0001404;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001404:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18985801	18987107	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001404;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001404;transcript_name=CHM13_chrY_T0001404;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001404:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18987108	18987309	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001404;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001404;transcript_name=CHM13_chrY_T0001404;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001404:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18987310	18990125	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001404;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001404;transcript_name=CHM13_chrY_T0001404;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001404:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18990126	18990199	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001404;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001404;transcript_name=CHM13_chrY_T0001404;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001404:2;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18990200	18992047	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001404;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001404;transcript_name=CHM13_chrY_T0001404;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001404:2;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18992048	18992155	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001404;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001404;transcript_name=CHM13_chrY_T0001404;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001404:3;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18992156	18993727	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001404;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001404;transcript_name=CHM13_chrY_T0001404;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001404:3;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18993728	18993862	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001404;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001404;transcript_name=CHM13_chrY_T0001404;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001404:4;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18993863	18994172	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001404;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001404;transcript_name=CHM13_chrY_T0001404;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001404:4;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18994173	18994502	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001404;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001404;transcript_name=CHM13_chrY_T0001404;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001404:5;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18985738	18992545	1000	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001405;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_G0000476;transcript_name=CHM13_chrY_T0001405;gene_name=ENSG00000297434;ID=CHM13_chrY_T0001405;Name=ENSG00000297434
CHM13_chrY	CAT	exon	18985738	18985800	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001405;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001405;transcript_name=CHM13_chrY_T0001405;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001405:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18985801	18987107	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001405;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001405;transcript_name=CHM13_chrY_T0001405;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001405:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18987108	18987309	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001405;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001405;transcript_name=CHM13_chrY_T0001405;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001405:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18987310	18990125	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001405;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001405;transcript_name=CHM13_chrY_T0001405;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001405:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18990126	18990199	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001405;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001405;transcript_name=CHM13_chrY_T0001405;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001405:2;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18990200	18992047	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001405;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001405;transcript_name=CHM13_chrY_T0001405;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001405:2;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18992048	18992155	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001405;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001405;transcript_name=CHM13_chrY_T0001405;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001405:3;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18992156	18992427	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001405;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001405;transcript_name=CHM13_chrY_T0001405;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001405:3;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18992428	18992545	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001405;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001405;transcript_name=CHM13_chrY_T0001405;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001405:4;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18985739	18994045	1000	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001406;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_G0000476;transcript_name=CHM13_chrY_T0001406;gene_name=ENSG00000297434;ID=CHM13_chrY_T0001406;Name=ENSG00000297434
CHM13_chrY	CAT	exon	18985739	18985800	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001406;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001406;transcript_name=CHM13_chrY_T0001406;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001406:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18985801	18987111	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001406;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001406;transcript_name=CHM13_chrY_T0001406;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001406:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18987112	18987309	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001406;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001406;transcript_name=CHM13_chrY_T0001406;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001406:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18987310	18990125	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001406;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001406;transcript_name=CHM13_chrY_T0001406;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001406:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18990126	18990199	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001406;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001406;transcript_name=CHM13_chrY_T0001406;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001406:2;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18990200	18992036	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001406;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001406;transcript_name=CHM13_chrY_T0001406;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001406:2;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18992037	18992155	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001406;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001406;transcript_name=CHM13_chrY_T0001406;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001406:3;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18992156	18993727	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001406;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001406;transcript_name=CHM13_chrY_T0001406;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001406:3;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18993728	18994045	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001406;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001406;transcript_name=CHM13_chrY_T0001406;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001406:4;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18985740	18992540	1000	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001407;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_G0000476;transcript_name=CHM13_chrY_T0001407;gene_name=ENSG00000297434;ID=CHM13_chrY_T0001407;Name=ENSG00000297434
CHM13_chrY	CAT	exon	18985740	18985800	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001407;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001407;transcript_name=CHM13_chrY_T0001407;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001407:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18985801	18987107	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001407;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001407;transcript_name=CHM13_chrY_T0001407;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001407:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18987108	18987309	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001407;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001407;transcript_name=CHM13_chrY_T0001407;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001407:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18987310	18990125	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001407;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001407;transcript_name=CHM13_chrY_T0001407;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001407:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18990126	18990199	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001407;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001407;transcript_name=CHM13_chrY_T0001407;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001407:2;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18990200	18992036	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001407;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001407;transcript_name=CHM13_chrY_T0001407;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001407:2;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18992037	18992155	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001407;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001407;transcript_name=CHM13_chrY_T0001407;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001407:3;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18992156	18992427	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001407;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001407;transcript_name=CHM13_chrY_T0001407;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001407:3;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18992428	18992540	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001407;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001407;transcript_name=CHM13_chrY_T0001407;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001407:4;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18985741	18992540	1000	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001408;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_G0000476;transcript_name=CHM13_chrY_T0001408;gene_name=ENSG00000297434;ID=CHM13_chrY_T0001408;Name=ENSG00000297434
CHM13_chrY	CAT	exon	18985741	18985800	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001408;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001408;transcript_name=CHM13_chrY_T0001408;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001408:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18985801	18987107	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001408;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001408;transcript_name=CHM13_chrY_T0001408;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001408:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18987108	18987309	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001408;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001408;transcript_name=CHM13_chrY_T0001408;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001408:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18987310	18988953	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001408;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001408;transcript_name=CHM13_chrY_T0001408;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001408:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18988954	18989021	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001408;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001408;transcript_name=CHM13_chrY_T0001408;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001408:2;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18989022	18990125	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001408;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001408;transcript_name=CHM13_chrY_T0001408;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001408:2;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18990126	18990199	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001408;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001408;transcript_name=CHM13_chrY_T0001408;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001408:3;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18990200	18992047	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001408;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001408;transcript_name=CHM13_chrY_T0001408;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001408:3;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18992048	18992155	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001408;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001408;transcript_name=CHM13_chrY_T0001408;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001408:4;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18992156	18992427	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001408;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001408;transcript_name=CHM13_chrY_T0001408;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001408:4;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18992428	18992540	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001408;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001408;transcript_name=CHM13_chrY_T0001408;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001408:5;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18991961	18994055	1000	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001410;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_G0000476;transcript_name=CHM13_chrY_T0001410;gene_name=ENSG00000297434;ID=CHM13_chrY_T0001410;Name=ENSG00000297434
CHM13_chrY	CAT	exon	18991961	18992155	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001410;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001410;transcript_name=CHM13_chrY_T0001410;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001410:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18992156	18993727	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001410;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001410;transcript_name=CHM13_chrY_T0001410;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001410:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18993728	18993868	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001410;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001410;transcript_name=CHM13_chrY_T0001410;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001410:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18993869	18993971	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001410;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001410;transcript_name=CHM13_chrY_T0001410;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001410:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18993972	18994055	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001410;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001410;transcript_name=CHM13_chrY_T0001410;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001410:2;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	18991964	18993847	1000	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001411;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_G0000476;transcript_name=CHM13_chrY_T0001411;gene_name=ENSG00000297434;ID=CHM13_chrY_T0001411;Name=ENSG00000297434
CHM13_chrY	CAT	exon	18991964	18992155	.	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001411;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001411;transcript_name=CHM13_chrY_T0001411;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001411:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18992156	18993727	.	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001411;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001411;transcript_name=CHM13_chrY_T0001411;gene_name=ENSG00000297434;ID=intron:CHM13_chrY_T0001411:0;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18993728	18993847	.	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=CHM13_chrY_T0001411;gene_id=CHM13_chrY_G0000476;Parent=CHM13_chrY_T0001411;transcript_name=CHM13_chrY_T0001411;gene_name=ENSG00000297434;ID=exon:CHM13_chrY_T0001411:1;Name=ENSG00000297434;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18974952	18975279	.	+	.	source_gene_common_name=ELOCP12;source_gene=ENSG00000230412.1;alternative_source_transcripts=ENST00000458706.1,ENST00000458706.1;gene_id=CHM13_chrY_G0000477;gene_biotype=processed_pseudogene;gene_name=ELOCP12;gene_sources=liftoff;ID=CHM13_chrY_G0000477;Name=ELOCP12
CHM13_chrY	CAT	transcript	18974952	18975279	1000	+	.	source_transcript=ENST00000458706.1;source_transcript_name=ELOCP12-201;source_gene=ENSG00000230412.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230412.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458706.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP12;alternative_source_transcripts=ENST00000458706.1,ENST00000458706.1;transcript_id=CHM13_chrY_T0001403;gene_id=CHM13_chrY_G0000477;Parent=CHM13_chrY_G0000477;transcript_name=CHM13_chrY_T0001403;gene_name=ELOCP12;ID=CHM13_chrY_T0001403;Name=ELOCP12
CHM13_chrY	CAT	exon	18974952	18975279	.	+	.	source_transcript=ENST00000458706.1;source_transcript_name=ELOCP12-201;source_gene=ENSG00000230412.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230412.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458706.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP12;alternative_source_transcripts=ENST00000458706.1,ENST00000458706.1;transcript_id=CHM13_chrY_T0001403;gene_id=CHM13_chrY_G0000477;Parent=CHM13_chrY_T0001403;transcript_name=CHM13_chrY_T0001403;gene_name=ELOCP12;ID=exon:CHM13_chrY_T0001403:0;Name=ELOCP12;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	18987161	19002683	.	-	.	source_gene_common_name=OFD1P2Y;source_gene=ENSG00000226611.2;gene_id=CHM13_chrY_G0000478;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P2Y;gene_sources=liftoff;ID=CHM13_chrY_G0000478;Name=OFD1P2Y
CHM13_chrY	CAT	transcript	18987161	19002683	1000	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_G0000478;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=CHM13_chrY_T0001409;Name=OFD1P2Y
CHM13_chrY	CAT	exon	18987161	18987309	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=exon:CHM13_chrY_T0001409:0;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18987310	18988953	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=intron:CHM13_chrY_T0001409:0;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18988954	18989021	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=exon:CHM13_chrY_T0001409:1;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18989022	18990125	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=intron:CHM13_chrY_T0001409:1;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18990126	18990199	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=exon:CHM13_chrY_T0001409:2;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18990200	18992036	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=intron:CHM13_chrY_T0001409:2;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18992037	18992155	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=exon:CHM13_chrY_T0001409:3;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18992156	18993459	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=intron:CHM13_chrY_T0001409:3;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18993460	18993565	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=exon:CHM13_chrY_T0001409:4;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18993566	18996654	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=intron:CHM13_chrY_T0001409:4;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18996655	18996801	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=exon:CHM13_chrY_T0001409:5;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18996802	18997125	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=intron:CHM13_chrY_T0001409:5;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18997126	18997262	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=exon:CHM13_chrY_T0001409:6;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18997263	18998785	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=intron:CHM13_chrY_T0001409:6;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18998786	18998816	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=exon:CHM13_chrY_T0001409:7;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18998817	18998901	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=intron:CHM13_chrY_T0001409:7;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	18998902	18998969	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=exon:CHM13_chrY_T0001409:8;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	18998970	19001163	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=intron:CHM13_chrY_T0001409:8;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19001164	19001364	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=exon:CHM13_chrY_T0001409:9;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19001365	19002585	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=intron:CHM13_chrY_T0001409:9;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19002586	19002683	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=CHM13_chrY_T0001409;gene_id=CHM13_chrY_G0000478;Parent=CHM13_chrY_T0001409;transcript_name=CHM13_chrY_T0001409;gene_name=OFD1P2Y;ID=exon:CHM13_chrY_T0001409:10;Name=OFD1P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19011795	19014583	.	+	.	source_gene_common_name=TRAPPC2P8;source_gene=ENSG00000225895.1;alternative_source_transcripts=ENST00000440676.1,ENST00000440676.1;gene_id=CHM13_chrY_G0000479;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P8;gene_sources=liftoff;ID=CHM13_chrY_G0000479;Name=TRAPPC2P8
CHM13_chrY	CAT	transcript	19011795	19014583	1000	+	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;alternative_source_transcripts=ENST00000440676.1,ENST00000440676.1;transcript_id=CHM13_chrY_T0001412;gene_id=CHM13_chrY_G0000479;Parent=CHM13_chrY_G0000479;transcript_name=CHM13_chrY_T0001412;gene_name=TRAPPC2P8;ID=CHM13_chrY_T0001412;Name=TRAPPC2P8
CHM13_chrY	CAT	exon	19011795	19011887	.	+	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;alternative_source_transcripts=ENST00000440676.1,ENST00000440676.1;transcript_id=CHM13_chrY_T0001412;gene_id=CHM13_chrY_G0000479;Parent=CHM13_chrY_T0001412;transcript_name=CHM13_chrY_T0001412;gene_name=TRAPPC2P8;ID=exon:CHM13_chrY_T0001412:0;Name=TRAPPC2P8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19011888	19013836	.	+	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;alternative_source_transcripts=ENST00000440676.1,ENST00000440676.1;transcript_id=CHM13_chrY_T0001412;gene_id=CHM13_chrY_G0000479;Parent=CHM13_chrY_T0001412;transcript_name=CHM13_chrY_T0001412;gene_name=TRAPPC2P8;ID=intron:CHM13_chrY_T0001412:0;Name=TRAPPC2P8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19013837	19013983	.	+	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;alternative_source_transcripts=ENST00000440676.1,ENST00000440676.1;transcript_id=CHM13_chrY_T0001412;gene_id=CHM13_chrY_G0000479;Parent=CHM13_chrY_T0001412;transcript_name=CHM13_chrY_T0001412;gene_name=TRAPPC2P8;ID=exon:CHM13_chrY_T0001412:1;Name=TRAPPC2P8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19013984	19014427	.	+	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;alternative_source_transcripts=ENST00000440676.1,ENST00000440676.1;transcript_id=CHM13_chrY_T0001412;gene_id=CHM13_chrY_G0000479;Parent=CHM13_chrY_T0001412;transcript_name=CHM13_chrY_T0001412;gene_name=TRAPPC2P8;ID=intron:CHM13_chrY_T0001412:1;Name=TRAPPC2P8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19014428	19014583	.	+	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;alternative_source_transcripts=ENST00000440676.1,ENST00000440676.1;transcript_id=CHM13_chrY_T0001412;gene_id=CHM13_chrY_G0000479;Parent=CHM13_chrY_T0001412;transcript_name=CHM13_chrY_T0001412;gene_name=TRAPPC2P8;ID=exon:CHM13_chrY_T0001412:2;Name=TRAPPC2P8;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19023008	19024176	.	+	.	source_gene_common_name=USP9YP15;source_gene=ENSG00000233120.1;gene_id=CHM13_chrY_G0000480;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP15;gene_sources=liftoff;ID=CHM13_chrY_G0000480;Name=USP9YP15
CHM13_chrY	CAT	transcript	19023008	19024176	1000	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=CHM13_chrY_T0001413;gene_id=CHM13_chrY_G0000480;Parent=CHM13_chrY_G0000480;transcript_name=CHM13_chrY_T0001413;gene_name=USP9YP15;ID=CHM13_chrY_T0001413;Name=USP9YP15
CHM13_chrY	CAT	exon	19023008	19023145	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=CHM13_chrY_T0001413;gene_id=CHM13_chrY_G0000480;Parent=CHM13_chrY_T0001413;transcript_name=CHM13_chrY_T0001413;gene_name=USP9YP15;ID=exon:CHM13_chrY_T0001413:0;Name=USP9YP15;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19023146	19023300	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=CHM13_chrY_T0001413;gene_id=CHM13_chrY_G0000480;Parent=CHM13_chrY_T0001413;transcript_name=CHM13_chrY_T0001413;gene_name=USP9YP15;ID=intron:CHM13_chrY_T0001413:0;Name=USP9YP15;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19023301	19023329	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=CHM13_chrY_T0001413;gene_id=CHM13_chrY_G0000480;Parent=CHM13_chrY_T0001413;transcript_name=CHM13_chrY_T0001413;gene_name=USP9YP15;ID=exon:CHM13_chrY_T0001413:1;Name=USP9YP15;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19023330	19023541	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=CHM13_chrY_T0001413;gene_id=CHM13_chrY_G0000480;Parent=CHM13_chrY_T0001413;transcript_name=CHM13_chrY_T0001413;gene_name=USP9YP15;ID=intron:CHM13_chrY_T0001413:1;Name=USP9YP15;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19023542	19023700	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=CHM13_chrY_T0001413;gene_id=CHM13_chrY_G0000480;Parent=CHM13_chrY_T0001413;transcript_name=CHM13_chrY_T0001413;gene_name=USP9YP15;ID=exon:CHM13_chrY_T0001413:2;Name=USP9YP15;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19023701	19024080	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=CHM13_chrY_T0001413;gene_id=CHM13_chrY_G0000480;Parent=CHM13_chrY_T0001413;transcript_name=CHM13_chrY_T0001413;gene_name=USP9YP15;ID=intron:CHM13_chrY_T0001413:2;Name=USP9YP15;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19024081	19024176	.	+	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=CHM13_chrY_T0001413;gene_id=CHM13_chrY_G0000480;Parent=CHM13_chrY_T0001413;transcript_name=CHM13_chrY_T0001413;gene_name=USP9YP15;ID=exon:CHM13_chrY_T0001413:3;Name=USP9YP15;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19023329	19023488	.	+	.	source_gene_common_name=RNU1-95P;source_gene=ENSG00000252166.1;gene_id=CHM13_chrY_G0000481;gene_biotype=snRNA;gene_name=RNU1-95P;gene_sources=liftoff;ID=CHM13_chrY_G0000481;Name=RNU1-95P
CHM13_chrY	CAT	transcript	19023329	19023488	1000	+	.	source_transcript=ENST00000516357.1;source_transcript_name=RNU1-95P-201;source_gene=ENSG00000252166.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252166.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516357.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516357.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-95P;transcript_id=CHM13_chrY_T0001414;gene_id=CHM13_chrY_G0000481;Parent=CHM13_chrY_G0000481;transcript_name=CHM13_chrY_T0001414;gene_name=RNU1-95P;ID=CHM13_chrY_T0001414;Name=RNU1-95P
CHM13_chrY	CAT	exon	19023329	19023488	.	+	.	source_transcript=ENST00000516357.1;source_transcript_name=RNU1-95P-201;source_gene=ENSG00000252166.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252166.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516357.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516357.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-95P;transcript_id=CHM13_chrY_T0001414;gene_id=CHM13_chrY_G0000481;Parent=CHM13_chrY_T0001414;transcript_name=CHM13_chrY_T0001414;gene_name=RNU1-95P;ID=exon:CHM13_chrY_T0001414:0;Name=RNU1-95P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19027677	19030281	.	-	.	source_gene_common_name=USP9YP16;source_gene=ENSG00000232744.1;alternative_source_transcripts=ENST00000430287.1,ENST00000430287.1;gene_id=CHM13_chrY_G0000482;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP16;gene_sources=liftoff;ID=CHM13_chrY_G0000482;Name=USP9YP16
CHM13_chrY	CAT	transcript	19027677	19030281	1000	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1,ENST00000430287.1;transcript_id=CHM13_chrY_T0001415;gene_id=CHM13_chrY_G0000482;Parent=CHM13_chrY_G0000482;transcript_name=CHM13_chrY_T0001415;gene_name=USP9YP16;ID=CHM13_chrY_T0001415;Name=USP9YP16
CHM13_chrY	CAT	exon	19027677	19027865	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1,ENST00000430287.1;transcript_id=CHM13_chrY_T0001415;gene_id=CHM13_chrY_G0000482;Parent=CHM13_chrY_T0001415;transcript_name=CHM13_chrY_T0001415;gene_name=USP9YP16;ID=exon:CHM13_chrY_T0001415:0;Name=USP9YP16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19027866	19029490	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1,ENST00000430287.1;transcript_id=CHM13_chrY_T0001415;gene_id=CHM13_chrY_G0000482;Parent=CHM13_chrY_T0001415;transcript_name=CHM13_chrY_T0001415;gene_name=USP9YP16;ID=intron:CHM13_chrY_T0001415:0;Name=USP9YP16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19029491	19029582	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1,ENST00000430287.1;transcript_id=CHM13_chrY_T0001415;gene_id=CHM13_chrY_G0000482;Parent=CHM13_chrY_T0001415;transcript_name=CHM13_chrY_T0001415;gene_name=USP9YP16;ID=exon:CHM13_chrY_T0001415:1;Name=USP9YP16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19029583	19030155	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1,ENST00000430287.1;transcript_id=CHM13_chrY_T0001415;gene_id=CHM13_chrY_G0000482;Parent=CHM13_chrY_T0001415;transcript_name=CHM13_chrY_T0001415;gene_name=USP9YP16;ID=intron:CHM13_chrY_T0001415:1;Name=USP9YP16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19030156	19030281	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1,ENST00000430287.1;transcript_id=CHM13_chrY_T0001415;gene_id=CHM13_chrY_G0000482;Parent=CHM13_chrY_T0001415;transcript_name=CHM13_chrY_T0001415;gene_name=USP9YP16;ID=exon:CHM13_chrY_T0001415:2;Name=USP9YP16;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19035094	19043371	.	+	.	source_gene_common_name=XKRYP7;source_gene=ENSG00000244646.5;gene_id=CHM13_chrY_G0000483;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XKRYP7;gene_sources=liftoff;ID=CHM13_chrY_G0000483;Name=XKRYP7
CHM13_chrY	CAT	transcript	19035094	19043371	1000	+	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=CHM13_chrY_T0001416;gene_id=CHM13_chrY_G0000483;Parent=CHM13_chrY_G0000483;transcript_name=CHM13_chrY_T0001416;gene_name=XKRYP7;ID=CHM13_chrY_T0001416;Name=XKRYP7
CHM13_chrY	CAT	exon	19035094	19035428	.	+	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=CHM13_chrY_T0001416;gene_id=CHM13_chrY_G0000483;Parent=CHM13_chrY_T0001416;transcript_name=CHM13_chrY_T0001416;gene_name=XKRYP7;ID=exon:CHM13_chrY_T0001416:0;Name=XKRYP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19035429	19042613	.	+	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=CHM13_chrY_T0001416;gene_id=CHM13_chrY_G0000483;Parent=CHM13_chrY_T0001416;transcript_name=CHM13_chrY_T0001416;gene_name=XKRYP7;ID=intron:CHM13_chrY_T0001416:0;Name=XKRYP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19042614	19043371	.	+	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=CHM13_chrY_T0001416;gene_id=CHM13_chrY_G0000483;Parent=CHM13_chrY_T0001416;transcript_name=CHM13_chrY_T0001416;gene_name=XKRYP7;ID=exon:CHM13_chrY_T0001416:1;Name=XKRYP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19041934	19043514	.	+	.	source_gene_common_name=XKRYP7;source_gene=ENSG00000290725.1;gene_id=CHM13_chrY_G0000484;gene_biotype=lncRNA;gene_name=XKRYP7;gene_sources=liftoff;ID=CHM13_chrY_G0000484;Name=XKRYP7
CHM13_chrY	CAT	transcript	19041934	19043514	1000	+	.	source_transcript=ENST00000623874.1;source_transcript_name=XKRYP7-202;source_gene=ENSG00000290725.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290725.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000623874.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000623874.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=CHM13_chrY_T0001417;gene_id=CHM13_chrY_G0000484;Parent=CHM13_chrY_G0000484;transcript_name=CHM13_chrY_T0001417;gene_name=XKRYP7;ID=CHM13_chrY_T0001417;Name=XKRYP7
CHM13_chrY	CAT	exon	19041934	19043514	.	+	.	source_transcript=ENST00000623874.1;source_transcript_name=XKRYP7-202;source_gene=ENSG00000290725.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290725.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000623874.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000623874.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=CHM13_chrY_T0001417;gene_id=CHM13_chrY_G0000484;Parent=CHM13_chrY_T0001417;transcript_name=CHM13_chrY_T0001417;gene_name=XKRYP7;ID=exon:CHM13_chrY_T0001417:0;Name=XKRYP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19054369	19055493	.	+	.	source_gene_common_name=ACTG1P11;source_gene=ENSG00000229465.1;alternative_source_transcripts=ENST00000425411.1,ENST00000425411.1;gene_id=CHM13_chrY_G0000485;gene_biotype=processed_pseudogene;gene_name=ACTG1P11;gene_sources=liftoff;ID=CHM13_chrY_G0000485;Name=ACTG1P11
CHM13_chrY	CAT	transcript	19054369	19055493	1000	+	.	source_transcript=ENST00000425411.1;source_transcript_name=ACTG1P11-201;source_gene=ENSG00000229465.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229465.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425411.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425411.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P11;alternative_source_transcripts=ENST00000425411.1,ENST00000425411.1;transcript_id=CHM13_chrY_T0001418;gene_id=CHM13_chrY_G0000485;Parent=CHM13_chrY_G0000485;transcript_name=CHM13_chrY_T0001418;gene_name=ACTG1P11;ID=CHM13_chrY_T0001418;Name=ACTG1P11
CHM13_chrY	CAT	exon	19054369	19055493	.	+	.	source_transcript=ENST00000425411.1;source_transcript_name=ACTG1P11-201;source_gene=ENSG00000229465.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229465.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425411.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425411.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P11;alternative_source_transcripts=ENST00000425411.1,ENST00000425411.1;transcript_id=CHM13_chrY_T0001418;gene_id=CHM13_chrY_G0000485;Parent=CHM13_chrY_T0001418;transcript_name=CHM13_chrY_T0001418;gene_name=ACTG1P11;ID=exon:CHM13_chrY_T0001418:0;Name=ACTG1P11;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19082741	19109436	.	+	.	source_gene_common_name=ENSG00000310304;source_gene=ENSG00000310304.1;alternative_source_transcripts=ENST00000848900.1,ENST00000848900.1;gene_id=CHM13_chrY_G0000486;gene_biotype=lncRNA;gene_name=ENSG00000310304;gene_sources=liftoff;ID=CHM13_chrY_G0000486;Name=ENSG00000310304
CHM13_chrY	CAT	transcript	19082741	19094922	1000	+	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848900.1,ENST00000848900.1;transcript_id=CHM13_chrY_T0001419;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_G0000486;transcript_name=CHM13_chrY_T0001419;gene_name=ENSG00000310304;ID=CHM13_chrY_T0001419;Name=ENSG00000310304
CHM13_chrY	CAT	exon	19082741	19083182	.	+	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848900.1,ENST00000848900.1;transcript_id=CHM13_chrY_T0001419;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001419;transcript_name=CHM13_chrY_T0001419;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001419:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19083183	19093625	.	+	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848900.1,ENST00000848900.1;transcript_id=CHM13_chrY_T0001419;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001419;transcript_name=CHM13_chrY_T0001419;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001419:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19093626	19094922	.	+	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848900.1,ENST00000848900.1;transcript_id=CHM13_chrY_T0001419;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001419;transcript_name=CHM13_chrY_T0001419;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001419:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19082799	19098481	1000	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1,ENST00000848895.1;transcript_id=CHM13_chrY_T0001420;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_G0000486;transcript_name=CHM13_chrY_T0001420;gene_name=ENSG00000310304;ID=CHM13_chrY_T0001420;Name=ENSG00000310304
CHM13_chrY	CAT	exon	19082799	19083182	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1,ENST00000848895.1;transcript_id=CHM13_chrY_T0001420;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001420;transcript_name=CHM13_chrY_T0001420;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001420:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19083183	19093625	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1,ENST00000848895.1;transcript_id=CHM13_chrY_T0001420;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001420;transcript_name=CHM13_chrY_T0001420;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001420:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19093626	19093750	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1,ENST00000848895.1;transcript_id=CHM13_chrY_T0001420;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001420;transcript_name=CHM13_chrY_T0001420;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001420:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19093751	19097437	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1,ENST00000848895.1;transcript_id=CHM13_chrY_T0001420;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001420;transcript_name=CHM13_chrY_T0001420;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001420:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19097438	19098481	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1,ENST00000848895.1;transcript_id=CHM13_chrY_T0001420;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001420;transcript_name=CHM13_chrY_T0001420;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001420:2;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19082824	19098473	1000	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1,ENST00000848897.1;transcript_id=CHM13_chrY_T0001421;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_G0000486;transcript_name=CHM13_chrY_T0001421;gene_name=ENSG00000310304;ID=CHM13_chrY_T0001421;Name=ENSG00000310304
CHM13_chrY	CAT	exon	19082824	19083113	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1,ENST00000848897.1;transcript_id=CHM13_chrY_T0001421;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001421;transcript_name=CHM13_chrY_T0001421;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001421:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19083114	19093625	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1,ENST00000848897.1;transcript_id=CHM13_chrY_T0001421;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001421;transcript_name=CHM13_chrY_T0001421;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001421:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19093626	19093750	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1,ENST00000848897.1;transcript_id=CHM13_chrY_T0001421;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001421;transcript_name=CHM13_chrY_T0001421;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001421:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19093751	19097437	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1,ENST00000848897.1;transcript_id=CHM13_chrY_T0001421;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001421;transcript_name=CHM13_chrY_T0001421;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001421:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19097438	19098473	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1,ENST00000848897.1;transcript_id=CHM13_chrY_T0001421;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001421;transcript_name=CHM13_chrY_T0001421;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001421:2;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19082824	19098473	1000	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1,ENST00000848898.1;transcript_id=CHM13_chrY_T0001422;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_G0000486;transcript_name=CHM13_chrY_T0001422;gene_name=ENSG00000310304;ID=CHM13_chrY_T0001422;Name=ENSG00000310304
CHM13_chrY	CAT	exon	19082824	19083182	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1,ENST00000848898.1;transcript_id=CHM13_chrY_T0001422;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001422;transcript_name=CHM13_chrY_T0001422;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001422:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19083183	19093629	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1,ENST00000848898.1;transcript_id=CHM13_chrY_T0001422;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001422;transcript_name=CHM13_chrY_T0001422;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001422:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19093630	19093750	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1,ENST00000848898.1;transcript_id=CHM13_chrY_T0001422;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001422;transcript_name=CHM13_chrY_T0001422;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001422:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19093751	19097437	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1,ENST00000848898.1;transcript_id=CHM13_chrY_T0001422;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001422;transcript_name=CHM13_chrY_T0001422;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001422:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19097438	19098473	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1,ENST00000848898.1;transcript_id=CHM13_chrY_T0001422;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001422;transcript_name=CHM13_chrY_T0001422;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001422:2;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19082826	19098478	1000	+	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848896.1,ENST00000848896.1;transcript_id=CHM13_chrY_T0001423;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_G0000486;transcript_name=CHM13_chrY_T0001423;gene_name=ENSG00000310304;ID=CHM13_chrY_T0001423;Name=ENSG00000310304
CHM13_chrY	CAT	exon	19082826	19083182	.	+	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848896.1,ENST00000848896.1;transcript_id=CHM13_chrY_T0001423;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001423;transcript_name=CHM13_chrY_T0001423;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001423:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19083183	19097437	.	+	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848896.1,ENST00000848896.1;transcript_id=CHM13_chrY_T0001423;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001423;transcript_name=CHM13_chrY_T0001423;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001423:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19097438	19098478	.	+	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848896.1,ENST00000848896.1;transcript_id=CHM13_chrY_T0001423;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001423;transcript_name=CHM13_chrY_T0001423;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001423:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19082827	19085333	1000	+	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848904.1,ENST00000848904.1;transcript_id=CHM13_chrY_T0001424;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_G0000486;transcript_name=CHM13_chrY_T0001424;gene_name=ENSG00000310304;ID=CHM13_chrY_T0001424;Name=ENSG00000310304
CHM13_chrY	CAT	exon	19082827	19083182	.	+	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848904.1,ENST00000848904.1;transcript_id=CHM13_chrY_T0001424;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001424;transcript_name=CHM13_chrY_T0001424;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001424:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19083183	19084770	.	+	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848904.1,ENST00000848904.1;transcript_id=CHM13_chrY_T0001424;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001424;transcript_name=CHM13_chrY_T0001424;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001424:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19084771	19085333	.	+	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848904.1,ENST00000848904.1;transcript_id=CHM13_chrY_T0001424;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001424;transcript_name=CHM13_chrY_T0001424;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001424:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19082830	19094922	1000	+	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848901.1,ENST00000848901.1;transcript_id=CHM13_chrY_T0001425;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_G0000486;transcript_name=CHM13_chrY_T0001425;gene_name=ENSG00000310304;ID=CHM13_chrY_T0001425;Name=ENSG00000310304
CHM13_chrY	CAT	exon	19082830	19083113	.	+	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848901.1,ENST00000848901.1;transcript_id=CHM13_chrY_T0001425;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001425;transcript_name=CHM13_chrY_T0001425;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001425:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19083114	19093625	.	+	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848901.1,ENST00000848901.1;transcript_id=CHM13_chrY_T0001425;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001425;transcript_name=CHM13_chrY_T0001425;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001425:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19093626	19094922	.	+	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848901.1,ENST00000848901.1;transcript_id=CHM13_chrY_T0001425;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001425;transcript_name=CHM13_chrY_T0001425;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001425:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19082835	19093786	1000	+	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848902.1,ENST00000848902.1;transcript_id=CHM13_chrY_T0001426;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_G0000486;transcript_name=CHM13_chrY_T0001426;gene_name=ENSG00000310304;ID=CHM13_chrY_T0001426;Name=ENSG00000310304
CHM13_chrY	CAT	exon	19082835	19083182	.	+	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848902.1,ENST00000848902.1;transcript_id=CHM13_chrY_T0001426;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001426;transcript_name=CHM13_chrY_T0001426;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001426:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19083183	19093629	.	+	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848902.1,ENST00000848902.1;transcript_id=CHM13_chrY_T0001426;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001426;transcript_name=CHM13_chrY_T0001426;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001426:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19093630	19093786	.	+	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848902.1,ENST00000848902.1;transcript_id=CHM13_chrY_T0001426;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001426;transcript_name=CHM13_chrY_T0001426;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001426:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19082866	19109436	1000	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1,ENST00000848894.1;transcript_id=CHM13_chrY_T0001427;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_G0000486;transcript_name=CHM13_chrY_T0001427;gene_name=ENSG00000310304;ID=CHM13_chrY_T0001427;Name=ENSG00000310304
CHM13_chrY	CAT	exon	19082866	19083182	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1,ENST00000848894.1;transcript_id=CHM13_chrY_T0001427;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001427;transcript_name=CHM13_chrY_T0001427;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001427:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19083183	19106317	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1,ENST00000848894.1;transcript_id=CHM13_chrY_T0001427;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001427;transcript_name=CHM13_chrY_T0001427;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001427:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19106318	19106536	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1,ENST00000848894.1;transcript_id=CHM13_chrY_T0001427;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001427;transcript_name=CHM13_chrY_T0001427;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001427:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19106537	19107427	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1,ENST00000848894.1;transcript_id=CHM13_chrY_T0001427;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001427;transcript_name=CHM13_chrY_T0001427;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001427:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19107428	19107552	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1,ENST00000848894.1;transcript_id=CHM13_chrY_T0001427;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001427;transcript_name=CHM13_chrY_T0001427;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001427:2;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19107553	19109145	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1,ENST00000848894.1;transcript_id=CHM13_chrY_T0001427;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001427;transcript_name=CHM13_chrY_T0001427;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001427:2;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19109146	19109436	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1,ENST00000848894.1;transcript_id=CHM13_chrY_T0001427;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001427;transcript_name=CHM13_chrY_T0001427;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001427:3;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19082866	19097947	1000	+	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848899.1,ENST00000848899.1;transcript_id=CHM13_chrY_T0001428;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_G0000486;transcript_name=CHM13_chrY_T0001428;gene_name=ENSG00000310304;ID=CHM13_chrY_T0001428;Name=ENSG00000310304
CHM13_chrY	CAT	exon	19082866	19083113	.	+	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848899.1,ENST00000848899.1;transcript_id=CHM13_chrY_T0001428;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001428;transcript_name=CHM13_chrY_T0001428;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001428:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19083114	19097437	.	+	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848899.1,ENST00000848899.1;transcript_id=CHM13_chrY_T0001428;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001428;transcript_name=CHM13_chrY_T0001428;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001428:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19097438	19097947	.	+	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848899.1,ENST00000848899.1;transcript_id=CHM13_chrY_T0001428;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001428;transcript_name=CHM13_chrY_T0001428;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001428:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19082876	19088764	1000	+	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848903.1,ENST00000848903.1;transcript_id=CHM13_chrY_T0001429;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_G0000486;transcript_name=CHM13_chrY_T0001429;gene_name=ENSG00000310304;ID=CHM13_chrY_T0001429;Name=ENSG00000310304
CHM13_chrY	CAT	exon	19082876	19083182	.	+	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848903.1,ENST00000848903.1;transcript_id=CHM13_chrY_T0001429;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001429;transcript_name=CHM13_chrY_T0001429;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001429:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19083183	19088130	.	+	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848903.1,ENST00000848903.1;transcript_id=CHM13_chrY_T0001429;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001429;transcript_name=CHM13_chrY_T0001429;gene_name=ENSG00000310304;ID=intron:CHM13_chrY_T0001429:0;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19088131	19088764	.	+	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848903.1,ENST00000848903.1;transcript_id=CHM13_chrY_T0001429;gene_id=CHM13_chrY_G0000486;Parent=CHM13_chrY_T0001429;transcript_name=CHM13_chrY_T0001429;gene_name=ENSG00000310304;ID=exon:CHM13_chrY_T0001429:1;Name=ENSG00000310304;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19085417	19085745	.	-	.	source_gene_common_name=ELOCP26;source_gene=ENSG00000236599.1;alternative_source_transcripts=ENST00000436067.1,ENST00000436067.1;gene_id=CHM13_chrY_G0000487;gene_biotype=processed_pseudogene;gene_name=ELOCP26;gene_sources=liftoff;ID=CHM13_chrY_G0000487;Name=ELOCP26
CHM13_chrY	CAT	transcript	19085417	19085745	1000	-	.	source_transcript=ENST00000436067.1;source_transcript_name=ELOCP26-201;source_gene=ENSG00000236599.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236599.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436067.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP26;alternative_source_transcripts=ENST00000436067.1,ENST00000436067.1;transcript_id=CHM13_chrY_T0001430;gene_id=CHM13_chrY_G0000487;Parent=CHM13_chrY_G0000487;transcript_name=CHM13_chrY_T0001430;gene_name=ELOCP26;ID=CHM13_chrY_T0001430;Name=ELOCP26
CHM13_chrY	CAT	exon	19085417	19085745	.	-	.	source_transcript=ENST00000436067.1;source_transcript_name=ELOCP26-201;source_gene=ENSG00000236599.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236599.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436067.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP26;alternative_source_transcripts=ENST00000436067.1,ENST00000436067.1;transcript_id=CHM13_chrY_T0001430;gene_id=CHM13_chrY_G0000487;Parent=CHM13_chrY_T0001430;transcript_name=CHM13_chrY_T0001430;gene_name=ELOCP26;ID=exon:CHM13_chrY_T0001430:0;Name=ELOCP26;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19089320	19090899	.	-	.	source_gene_common_name=CDY9P;source_gene=ENSG00000232899.1;alternative_source_transcripts=ENST00000451397.1,ENST00000451397.1;gene_id=CHM13_chrY_G0000488;gene_biotype=unprocessed_pseudogene;gene_name=CDY9P;gene_sources=liftoff;ID=CHM13_chrY_G0000488;Name=CDY9P
CHM13_chrY	CAT	transcript	19089320	19090899	1000	-	.	source_transcript=ENST00000451397.1;source_transcript_name=CDY9P-201;source_gene=ENSG00000232899.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232899.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451397.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY9P;alternative_source_transcripts=ENST00000451397.1,ENST00000451397.1;transcript_id=CHM13_chrY_T0001431;gene_id=CHM13_chrY_G0000488;Parent=CHM13_chrY_G0000488;transcript_name=CHM13_chrY_T0001431;gene_name=CDY9P;ID=CHM13_chrY_T0001431;Name=CDY9P
CHM13_chrY	CAT	exon	19089320	19090899	.	-	.	source_transcript=ENST00000451397.1;source_transcript_name=CDY9P-201;source_gene=ENSG00000232899.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232899.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451397.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY9P;alternative_source_transcripts=ENST00000451397.1,ENST00000451397.1;transcript_id=CHM13_chrY_T0001431;gene_id=CHM13_chrY_G0000488;Parent=CHM13_chrY_T0001431;transcript_name=CHM13_chrY_T0001431;gene_name=CDY9P;ID=exon:CHM13_chrY_T0001431:0;Name=CDY9P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19183090	19183978	.	-	.	source_gene_common_name=TAF9P2;source_gene=ENSG00000229302.1;alternative_source_transcripts=ENST00000454958.1,ENST00000454958.1;gene_id=CHM13_chrY_G0000489;gene_biotype=processed_pseudogene;gene_name=TAF9P2;gene_sources=liftoff;ID=CHM13_chrY_G0000489;Name=TAF9P2
CHM13_chrY	CAT	transcript	19183090	19183978	1000	-	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000454958.1,ENST00000454958.1;transcript_id=CHM13_chrY_T0001432;gene_id=CHM13_chrY_G0000489;Parent=CHM13_chrY_G0000489;transcript_name=CHM13_chrY_T0001432;gene_name=TAF9P2;ID=CHM13_chrY_T0001432;Name=TAF9P2
CHM13_chrY	CAT	exon	19183090	19183131	.	-	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000454958.1,ENST00000454958.1;transcript_id=CHM13_chrY_T0001432;gene_id=CHM13_chrY_G0000489;Parent=CHM13_chrY_T0001432;transcript_name=CHM13_chrY_T0001432;gene_name=TAF9P2;ID=exon:CHM13_chrY_T0001432:0;Name=TAF9P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19183132	19183505	.	-	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000454958.1,ENST00000454958.1;transcript_id=CHM13_chrY_T0001432;gene_id=CHM13_chrY_G0000489;Parent=CHM13_chrY_T0001432;transcript_name=CHM13_chrY_T0001432;gene_name=TAF9P2;ID=intron:CHM13_chrY_T0001432:0;Name=TAF9P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19183506	19183978	.	-	.	source_transcript=ENST00000454958.1;source_transcript_name=TAF9P2-201;source_gene=ENSG00000229302.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229302.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P2;alternative_source_transcripts=ENST00000454958.1,ENST00000454958.1;transcript_id=CHM13_chrY_T0001432;gene_id=CHM13_chrY_G0000489;Parent=CHM13_chrY_T0001432;transcript_name=CHM13_chrY_T0001432;gene_name=TAF9P2;ID=exon:CHM13_chrY_T0001432:1;Name=TAF9P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19186664	19191247	.	+	.	source_gene_common_name=CLUHP2;source_gene=ENSG00000228945.3;alternative_source_transcripts=ENST00000426660.1;gene_id=CHM13_chrY_G0000490;gene_biotype=unprocessed_pseudogene;gene_name=CLUHP2;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000490;Name=CLUHP2
CHM13_chrY	CAT	transcript	19186664	19191247	1000	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_G0000490;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=CHM13_chrY_T0001433;Name=CLUHP2
CHM13_chrY	CAT	exon	19186664	19186835	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001433;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001433:0;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19186836	19187731	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001433;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001433:0;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19187732	19188394	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001433;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001433:1;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19188395	19188523	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001433;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001433:1;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19188524	19188631	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001433;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001433:2;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19188632	19189275	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001433;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001433:2;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19189276	19189347	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001433;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001433:3;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19189348	19189597	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001433;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001433:3;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19189598	19189651	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001433;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001433:4;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19189652	19190377	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001433;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001433:4;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19190378	19190476	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001433;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001433:5;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19190477	19190956	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001433;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001433:5;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19190957	19191247	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;alternative_source_transcripts=ENST00000426660.1;transcript_id=CHM13_chrY_T0001433;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001433;transcript_name=CHM13_chrY_T0001433;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001433:6;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19186664	19191247	1000	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_G0000490;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=CHM13_chrY_T0001434;Name=CLUHP2
CHM13_chrY	CAT	exon	19186664	19186835	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001434:0;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19186836	19187731	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001434:0;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19187732	19188171	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001434:1;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19188172	19188248	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001434:1;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19188249	19188394	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001434:2;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19188395	19188523	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001434:2;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19188524	19188631	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001434:3;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19188632	19189275	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001434:3;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19189276	19189347	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001434:4;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19189348	19189597	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001434:4;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19189598	19189651	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001434:5;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19189652	19190377	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001434:5;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19190378	19190476	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001434:6;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19190477	19190956	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001434:6;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19190957	19191040	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001434:7;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19191041	19191119	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=intron:CHM13_chrY_T0001434:7;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19191120	19191247	.	+	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=299.923;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=CHM13_chrY_T0001434;gene_id=CHM13_chrY_G0000490;Parent=CHM13_chrY_T0001434;transcript_name=CHM13_chrY_T0001434;gene_name=CLUHP2;ID=exon:CHM13_chrY_T0001434:8;Name=CLUHP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19232535	19259204	.	+	.	source_gene_common_name=FAM224A;source_gene=ENSG00000233522.2;alternative_source_transcripts=ENST00000776205.1,ENST00000776205.1;gene_id=CHM13_chrY_G0000491;gene_biotype=lncRNA;gene_name=FAM224A;gene_sources=liftoff;ID=CHM13_chrY_G0000491;Name=FAM224A
CHM13_chrY	CAT	transcript	19232535	19237369	1000	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1,ENST00000776205.1;transcript_id=CHM13_chrY_T0001435;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001435;gene_name=FAM224A;ID=CHM13_chrY_T0001435;Name=FAM224A
CHM13_chrY	CAT	exon	19232535	19232829	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1,ENST00000776205.1;transcript_id=CHM13_chrY_T0001435;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001435;transcript_name=CHM13_chrY_T0001435;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001435:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19233019	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1,ENST00000776205.1;transcript_id=CHM13_chrY_T0001435;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001435;transcript_name=CHM13_chrY_T0001435;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001435:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19233020	19233179	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1,ENST00000776205.1;transcript_id=CHM13_chrY_T0001435;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001435;transcript_name=CHM13_chrY_T0001435;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001435:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235674	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1,ENST00000776205.1;transcript_id=CHM13_chrY_T0001435;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001435;transcript_name=CHM13_chrY_T0001435;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001435:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1,ENST00000776205.1;transcript_id=CHM13_chrY_T0001435;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001435;transcript_name=CHM13_chrY_T0001435;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001435:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19237127	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1,ENST00000776205.1;transcript_id=CHM13_chrY_T0001435;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001435;transcript_name=CHM13_chrY_T0001435;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001435:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237369	.	+	.	source_transcript=ENST00000776205.1;source_transcript_name=FAM224A-211;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776205.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776205.1,ENST00000776205.1;transcript_id=CHM13_chrY_T0001435;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001435;transcript_name=CHM13_chrY_T0001435;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001435:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232618	19237339	1000	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1,ENST00000776207.1;transcript_id=CHM13_chrY_T0001436;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001436;gene_name=FAM224A;ID=CHM13_chrY_T0001436;Name=FAM224A
CHM13_chrY	CAT	exon	19232618	19232829	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1,ENST00000776207.1;transcript_id=CHM13_chrY_T0001436;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001436;transcript_name=CHM13_chrY_T0001436;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001436:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19232945	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1,ENST00000776207.1;transcript_id=CHM13_chrY_T0001436;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001436;transcript_name=CHM13_chrY_T0001436;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001436:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19232946	19233179	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1,ENST00000776207.1;transcript_id=CHM13_chrY_T0001436;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001436;transcript_name=CHM13_chrY_T0001436;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001436:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235674	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1,ENST00000776207.1;transcript_id=CHM13_chrY_T0001436;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001436;transcript_name=CHM13_chrY_T0001436;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001436:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1,ENST00000776207.1;transcript_id=CHM13_chrY_T0001436;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001436;transcript_name=CHM13_chrY_T0001436;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001436:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19237127	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1,ENST00000776207.1;transcript_id=CHM13_chrY_T0001436;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001436;transcript_name=CHM13_chrY_T0001436;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001436:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237339	.	+	.	source_transcript=ENST00000776207.1;source_transcript_name=FAM224A-213;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776207.1,ENST00000776207.1;transcript_id=CHM13_chrY_T0001436;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001436;transcript_name=CHM13_chrY_T0001436;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001436:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232630	19259215	1000	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1,ENST00000776196.1;transcript_id=CHM13_chrY_T0001437;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001437;gene_name=FAM224A;ID=CHM13_chrY_T0001437;Name=FAM224A
CHM13_chrY	CAT	exon	19232630	19233179	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1,ENST00000776196.1;transcript_id=CHM13_chrY_T0001437;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001437;transcript_name=CHM13_chrY_T0001437;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001437:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235674	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1,ENST00000776196.1;transcript_id=CHM13_chrY_T0001437;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001437;transcript_name=CHM13_chrY_T0001437;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001437:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1,ENST00000776196.1;transcript_id=CHM13_chrY_T0001437;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001437;transcript_name=CHM13_chrY_T0001437;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001437:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19258371	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1,ENST00000776196.1;transcript_id=CHM13_chrY_T0001437;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001437;transcript_name=CHM13_chrY_T0001437;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001437:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258372	19258456	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1,ENST00000776196.1;transcript_id=CHM13_chrY_T0001437;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001437;transcript_name=CHM13_chrY_T0001437;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001437:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19258457	19258543	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1,ENST00000776196.1;transcript_id=CHM13_chrY_T0001437;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001437;transcript_name=CHM13_chrY_T0001437;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001437:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258544	19259215	.	+	.	source_transcript=ENST00000776196.1;source_transcript_name=FAM224A-202;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776196.1,ENST00000776196.1;transcript_id=CHM13_chrY_T0001437;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001437;transcript_name=CHM13_chrY_T0001437;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001437:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232630	19237368	1000	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1,ENST00000776206.1;transcript_id=CHM13_chrY_T0001438;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001438;gene_name=FAM224A;ID=CHM13_chrY_T0001438;Name=FAM224A
CHM13_chrY	CAT	exon	19232630	19233179	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1,ENST00000776206.1;transcript_id=CHM13_chrY_T0001438;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001438;transcript_name=CHM13_chrY_T0001438;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001438:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235674	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1,ENST00000776206.1;transcript_id=CHM13_chrY_T0001438;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001438;transcript_name=CHM13_chrY_T0001438;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001438:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1,ENST00000776206.1;transcript_id=CHM13_chrY_T0001438;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001438;transcript_name=CHM13_chrY_T0001438;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001438:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19237127	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1,ENST00000776206.1;transcript_id=CHM13_chrY_T0001438;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001438;transcript_name=CHM13_chrY_T0001438;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001438:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237368	.	+	.	source_transcript=ENST00000776206.1;source_transcript_name=FAM224A-212;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776206.1,ENST00000776206.1;transcript_id=CHM13_chrY_T0001438;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001438;transcript_name=CHM13_chrY_T0001438;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001438:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232637	19237352	1000	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1,ENST00000776208.1;transcript_id=CHM13_chrY_T0001439;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001439;gene_name=FAM224A;ID=CHM13_chrY_T0001439;Name=FAM224A
CHM13_chrY	CAT	exon	19232637	19232829	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1,ENST00000776208.1;transcript_id=CHM13_chrY_T0001439;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001439;transcript_name=CHM13_chrY_T0001439;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001439:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19233019	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1,ENST00000776208.1;transcript_id=CHM13_chrY_T0001439;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001439;transcript_name=CHM13_chrY_T0001439;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001439:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19233020	19233179	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1,ENST00000776208.1;transcript_id=CHM13_chrY_T0001439;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001439;transcript_name=CHM13_chrY_T0001439;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001439:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235702	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1,ENST00000776208.1;transcript_id=CHM13_chrY_T0001439;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001439;transcript_name=CHM13_chrY_T0001439;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001439:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235703	19235792	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1,ENST00000776208.1;transcript_id=CHM13_chrY_T0001439;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001439;transcript_name=CHM13_chrY_T0001439;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001439:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19237127	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1,ENST00000776208.1;transcript_id=CHM13_chrY_T0001439;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001439;transcript_name=CHM13_chrY_T0001439;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001439:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237352	.	+	.	source_transcript=ENST00000776208.1;source_transcript_name=FAM224A-214;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776208.1,ENST00000776208.1;transcript_id=CHM13_chrY_T0001439;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001439;transcript_name=CHM13_chrY_T0001439;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001439:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232639	19237313	1000	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1,ENST00000776212.1;transcript_id=CHM13_chrY_T0001440;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001440;gene_name=FAM224A;ID=CHM13_chrY_T0001440;Name=FAM224A
CHM13_chrY	CAT	exon	19232639	19232829	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1,ENST00000776212.1;transcript_id=CHM13_chrY_T0001440;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001440;transcript_name=CHM13_chrY_T0001440;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001440:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19233019	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1,ENST00000776212.1;transcript_id=CHM13_chrY_T0001440;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001440;transcript_name=CHM13_chrY_T0001440;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001440:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19233020	19233179	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1,ENST00000776212.1;transcript_id=CHM13_chrY_T0001440;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001440;transcript_name=CHM13_chrY_T0001440;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001440:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19234722	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1,ENST00000776212.1;transcript_id=CHM13_chrY_T0001440;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001440;transcript_name=CHM13_chrY_T0001440;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001440:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19234723	19235792	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1,ENST00000776212.1;transcript_id=CHM13_chrY_T0001440;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001440;transcript_name=CHM13_chrY_T0001440;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001440:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19237127	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1,ENST00000776212.1;transcript_id=CHM13_chrY_T0001440;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001440;transcript_name=CHM13_chrY_T0001440;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001440:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237313	.	+	.	source_transcript=ENST00000776212.1;source_transcript_name=FAM224A-218;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776212.1;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776212.1,ENST00000776212.1;transcript_id=CHM13_chrY_T0001440;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001440;transcript_name=CHM13_chrY_T0001440;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001440:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232641	19259204	1000	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1,ENST00000776197.1;transcript_id=CHM13_chrY_T0001441;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001441;gene_name=FAM224A;ID=CHM13_chrY_T0001441;Name=FAM224A
CHM13_chrY	CAT	exon	19232641	19232829	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1,ENST00000776197.1;transcript_id=CHM13_chrY_T0001441;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001441;transcript_name=CHM13_chrY_T0001441;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001441:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19233019	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1,ENST00000776197.1;transcript_id=CHM13_chrY_T0001441;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001441;transcript_name=CHM13_chrY_T0001441;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001441:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19233020	19233179	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1,ENST00000776197.1;transcript_id=CHM13_chrY_T0001441;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001441;transcript_name=CHM13_chrY_T0001441;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001441:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235674	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1,ENST00000776197.1;transcript_id=CHM13_chrY_T0001441;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001441;transcript_name=CHM13_chrY_T0001441;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001441:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1,ENST00000776197.1;transcript_id=CHM13_chrY_T0001441;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001441;transcript_name=CHM13_chrY_T0001441;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001441:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19258371	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1,ENST00000776197.1;transcript_id=CHM13_chrY_T0001441;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001441;transcript_name=CHM13_chrY_T0001441;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001441:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258372	19258456	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1,ENST00000776197.1;transcript_id=CHM13_chrY_T0001441;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001441;transcript_name=CHM13_chrY_T0001441;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001441:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19258457	19258543	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1,ENST00000776197.1;transcript_id=CHM13_chrY_T0001441;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001441;transcript_name=CHM13_chrY_T0001441;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001441:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258544	19258670	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1,ENST00000776197.1;transcript_id=CHM13_chrY_T0001441;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001441;transcript_name=CHM13_chrY_T0001441;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001441:4;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19258671	19259144	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1,ENST00000776197.1;transcript_id=CHM13_chrY_T0001441;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001441;transcript_name=CHM13_chrY_T0001441;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001441:4;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19259145	19259204	.	+	.	source_transcript=ENST00000776197.1;source_transcript_name=FAM224A-203;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776197.1,ENST00000776197.1;transcript_id=CHM13_chrY_T0001441;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001441;transcript_name=CHM13_chrY_T0001441;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001441:5;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232641	19258930	1000	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1,ENST00000776203.1;transcript_id=CHM13_chrY_T0001442;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001442;gene_name=FAM224A;ID=CHM13_chrY_T0001442;Name=FAM224A
CHM13_chrY	CAT	exon	19232641	19232829	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1,ENST00000776203.1;transcript_id=CHM13_chrY_T0001442;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001442;transcript_name=CHM13_chrY_T0001442;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001442:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19258371	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1,ENST00000776203.1;transcript_id=CHM13_chrY_T0001442;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001442;transcript_name=CHM13_chrY_T0001442;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001442:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258372	19258456	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1,ENST00000776203.1;transcript_id=CHM13_chrY_T0001442;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001442;transcript_name=CHM13_chrY_T0001442;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001442:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19258457	19258543	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1,ENST00000776203.1;transcript_id=CHM13_chrY_T0001442;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001442;transcript_name=CHM13_chrY_T0001442;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001442:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258544	19258930	.	+	.	source_transcript=ENST00000776203.1;source_transcript_name=FAM224A-209;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776203.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776203.1,ENST00000776203.1;transcript_id=CHM13_chrY_T0001442;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001442;transcript_name=CHM13_chrY_T0001442;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001442:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232641	19237338	1000	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1,ENST00000776209.1;transcript_id=CHM13_chrY_T0001443;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001443;gene_name=FAM224A;ID=CHM13_chrY_T0001443;Name=FAM224A
CHM13_chrY	CAT	exon	19232641	19232829	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1,ENST00000776209.1;transcript_id=CHM13_chrY_T0001443;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001443;transcript_name=CHM13_chrY_T0001443;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001443:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19233043	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1,ENST00000776209.1;transcript_id=CHM13_chrY_T0001443;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001443;transcript_name=CHM13_chrY_T0001443;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001443:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19233044	19233179	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1,ENST00000776209.1;transcript_id=CHM13_chrY_T0001443;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001443;transcript_name=CHM13_chrY_T0001443;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001443:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235674	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1,ENST00000776209.1;transcript_id=CHM13_chrY_T0001443;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001443;transcript_name=CHM13_chrY_T0001443;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001443:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1,ENST00000776209.1;transcript_id=CHM13_chrY_T0001443;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001443;transcript_name=CHM13_chrY_T0001443;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001443:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19237127	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1,ENST00000776209.1;transcript_id=CHM13_chrY_T0001443;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001443;transcript_name=CHM13_chrY_T0001443;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001443:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237338	.	+	.	source_transcript=ENST00000776209.1;source_transcript_name=FAM224A-215;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776209.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776209.1,ENST00000776209.1;transcript_id=CHM13_chrY_T0001443;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001443;transcript_name=CHM13_chrY_T0001443;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001443:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232645	19259202	1000	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1,ENST00000776198.1;transcript_id=CHM13_chrY_T0001444;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001444;gene_name=FAM224A;ID=CHM13_chrY_T0001444;Name=FAM224A
CHM13_chrY	CAT	exon	19232645	19232829	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1,ENST00000776198.1;transcript_id=CHM13_chrY_T0001444;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001444;transcript_name=CHM13_chrY_T0001444;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001444:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19233019	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1,ENST00000776198.1;transcript_id=CHM13_chrY_T0001444;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001444;transcript_name=CHM13_chrY_T0001444;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001444:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19233020	19233179	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1,ENST00000776198.1;transcript_id=CHM13_chrY_T0001444;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001444;transcript_name=CHM13_chrY_T0001444;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001444:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235674	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1,ENST00000776198.1;transcript_id=CHM13_chrY_T0001444;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001444;transcript_name=CHM13_chrY_T0001444;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001444:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1,ENST00000776198.1;transcript_id=CHM13_chrY_T0001444;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001444;transcript_name=CHM13_chrY_T0001444;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001444:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19258371	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1,ENST00000776198.1;transcript_id=CHM13_chrY_T0001444;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001444;transcript_name=CHM13_chrY_T0001444;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001444:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258372	19258456	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1,ENST00000776198.1;transcript_id=CHM13_chrY_T0001444;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001444;transcript_name=CHM13_chrY_T0001444;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001444:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19258457	19258543	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1,ENST00000776198.1;transcript_id=CHM13_chrY_T0001444;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001444;transcript_name=CHM13_chrY_T0001444;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001444:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258544	19259202	.	+	.	source_transcript=ENST00000776198.1;source_transcript_name=FAM224A-204;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776198.1,ENST00000776198.1;transcript_id=CHM13_chrY_T0001444;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001444;transcript_name=CHM13_chrY_T0001444;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001444:4;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232645	19259200	1000	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1,ENST00000776199.1;transcript_id=CHM13_chrY_T0001445;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001445;gene_name=FAM224A;ID=CHM13_chrY_T0001445;Name=FAM224A
CHM13_chrY	CAT	exon	19232645	19232829	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1,ENST00000776199.1;transcript_id=CHM13_chrY_T0001445;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001445;transcript_name=CHM13_chrY_T0001445;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001445:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19233019	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1,ENST00000776199.1;transcript_id=CHM13_chrY_T0001445;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001445;transcript_name=CHM13_chrY_T0001445;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001445:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19233020	19233179	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1,ENST00000776199.1;transcript_id=CHM13_chrY_T0001445;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001445;transcript_name=CHM13_chrY_T0001445;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001445:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235702	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1,ENST00000776199.1;transcript_id=CHM13_chrY_T0001445;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001445;transcript_name=CHM13_chrY_T0001445;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001445:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235703	19235792	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1,ENST00000776199.1;transcript_id=CHM13_chrY_T0001445;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001445;transcript_name=CHM13_chrY_T0001445;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001445:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19258371	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1,ENST00000776199.1;transcript_id=CHM13_chrY_T0001445;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001445;transcript_name=CHM13_chrY_T0001445;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001445:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258372	19258456	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1,ENST00000776199.1;transcript_id=CHM13_chrY_T0001445;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001445;transcript_name=CHM13_chrY_T0001445;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001445:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19258457	19258543	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1,ENST00000776199.1;transcript_id=CHM13_chrY_T0001445;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001445;transcript_name=CHM13_chrY_T0001445;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001445:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258544	19258704	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1,ENST00000776199.1;transcript_id=CHM13_chrY_T0001445;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001445;transcript_name=CHM13_chrY_T0001445;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001445:4;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19258705	19259144	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1,ENST00000776199.1;transcript_id=CHM13_chrY_T0001445;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001445;transcript_name=CHM13_chrY_T0001445;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001445:4;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19259145	19259200	.	+	.	source_transcript=ENST00000776199.1;source_transcript_name=FAM224A-205;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776199.1,ENST00000776199.1;transcript_id=CHM13_chrY_T0001445;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001445;transcript_name=CHM13_chrY_T0001445;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001445:5;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232650	19259202	1000	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1,ENST00000776200.1;transcript_id=CHM13_chrY_T0001446;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001446;gene_name=FAM224A;ID=CHM13_chrY_T0001446;Name=FAM224A
CHM13_chrY	CAT	exon	19232650	19232829	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1,ENST00000776200.1;transcript_id=CHM13_chrY_T0001446;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001446;transcript_name=CHM13_chrY_T0001446;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001446:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19233019	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1,ENST00000776200.1;transcript_id=CHM13_chrY_T0001446;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001446;transcript_name=CHM13_chrY_T0001446;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001446:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19233020	19233179	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1,ENST00000776200.1;transcript_id=CHM13_chrY_T0001446;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001446;transcript_name=CHM13_chrY_T0001446;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001446:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235674	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1,ENST00000776200.1;transcript_id=CHM13_chrY_T0001446;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001446;transcript_name=CHM13_chrY_T0001446;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001446:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1,ENST00000776200.1;transcript_id=CHM13_chrY_T0001446;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001446;transcript_name=CHM13_chrY_T0001446;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001446:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19237127	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1,ENST00000776200.1;transcript_id=CHM13_chrY_T0001446;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001446;transcript_name=CHM13_chrY_T0001446;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001446:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237257	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1,ENST00000776200.1;transcript_id=CHM13_chrY_T0001446;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001446;transcript_name=CHM13_chrY_T0001446;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001446:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19237258	19258371	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1,ENST00000776200.1;transcript_id=CHM13_chrY_T0001446;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001446;transcript_name=CHM13_chrY_T0001446;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001446:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258372	19258456	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1,ENST00000776200.1;transcript_id=CHM13_chrY_T0001446;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001446;transcript_name=CHM13_chrY_T0001446;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001446:4;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19258457	19258543	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1,ENST00000776200.1;transcript_id=CHM13_chrY_T0001446;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001446;transcript_name=CHM13_chrY_T0001446;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001446:4;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258544	19259202	.	+	.	source_transcript=ENST00000776200.1;source_transcript_name=FAM224A-206;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776200.1,ENST00000776200.1;transcript_id=CHM13_chrY_T0001446;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001446;transcript_name=CHM13_chrY_T0001446;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001446:5;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232684	19259200	1000	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1,ENST00000776201.1;transcript_id=CHM13_chrY_T0001447;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001447;gene_name=FAM224A;ID=CHM13_chrY_T0001447;Name=FAM224A
CHM13_chrY	CAT	exon	19232684	19232829	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1,ENST00000776201.1;transcript_id=CHM13_chrY_T0001447;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001447;transcript_name=CHM13_chrY_T0001447;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001447:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19232945	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1,ENST00000776201.1;transcript_id=CHM13_chrY_T0001447;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001447;transcript_name=CHM13_chrY_T0001447;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001447:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19232946	19233179	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1,ENST00000776201.1;transcript_id=CHM13_chrY_T0001447;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001447;transcript_name=CHM13_chrY_T0001447;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001447:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235674	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1,ENST00000776201.1;transcript_id=CHM13_chrY_T0001447;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001447;transcript_name=CHM13_chrY_T0001447;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001447:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1,ENST00000776201.1;transcript_id=CHM13_chrY_T0001447;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001447;transcript_name=CHM13_chrY_T0001447;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001447:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19258371	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1,ENST00000776201.1;transcript_id=CHM13_chrY_T0001447;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001447;transcript_name=CHM13_chrY_T0001447;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001447:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258372	19258456	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1,ENST00000776201.1;transcript_id=CHM13_chrY_T0001447;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001447;transcript_name=CHM13_chrY_T0001447;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001447:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19258457	19258543	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1,ENST00000776201.1;transcript_id=CHM13_chrY_T0001447;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001447;transcript_name=CHM13_chrY_T0001447;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001447:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258544	19259200	.	+	.	source_transcript=ENST00000776201.1;source_transcript_name=FAM224A-207;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776201.1,ENST00000776201.1;transcript_id=CHM13_chrY_T0001447;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001447;transcript_name=CHM13_chrY_T0001447;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001447:4;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232684	19237338	1000	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1,ENST00000776210.1;transcript_id=CHM13_chrY_T0001448;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001448;gene_name=FAM224A;ID=CHM13_chrY_T0001448;Name=FAM224A
CHM13_chrY	CAT	exon	19232684	19232829	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1,ENST00000776210.1;transcript_id=CHM13_chrY_T0001448;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001448;transcript_name=CHM13_chrY_T0001448;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001448:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19235674	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1,ENST00000776210.1;transcript_id=CHM13_chrY_T0001448;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001448;transcript_name=CHM13_chrY_T0001448;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001448:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1,ENST00000776210.1;transcript_id=CHM13_chrY_T0001448;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001448;transcript_name=CHM13_chrY_T0001448;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001448:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19237127	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1,ENST00000776210.1;transcript_id=CHM13_chrY_T0001448;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001448;transcript_name=CHM13_chrY_T0001448;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001448:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237338	.	+	.	source_transcript=ENST00000776210.1;source_transcript_name=FAM224A-216;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776210.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776210.1,ENST00000776210.1;transcript_id=CHM13_chrY_T0001448;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001448;transcript_name=CHM13_chrY_T0001448;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001448:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232684	19237052	1000	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1,ENST00000776216.1;transcript_id=CHM13_chrY_T0001449;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001449;gene_name=FAM224A;ID=CHM13_chrY_T0001449;Name=FAM224A
CHM13_chrY	CAT	exon	19232684	19232829	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1,ENST00000776216.1;transcript_id=CHM13_chrY_T0001449;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001449;transcript_name=CHM13_chrY_T0001449;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001449:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19233019	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1,ENST00000776216.1;transcript_id=CHM13_chrY_T0001449;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001449;transcript_name=CHM13_chrY_T0001449;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001449:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19233020	19233179	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1,ENST00000776216.1;transcript_id=CHM13_chrY_T0001449;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001449;transcript_name=CHM13_chrY_T0001449;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001449:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235831	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1,ENST00000776216.1;transcript_id=CHM13_chrY_T0001449;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001449;transcript_name=CHM13_chrY_T0001449;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001449:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235832	19237052	.	+	.	source_transcript=ENST00000776216.1;source_transcript_name=FAM224A-222;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776216.1,ENST00000776216.1;transcript_id=CHM13_chrY_T0001449;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001449;transcript_name=CHM13_chrY_T0001449;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001449:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232689	19237338	1000	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1,ENST00000776211.1;transcript_id=CHM13_chrY_T0001450;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001450;gene_name=FAM224A;ID=CHM13_chrY_T0001450;Name=FAM224A
CHM13_chrY	CAT	exon	19232689	19232829	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1,ENST00000776211.1;transcript_id=CHM13_chrY_T0001450;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001450;transcript_name=CHM13_chrY_T0001450;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001450:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19233057	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1,ENST00000776211.1;transcript_id=CHM13_chrY_T0001450;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001450;transcript_name=CHM13_chrY_T0001450;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001450:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19233058	19233179	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1,ENST00000776211.1;transcript_id=CHM13_chrY_T0001450;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001450;transcript_name=CHM13_chrY_T0001450;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001450:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235674	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1,ENST00000776211.1;transcript_id=CHM13_chrY_T0001450;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001450;transcript_name=CHM13_chrY_T0001450;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001450:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1,ENST00000776211.1;transcript_id=CHM13_chrY_T0001450;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001450;transcript_name=CHM13_chrY_T0001450;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001450:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19237127	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1,ENST00000776211.1;transcript_id=CHM13_chrY_T0001450;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001450;transcript_name=CHM13_chrY_T0001450;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001450:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237338	.	+	.	source_transcript=ENST00000776211.1;source_transcript_name=FAM224A-217;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776211.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776211.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776211.1,ENST00000776211.1;transcript_id=CHM13_chrY_T0001450;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001450;transcript_name=CHM13_chrY_T0001450;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001450:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232690	19259200	1000	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=CHM13_chrY_T0001451;Name=FAM224A
CHM13_chrY	CAT	exon	19232690	19232829	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001451;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001451:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19233019	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001451;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001451:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19233020	19233179	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001451;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001451:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235674	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001451;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001451:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001451;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001451:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19237127	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001451;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001451:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237257	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001451;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001451:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19237258	19258371	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001451;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001451:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258372	19258456	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001451;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001451:4;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19258457	19258543	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001451;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001451:4;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258544	19258670	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001451;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001451:5;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19258671	19259144	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001451;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001451:5;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19259145	19259200	.	+	.	source_transcript=ENST00000776202.1;source_transcript_name=FAM224A-208;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776202.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776202.1,ENST00000776202.1;transcript_id=CHM13_chrY_T0001451;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001451;transcript_name=CHM13_chrY_T0001451;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001451:6;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232690	19237311	1000	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1,ENST00000776213.1;transcript_id=CHM13_chrY_T0001452;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001452;gene_name=FAM224A;ID=CHM13_chrY_T0001452;Name=FAM224A
CHM13_chrY	CAT	exon	19232690	19232829	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1,ENST00000776213.1;transcript_id=CHM13_chrY_T0001452;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001452;transcript_name=CHM13_chrY_T0001452;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001452:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19233019	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1,ENST00000776213.1;transcript_id=CHM13_chrY_T0001452;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001452;transcript_name=CHM13_chrY_T0001452;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001452:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19233020	19233179	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1,ENST00000776213.1;transcript_id=CHM13_chrY_T0001452;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001452;transcript_name=CHM13_chrY_T0001452;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001452:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19237127	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1,ENST00000776213.1;transcript_id=CHM13_chrY_T0001452;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001452;transcript_name=CHM13_chrY_T0001452;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001452:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237311	.	+	.	source_transcript=ENST00000776213.1;source_transcript_name=FAM224A-219;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776213.1,ENST00000776213.1;transcript_id=CHM13_chrY_T0001452;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001452;transcript_name=CHM13_chrY_T0001452;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001452:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232691	19258927	1000	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1,ENST00000776204.1;transcript_id=CHM13_chrY_T0001453;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001453;gene_name=FAM224A;ID=CHM13_chrY_T0001453;Name=FAM224A
CHM13_chrY	CAT	exon	19232691	19233179	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1,ENST00000776204.1;transcript_id=CHM13_chrY_T0001453;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001453;transcript_name=CHM13_chrY_T0001453;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001453:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235674	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1,ENST00000776204.1;transcript_id=CHM13_chrY_T0001453;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001453;transcript_name=CHM13_chrY_T0001453;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001453:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1,ENST00000776204.1;transcript_id=CHM13_chrY_T0001453;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001453;transcript_name=CHM13_chrY_T0001453;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001453:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19237127	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1,ENST00000776204.1;transcript_id=CHM13_chrY_T0001453;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001453;transcript_name=CHM13_chrY_T0001453;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001453:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237257	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1,ENST00000776204.1;transcript_id=CHM13_chrY_T0001453;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001453;transcript_name=CHM13_chrY_T0001453;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001453:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19237258	19258371	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1,ENST00000776204.1;transcript_id=CHM13_chrY_T0001453;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001453;transcript_name=CHM13_chrY_T0001453;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001453:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258372	19258456	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1,ENST00000776204.1;transcript_id=CHM13_chrY_T0001453;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001453;transcript_name=CHM13_chrY_T0001453;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001453:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19258457	19258543	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1,ENST00000776204.1;transcript_id=CHM13_chrY_T0001453;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001453;transcript_name=CHM13_chrY_T0001453;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001453:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258544	19258927	.	+	.	source_transcript=ENST00000776204.1;source_transcript_name=FAM224A-210;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776204.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776204.1,ENST00000776204.1;transcript_id=CHM13_chrY_T0001453;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001453;transcript_name=CHM13_chrY_T0001453;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001453:4;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232727	19237338	1000	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1,ENST00000776214.1;transcript_id=CHM13_chrY_T0001454;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001454;gene_name=FAM224A;ID=CHM13_chrY_T0001454;Name=FAM224A
CHM13_chrY	CAT	exon	19232727	19232829	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1,ENST00000776214.1;transcript_id=CHM13_chrY_T0001454;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001454;transcript_name=CHM13_chrY_T0001454;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001454:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19232830	19232945	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1,ENST00000776214.1;transcript_id=CHM13_chrY_T0001454;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001454;transcript_name=CHM13_chrY_T0001454;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001454:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19232946	19233179	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1,ENST00000776214.1;transcript_id=CHM13_chrY_T0001454;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001454;transcript_name=CHM13_chrY_T0001454;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001454:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235702	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1,ENST00000776214.1;transcript_id=CHM13_chrY_T0001454;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001454;transcript_name=CHM13_chrY_T0001454;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001454:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235703	19235792	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1,ENST00000776214.1;transcript_id=CHM13_chrY_T0001454;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001454;transcript_name=CHM13_chrY_T0001454;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001454:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19237127	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1,ENST00000776214.1;transcript_id=CHM13_chrY_T0001454;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001454;transcript_name=CHM13_chrY_T0001454;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001454:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237338	.	+	.	source_transcript=ENST00000776214.1;source_transcript_name=FAM224A-220;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776214.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776214.1,ENST00000776214.1;transcript_id=CHM13_chrY_T0001454;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001454;transcript_name=CHM13_chrY_T0001454;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001454:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232741	19259698	1000	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1,ENST00000419557.1;transcript_id=CHM13_chrY_T0001455;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001455;gene_name=FAM224A;ID=CHM13_chrY_T0001455;Name=FAM224A
CHM13_chrY	CAT	exon	19232741	19233179	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1,ENST00000419557.1;transcript_id=CHM13_chrY_T0001455;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001455;transcript_name=CHM13_chrY_T0001455;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001455:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235674	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1,ENST00000419557.1;transcript_id=CHM13_chrY_T0001455;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001455;transcript_name=CHM13_chrY_T0001455;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001455:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235675	19235792	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1,ENST00000419557.1;transcript_id=CHM13_chrY_T0001455;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001455;transcript_name=CHM13_chrY_T0001455;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001455:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19256487	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1,ENST00000419557.1;transcript_id=CHM13_chrY_T0001455;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001455;transcript_name=CHM13_chrY_T0001455;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001455:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19256488	19256722	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1,ENST00000419557.1;transcript_id=CHM13_chrY_T0001455;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001455;transcript_name=CHM13_chrY_T0001455;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001455:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19256723	19258371	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1,ENST00000419557.1;transcript_id=CHM13_chrY_T0001455;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001455;transcript_name=CHM13_chrY_T0001455;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001455:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258372	19258456	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1,ENST00000419557.1;transcript_id=CHM13_chrY_T0001455;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001455;transcript_name=CHM13_chrY_T0001455;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001455:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19258457	19258543	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1,ENST00000419557.1;transcript_id=CHM13_chrY_T0001455;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001455;transcript_name=CHM13_chrY_T0001455;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001455:3;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19258544	19259698	.	+	.	source_transcript=ENST00000419557.1;source_transcript_name=FAM224A-201;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419557.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419557.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000419557.1,ENST00000419557.1;transcript_id=CHM13_chrY_T0001455;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001455;transcript_name=CHM13_chrY_T0001455;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001455:4;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19232924	19237330	1000	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1,ENST00000776215.1;transcript_id=CHM13_chrY_T0001456;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_G0000491;transcript_name=CHM13_chrY_T0001456;gene_name=FAM224A;ID=CHM13_chrY_T0001456;Name=FAM224A
CHM13_chrY	CAT	exon	19232924	19233179	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1,ENST00000776215.1;transcript_id=CHM13_chrY_T0001456;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001456;transcript_name=CHM13_chrY_T0001456;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001456:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19233180	19235702	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1,ENST00000776215.1;transcript_id=CHM13_chrY_T0001456;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001456;transcript_name=CHM13_chrY_T0001456;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001456:0;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19235703	19235792	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1,ENST00000776215.1;transcript_id=CHM13_chrY_T0001456;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001456;transcript_name=CHM13_chrY_T0001456;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001456:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19235793	19237127	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1,ENST00000776215.1;transcript_id=CHM13_chrY_T0001456;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001456;transcript_name=CHM13_chrY_T0001456;gene_name=FAM224A;ID=intron:CHM13_chrY_T0001456:1;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19237128	19237330	.	+	.	source_transcript=ENST00000776215.1;source_transcript_name=FAM224A-221;source_gene=ENSG00000233522.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233522.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776215.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;alternative_source_transcripts=ENST00000776215.1,ENST00000776215.1;transcript_id=CHM13_chrY_T0001456;gene_id=CHM13_chrY_G0000491;Parent=CHM13_chrY_T0001456;transcript_name=CHM13_chrY_T0001456;gene_name=FAM224A;ID=exon:CHM13_chrY_T0001456:2;Name=FAM224A;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19243448	19243537	.	+	.	source_gene_common_name=ENSG00000278391;source_gene=ENSG00000278391.1;alternative_source_transcripts=ENST00000614353.1,ENST00000614353.1;gene_id=CHM13_chrY_G0000492;gene_biotype=misc_RNA;gene_name=ENSG00000278391;gene_sources=liftoff;ID=CHM13_chrY_G0000492;Name=ENSG00000278391
CHM13_chrY	CAT	transcript	19243448	19243537	1000	+	.	source_transcript=ENST00000614353.1;source_transcript_name=ENST00000614353;source_gene=ENSG00000278391.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278391.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000614353.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614353.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278391;alternative_source_transcripts=ENST00000614353.1,ENST00000614353.1;transcript_id=CHM13_chrY_T0001457;gene_id=CHM13_chrY_G0000492;Parent=CHM13_chrY_G0000492;transcript_name=CHM13_chrY_T0001457;gene_name=ENSG00000278391;ID=CHM13_chrY_T0001457;Name=ENSG00000278391
CHM13_chrY	CAT	exon	19243448	19243537	.	+	.	source_transcript=ENST00000614353.1;source_transcript_name=ENST00000614353;source_gene=ENSG00000278391.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278391.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000614353.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614353.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278391;alternative_source_transcripts=ENST00000614353.1,ENST00000614353.1;transcript_id=CHM13_chrY_T0001457;gene_id=CHM13_chrY_G0000492;Parent=CHM13_chrY_T0001457;transcript_name=CHM13_chrY_T0001457;gene_name=ENSG00000278391;ID=exon:CHM13_chrY_T0001457:0;Name=ENSG00000278391;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19252611	19252726	.	-	.	source_gene_common_name=RNA5SP521;source_gene=ENSG00000252012.1;alternative_source_transcripts=ENST00000516144.1,ENST00000516144.1;gene_id=CHM13_chrY_G0000493;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP521;gene_sources=liftoff;ID=CHM13_chrY_G0000493;Name=RNA5SP521
CHM13_chrY	CAT	transcript	19252611	19252726	1000	-	.	source_transcript=ENST00000516203.1;source_transcript_name=RNA5SP521-201;source_gene=ENSG00000252012.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252012.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516203.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP521;alternative_source_transcripts=ENST00000516144.1,ENST00000516144.1;transcript_id=CHM13_chrY_T0001458;gene_id=CHM13_chrY_G0000493;Parent=CHM13_chrY_G0000493;transcript_name=CHM13_chrY_T0001458;gene_name=RNA5SP521;ID=CHM13_chrY_T0001458;Name=RNA5SP521
CHM13_chrY	CAT	exon	19252611	19252726	.	-	.	source_transcript=ENST00000516203.1;source_transcript_name=RNA5SP521-201;source_gene=ENSG00000252012.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252012.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP521;alternative_source_transcripts=ENST00000516144.1,ENST00000516144.1;transcript_id=CHM13_chrY_T0001458;gene_id=CHM13_chrY_G0000493;Parent=CHM13_chrY_T0001458;transcript_name=CHM13_chrY_T0001458;gene_name=RNA5SP521;ID=exon:CHM13_chrY_T0001458:0;Name=RNA5SP521;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19254524	19254636	.	-	.	source_gene_common_name=RNA5SP520;source_gene=ENSG00000252315.1;alternative_source_transcripts=ENST00000516858.1,ENST00000516858.1;gene_id=CHM13_chrY_G0000494;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP520;gene_sources=liftoff;ID=CHM13_chrY_G0000494;Name=RNA5SP520
CHM13_chrY	CAT	transcript	19254524	19254636	1000	-	.	source_transcript=ENST00000516506.1;source_transcript_name=RNA5SP520-201;source_gene=ENSG00000252315.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252315.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516506.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516506.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP520;alternative_source_transcripts=ENST00000516858.1,ENST00000516858.1;transcript_id=CHM13_chrY_T0001459;gene_id=CHM13_chrY_G0000494;Parent=CHM13_chrY_G0000494;transcript_name=CHM13_chrY_T0001459;gene_name=RNA5SP520;ID=CHM13_chrY_T0001459;Name=RNA5SP520
CHM13_chrY	CAT	exon	19254524	19254636	.	-	.	source_transcript=ENST00000516506.1;source_transcript_name=RNA5SP520-201;source_gene=ENSG00000252315.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252315.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516506.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516506.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP520;alternative_source_transcripts=ENST00000516858.1,ENST00000516858.1;transcript_id=CHM13_chrY_T0001459;gene_id=CHM13_chrY_G0000494;Parent=CHM13_chrY_T0001459;transcript_name=CHM13_chrY_T0001459;gene_name=RNA5SP520;ID=exon:CHM13_chrY_T0001459:0;Name=RNA5SP520;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19293462	19295639	.	+	.	source_gene_common_name=TUBB1P1;source_gene=ENSG00000249726.1;alternative_source_transcripts=ENST00000503144.1;gene_id=CHM13_chrY_G0000495;gene_biotype=unprocessed_pseudogene;gene_name=TUBB1P1;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000495;Name=TUBB1P1
CHM13_chrY	CAT	transcript	19293462	19295639	1000	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;alternative_source_transcripts=ENST00000503144.1;transcript_id=CHM13_chrY_T0001460;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_G0000495;transcript_name=CHM13_chrY_T0001460;gene_name=TUBB1P1;ID=CHM13_chrY_T0001460;Name=TUBB1P1
CHM13_chrY	CAT	exon	19293462	19293518	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;alternative_source_transcripts=ENST00000503144.1;transcript_id=CHM13_chrY_T0001460;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_T0001460;transcript_name=CHM13_chrY_T0001460;gene_name=TUBB1P1;ID=exon:CHM13_chrY_T0001460:0;Name=TUBB1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19293519	19293823	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;alternative_source_transcripts=ENST00000503144.1;transcript_id=CHM13_chrY_T0001460;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_T0001460;transcript_name=CHM13_chrY_T0001460;gene_name=TUBB1P1;ID=intron:CHM13_chrY_T0001460:0;Name=TUBB1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19293824	19294122	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;alternative_source_transcripts=ENST00000503144.1;transcript_id=CHM13_chrY_T0001460;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_T0001460;transcript_name=CHM13_chrY_T0001460;gene_name=TUBB1P1;ID=exon:CHM13_chrY_T0001460:1;Name=TUBB1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19294123	19294615	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;alternative_source_transcripts=ENST00000503144.1;transcript_id=CHM13_chrY_T0001460;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_T0001460;transcript_name=CHM13_chrY_T0001460;gene_name=TUBB1P1;ID=intron:CHM13_chrY_T0001460:1;Name=TUBB1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19294616	19295639	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;alternative_source_transcripts=ENST00000503144.1;transcript_id=CHM13_chrY_T0001460;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_T0001460;transcript_name=CHM13_chrY_T0001460;gene_name=TUBB1P1;ID=exon:CHM13_chrY_T0001460:2;Name=TUBB1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19293462	19295639	1000	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=CHM13_chrY_T0001461;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_G0000495;transcript_name=CHM13_chrY_T0001461;gene_name=TUBB1P1;ID=CHM13_chrY_T0001461;Name=TUBB1P1
CHM13_chrY	CAT	exon	19293462	19293518	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=CHM13_chrY_T0001461;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_T0001461;transcript_name=CHM13_chrY_T0001461;gene_name=TUBB1P1;ID=exon:CHM13_chrY_T0001461:0;Name=TUBB1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19293519	19293823	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=CHM13_chrY_T0001461;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_T0001461;transcript_name=CHM13_chrY_T0001461;gene_name=TUBB1P1;ID=intron:CHM13_chrY_T0001461:0;Name=TUBB1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19293824	19293932	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=CHM13_chrY_T0001461;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_T0001461;transcript_name=CHM13_chrY_T0001461;gene_name=TUBB1P1;ID=exon:CHM13_chrY_T0001461:1;Name=TUBB1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19293933	19294012	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=CHM13_chrY_T0001461;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_T0001461;transcript_name=CHM13_chrY_T0001461;gene_name=TUBB1P1;ID=intron:CHM13_chrY_T0001461:1;Name=TUBB1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19294013	19294122	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=CHM13_chrY_T0001461;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_T0001461;transcript_name=CHM13_chrY_T0001461;gene_name=TUBB1P1;ID=exon:CHM13_chrY_T0001461:2;Name=TUBB1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19294123	19294615	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=CHM13_chrY_T0001461;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_T0001461;transcript_name=CHM13_chrY_T0001461;gene_name=TUBB1P1;ID=intron:CHM13_chrY_T0001461:2;Name=TUBB1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19294616	19295639	.	+	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=CHM13_chrY_T0001461;gene_id=CHM13_chrY_G0000495;Parent=CHM13_chrY_T0001461;transcript_name=CHM13_chrY_T0001461;gene_name=TUBB1P1;ID=exon:CHM13_chrY_T0001461:3;Name=TUBB1P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19295785	19297998	.	-	.	source_gene_common_name=ENSG00000283076;source_gene=ENSG00000283076.1;gene_id=CHM13_chrY_G0000496;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000283076;gene_sources=liftoff;ID=CHM13_chrY_G0000496;Name=ENSG00000283076
CHM13_chrY	CAT	transcript	19295785	19297998	1000	-	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=CHM13_chrY_T0001462;gene_id=CHM13_chrY_G0000496;Parent=CHM13_chrY_G0000496;transcript_name=CHM13_chrY_T0001462;gene_name=ENSG00000283076;ID=CHM13_chrY_T0001462;Name=ENSG00000283076
CHM13_chrY	CAT	exon	19295785	19295911	.	-	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=CHM13_chrY_T0001462;gene_id=CHM13_chrY_G0000496;Parent=CHM13_chrY_T0001462;transcript_name=CHM13_chrY_T0001462;gene_name=ENSG00000283076;ID=exon:CHM13_chrY_T0001462:0;Name=ENSG00000283076;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19295912	19296367	.	-	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=CHM13_chrY_T0001462;gene_id=CHM13_chrY_G0000496;Parent=CHM13_chrY_T0001462;transcript_name=CHM13_chrY_T0001462;gene_name=ENSG00000283076;ID=intron:CHM13_chrY_T0001462:0;Name=ENSG00000283076;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19296368	19296484	.	-	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=CHM13_chrY_T0001462;gene_id=CHM13_chrY_G0000496;Parent=CHM13_chrY_T0001462;transcript_name=CHM13_chrY_T0001462;gene_name=ENSG00000283076;ID=exon:CHM13_chrY_T0001462:1;Name=ENSG00000283076;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19296485	19296852	.	-	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=CHM13_chrY_T0001462;gene_id=CHM13_chrY_G0000496;Parent=CHM13_chrY_T0001462;transcript_name=CHM13_chrY_T0001462;gene_name=ENSG00000283076;ID=intron:CHM13_chrY_T0001462:1;Name=ENSG00000283076;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19296853	19296947	.	-	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=CHM13_chrY_T0001462;gene_id=CHM13_chrY_G0000496;Parent=CHM13_chrY_T0001462;transcript_name=CHM13_chrY_T0001462;gene_name=ENSG00000283076;ID=exon:CHM13_chrY_T0001462:2;Name=ENSG00000283076;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19296948	19297272	.	-	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=CHM13_chrY_T0001462;gene_id=CHM13_chrY_G0000496;Parent=CHM13_chrY_T0001462;transcript_name=CHM13_chrY_T0001462;gene_name=ENSG00000283076;ID=intron:CHM13_chrY_T0001462:2;Name=ENSG00000283076;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19297273	19297351	.	-	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=CHM13_chrY_T0001462;gene_id=CHM13_chrY_G0000496;Parent=CHM13_chrY_T0001462;transcript_name=CHM13_chrY_T0001462;gene_name=ENSG00000283076;ID=exon:CHM13_chrY_T0001462:3;Name=ENSG00000283076;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19297352	19297481	.	-	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=CHM13_chrY_T0001462;gene_id=CHM13_chrY_G0000496;Parent=CHM13_chrY_T0001462;transcript_name=CHM13_chrY_T0001462;gene_name=ENSG00000283076;ID=intron:CHM13_chrY_T0001462:3;Name=ENSG00000283076;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19297482	19297744	.	-	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=CHM13_chrY_T0001462;gene_id=CHM13_chrY_G0000496;Parent=CHM13_chrY_T0001462;transcript_name=CHM13_chrY_T0001462;gene_name=ENSG00000283076;ID=exon:CHM13_chrY_T0001462:4;Name=ENSG00000283076;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19297745	19297789	.	-	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=CHM13_chrY_T0001462;gene_id=CHM13_chrY_G0000496;Parent=CHM13_chrY_T0001462;transcript_name=CHM13_chrY_T0001462;gene_name=ENSG00000283076;ID=intron:CHM13_chrY_T0001462:4;Name=ENSG00000283076;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19297790	19297998	.	-	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=CHM13_chrY_T0001462;gene_id=CHM13_chrY_G0000496;Parent=CHM13_chrY_T0001462;transcript_name=CHM13_chrY_T0001462;gene_name=ENSG00000283076;ID=exon:CHM13_chrY_T0001462:5;Name=ENSG00000283076;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19297482	19311540	.	-	.	source_gene_common_name=FAM41AY1;source_gene=ENSG00000224989.2;gene_id=CHM13_chrY_G0000497;gene_biotype=lncRNA;gene_name=FAM41AY1;gene_sources=liftoff;ID=CHM13_chrY_G0000497;Name=FAM41AY1
CHM13_chrY	CAT	transcript	19297482	19311540	1000	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_G0000497;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=CHM13_chrY_T0001463;Name=FAM41AY1
CHM13_chrY	CAT	exon	19297482	19297691	.	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_T0001463;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=exon:CHM13_chrY_T0001463:0;Name=FAM41AY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19297692	19297965	.	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_T0001463;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=intron:CHM13_chrY_T0001463:0;Name=FAM41AY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19297966	19298059	.	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_T0001463;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=exon:CHM13_chrY_T0001463:1;Name=FAM41AY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19298060	19298168	.	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_T0001463;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=intron:CHM13_chrY_T0001463:1;Name=FAM41AY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19298169	19298339	.	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_T0001463;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=exon:CHM13_chrY_T0001463:2;Name=FAM41AY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19298340	19298932	.	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_T0001463;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=intron:CHM13_chrY_T0001463:2;Name=FAM41AY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19298933	19299026	.	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_T0001463;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=exon:CHM13_chrY_T0001463:3;Name=FAM41AY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19299027	19299273	.	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_T0001463;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=intron:CHM13_chrY_T0001463:3;Name=FAM41AY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19299274	19299402	.	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_T0001463;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=exon:CHM13_chrY_T0001463:4;Name=FAM41AY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19299403	19310737	.	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_T0001463;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=intron:CHM13_chrY_T0001463:4;Name=FAM41AY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19310738	19310787	.	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_T0001463;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=exon:CHM13_chrY_T0001463:5;Name=FAM41AY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19310788	19311382	.	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_T0001463;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=intron:CHM13_chrY_T0001463:5;Name=FAM41AY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19311383	19311540	.	-	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=CHM13_chrY_T0001463;gene_id=CHM13_chrY_G0000497;Parent=CHM13_chrY_T0001463;transcript_name=CHM13_chrY_T0001463;gene_name=FAM41AY1;ID=exon:CHM13_chrY_T0001463:6;Name=FAM41AY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19347284	19347612	.	+	.	source_gene_common_name=ELOCP13;source_gene=ENSG00000225716.1;alternative_source_transcripts=ENST00000443934.1,ENST00000443934.1;gene_id=CHM13_chrY_G0000498;gene_biotype=processed_pseudogene;gene_name=ELOCP13;gene_sources=liftoff;ID=CHM13_chrY_G0000498;Name=ELOCP13
CHM13_chrY	CAT	transcript	19347284	19347612	1000	+	.	source_transcript=ENST00000443934.1;source_transcript_name=ELOCP13-201;source_gene=ENSG00000225716.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225716.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443934.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP13;alternative_source_transcripts=ENST00000443934.1,ENST00000443934.1;transcript_id=CHM13_chrY_T0001464;gene_id=CHM13_chrY_G0000498;Parent=CHM13_chrY_G0000498;transcript_name=CHM13_chrY_T0001464;gene_name=ELOCP13;ID=CHM13_chrY_T0001464;Name=ELOCP13
CHM13_chrY	CAT	exon	19347284	19347612	.	+	.	source_transcript=ENST00000443934.1;source_transcript_name=ELOCP13-201;source_gene=ENSG00000225716.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225716.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443934.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP13;alternative_source_transcripts=ENST00000443934.1,ENST00000443934.1;transcript_id=CHM13_chrY_T0001464;gene_id=CHM13_chrY_G0000498;Parent=CHM13_chrY_T0001464;transcript_name=CHM13_chrY_T0001464;gene_name=ELOCP13;ID=exon:CHM13_chrY_T0001464:0;Name=ELOCP13;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19359639	19378623	.	-	.	source_gene_common_name=OFD1P4Y;source_gene=ENSG00000229406.1;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;gene_id=CHM13_chrY_G0000499;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P4Y;gene_sources=liftoff;ID=CHM13_chrY_G0000499;Name=OFD1P4Y
CHM13_chrY	CAT	transcript	19359639	19378623	1000	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_G0000499;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=CHM13_chrY_T0001465;Name=OFD1P4Y
CHM13_chrY	CAT	exon	19359639	19359752	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=exon:CHM13_chrY_T0001465:0;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19359753	19361381	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=intron:CHM13_chrY_T0001465:0;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19361382	19361472	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=exon:CHM13_chrY_T0001465:1;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19361473	19362577	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=intron:CHM13_chrY_T0001465:1;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19362578	19362647	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=exon:CHM13_chrY_T0001465:2;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19362648	19364433	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=intron:CHM13_chrY_T0001465:2;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19364434	19364552	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=exon:CHM13_chrY_T0001465:3;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19364553	19366720	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=intron:CHM13_chrY_T0001465:3;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19366721	19366826	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=exon:CHM13_chrY_T0001465:4;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19366827	19369936	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=intron:CHM13_chrY_T0001465:4;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19369937	19370104	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=exon:CHM13_chrY_T0001465:5;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19370105	19370400	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=intron:CHM13_chrY_T0001465:5;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19370401	19370537	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=exon:CHM13_chrY_T0001465:6;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19370538	19374751	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=intron:CHM13_chrY_T0001465:6;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19374752	19374782	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=exon:CHM13_chrY_T0001465:7;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19374783	19374869	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=intron:CHM13_chrY_T0001465:7;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19374870	19374937	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=exon:CHM13_chrY_T0001465:8;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19374938	19377155	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=intron:CHM13_chrY_T0001465:8;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19377156	19377356	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=exon:CHM13_chrY_T0001465:9;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19377357	19378549	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=intron:CHM13_chrY_T0001465:9;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19378550	19378623	.	-	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=CHM13_chrY_T0001465;gene_id=CHM13_chrY_G0000499;Parent=CHM13_chrY_T0001465;transcript_name=CHM13_chrY_T0001465;gene_name=OFD1P4Y;ID=exon:CHM13_chrY_T0001465:10;Name=OFD1P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19386733	19390722	.	+	.	source_gene_common_name=ENSG00000307031;source_gene=ENSG00000307031.1;gene_id=CHM13_chrY_G0000500;gene_biotype=lncRNA;gene_name=ENSG00000307031;gene_sources=liftoff;ID=CHM13_chrY_G0000500;Name=ENSG00000307031
CHM13_chrY	CAT	transcript	19386733	19390722	1000	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=CHM13_chrY_T0001466;gene_id=CHM13_chrY_G0000500;Parent=CHM13_chrY_G0000500;transcript_name=CHM13_chrY_T0001466;gene_name=ENSG00000307031;ID=CHM13_chrY_T0001466;Name=ENSG00000307031
CHM13_chrY	CAT	exon	19386733	19386954	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=CHM13_chrY_T0001466;gene_id=CHM13_chrY_G0000500;Parent=CHM13_chrY_T0001466;transcript_name=CHM13_chrY_T0001466;gene_name=ENSG00000307031;ID=exon:CHM13_chrY_T0001466:0;Name=ENSG00000307031;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19386955	19387572	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=CHM13_chrY_T0001466;gene_id=CHM13_chrY_G0000500;Parent=CHM13_chrY_T0001466;transcript_name=CHM13_chrY_T0001466;gene_name=ENSG00000307031;ID=intron:CHM13_chrY_T0001466:0;Name=ENSG00000307031;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19387573	19387704	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=CHM13_chrY_T0001466;gene_id=CHM13_chrY_G0000500;Parent=CHM13_chrY_T0001466;transcript_name=CHM13_chrY_T0001466;gene_name=ENSG00000307031;ID=exon:CHM13_chrY_T0001466:1;Name=ENSG00000307031;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19387705	19390480	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=CHM13_chrY_T0001466;gene_id=CHM13_chrY_G0000500;Parent=CHM13_chrY_T0001466;transcript_name=CHM13_chrY_T0001466;gene_name=ENSG00000307031;ID=intron:CHM13_chrY_T0001466:1;Name=ENSG00000307031;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19390481	19390722	.	+	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=CHM13_chrY_T0001466;gene_id=CHM13_chrY_G0000500;Parent=CHM13_chrY_T0001466;transcript_name=CHM13_chrY_T0001466;gene_name=ENSG00000307031;ID=exon:CHM13_chrY_T0001466:2;Name=ENSG00000307031;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19387573	19393895	.	+	.	source_gene_common_name=USP9YP14;source_gene=ENSG00000227494.2;gene_id=CHM13_chrY_G0000501;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=USP9YP14;gene_sources=liftoff;ID=CHM13_chrY_G0000501;Name=USP9YP14
CHM13_chrY	CAT	transcript	19387573	19393895	1000	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=CHM13_chrY_T0001467;gene_id=CHM13_chrY_G0000501;Parent=CHM13_chrY_G0000501;transcript_name=CHM13_chrY_T0001467;gene_name=USP9YP14;ID=CHM13_chrY_T0001467;Name=USP9YP14
CHM13_chrY	CAT	exon	19387573	19387706	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=CHM13_chrY_T0001467;gene_id=CHM13_chrY_G0000501;Parent=CHM13_chrY_T0001467;transcript_name=CHM13_chrY_T0001467;gene_name=USP9YP14;ID=exon:CHM13_chrY_T0001467:0;Name=USP9YP14;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19387707	19392678	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=CHM13_chrY_T0001467;gene_id=CHM13_chrY_G0000501;Parent=CHM13_chrY_T0001467;transcript_name=CHM13_chrY_T0001467;gene_name=USP9YP14;ID=intron:CHM13_chrY_T0001467:0;Name=USP9YP14;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19392679	19392835	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=CHM13_chrY_T0001467;gene_id=CHM13_chrY_G0000501;Parent=CHM13_chrY_T0001467;transcript_name=CHM13_chrY_T0001467;gene_name=USP9YP14;ID=exon:CHM13_chrY_T0001467:1;Name=USP9YP14;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19392836	19393247	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=CHM13_chrY_T0001467;gene_id=CHM13_chrY_G0000501;Parent=CHM13_chrY_T0001467;transcript_name=CHM13_chrY_T0001467;gene_name=USP9YP14;ID=intron:CHM13_chrY_T0001467:1;Name=USP9YP14;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19393248	19393423	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=CHM13_chrY_T0001467;gene_id=CHM13_chrY_G0000501;Parent=CHM13_chrY_T0001467;transcript_name=CHM13_chrY_T0001467;gene_name=USP9YP14;ID=exon:CHM13_chrY_T0001467:2;Name=USP9YP14;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19393424	19393799	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=CHM13_chrY_T0001467;gene_id=CHM13_chrY_G0000501;Parent=CHM13_chrY_T0001467;transcript_name=CHM13_chrY_T0001467;gene_name=USP9YP14;ID=intron:CHM13_chrY_T0001467:2;Name=USP9YP14;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19393800	19393895	.	+	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=CHM13_chrY_T0001467;gene_id=CHM13_chrY_G0000501;Parent=CHM13_chrY_T0001467;transcript_name=CHM13_chrY_T0001467;gene_name=USP9YP14;ID=exon:CHM13_chrY_T0001467:3;Name=USP9YP14;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19392996	19393157	.	+	.	source_gene_common_name=RNU1-48P;source_gene=ENSG00000252209.1;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;gene_id=CHM13_chrY_G0000502;gene_biotype=snRNA;gene_name=RNU1-48P;gene_sources=liftoff;ID=CHM13_chrY_G0000502;Name=RNU1-48P
CHM13_chrY	CAT	transcript	19392996	19393157	1000	+	.	source_transcript=ENST00000516400.1;source_transcript_name=RNU1-48P-201;source_gene=ENSG00000252209.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252209.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516400.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516400.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-48P;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;transcript_id=CHM13_chrY_T0001468;gene_id=CHM13_chrY_G0000502;Parent=CHM13_chrY_G0000502;transcript_name=CHM13_chrY_T0001468;gene_name=RNU1-48P;ID=CHM13_chrY_T0001468;Name=RNU1-48P
CHM13_chrY	CAT	exon	19392996	19393157	.	+	.	source_transcript=ENST00000516400.1;source_transcript_name=RNU1-48P-201;source_gene=ENSG00000252209.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252209.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516400.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516400.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-48P;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;transcript_id=CHM13_chrY_T0001468;gene_id=CHM13_chrY_G0000502;Parent=CHM13_chrY_T0001468;transcript_name=CHM13_chrY_T0001468;gene_name=RNU1-48P;ID=exon:CHM13_chrY_T0001468:0;Name=RNU1-48P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19397410	19400786	.	-	.	source_gene_common_name=USP9YP5;source_gene=ENSG00000249634.1;alternative_source_transcripts=ENST00000511770.1;gene_id=CHM13_chrY_G0000503;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP5;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000503;Name=USP9YP5
CHM13_chrY	CAT	transcript	19397410	19400786	1000	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=CHM13_chrY_T0001469;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_G0000503;transcript_name=CHM13_chrY_T0001469;gene_name=USP9YP5;ID=CHM13_chrY_T0001469;Name=USP9YP5
CHM13_chrY	CAT	exon	19397410	19397600	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=CHM13_chrY_T0001469;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_T0001469;transcript_name=CHM13_chrY_T0001469;gene_name=USP9YP5;ID=exon:CHM13_chrY_T0001469:0;Name=USP9YP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19397601	19399504	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=CHM13_chrY_T0001469;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_T0001469;transcript_name=CHM13_chrY_T0001469;gene_name=USP9YP5;ID=intron:CHM13_chrY_T0001469:0;Name=USP9YP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19399505	19399796	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=CHM13_chrY_T0001469;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_T0001469;transcript_name=CHM13_chrY_T0001469;gene_name=USP9YP5;ID=exon:CHM13_chrY_T0001469:1;Name=USP9YP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19399797	19400565	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=CHM13_chrY_T0001469;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_T0001469;transcript_name=CHM13_chrY_T0001469;gene_name=USP9YP5;ID=intron:CHM13_chrY_T0001469:1;Name=USP9YP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19400566	19400786	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=transMap;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;alternative_source_transcripts=ENST00000511770.1;transcript_id=CHM13_chrY_T0001469;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_T0001469;transcript_name=CHM13_chrY_T0001469;gene_name=USP9YP5;ID=exon:CHM13_chrY_T0001469:2;Name=USP9YP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19397410	19400786	1000	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=CHM13_chrY_T0001470;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_G0000503;transcript_name=CHM13_chrY_T0001470;gene_name=USP9YP5;ID=CHM13_chrY_T0001470;Name=USP9YP5
CHM13_chrY	CAT	exon	19397410	19397600	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=CHM13_chrY_T0001470;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_T0001470;transcript_name=CHM13_chrY_T0001470;gene_name=USP9YP5;ID=exon:CHM13_chrY_T0001470:0;Name=USP9YP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19397601	19399504	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=CHM13_chrY_T0001470;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_T0001470;transcript_name=CHM13_chrY_T0001470;gene_name=USP9YP5;ID=intron:CHM13_chrY_T0001470:0;Name=USP9YP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19399505	19399593	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=CHM13_chrY_T0001470;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_T0001470;transcript_name=CHM13_chrY_T0001470;gene_name=USP9YP5;ID=exon:CHM13_chrY_T0001470:1;Name=USP9YP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19399594	19399671	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=CHM13_chrY_T0001470;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_T0001470;transcript_name=CHM13_chrY_T0001470;gene_name=USP9YP5;ID=intron:CHM13_chrY_T0001470:1;Name=USP9YP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19399672	19399796	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=CHM13_chrY_T0001470;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_T0001470;transcript_name=CHM13_chrY_T0001470;gene_name=USP9YP5;ID=exon:CHM13_chrY_T0001470:2;Name=USP9YP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19399797	19400565	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=CHM13_chrY_T0001470;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_T0001470;transcript_name=CHM13_chrY_T0001470;gene_name=USP9YP5;ID=intron:CHM13_chrY_T0001470:2;Name=USP9YP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19400566	19400786	.	-	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=CHM13_chrY_T0001470;gene_id=CHM13_chrY_G0000503;Parent=CHM13_chrY_T0001470;transcript_name=CHM13_chrY_T0001470;gene_name=USP9YP5;ID=exon:CHM13_chrY_T0001470:3;Name=USP9YP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19415064	19415555	.	+	.	source_gene_common_name=XKRYP1;source_gene=ENSG00000238067.1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;gene_id=CHM13_chrY_G0000504;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP1;gene_sources=liftoff;ID=CHM13_chrY_G0000504;Name=XKRYP1
CHM13_chrY	CAT	transcript	19415064	19415555	1000	+	.	source_transcript=ENST00000423438.1;source_transcript_name=XKRYP1-201;source_gene=ENSG00000238067.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238067.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423438.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;transcript_id=CHM13_chrY_T0001471;gene_id=CHM13_chrY_G0000504;Parent=CHM13_chrY_G0000504;transcript_name=CHM13_chrY_T0001471;gene_name=XKRYP1;ID=CHM13_chrY_T0001471;Name=XKRYP1
CHM13_chrY	CAT	exon	19415064	19415555	.	+	.	source_transcript=ENST00000423438.1;source_transcript_name=XKRYP1-201;source_gene=ENSG00000238067.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238067.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423438.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;transcript_id=CHM13_chrY_T0001471;gene_id=CHM13_chrY_G0000504;Parent=CHM13_chrY_T0001471;transcript_name=CHM13_chrY_T0001471;gene_name=XKRYP1;ID=exon:CHM13_chrY_T0001471:0;Name=XKRYP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19438813	19439143	.	-	.	source_gene_common_name=ELOCP7;source_gene=ENSG00000230377.1;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;gene_id=CHM13_chrY_G0000505;gene_biotype=processed_pseudogene;gene_name=ELOCP7;gene_sources=liftoff;ID=CHM13_chrY_G0000505;Name=ELOCP7
CHM13_chrY	CAT	transcript	19438813	19439143	1000	-	.	source_transcript=ENST00000439968.1;source_transcript_name=ELOCP7-201;source_gene=ENSG00000230377.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230377.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439968.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP7;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;transcript_id=CHM13_chrY_T0001472;gene_id=CHM13_chrY_G0000505;Parent=CHM13_chrY_G0000505;transcript_name=CHM13_chrY_T0001472;gene_name=ELOCP7;ID=CHM13_chrY_T0001472;Name=ELOCP7
CHM13_chrY	CAT	exon	19438813	19439143	.	-	.	source_transcript=ENST00000439968.1;source_transcript_name=ELOCP7-201;source_gene=ENSG00000230377.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230377.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439968.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP7;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;transcript_id=CHM13_chrY_T0001472;gene_id=CHM13_chrY_G0000505;Parent=CHM13_chrY_T0001472;transcript_name=CHM13_chrY_T0001472;gene_name=ELOCP7;ID=exon:CHM13_chrY_T0001472:0;Name=ELOCP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19447466	19450614	.	+	.	source_gene_common_name=USP9YP2;source_gene=ENSG00000249501.1;gene_id=CHM13_chrY_G0000506;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP2;gene_sources=liftoff;ID=CHM13_chrY_G0000506;Name=USP9YP2
CHM13_chrY	CAT	transcript	19447466	19450614	1000	+	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;transcript_id=CHM13_chrY_T0001473;gene_id=CHM13_chrY_G0000506;Parent=CHM13_chrY_G0000506;transcript_name=CHM13_chrY_T0001473;gene_name=USP9YP2;ID=CHM13_chrY_T0001473;Name=USP9YP2
CHM13_chrY	CAT	exon	19447466	19447594	.	+	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;transcript_id=CHM13_chrY_T0001473;gene_id=CHM13_chrY_G0000506;Parent=CHM13_chrY_T0001473;transcript_name=CHM13_chrY_T0001473;gene_name=USP9YP2;ID=exon:CHM13_chrY_T0001473:0;Name=USP9YP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19447595	19449331	.	+	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;transcript_id=CHM13_chrY_T0001473;gene_id=CHM13_chrY_G0000506;Parent=CHM13_chrY_T0001473;transcript_name=CHM13_chrY_T0001473;gene_name=USP9YP2;ID=intron:CHM13_chrY_T0001473:0;Name=USP9YP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19449332	19450077	.	+	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;transcript_id=CHM13_chrY_T0001473;gene_id=CHM13_chrY_G0000506;Parent=CHM13_chrY_T0001473;transcript_name=CHM13_chrY_T0001473;gene_name=USP9YP2;ID=exon:CHM13_chrY_T0001473:1;Name=USP9YP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19450078	19450489	.	+	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;transcript_id=CHM13_chrY_T0001473;gene_id=CHM13_chrY_G0000506;Parent=CHM13_chrY_T0001473;transcript_name=CHM13_chrY_T0001473;gene_name=USP9YP2;ID=intron:CHM13_chrY_T0001473:1;Name=USP9YP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19450490	19450614	.	+	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;transcript_id=CHM13_chrY_T0001473;gene_id=CHM13_chrY_G0000506;Parent=CHM13_chrY_T0001473;transcript_name=CHM13_chrY_T0001473;gene_name=USP9YP2;ID=exon:CHM13_chrY_T0001473:2;Name=USP9YP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19453178	19495418	.	+	.	source_gene_common_name=HSFY1;source_gene=ENSG00000172468.14;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;gene_id=CHM13_chrY_G0000507;gene_biotype=protein_coding;gene_name=HSFY1;gene_sources=liftoff;ID=CHM13_chrY_G0000507;Name=HSFY1
CHM13_chrY	CAT	transcript	19453178	19495418	100	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=CHM13_chrY_T0001474;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_G0000507;transcript_name=CHM13_chrY_T0001474;gene_name=HSFY1;ID=CHM13_chrY_T0001474;Name=HSFY1
CHM13_chrY	CAT	exon	19453178	19453787	.	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=CHM13_chrY_T0001474;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001474;transcript_name=CHM13_chrY_T0001474;gene_name=HSFY1;ID=exon:CHM13_chrY_T0001474:0;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19453275	19453787	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=CHM13_chrY_T0001474;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001474;transcript_name=CHM13_chrY_T0001474;gene_name=HSFY1;ID=CDS:CHM13_chrY_T0001474:0;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	19453275	19453277	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=CHM13_chrY_T0001474;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001474;transcript_name=CHM13_chrY_T0001474;gene_name=HSFY1;ID=start_codon:CHM13_chrY_T0001474;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19453788	19494990	.	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=CHM13_chrY_T0001474;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001474;transcript_name=CHM13_chrY_T0001474;gene_name=HSFY1;ID=intron:CHM13_chrY_T0001474:0;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19494991	19495418	.	+	.	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=CHM13_chrY_T0001474;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001474;transcript_name=CHM13_chrY_T0001474;gene_name=HSFY1;ID=exon:CHM13_chrY_T0001474:1;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19494991	19495089	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=CHM13_chrY_T0001474;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001474;transcript_name=CHM13_chrY_T0001474;gene_name=HSFY1;ID=CDS:CHM13_chrY_T0001474:1;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	19495087	19495089	.	+	0	source_transcript=ENST00000309834.8;source_transcript_name=HSFY1-202;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000309834.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000309834.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000309834.8,ENST00000309834.8;transcript_id=CHM13_chrY_T0001474;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001474;transcript_name=CHM13_chrY_T0001474;gene_name=HSFY1;ID=stop_codon:CHM13_chrY_T0001474;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19453178	19495418	1000	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_G0000507;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=CHM13_chrY_T0001475;Name=HSFY1
CHM13_chrY	CAT	exon	19453178	19453787	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=exon:CHM13_chrY_T0001475:0;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19453275	19453787	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=CDS:CHM13_chrY_T0001475:0;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	19453275	19453277	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=start_codon:CHM13_chrY_T0001475;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19453788	19456600	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=intron:CHM13_chrY_T0001475:0;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19456601	19456710	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=exon:CHM13_chrY_T0001475:1;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19456601	19456710	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=CDS:CHM13_chrY_T0001475:1;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19456711	19457271	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=intron:CHM13_chrY_T0001475:1;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19457272	19457358	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=exon:CHM13_chrY_T0001475:2;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19457272	19457293	.	+	1	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=CDS:CHM13_chrY_T0001475:2;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	19457291	19457293	.	+	0	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=stop_codon:CHM13_chrY_T0001475;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19457359	19458405	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=intron:CHM13_chrY_T0001475:2;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19458406	19458560	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=exon:CHM13_chrY_T0001475:3;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19458561	19489127	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=intron:CHM13_chrY_T0001475:3;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19489128	19489213	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=exon:CHM13_chrY_T0001475:4;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19489214	19494990	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=intron:CHM13_chrY_T0001475:4;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19494991	19495418	.	+	.	source_transcript=ENST00000338876.8;source_transcript_name=HSFY1-203;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000338876.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000338876.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000338876.8,ENST00000338876.8;transcript_id=CHM13_chrY_T0001475;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001475;transcript_name=CHM13_chrY_T0001475;gene_name=HSFY1;ID=exon:CHM13_chrY_T0001475:5;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19453207	19455079	100	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=CHM13_chrY_T0001476;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_G0000507;transcript_name=CHM13_chrY_T0001476;gene_name=HSFY1;ID=CHM13_chrY_T0001476;Name=HSFY1
CHM13_chrY	CAT	exon	19453207	19453787	.	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=CHM13_chrY_T0001476;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001476;transcript_name=CHM13_chrY_T0001476;gene_name=HSFY1;ID=exon:CHM13_chrY_T0001476:0;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19453275	19453787	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=CHM13_chrY_T0001476;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001476;transcript_name=CHM13_chrY_T0001476;gene_name=HSFY1;ID=CDS:CHM13_chrY_T0001476:0;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	19453275	19453277	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=CHM13_chrY_T0001476;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001476;transcript_name=CHM13_chrY_T0001476;gene_name=HSFY1;ID=start_codon:CHM13_chrY_T0001476;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19453788	19454265	.	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=CHM13_chrY_T0001476;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001476;transcript_name=CHM13_chrY_T0001476;gene_name=HSFY1;ID=intron:CHM13_chrY_T0001476:0;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19454266	19455079	.	+	.	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=CHM13_chrY_T0001476;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001476;transcript_name=CHM13_chrY_T0001476;gene_name=HSFY1;ID=exon:CHM13_chrY_T0001476:1;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19454266	19454958	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=CHM13_chrY_T0001476;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001476;transcript_name=CHM13_chrY_T0001476;gene_name=HSFY1;ID=CDS:CHM13_chrY_T0001476:1;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	19454956	19454958	.	+	0	source_transcript=ENST00000307393.3;source_transcript_name=HSFY1-201;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000307393.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000307393.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000307393.3,ENST00000307393.3;transcript_id=CHM13_chrY_T0001476;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001476;transcript_name=CHM13_chrY_T0001476;gene_name=HSFY1;ID=stop_codon:CHM13_chrY_T0001476;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19453207	19457954	100	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=CHM13_chrY_T0001477;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_G0000507;transcript_name=CHM13_chrY_T0001477;gene_name=HSFY1;ID=CHM13_chrY_T0001477;Name=HSFY1
CHM13_chrY	CAT	exon	19453207	19453787	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=CHM13_chrY_T0001477;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001477;transcript_name=CHM13_chrY_T0001477;gene_name=HSFY1;ID=exon:CHM13_chrY_T0001477:0;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19453275	19453787	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=CHM13_chrY_T0001477;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001477;transcript_name=CHM13_chrY_T0001477;gene_name=HSFY1;ID=CDS:CHM13_chrY_T0001477:0;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	19453275	19453277	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=CHM13_chrY_T0001477;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001477;transcript_name=CHM13_chrY_T0001477;gene_name=HSFY1;ID=start_codon:CHM13_chrY_T0001477;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19453788	19456600	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=CHM13_chrY_T0001477;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001477;transcript_name=CHM13_chrY_T0001477;gene_name=HSFY1;ID=intron:CHM13_chrY_T0001477:0;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19456601	19456710	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=CHM13_chrY_T0001477;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001477;transcript_name=CHM13_chrY_T0001477;gene_name=HSFY1;ID=exon:CHM13_chrY_T0001477:1;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19456601	19456710	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=CHM13_chrY_T0001477;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001477;transcript_name=CHM13_chrY_T0001477;gene_name=HSFY1;ID=CDS:CHM13_chrY_T0001477:1;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19456711	19457271	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=CHM13_chrY_T0001477;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001477;transcript_name=CHM13_chrY_T0001477;gene_name=HSFY1;ID=intron:CHM13_chrY_T0001477:1;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19457272	19457954	.	+	.	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=CHM13_chrY_T0001477;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001477;transcript_name=CHM13_chrY_T0001477;gene_name=HSFY1;ID=exon:CHM13_chrY_T0001477:2;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19457272	19457293	.	+	1	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=CHM13_chrY_T0001477;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001477;transcript_name=CHM13_chrY_T0001477;gene_name=HSFY1;ID=CDS:CHM13_chrY_T0001477:2;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	19457291	19457293	.	+	0	source_transcript=ENST00000382856.2;source_transcript_name=HSFY1-204;source_gene=ENSG00000172468.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172468.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382856.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382856.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=ENST00000382856.2,ENST00000382856.2;transcript_id=CHM13_chrY_T0001477;gene_id=CHM13_chrY_G0000507;Parent=CHM13_chrY_T0001477;transcript_name=CHM13_chrY_T0001477;gene_name=HSFY1;ID=stop_codon:CHM13_chrY_T0001477;Name=HSFY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19484872	19485015	.	+	.	source_gene_common_name=GPM6BP1;source_gene=ENSG00000230458.1;alternative_source_transcripts=ENST00000446387.1,ENST00000446387.1;gene_id=CHM13_chrY_G0000508;gene_biotype=unprocessed_pseudogene;gene_name=GPM6BP1;gene_sources=liftoff;ID=CHM13_chrY_G0000508;Name=GPM6BP1
CHM13_chrY	CAT	transcript	19484872	19485015	1000	+	.	source_transcript=ENST00000446387.1;source_transcript_name=GPM6BP1-201;source_gene=ENSG00000230458.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230458.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446387.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP1;alternative_source_transcripts=ENST00000446387.1,ENST00000446387.1;transcript_id=CHM13_chrY_T0001478;gene_id=CHM13_chrY_G0000508;Parent=CHM13_chrY_G0000508;transcript_name=CHM13_chrY_T0001478;gene_name=GPM6BP1;ID=CHM13_chrY_T0001478;Name=GPM6BP1
CHM13_chrY	CAT	exon	19484872	19485015	.	+	.	source_transcript=ENST00000446387.1;source_transcript_name=GPM6BP1-201;source_gene=ENSG00000230458.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230458.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446387.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP1;alternative_source_transcripts=ENST00000446387.1,ENST00000446387.1;transcript_id=CHM13_chrY_T0001478;gene_id=CHM13_chrY_G0000508;Parent=CHM13_chrY_T0001478;transcript_name=CHM13_chrY_T0001478;gene_name=GPM6BP1;ID=exon:CHM13_chrY_T0001478:0;Name=GPM6BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19487661	19504565	.	-	.	source_gene_common_name=TTTY9B;source_gene=ENSG00000131007.10;gene_id=CHM13_chrY_G0000509;gene_biotype=lncRNA;gene_name=TTTY9B;gene_sources=liftoff;ID=CHM13_chrY_G0000509;Name=TTTY9B
CHM13_chrY	CAT	transcript	19487661	19496976	1000	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001479;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_G0000509;transcript_name=CHM13_chrY_T0001479;gene_name=TTTY9B;ID=CHM13_chrY_T0001479;Name=TTTY9B
CHM13_chrY	CAT	exon	19487661	19488803	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001479;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001479;transcript_name=CHM13_chrY_T0001479;gene_name=TTTY9B;ID=exon:CHM13_chrY_T0001479:0;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19488804	19493866	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001479;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001479;transcript_name=CHM13_chrY_T0001479;gene_name=TTTY9B;ID=intron:CHM13_chrY_T0001479:0;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19493867	19494003	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001479;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001479;transcript_name=CHM13_chrY_T0001479;gene_name=TTTY9B;ID=exon:CHM13_chrY_T0001479:1;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19494004	19494585	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001479;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001479;transcript_name=CHM13_chrY_T0001479;gene_name=TTTY9B;ID=intron:CHM13_chrY_T0001479:1;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19494586	19494699	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001479;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001479;transcript_name=CHM13_chrY_T0001479;gene_name=TTTY9B;ID=exon:CHM13_chrY_T0001479:2;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19494700	19495060	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001479;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001479;transcript_name=CHM13_chrY_T0001479;gene_name=TTTY9B;ID=intron:CHM13_chrY_T0001479:2;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19495061	19495161	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001479;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001479;transcript_name=CHM13_chrY_T0001479;gene_name=TTTY9B;ID=exon:CHM13_chrY_T0001479:3;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19495162	19496834	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001479;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001479;transcript_name=CHM13_chrY_T0001479;gene_name=TTTY9B;ID=intron:CHM13_chrY_T0001479:3;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19496835	19496976	.	-	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001479;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001479;transcript_name=CHM13_chrY_T0001479;gene_name=TTTY9B;ID=exon:CHM13_chrY_T0001479:4;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19487661	19495167	1000	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001480;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_G0000509;transcript_name=CHM13_chrY_T0001480;gene_name=TTTY9B;ID=CHM13_chrY_T0001480;Name=TTTY9B
CHM13_chrY	CAT	exon	19487661	19488803	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001480;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001480;transcript_name=CHM13_chrY_T0001480;gene_name=TTTY9B;ID=exon:CHM13_chrY_T0001480:0;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19488804	19493866	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001480;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001480;transcript_name=CHM13_chrY_T0001480;gene_name=TTTY9B;ID=intron:CHM13_chrY_T0001480:0;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19493867	19494003	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001480;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001480;transcript_name=CHM13_chrY_T0001480;gene_name=TTTY9B;ID=exon:CHM13_chrY_T0001480:1;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19494004	19494585	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001480;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001480;transcript_name=CHM13_chrY_T0001480;gene_name=TTTY9B;ID=intron:CHM13_chrY_T0001480:1;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19494586	19494699	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001480;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001480;transcript_name=CHM13_chrY_T0001480;gene_name=TTTY9B;ID=exon:CHM13_chrY_T0001480:2;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19494700	19495060	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001480;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001480;transcript_name=CHM13_chrY_T0001480;gene_name=TTTY9B;ID=intron:CHM13_chrY_T0001480:2;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19495061	19495167	.	-	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001480;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001480;transcript_name=CHM13_chrY_T0001480;gene_name=TTTY9B;ID=exon:CHM13_chrY_T0001480:3;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19496409	19504565	1000	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001482;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_G0000509;transcript_name=CHM13_chrY_T0001482;gene_name=TTTY9B;ID=CHM13_chrY_T0001482;Name=TTTY9B
CHM13_chrY	CAT	exon	19496409	19497054	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001482;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001482;transcript_name=CHM13_chrY_T0001482;gene_name=TTTY9B;ID=exon:CHM13_chrY_T0001482:0;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19497055	19503865	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001482;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001482;transcript_name=CHM13_chrY_T0001482;gene_name=TTTY9B;ID=intron:CHM13_chrY_T0001482:0;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19503866	19504127	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001482;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001482;transcript_name=CHM13_chrY_T0001482;gene_name=TTTY9B;ID=exon:CHM13_chrY_T0001482:1;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19504128	19504308	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001482;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001482;transcript_name=CHM13_chrY_T0001482;gene_name=TTTY9B;ID=intron:CHM13_chrY_T0001482:1;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19504309	19504565	.	-	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=CHM13_chrY_T0001482;gene_id=CHM13_chrY_G0000509;Parent=CHM13_chrY_T0001482;transcript_name=CHM13_chrY_T0001482;gene_name=TTTY9B;ID=exon:CHM13_chrY_T0001482:2;Name=TTTY9B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19488518	19535532	.	-	.	source_gene_common_name=OFD1P5Y;source_gene=ENSG00000240438.2;gene_id=CHM13_chrY_G0000510;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P5Y;gene_sources=liftoff;ID=CHM13_chrY_G0000510;Name=OFD1P5Y
CHM13_chrY	CAT	transcript	19488518	19535532	1000	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_G0000510;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=CHM13_chrY_T0001481;Name=OFD1P5Y
CHM13_chrY	CAT	exon	19488518	19488811	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:0;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19488812	19489108	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:0;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19489109	19489175	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:1;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19489176	19490364	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:1;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19490365	19490515	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:2;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19490516	19493866	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:2;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19493867	19494003	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:3;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19494004	19495060	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:3;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19495061	19495161	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:4;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19495162	19505673	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:4;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19505674	19505785	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:5;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19505786	19506160	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:5;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19506161	19506787	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:6;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19506788	19508834	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:6;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19508835	19508946	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:7;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19508947	19509480	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:7;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19509481	19509610	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:8;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19509611	19510477	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:8;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19510478	19510613	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:9;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19510614	19512201	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:9;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19512202	19512275	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:10;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19512276	19513911	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:10;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19513912	19514039	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:11;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19514040	19515791	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:11;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19515792	19515898	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:12;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19515899	19518694	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:12;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19518695	19518845	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:13;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19518846	19520650	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:13;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19520651	19520735	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:14;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19520736	19528520	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:14;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19528521	19528692	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:15;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19528693	19533474	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:15;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19533475	19533611	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:16;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19533612	19535427	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=intron:CHM13_chrY_T0001481:16;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19535428	19535532	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=CHM13_chrY_T0001481;gene_id=CHM13_chrY_G0000510;Parent=CHM13_chrY_T0001481;transcript_name=CHM13_chrY_T0001481;gene_name=OFD1P5Y;ID=exon:CHM13_chrY_T0001481:17;Name=OFD1P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19502760	19535548	.	+	.	source_gene_common_name=ENSG00000301107;source_gene=ENSG00000301107.1;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;gene_id=CHM13_chrY_G0000511;gene_biotype=lncRNA;gene_name=ENSG00000301107;gene_sources=liftoff;ID=CHM13_chrY_G0000511;Name=ENSG00000301107
CHM13_chrY	CAT	transcript	19502760	19535548	1000	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=CHM13_chrY_T0001483;gene_id=CHM13_chrY_G0000511;Parent=CHM13_chrY_G0000511;transcript_name=CHM13_chrY_T0001483;gene_name=ENSG00000301107;ID=CHM13_chrY_T0001483;Name=ENSG00000301107
CHM13_chrY	CAT	exon	19502760	19502842	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=CHM13_chrY_T0001483;gene_id=CHM13_chrY_G0000511;Parent=CHM13_chrY_T0001483;transcript_name=CHM13_chrY_T0001483;gene_name=ENSG00000301107;ID=exon:CHM13_chrY_T0001483:0;Name=ENSG00000301107;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19502843	19526269	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=CHM13_chrY_T0001483;gene_id=CHM13_chrY_G0000511;Parent=CHM13_chrY_T0001483;transcript_name=CHM13_chrY_T0001483;gene_name=ENSG00000301107;ID=intron:CHM13_chrY_T0001483:0;Name=ENSG00000301107;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19526270	19526360	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=CHM13_chrY_T0001483;gene_id=CHM13_chrY_G0000511;Parent=CHM13_chrY_T0001483;transcript_name=CHM13_chrY_T0001483;gene_name=ENSG00000301107;ID=exon:CHM13_chrY_T0001483:1;Name=ENSG00000301107;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19526361	19535316	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=CHM13_chrY_T0001483;gene_id=CHM13_chrY_G0000511;Parent=CHM13_chrY_T0001483;transcript_name=CHM13_chrY_T0001483;gene_name=ENSG00000301107;ID=intron:CHM13_chrY_T0001483:1;Name=ENSG00000301107;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19535317	19535548	.	+	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;alternative_source_transcripts=ENST00000776238.1,ENST00000776238.1;transcript_id=CHM13_chrY_T0001483;gene_id=CHM13_chrY_G0000511;Parent=CHM13_chrY_T0001483;transcript_name=CHM13_chrY_T0001483;gene_name=ENSG00000301107;ID=exon:CHM13_chrY_T0001483:2;Name=ENSG00000301107;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19556148	19556756	.	+	.	source_gene_common_name=RAB9AP4;source_gene=ENSG00000235479.1;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;gene_id=CHM13_chrY_G0000512;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP4;gene_sources=liftoff;ID=CHM13_chrY_G0000512;Name=RAB9AP4
CHM13_chrY	CAT	transcript	19556148	19556756	1000	+	.	source_transcript=ENST00000415230.1;source_transcript_name=RAB9AP4-201;source_gene=ENSG00000235479.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235479.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415230.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP4;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;transcript_id=CHM13_chrY_T0001484;gene_id=CHM13_chrY_G0000512;Parent=CHM13_chrY_G0000512;transcript_name=CHM13_chrY_T0001484;gene_name=RAB9AP4;ID=CHM13_chrY_T0001484;Name=RAB9AP4
CHM13_chrY	CAT	exon	19556148	19556756	.	+	.	source_transcript=ENST00000415230.1;source_transcript_name=RAB9AP4-201;source_gene=ENSG00000235479.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235479.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP4;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;transcript_id=CHM13_chrY_T0001484;gene_id=CHM13_chrY_G0000512;Parent=CHM13_chrY_T0001484;transcript_name=CHM13_chrY_T0001484;gene_name=RAB9AP4;ID=exon:CHM13_chrY_T0001484:0;Name=RAB9AP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19561994	19562664	.	-	.	source_gene_common_name=TRAPPC2P7;source_gene=ENSG00000249606.1;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;gene_id=CHM13_chrY_G0000513;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P7;gene_sources=liftoff;ID=CHM13_chrY_G0000513;Name=TRAPPC2P7
CHM13_chrY	CAT	transcript	19561994	19562664	1000	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=CHM13_chrY_T0001485;gene_id=CHM13_chrY_G0000513;Parent=CHM13_chrY_G0000513;transcript_name=CHM13_chrY_T0001485;gene_name=TRAPPC2P7;ID=CHM13_chrY_T0001485;Name=TRAPPC2P7
CHM13_chrY	CAT	exon	19561994	19562079	.	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=CHM13_chrY_T0001485;gene_id=CHM13_chrY_G0000513;Parent=CHM13_chrY_T0001485;transcript_name=CHM13_chrY_T0001485;gene_name=TRAPPC2P7;ID=exon:CHM13_chrY_T0001485:0;Name=TRAPPC2P7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19562080	19562519	.	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=CHM13_chrY_T0001485;gene_id=CHM13_chrY_G0000513;Parent=CHM13_chrY_T0001485;transcript_name=CHM13_chrY_T0001485;gene_name=TRAPPC2P7;ID=intron:CHM13_chrY_T0001485:0;Name=TRAPPC2P7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19562520	19562664	.	-	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=CHM13_chrY_T0001485;gene_id=CHM13_chrY_G0000513;Parent=CHM13_chrY_T0001485;transcript_name=CHM13_chrY_T0001485;gene_name=TRAPPC2P7;ID=exon:CHM13_chrY_T0001485:1;Name=TRAPPC2P7;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19580080	19585302	.	+	.	source_gene_common_name=ENSG00000302211;source_gene=ENSG00000302211.1;gene_id=CHM13_chrY_G0000514;gene_biotype=lncRNA;gene_name=ENSG00000302211;gene_sources=liftoff;ID=CHM13_chrY_G0000514;Name=ENSG00000302211
CHM13_chrY	CAT	transcript	19580080	19582414	1000	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001486;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_G0000514;transcript_name=CHM13_chrY_T0001486;gene_name=ENSG00000302211;ID=CHM13_chrY_T0001486;Name=ENSG00000302211
CHM13_chrY	CAT	exon	19580080	19580211	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001486;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_T0001486;transcript_name=CHM13_chrY_T0001486;gene_name=ENSG00000302211;ID=exon:CHM13_chrY_T0001486:0;Name=ENSG00000302211;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19580212	19580685	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001486;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_T0001486;transcript_name=CHM13_chrY_T0001486;gene_name=ENSG00000302211;ID=intron:CHM13_chrY_T0001486:0;Name=ENSG00000302211;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19580686	19580784	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001486;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_T0001486;transcript_name=CHM13_chrY_T0001486;gene_name=ENSG00000302211;ID=exon:CHM13_chrY_T0001486:1;Name=ENSG00000302211;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19580785	19581838	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001486;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_T0001486;transcript_name=CHM13_chrY_T0001486;gene_name=ENSG00000302211;ID=intron:CHM13_chrY_T0001486:1;Name=ENSG00000302211;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19581839	19582414	.	+	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001486;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_T0001486;transcript_name=CHM13_chrY_T0001486;gene_name=ENSG00000302211;ID=exon:CHM13_chrY_T0001486:2;Name=ENSG00000302211;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19580156	19585302	1000	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001487;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_G0000514;transcript_name=CHM13_chrY_T0001487;gene_name=ENSG00000302211;ID=CHM13_chrY_T0001487;Name=ENSG00000302211
CHM13_chrY	CAT	exon	19580156	19580211	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001487;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_T0001487;transcript_name=CHM13_chrY_T0001487;gene_name=ENSG00000302211;ID=exon:CHM13_chrY_T0001487:0;Name=ENSG00000302211;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19580212	19580685	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001487;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_T0001487;transcript_name=CHM13_chrY_T0001487;gene_name=ENSG00000302211;ID=intron:CHM13_chrY_T0001487:0;Name=ENSG00000302211;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19580686	19580784	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001487;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_T0001487;transcript_name=CHM13_chrY_T0001487;gene_name=ENSG00000302211;ID=exon:CHM13_chrY_T0001487:1;Name=ENSG00000302211;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19580785	19581838	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001487;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_T0001487;transcript_name=CHM13_chrY_T0001487;gene_name=ENSG00000302211;ID=intron:CHM13_chrY_T0001487:1;Name=ENSG00000302211;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19581839	19582041	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001487;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_T0001487;transcript_name=CHM13_chrY_T0001487;gene_name=ENSG00000302211;ID=exon:CHM13_chrY_T0001487:2;Name=ENSG00000302211;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19582042	19585063	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001487;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_T0001487;transcript_name=CHM13_chrY_T0001487;gene_name=ENSG00000302211;ID=intron:CHM13_chrY_T0001487:2;Name=ENSG00000302211;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19585064	19585302	.	+	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=CHM13_chrY_T0001487;gene_id=CHM13_chrY_G0000514;Parent=CHM13_chrY_T0001487;transcript_name=CHM13_chrY_T0001487;gene_name=ENSG00000302211;ID=exon:CHM13_chrY_T0001487:3;Name=ENSG00000302211;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19580502	19644565	.	+	.	source_gene_common_name=OFD1P6Y;source_gene=ENSG00000242153.8;gene_id=CHM13_chrY_G0000515;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P6Y;gene_sources=liftoff;ID=CHM13_chrY_G0000515;Name=OFD1P6Y
CHM13_chrY	CAT	transcript	19580502	19644565	1000	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_G0000515;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=CHM13_chrY_T0001488;Name=OFD1P6Y
CHM13_chrY	CAT	exon	19580502	19580513	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:0;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19580514	19580685	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:0;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19580686	19580784	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:1;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19580785	19581838	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:1;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19581839	19582041	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:2;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19582042	19584910	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:2;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19584911	19584978	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:3;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19584979	19585066	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:3;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19585067	19585097	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:4;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19585098	19597797	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:4;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19597798	19597902	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:5;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19597903	19599718	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:5;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19599719	19599855	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:6;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19599856	19604637	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:6;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19604638	19604809	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:7;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19604810	19617433	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:7;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19617434	19617540	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:8;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19617541	19619293	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:8;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19619294	19619392	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:9;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19619393	19621056	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:9;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19621057	19621130	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:10;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19621131	19622718	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:10;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19622719	19622854	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:11;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19622855	19623721	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:11;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19623722	19623851	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:12;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19623852	19624385	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:12;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19624386	19624497	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:13;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19624498	19626544	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:13;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19626545	19627172	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:14;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19627173	19627546	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:14;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19627547	19627658	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:15;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19627659	19638172	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:15;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19638173	19638273	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:16;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19638274	19639330	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:16;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19639331	19639467	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:17;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19639468	19642818	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:17;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19642819	19642969	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:18;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19642970	19644158	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:18;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19644159	19644225	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:19;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19644226	19644522	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=intron:CHM13_chrY_T0001488:19;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19644523	19644565	.	+	.	source_transcript=ENST00000451061.5;source_transcript_name=OFD1P6Y-201;source_gene=ENSG00000242153.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242153.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451061.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451061.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P6Y;transcript_id=CHM13_chrY_T0001488;gene_id=CHM13_chrY_G0000515;Parent=CHM13_chrY_T0001488;transcript_name=CHM13_chrY_T0001488;gene_name=OFD1P6Y;ID=exon:CHM13_chrY_T0001488:20;Name=OFD1P6Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19597787	19630602	.	-	.	source_gene_common_name=ENSG00000295232;source_gene=ENSG00000295232.1;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;gene_id=CHM13_chrY_G0000516;gene_biotype=lncRNA;gene_name=ENSG00000295232;gene_sources=liftoff;ID=CHM13_chrY_G0000516;Name=ENSG00000295232
CHM13_chrY	CAT	transcript	19597787	19630602	1000	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=CHM13_chrY_T0001489;gene_id=CHM13_chrY_G0000516;Parent=CHM13_chrY_G0000516;transcript_name=CHM13_chrY_T0001489;gene_name=ENSG00000295232;ID=CHM13_chrY_T0001489;Name=ENSG00000295232
CHM13_chrY	CAT	exon	19597787	19598013	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=CHM13_chrY_T0001489;gene_id=CHM13_chrY_G0000516;Parent=CHM13_chrY_T0001489;transcript_name=CHM13_chrY_T0001489;gene_name=ENSG00000295232;ID=exon:CHM13_chrY_T0001489:0;Name=ENSG00000295232;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19598014	19606969	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=CHM13_chrY_T0001489;gene_id=CHM13_chrY_G0000516;Parent=CHM13_chrY_T0001489;transcript_name=CHM13_chrY_T0001489;gene_name=ENSG00000295232;ID=intron:CHM13_chrY_T0001489:0;Name=ENSG00000295232;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19606970	19607060	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=CHM13_chrY_T0001489;gene_id=CHM13_chrY_G0000516;Parent=CHM13_chrY_T0001489;transcript_name=CHM13_chrY_T0001489;gene_name=ENSG00000295232;ID=exon:CHM13_chrY_T0001489:1;Name=ENSG00000295232;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19607061	19630488	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=CHM13_chrY_T0001489;gene_id=CHM13_chrY_G0000516;Parent=CHM13_chrY_T0001489;transcript_name=CHM13_chrY_T0001489;gene_name=ENSG00000295232;ID=intron:CHM13_chrY_T0001489:1;Name=ENSG00000295232;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19630489	19630602	.	-	.	source_transcript=ENST00000728750.1;source_transcript_name=ENST00000728750;source_gene=ENSG00000295232.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295232.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728750.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295232;alternative_source_transcripts=ENST00000728750.1,ENST00000728750.1;transcript_id=CHM13_chrY_T0001489;gene_id=CHM13_chrY_G0000516;Parent=CHM13_chrY_T0001489;transcript_name=CHM13_chrY_T0001489;gene_name=ENSG00000295232;ID=exon:CHM13_chrY_T0001489:2;Name=ENSG00000295232;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19636358	19645673	.	+	.	source_gene_common_name=TTTY9A;source_gene=ENSG00000290716.1;gene_id=CHM13_chrY_G0000517;gene_biotype=lncRNA;gene_name=TTTY9A;gene_sources=liftoff;ID=CHM13_chrY_G0000517;Name=TTTY9A
CHM13_chrY	CAT	transcript	19636358	19645673	1000	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=CHM13_chrY_T0001490;gene_id=CHM13_chrY_G0000517;Parent=CHM13_chrY_G0000517;transcript_name=CHM13_chrY_T0001490;gene_name=TTTY9A;ID=CHM13_chrY_T0001490;Name=TTTY9A
CHM13_chrY	CAT	exon	19636358	19636499	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=CHM13_chrY_T0001490;gene_id=CHM13_chrY_G0000517;Parent=CHM13_chrY_T0001490;transcript_name=CHM13_chrY_T0001490;gene_name=TTTY9A;ID=exon:CHM13_chrY_T0001490:0;Name=TTTY9A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19636500	19638172	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=CHM13_chrY_T0001490;gene_id=CHM13_chrY_G0000517;Parent=CHM13_chrY_T0001490;transcript_name=CHM13_chrY_T0001490;gene_name=TTTY9A;ID=intron:CHM13_chrY_T0001490:0;Name=TTTY9A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19638173	19638273	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=CHM13_chrY_T0001490;gene_id=CHM13_chrY_G0000517;Parent=CHM13_chrY_T0001490;transcript_name=CHM13_chrY_T0001490;gene_name=TTTY9A;ID=exon:CHM13_chrY_T0001490:1;Name=TTTY9A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19638274	19638634	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=CHM13_chrY_T0001490;gene_id=CHM13_chrY_G0000517;Parent=CHM13_chrY_T0001490;transcript_name=CHM13_chrY_T0001490;gene_name=TTTY9A;ID=intron:CHM13_chrY_T0001490:1;Name=TTTY9A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19638635	19638748	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=CHM13_chrY_T0001490;gene_id=CHM13_chrY_G0000517;Parent=CHM13_chrY_T0001490;transcript_name=CHM13_chrY_T0001490;gene_name=TTTY9A;ID=exon:CHM13_chrY_T0001490:2;Name=TTTY9A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19638749	19639330	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=CHM13_chrY_T0001490;gene_id=CHM13_chrY_G0000517;Parent=CHM13_chrY_T0001490;transcript_name=CHM13_chrY_T0001490;gene_name=TTTY9A;ID=intron:CHM13_chrY_T0001490:2;Name=TTTY9A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19639331	19639467	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=CHM13_chrY_T0001490;gene_id=CHM13_chrY_G0000517;Parent=CHM13_chrY_T0001490;transcript_name=CHM13_chrY_T0001490;gene_name=TTTY9A;ID=exon:CHM13_chrY_T0001490:3;Name=TTTY9A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19639468	19644530	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=CHM13_chrY_T0001490;gene_id=CHM13_chrY_G0000517;Parent=CHM13_chrY_T0001490;transcript_name=CHM13_chrY_T0001490;gene_name=TTTY9A;ID=intron:CHM13_chrY_T0001490:3;Name=TTTY9A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19644531	19645673	.	+	.	source_transcript=ENST00000432335.1;source_transcript_name=TTTY9A-201;source_gene=ENSG00000290716.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290716.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;transcript_id=CHM13_chrY_T0001490;gene_id=CHM13_chrY_G0000517;Parent=CHM13_chrY_T0001490;transcript_name=CHM13_chrY_T0001490;gene_name=TTTY9A;ID=exon:CHM13_chrY_T0001490:4;Name=TTTY9A;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19637916	19680200	.	-	.	source_gene_common_name=HSFY2;source_gene=ENSG00000169953.12;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;gene_id=CHM13_chrY_G0000518;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=liftoff;ID=CHM13_chrY_G0000518;Name=HSFY2
CHM13_chrY	CAT	transcript	19637916	19680180	100	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=CHM13_chrY_T0001491;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_G0000518;transcript_name=CHM13_chrY_T0001491;gene_name=HSFY2;ID=CHM13_chrY_T0001491;Name=HSFY2
CHM13_chrY	CAT	exon	19637916	19638343	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=CHM13_chrY_T0001491;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001491;transcript_name=CHM13_chrY_T0001491;gene_name=HSFY2;ID=exon:CHM13_chrY_T0001491:0;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19638245	19638343	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=CHM13_chrY_T0001491;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001491;transcript_name=CHM13_chrY_T0001491;gene_name=HSFY2;ID=CDS:CHM13_chrY_T0001491:0;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	19638245	19638247	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=CHM13_chrY_T0001491;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001491;transcript_name=CHM13_chrY_T0001491;gene_name=HSFY2;ID=stop_codon:CHM13_chrY_T0001491;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19638344	19679570	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=CHM13_chrY_T0001491;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001491;transcript_name=CHM13_chrY_T0001491;gene_name=HSFY2;ID=intron:CHM13_chrY_T0001491:0;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19679571	19680180	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=CHM13_chrY_T0001491;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001491;transcript_name=CHM13_chrY_T0001491;gene_name=HSFY2;ID=exon:CHM13_chrY_T0001491:1;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19679571	19680083	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=CHM13_chrY_T0001491;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001491;transcript_name=CHM13_chrY_T0001491;gene_name=HSFY2;ID=CDS:CHM13_chrY_T0001491:1;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	19680081	19680083	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4,ENST00000344884.4;transcript_id=CHM13_chrY_T0001491;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001491;transcript_name=CHM13_chrY_T0001491;gene_name=HSFY2;ID=start_codon:CHM13_chrY_T0001491;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19637916	19680180	1000	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=CHM13_chrY_T0001492;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_G0000518;transcript_name=CHM13_chrY_T0001492;gene_name=HSFY2;ID=CHM13_chrY_T0001492;Name=HSFY2
CHM13_chrY	CAT	exon	19637916	19638343	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=CHM13_chrY_T0001492;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001492;transcript_name=CHM13_chrY_T0001492;gene_name=HSFY2;ID=exon:CHM13_chrY_T0001492:0;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19638344	19644120	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=CHM13_chrY_T0001492;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001492;transcript_name=CHM13_chrY_T0001492;gene_name=HSFY2;ID=intron:CHM13_chrY_T0001492:0;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19644121	19644206	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=CHM13_chrY_T0001492;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001492;transcript_name=CHM13_chrY_T0001492;gene_name=HSFY2;ID=exon:CHM13_chrY_T0001492:1;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19644207	19674797	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=CHM13_chrY_T0001492;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001492;transcript_name=CHM13_chrY_T0001492;gene_name=HSFY2;ID=intron:CHM13_chrY_T0001492:1;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19674798	19674952	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=CHM13_chrY_T0001492;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001492;transcript_name=CHM13_chrY_T0001492;gene_name=HSFY2;ID=exon:CHM13_chrY_T0001492:2;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19674953	19675999	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=CHM13_chrY_T0001492;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001492;transcript_name=CHM13_chrY_T0001492;gene_name=HSFY2;ID=intron:CHM13_chrY_T0001492:2;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19676000	19676086	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=CHM13_chrY_T0001492;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001492;transcript_name=CHM13_chrY_T0001492;gene_name=HSFY2;ID=exon:CHM13_chrY_T0001492:3;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19676087	19676647	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=CHM13_chrY_T0001492;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001492;transcript_name=CHM13_chrY_T0001492;gene_name=HSFY2;ID=intron:CHM13_chrY_T0001492:3;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19676648	19676757	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=CHM13_chrY_T0001492;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001492;transcript_name=CHM13_chrY_T0001492;gene_name=HSFY2;ID=exon:CHM13_chrY_T0001492:4;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19676758	19679570	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=CHM13_chrY_T0001492;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001492;transcript_name=CHM13_chrY_T0001492;gene_name=HSFY2;ID=intron:CHM13_chrY_T0001492:4;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19679571	19680180	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1,ENST00000491902.1;transcript_id=CHM13_chrY_T0001492;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001492;transcript_name=CHM13_chrY_T0001492;gene_name=HSFY2;ID=exon:CHM13_chrY_T0001492:5;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19675388	19680151	100	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=CHM13_chrY_T0001494;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_G0000518;transcript_name=CHM13_chrY_T0001494;gene_name=HSFY2;ID=CHM13_chrY_T0001494;Name=HSFY2
CHM13_chrY	CAT	exon	19675388	19676086	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=CHM13_chrY_T0001494;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001494;transcript_name=CHM13_chrY_T0001494;gene_name=HSFY2;ID=exon:CHM13_chrY_T0001494:0;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19676065	19676086	.	-	1	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=CHM13_chrY_T0001494;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001494;transcript_name=CHM13_chrY_T0001494;gene_name=HSFY2;ID=CDS:CHM13_chrY_T0001494:0;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	19676065	19676067	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=CHM13_chrY_T0001494;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001494;transcript_name=CHM13_chrY_T0001494;gene_name=HSFY2;ID=stop_codon:CHM13_chrY_T0001494;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19676087	19676647	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=CHM13_chrY_T0001494;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001494;transcript_name=CHM13_chrY_T0001494;gene_name=HSFY2;ID=intron:CHM13_chrY_T0001494:0;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19676648	19676757	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=CHM13_chrY_T0001494;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001494;transcript_name=CHM13_chrY_T0001494;gene_name=HSFY2;ID=exon:CHM13_chrY_T0001494:1;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19676648	19676757	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=CHM13_chrY_T0001494;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001494;transcript_name=CHM13_chrY_T0001494;gene_name=HSFY2;ID=CDS:CHM13_chrY_T0001494:1;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19676758	19679570	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=CHM13_chrY_T0001494;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001494;transcript_name=CHM13_chrY_T0001494;gene_name=HSFY2;ID=intron:CHM13_chrY_T0001494:1;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19679571	19680151	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=CHM13_chrY_T0001494;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001494;transcript_name=CHM13_chrY_T0001494;gene_name=HSFY2;ID=exon:CHM13_chrY_T0001494:2;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19679571	19680083	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=CHM13_chrY_T0001494;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001494;transcript_name=CHM13_chrY_T0001494;gene_name=HSFY2;ID=CDS:CHM13_chrY_T0001494:2;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	19680081	19680083	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1,ENST00000382852.1;transcript_id=CHM13_chrY_T0001494;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001494;transcript_name=CHM13_chrY_T0001494;gene_name=HSFY2;ID=start_codon:CHM13_chrY_T0001494;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19678279	19680200	100	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=CHM13_chrY_T0001495;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_G0000518;transcript_name=CHM13_chrY_T0001495;gene_name=HSFY2;ID=CHM13_chrY_T0001495;Name=HSFY2
CHM13_chrY	CAT	exon	19678279	19679092	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=CHM13_chrY_T0001495;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001495;transcript_name=CHM13_chrY_T0001495;gene_name=HSFY2;ID=exon:CHM13_chrY_T0001495:0;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19678400	19679092	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=CHM13_chrY_T0001495;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001495;transcript_name=CHM13_chrY_T0001495;gene_name=HSFY2;ID=CDS:CHM13_chrY_T0001495:0;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	19678400	19678402	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=CHM13_chrY_T0001495;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001495;transcript_name=CHM13_chrY_T0001495;gene_name=HSFY2;ID=stop_codon:CHM13_chrY_T0001495;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19679093	19679570	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=CHM13_chrY_T0001495;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001495;transcript_name=CHM13_chrY_T0001495;gene_name=HSFY2;ID=intron:CHM13_chrY_T0001495:0;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19679571	19680200	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=CHM13_chrY_T0001495;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001495;transcript_name=CHM13_chrY_T0001495;gene_name=HSFY2;ID=exon:CHM13_chrY_T0001495:1;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	19679571	19680083	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=CHM13_chrY_T0001495;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001495;transcript_name=CHM13_chrY_T0001495;gene_name=HSFY2;ID=CDS:CHM13_chrY_T0001495:1;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	19680081	19680083	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3,ENST00000304790.3;transcript_id=CHM13_chrY_T0001495;gene_id=CHM13_chrY_G0000518;Parent=CHM13_chrY_T0001495;transcript_name=CHM13_chrY_T0001495;gene_name=HSFY2;ID=start_codon:CHM13_chrY_T0001495;Name=HSFY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19648319	19648462	.	-	.	source_gene_common_name=GPM6BP2;source_gene=ENSG00000236429.1;alternative_source_transcripts=ENST00000432046.1,ENST00000432046.1;gene_id=CHM13_chrY_G0000519;gene_biotype=unprocessed_pseudogene;gene_name=GPM6BP2;gene_sources=liftoff;ID=CHM13_chrY_G0000519;Name=GPM6BP2
CHM13_chrY	CAT	transcript	19648319	19648462	1000	-	.	source_transcript=ENST00000432046.1;source_transcript_name=GPM6BP2-201;source_gene=ENSG00000236429.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236429.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432046.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP2;alternative_source_transcripts=ENST00000432046.1,ENST00000432046.1;transcript_id=CHM13_chrY_T0001493;gene_id=CHM13_chrY_G0000519;Parent=CHM13_chrY_G0000519;transcript_name=CHM13_chrY_T0001493;gene_name=GPM6BP2;ID=CHM13_chrY_T0001493;Name=GPM6BP2
CHM13_chrY	CAT	exon	19648319	19648462	.	-	.	source_transcript=ENST00000432046.1;source_transcript_name=GPM6BP2-201;source_gene=ENSG00000236429.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236429.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432046.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP2;alternative_source_transcripts=ENST00000432046.1,ENST00000432046.1;transcript_id=CHM13_chrY_T0001493;gene_id=CHM13_chrY_G0000519;Parent=CHM13_chrY_T0001493;transcript_name=CHM13_chrY_T0001493;gene_name=GPM6BP2;ID=exon:CHM13_chrY_T0001493:0;Name=GPM6BP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19682744	19685892	.	-	.	source_gene_common_name=USP9YP1;source_gene=ENSG00000250951.1;gene_id=CHM13_chrY_G0000520;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP1;gene_sources=liftoff;ID=CHM13_chrY_G0000520;Name=USP9YP1
CHM13_chrY	CAT	transcript	19682744	19685892	1000	-	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;transcript_id=CHM13_chrY_T0001496;gene_id=CHM13_chrY_G0000520;Parent=CHM13_chrY_G0000520;transcript_name=CHM13_chrY_T0001496;gene_name=USP9YP1;ID=CHM13_chrY_T0001496;Name=USP9YP1
CHM13_chrY	CAT	exon	19682744	19682868	.	-	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;transcript_id=CHM13_chrY_T0001496;gene_id=CHM13_chrY_G0000520;Parent=CHM13_chrY_T0001496;transcript_name=CHM13_chrY_T0001496;gene_name=USP9YP1;ID=exon:CHM13_chrY_T0001496:0;Name=USP9YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19682869	19683279	.	-	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;transcript_id=CHM13_chrY_T0001496;gene_id=CHM13_chrY_G0000520;Parent=CHM13_chrY_T0001496;transcript_name=CHM13_chrY_T0001496;gene_name=USP9YP1;ID=intron:CHM13_chrY_T0001496:0;Name=USP9YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19683280	19684026	.	-	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;transcript_id=CHM13_chrY_T0001496;gene_id=CHM13_chrY_G0000520;Parent=CHM13_chrY_T0001496;transcript_name=CHM13_chrY_T0001496;gene_name=USP9YP1;ID=exon:CHM13_chrY_T0001496:1;Name=USP9YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19684027	19685762	.	-	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;transcript_id=CHM13_chrY_T0001496;gene_id=CHM13_chrY_G0000520;Parent=CHM13_chrY_T0001496;transcript_name=CHM13_chrY_T0001496;gene_name=USP9YP1;ID=intron:CHM13_chrY_T0001496:1;Name=USP9YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19685763	19685892	.	-	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;transcript_id=CHM13_chrY_T0001496;gene_id=CHM13_chrY_G0000520;Parent=CHM13_chrY_T0001496;transcript_name=CHM13_chrY_T0001496;gene_name=USP9YP1;ID=exon:CHM13_chrY_T0001496:2;Name=USP9YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19694216	19694546	.	+	.	source_gene_common_name=ELOCP14;source_gene=ENSG00000228193.1;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;gene_id=CHM13_chrY_G0000521;gene_biotype=processed_pseudogene;gene_name=ELOCP14;gene_sources=liftoff;ID=CHM13_chrY_G0000521;Name=ELOCP14
CHM13_chrY	CAT	transcript	19694216	19694546	1000	+	.	source_transcript=ENST00000428070.1;source_transcript_name=ELOCP14-201;source_gene=ENSG00000228193.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228193.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428070.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428070.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP14;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;transcript_id=CHM13_chrY_T0001497;gene_id=CHM13_chrY_G0000521;Parent=CHM13_chrY_G0000521;transcript_name=CHM13_chrY_T0001497;gene_name=ELOCP14;ID=CHM13_chrY_T0001497;Name=ELOCP14
CHM13_chrY	CAT	exon	19694216	19694546	.	+	.	source_transcript=ENST00000428070.1;source_transcript_name=ELOCP14-201;source_gene=ENSG00000228193.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228193.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428070.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428070.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP14;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;transcript_id=CHM13_chrY_T0001497;gene_id=CHM13_chrY_G0000521;Parent=CHM13_chrY_T0001497;transcript_name=CHM13_chrY_T0001497;gene_name=ELOCP14;ID=exon:CHM13_chrY_T0001497:0;Name=ELOCP14;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19717805	19718296	.	-	.	source_gene_common_name=XKRYP2;source_gene=ENSG00000230904.1;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;gene_id=CHM13_chrY_G0000522;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP2;gene_sources=liftoff;ID=CHM13_chrY_G0000522;Name=XKRYP2
CHM13_chrY	CAT	transcript	19717805	19718296	1000	-	.	source_transcript=ENST00000432915.1;source_transcript_name=XKRYP2-201;source_gene=ENSG00000230904.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230904.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432915.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432915.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP2;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;transcript_id=CHM13_chrY_T0001498;gene_id=CHM13_chrY_G0000522;Parent=CHM13_chrY_G0000522;transcript_name=CHM13_chrY_T0001498;gene_name=XKRYP2;ID=CHM13_chrY_T0001498;Name=XKRYP2
CHM13_chrY	CAT	exon	19717805	19718296	.	-	.	source_transcript=ENST00000432915.1;source_transcript_name=XKRYP2-201;source_gene=ENSG00000230904.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230904.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432915.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432915.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP2;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;transcript_id=CHM13_chrY_T0001498;gene_id=CHM13_chrY_G0000522;Parent=CHM13_chrY_T0001498;transcript_name=CHM13_chrY_T0001498;gene_name=XKRYP2;ID=exon:CHM13_chrY_T0001498:0;Name=XKRYP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19732575	19735958	.	+	.	source_gene_common_name=USP9YP10;source_gene=ENSG00000238135.1;gene_id=CHM13_chrY_G0000523;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP10;gene_sources=liftoff,transMap,transMap_pairwise;ID=CHM13_chrY_G0000523;Name=USP9YP10
CHM13_chrY	CAT	transcript	19732575	19735958	1000	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001499;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_G0000523;transcript_name=CHM13_chrY_T0001499;gene_name=USP9YP10;ID=CHM13_chrY_T0001499;Name=USP9YP10
CHM13_chrY	CAT	exon	19732575	19732795	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001499;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001499;transcript_name=CHM13_chrY_T0001499;gene_name=USP9YP10;ID=exon:CHM13_chrY_T0001499:0;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19732796	19733564	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001499;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001499;transcript_name=CHM13_chrY_T0001499;gene_name=USP9YP10;ID=intron:CHM13_chrY_T0001499:0;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19733565	19733864	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001499;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001499;transcript_name=CHM13_chrY_T0001499;gene_name=USP9YP10;ID=exon:CHM13_chrY_T0001499:1;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19733865	19735769	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001499;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001499;transcript_name=CHM13_chrY_T0001499;gene_name=USP9YP10;ID=intron:CHM13_chrY_T0001499:1;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19735770	19735958	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001499;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001499;transcript_name=CHM13_chrY_T0001499;gene_name=USP9YP10;ID=exon:CHM13_chrY_T0001499:2;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19732575	19735958	1000	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001500;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_G0000523;transcript_name=CHM13_chrY_T0001500;gene_name=USP9YP10;ID=CHM13_chrY_T0001500;Name=USP9YP10
CHM13_chrY	CAT	exon	19732575	19732795	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001500;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001500;transcript_name=CHM13_chrY_T0001500;gene_name=USP9YP10;ID=exon:CHM13_chrY_T0001500:0;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19732796	19733564	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001500;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001500;transcript_name=CHM13_chrY_T0001500;gene_name=USP9YP10;ID=intron:CHM13_chrY_T0001500:0;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19733565	19733686	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001500;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001500;transcript_name=CHM13_chrY_T0001500;gene_name=USP9YP10;ID=exon:CHM13_chrY_T0001500:1;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19733687	19733770	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001500;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001500;transcript_name=CHM13_chrY_T0001500;gene_name=USP9YP10;ID=intron:CHM13_chrY_T0001500:1;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19733771	19733864	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001500;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001500;transcript_name=CHM13_chrY_T0001500;gene_name=USP9YP10;ID=exon:CHM13_chrY_T0001500:2;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19733865	19735769	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001500;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001500;transcript_name=CHM13_chrY_T0001500;gene_name=USP9YP10;ID=intron:CHM13_chrY_T0001500:2;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19735770	19735958	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001500;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001500;transcript_name=CHM13_chrY_T0001500;gene_name=USP9YP10;ID=exon:CHM13_chrY_T0001500:3;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19732575	19735958	1000	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001501;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_G0000523;transcript_name=CHM13_chrY_T0001501;gene_name=USP9YP10;ID=CHM13_chrY_T0001501;Name=USP9YP10
CHM13_chrY	CAT	exon	19732575	19732795	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001501;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001501;transcript_name=CHM13_chrY_T0001501;gene_name=USP9YP10;ID=exon:CHM13_chrY_T0001501:0;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19732796	19733564	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001501;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001501;transcript_name=CHM13_chrY_T0001501;gene_name=USP9YP10;ID=intron:CHM13_chrY_T0001501:0;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19733565	19733688	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001501;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001501;transcript_name=CHM13_chrY_T0001501;gene_name=USP9YP10;ID=exon:CHM13_chrY_T0001501:1;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19733689	19733770	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001501;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001501;transcript_name=CHM13_chrY_T0001501;gene_name=USP9YP10;ID=intron:CHM13_chrY_T0001501:1;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19733771	19733864	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001501;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001501;transcript_name=CHM13_chrY_T0001501;gene_name=USP9YP10;ID=exon:CHM13_chrY_T0001501:2;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19733865	19735769	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001501;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001501;transcript_name=CHM13_chrY_T0001501;gene_name=USP9YP10;ID=intron:CHM13_chrY_T0001501:2;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19735770	19735958	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=CHM13_chrY_T0001501;gene_id=CHM13_chrY_G0000523;Parent=CHM13_chrY_T0001501;transcript_name=CHM13_chrY_T0001501;gene_name=USP9YP10;ID=exon:CHM13_chrY_T0001501:3;Name=USP9YP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19739473	19745783	.	-	.	source_gene_common_name=USP9YP28;source_gene=ENSG00000224151.1;gene_id=CHM13_chrY_G0000524;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=USP9YP28;gene_sources=liftoff;ID=CHM13_chrY_G0000524;Name=USP9YP28
CHM13_chrY	CAT	transcript	19739473	19745783	1000	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=CHM13_chrY_T0001502;gene_id=CHM13_chrY_G0000524;Parent=CHM13_chrY_G0000524;transcript_name=CHM13_chrY_T0001502;gene_name=USP9YP28;ID=CHM13_chrY_T0001502;Name=USP9YP28
CHM13_chrY	CAT	exon	19739473	19739568	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=CHM13_chrY_T0001502;gene_id=CHM13_chrY_G0000524;Parent=CHM13_chrY_T0001502;transcript_name=CHM13_chrY_T0001502;gene_name=USP9YP28;ID=exon:CHM13_chrY_T0001502:0;Name=USP9YP28;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19739569	19739945	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=CHM13_chrY_T0001502;gene_id=CHM13_chrY_G0000524;Parent=CHM13_chrY_T0001502;transcript_name=CHM13_chrY_T0001502;gene_name=USP9YP28;ID=intron:CHM13_chrY_T0001502:0;Name=USP9YP28;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19739946	19740120	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=CHM13_chrY_T0001502;gene_id=CHM13_chrY_G0000524;Parent=CHM13_chrY_T0001502;transcript_name=CHM13_chrY_T0001502;gene_name=USP9YP28;ID=exon:CHM13_chrY_T0001502:1;Name=USP9YP28;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19740121	19740361	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=CHM13_chrY_T0001502;gene_id=CHM13_chrY_G0000524;Parent=CHM13_chrY_T0001502;transcript_name=CHM13_chrY_T0001502;gene_name=USP9YP28;ID=intron:CHM13_chrY_T0001502:1;Name=USP9YP28;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19740362	19740390	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=CHM13_chrY_T0001502;gene_id=CHM13_chrY_G0000524;Parent=CHM13_chrY_T0001502;transcript_name=CHM13_chrY_T0001502;gene_name=USP9YP28;ID=exon:CHM13_chrY_T0001502:2;Name=USP9YP28;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19740391	19740522	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=CHM13_chrY_T0001502;gene_id=CHM13_chrY_G0000524;Parent=CHM13_chrY_T0001502;transcript_name=CHM13_chrY_T0001502;gene_name=USP9YP28;ID=intron:CHM13_chrY_T0001502:2;Name=USP9YP28;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19740523	19740679	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=CHM13_chrY_T0001502;gene_id=CHM13_chrY_G0000524;Parent=CHM13_chrY_T0001502;transcript_name=CHM13_chrY_T0001502;gene_name=USP9YP28;ID=exon:CHM13_chrY_T0001502:3;Name=USP9YP28;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19740680	19745651	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=CHM13_chrY_T0001502;gene_id=CHM13_chrY_G0000524;Parent=CHM13_chrY_T0001502;transcript_name=CHM13_chrY_T0001502;gene_name=USP9YP28;ID=intron:CHM13_chrY_T0001502:3;Name=USP9YP28;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19745652	19745783	.	-	.	source_transcript=ENST00000435142.1;source_transcript_name=USP9YP28-201;source_gene=ENSG00000224151.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224151.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000435142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435142.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP28;transcript_id=CHM13_chrY_T0001502;gene_id=CHM13_chrY_G0000524;Parent=CHM13_chrY_T0001502;transcript_name=CHM13_chrY_T0001502;gene_name=USP9YP28;ID=exon:CHM13_chrY_T0001502:4;Name=USP9YP28;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19740201	19740362	.	-	.	source_gene_common_name=RNU1-41P;source_gene=ENSG00000251970.1;gene_id=CHM13_chrY_G0000525;gene_biotype=snRNA;gene_name=RNU1-41P;gene_sources=liftoff;ID=CHM13_chrY_G0000525;Name=RNU1-41P
CHM13_chrY	CAT	transcript	19740201	19740362	1000	-	.	source_transcript=ENST00000516161.1;source_transcript_name=RNU1-41P-201;source_gene=ENSG00000251970.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251970.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516161.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-41P;transcript_id=CHM13_chrY_T0001503;gene_id=CHM13_chrY_G0000525;Parent=CHM13_chrY_G0000525;transcript_name=CHM13_chrY_T0001503;gene_name=RNU1-41P;ID=CHM13_chrY_T0001503;Name=RNU1-41P
CHM13_chrY	CAT	exon	19740201	19740362	.	-	.	source_transcript=ENST00000516161.1;source_transcript_name=RNU1-41P-201;source_gene=ENSG00000251970.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251970.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-41P;transcript_id=CHM13_chrY_T0001503;gene_id=CHM13_chrY_G0000525;Parent=CHM13_chrY_T0001503;transcript_name=CHM13_chrY_T0001503;gene_name=RNU1-41P;ID=exon:CHM13_chrY_T0001503:0;Name=RNU1-41P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19754749	19773767	.	+	.	source_gene_common_name=OFD1P7Y;source_gene=ENSG00000238088.1;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;gene_id=CHM13_chrY_G0000526;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P7Y;gene_sources=liftoff;ID=CHM13_chrY_G0000526;Name=OFD1P7Y
CHM13_chrY	CAT	transcript	19754749	19773767	1000	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_G0000526;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=CHM13_chrY_T0001504;Name=OFD1P7Y
CHM13_chrY	CAT	exon	19754749	19754820	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=exon:CHM13_chrY_T0001504:0;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19754821	19756013	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=intron:CHM13_chrY_T0001504:0;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19756014	19756214	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=exon:CHM13_chrY_T0001504:1;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19756215	19758435	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=intron:CHM13_chrY_T0001504:1;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19758436	19758500	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=exon:CHM13_chrY_T0001504:2;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19758501	19758587	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=intron:CHM13_chrY_T0001504:2;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19758588	19758617	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=exon:CHM13_chrY_T0001504:3;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19758618	19762835	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=intron:CHM13_chrY_T0001504:3;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19762836	19762972	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=exon:CHM13_chrY_T0001504:4;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19762973	19763320	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=intron:CHM13_chrY_T0001504:4;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19763321	19763436	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=exon:CHM13_chrY_T0001504:5;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19763437	19766546	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=intron:CHM13_chrY_T0001504:5;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19766547	19766653	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=exon:CHM13_chrY_T0001504:6;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19766654	19768821	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=intron:CHM13_chrY_T0001504:6;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19768822	19768939	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=exon:CHM13_chrY_T0001504:7;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19768940	19770720	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=intron:CHM13_chrY_T0001504:7;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19770721	19770788	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=exon:CHM13_chrY_T0001504:8;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19770789	19771900	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=intron:CHM13_chrY_T0001504:8;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19771901	19772000	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=exon:CHM13_chrY_T0001504:9;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19772001	19773626	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=intron:CHM13_chrY_T0001504:9;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19773627	19773767	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=CHM13_chrY_T0001504;gene_id=CHM13_chrY_G0000526;Parent=CHM13_chrY_T0001504;transcript_name=CHM13_chrY_T0001504;gene_name=OFD1P7Y;ID=exon:CHM13_chrY_T0001504:10;Name=OFD1P7Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19778589	19778759	.	+	.	source_gene_common_name=MTCYBP2;source_gene=ENSG00000217179.1;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;gene_id=CHM13_chrY_G0000527;gene_biotype=processed_pseudogene;gene_name=MTCYBP2;gene_sources=liftoff;ID=CHM13_chrY_G0000527;Name=MTCYBP2
CHM13_chrY	CAT	transcript	19778589	19778759	1000	+	.	source_transcript=ENST00000407745.1;source_transcript_name=MTCYBP2-201;source_gene=ENSG00000217179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000407745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000407745.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP2;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;transcript_id=CHM13_chrY_T0001505;gene_id=CHM13_chrY_G0000527;Parent=CHM13_chrY_G0000527;transcript_name=CHM13_chrY_T0001505;gene_name=MTCYBP2;ID=CHM13_chrY_T0001505;Name=MTCYBP2
CHM13_chrY	CAT	exon	19778589	19778759	.	+	.	source_transcript=ENST00000407745.1;source_transcript_name=MTCYBP2-201;source_gene=ENSG00000217179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000407745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000407745.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP2;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;transcript_id=CHM13_chrY_T0001505;gene_id=CHM13_chrY_G0000527;Parent=CHM13_chrY_T0001505;transcript_name=CHM13_chrY_T0001505;gene_name=MTCYBP2;ID=exon:CHM13_chrY_T0001505:0;Name=MTCYBP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19891678	19892901	.	+	.	source_gene_common_name=ZNF839P1;source_gene=ENSG00000217896.2;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;gene_id=CHM13_chrY_G0000528;gene_biotype=processed_pseudogene;gene_name=ZNF839P1;gene_sources=liftoff;ID=CHM13_chrY_G0000528;Name=ZNF839P1
CHM13_chrY	CAT	transcript	19891678	19892901	1000	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=CHM13_chrY_T0001506;gene_id=CHM13_chrY_G0000528;Parent=CHM13_chrY_G0000528;transcript_name=CHM13_chrY_T0001506;gene_name=ZNF839P1;ID=CHM13_chrY_T0001506;Name=ZNF839P1
CHM13_chrY	CAT	exon	19891678	19892357	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=CHM13_chrY_T0001506;gene_id=CHM13_chrY_G0000528;Parent=CHM13_chrY_T0001506;transcript_name=CHM13_chrY_T0001506;gene_name=ZNF839P1;ID=exon:CHM13_chrY_T0001506:0;Name=ZNF839P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19892358	19892720	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=CHM13_chrY_T0001506;gene_id=CHM13_chrY_G0000528;Parent=CHM13_chrY_T0001506;transcript_name=CHM13_chrY_T0001506;gene_name=ZNF839P1;ID=intron:CHM13_chrY_T0001506:0;Name=ZNF839P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19892721	19892901	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=CHM13_chrY_T0001506;gene_id=CHM13_chrY_G0000528;Parent=CHM13_chrY_T0001506;transcript_name=CHM13_chrY_T0001506;gene_name=ZNF839P1;ID=exon:CHM13_chrY_T0001506:1;Name=ZNF839P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19898971	19899213	.	-	.	source_gene_common_name=CD24P4;source_gene=ENSG00000185275.6;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;gene_id=CHM13_chrY_G0000529;gene_biotype=processed_pseudogene;gene_name=CD24P4;gene_sources=liftoff;ID=CHM13_chrY_G0000529;Name=CD24P4
CHM13_chrY	CAT	transcript	19898971	19899213	1000	-	.	source_transcript=ENST00000382840.3;source_transcript_name=CD24P4-201;source_gene=ENSG00000185275.6;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000185275.6;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000382840.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382840.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD24P4;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;transcript_id=CHM13_chrY_T0001507;gene_id=CHM13_chrY_G0000529;Parent=CHM13_chrY_G0000529;transcript_name=CHM13_chrY_T0001507;gene_name=CD24P4;ID=CHM13_chrY_T0001507;Name=CD24P4
CHM13_chrY	CAT	exon	19898971	19899213	.	-	.	source_transcript=ENST00000382840.3;source_transcript_name=CD24P4-201;source_gene=ENSG00000185275.6;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000185275.6;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000382840.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382840.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD24P4;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;transcript_id=CHM13_chrY_T0001507;gene_id=CHM13_chrY_G0000529;Parent=CHM13_chrY_T0001507;transcript_name=CHM13_chrY_T0001507;gene_name=CD24P4;ID=exon:CHM13_chrY_T0001507:0;Name=CD24P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19925487	19925591	.	-	.	source_gene_common_name=RNU6-255P;source_gene=ENSG00000252766.1;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;gene_id=CHM13_chrY_G0000530;gene_biotype=snRNA;gene_name=RNU6-255P;gene_sources=liftoff;ID=CHM13_chrY_G0000530;Name=RNU6-255P
CHM13_chrY	CAT	transcript	19925487	19925591	1000	-	.	source_transcript=ENST00000516957.1;source_transcript_name=RNU6-255P-201;source_gene=ENSG00000252766.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252766.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516957.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-255P;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;transcript_id=CHM13_chrY_T0001508;gene_id=CHM13_chrY_G0000530;Parent=CHM13_chrY_G0000530;transcript_name=CHM13_chrY_T0001508;gene_name=RNU6-255P;ID=CHM13_chrY_T0001508;Name=RNU6-255P
CHM13_chrY	CAT	exon	19925487	19925591	.	-	.	source_transcript=ENST00000516957.1;source_transcript_name=RNU6-255P-201;source_gene=ENSG00000252766.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252766.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516957.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-255P;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;transcript_id=CHM13_chrY_T0001508;gene_id=CHM13_chrY_G0000530;Parent=CHM13_chrY_T0001508;transcript_name=CHM13_chrY_T0001508;gene_name=RNU6-255P;ID=exon:CHM13_chrY_T0001508:0;Name=RNU6-255P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	19982636	19993563	.	+	.	source_gene_common_name=ENSG00000310485;source_gene=ENSG00000310485.1;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;gene_id=CHM13_chrY_G0000531;gene_biotype=lncRNA;gene_name=ENSG00000310485;gene_sources=liftoff;ID=CHM13_chrY_G0000531;Name=ENSG00000310485
CHM13_chrY	CAT	transcript	19982636	19993563	1000	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=CHM13_chrY_T0001509;gene_id=CHM13_chrY_G0000531;Parent=CHM13_chrY_G0000531;transcript_name=CHM13_chrY_T0001509;gene_name=ENSG00000310485;ID=CHM13_chrY_T0001509;Name=ENSG00000310485
CHM13_chrY	CAT	exon	19982636	19982759	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=CHM13_chrY_T0001509;gene_id=CHM13_chrY_G0000531;Parent=CHM13_chrY_T0001509;transcript_name=CHM13_chrY_T0001509;gene_name=ENSG00000310485;ID=exon:CHM13_chrY_T0001509:0;Name=ENSG00000310485;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19982760	19993001	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=CHM13_chrY_T0001509;gene_id=CHM13_chrY_G0000531;Parent=CHM13_chrY_T0001509;transcript_name=CHM13_chrY_T0001509;gene_name=ENSG00000310485;ID=intron:CHM13_chrY_T0001509:0;Name=ENSG00000310485;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19993002	19993563	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=CHM13_chrY_T0001509;gene_id=CHM13_chrY_G0000531;Parent=CHM13_chrY_T0001509;transcript_name=CHM13_chrY_T0001509;gene_name=ENSG00000310485;ID=exon:CHM13_chrY_T0001509:1;Name=ENSG00000310485;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	19982683	19983019	1000	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=CHM13_chrY_T0001510;gene_id=CHM13_chrY_G0000531;Parent=CHM13_chrY_G0000531;transcript_name=CHM13_chrY_T0001510;gene_name=ENSG00000310485;ID=CHM13_chrY_T0001510;Name=ENSG00000310485
CHM13_chrY	CAT	exon	19982683	19982759	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=CHM13_chrY_T0001510;gene_id=CHM13_chrY_G0000531;Parent=CHM13_chrY_T0001510;transcript_name=CHM13_chrY_T0001510;gene_name=ENSG00000310485;ID=exon:CHM13_chrY_T0001510:0;Name=ENSG00000310485;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	19982760	19982847	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=CHM13_chrY_T0001510;gene_id=CHM13_chrY_G0000531;Parent=CHM13_chrY_T0001510;transcript_name=CHM13_chrY_T0001510;gene_name=ENSG00000310485;ID=intron:CHM13_chrY_T0001510:0;Name=ENSG00000310485;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	19982848	19983019	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=CHM13_chrY_T0001510;gene_id=CHM13_chrY_G0000531;Parent=CHM13_chrY_T0001510;transcript_name=CHM13_chrY_T0001510;gene_name=ENSG00000310485;ID=exon:CHM13_chrY_T0001510:1;Name=ENSG00000310485;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20160465	20167380	.	-	.	source_gene_common_name=ENSG00000274282;source_gene=ENSG00000274282.1;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;gene_id=CHM13_chrY_G0000532;gene_biotype=processed_pseudogene;gene_name=ENSG00000274282;gene_sources=liftoff;ID=CHM13_chrY_G0000532;Name=ENSG00000274282
CHM13_chrY	CAT	transcript	20160465	20167380	1000	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=CHM13_chrY_T0001511;gene_id=CHM13_chrY_G0000532;Parent=CHM13_chrY_G0000532;transcript_name=CHM13_chrY_T0001511;gene_name=ENSG00000274282;ID=CHM13_chrY_T0001511;Name=ENSG00000274282
CHM13_chrY	CAT	exon	20160465	20160957	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=CHM13_chrY_T0001511;gene_id=CHM13_chrY_G0000532;Parent=CHM13_chrY_T0001511;transcript_name=CHM13_chrY_T0001511;gene_name=ENSG00000274282;ID=exon:CHM13_chrY_T0001511:0;Name=ENSG00000274282;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20160958	20167031	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=CHM13_chrY_T0001511;gene_id=CHM13_chrY_G0000532;Parent=CHM13_chrY_T0001511;transcript_name=CHM13_chrY_T0001511;gene_name=ENSG00000274282;ID=intron:CHM13_chrY_T0001511:0;Name=ENSG00000274282;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20167032	20167380	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=CHM13_chrY_T0001511;gene_id=CHM13_chrY_G0000532;Parent=CHM13_chrY_T0001511;transcript_name=CHM13_chrY_T0001511;gene_name=ENSG00000274282;ID=exon:CHM13_chrY_T0001511:1;Name=ENSG00000274282;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20234108	20235112	.	+	.	source_gene_common_name=GAPDHP19;source_gene=ENSG00000234529.2;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;gene_id=CHM13_chrY_G0000533;gene_biotype=processed_pseudogene;gene_name=GAPDHP19;gene_sources=liftoff;ID=CHM13_chrY_G0000533;Name=GAPDHP19
CHM13_chrY	CAT	transcript	20234108	20235112	1000	+	.	source_transcript=ENST00000431768.2;source_transcript_name=GAPDHP19-201;source_gene=ENSG00000234529.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234529.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431768.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431768.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP19;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;transcript_id=CHM13_chrY_T0001512;gene_id=CHM13_chrY_G0000533;Parent=CHM13_chrY_G0000533;transcript_name=CHM13_chrY_T0001512;gene_name=GAPDHP19;ID=CHM13_chrY_T0001512;Name=GAPDHP19
CHM13_chrY	CAT	exon	20234108	20235112	.	+	.	source_transcript=ENST00000431768.2;source_transcript_name=GAPDHP19-201;source_gene=ENSG00000234529.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234529.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431768.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431768.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP19;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;transcript_id=CHM13_chrY_T0001512;gene_id=CHM13_chrY_G0000533;Parent=CHM13_chrY_T0001512;transcript_name=CHM13_chrY_T0001512;gene_name=GAPDHP19;ID=exon:CHM13_chrY_T0001512:0;Name=GAPDHP19;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20362013	20473840	.	-	.	source_gene_common_name=BCORP1;source_gene=ENSG00000291031.2;gene_id=CHM13_chrY_G0000534;gene_biotype=lncRNA;gene_name=BCORP1;gene_sources=liftoff;ID=CHM13_chrY_G0000534;Name=BCORP1
CHM13_chrY	CAT	transcript	20362013	20409740	1000	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=CHM13_chrY_T0001513;Name=BCORP1
CHM13_chrY	CAT	exon	20362013	20363446	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001513:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20363447	20365490	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001513:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20365491	20365646	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001513:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20365647	20365855	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001513:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20365856	20365933	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001513:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20365934	20371669	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001513:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20371670	20371791	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001513:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20371792	20373019	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001513:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20373020	20373938	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001513:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20373939	20380468	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001513:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20380469	20380708	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001513:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20380709	20381203	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001513:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20381204	20381467	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001513:6;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20381468	20386732	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001513:6;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20386733	20386858	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001513:7;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20386859	20409595	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001513:7;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20409596	20409740	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001513;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001513;transcript_name=CHM13_chrY_T0001513;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001513:8;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20362894	20409700	1000	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=CHM13_chrY_T0001514;Name=BCORP1
CHM13_chrY	CAT	exon	20362894	20363446	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001514:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20363447	20363638	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001514:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20363639	20363699	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001514:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20363700	20365490	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001514:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20365491	20365646	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001514:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20365647	20365855	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001514:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20365856	20365933	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001514:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20365934	20366525	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001514:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20366526	20366671	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001514:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20366672	20371669	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001514:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20371670	20371791	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001514:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20371792	20373019	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001514:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20373020	20373938	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001514:6;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20373939	20380468	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001514:6;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20380469	20380708	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001514:7;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20380709	20381203	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001514:7;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20381204	20381467	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001514:8;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20381468	20386732	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001514:8;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20386733	20386858	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001514:9;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20386859	20409595	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001514:9;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20409596	20409700	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001514;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001514;transcript_name=CHM13_chrY_T0001514;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001514:10;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20362976	20473652	1000	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=CHM13_chrY_T0001515;Name=BCORP1
CHM13_chrY	CAT	exon	20362976	20363446	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001515:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20363447	20365490	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001515:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20365491	20365646	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001515:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20365647	20365855	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001515:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20365856	20365933	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001515:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20365934	20366525	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001515:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20366526	20366671	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001515:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20366672	20371669	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001515:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20371670	20371791	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001515:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20371792	20373019	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001515:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20373020	20373938	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001515:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20373939	20380468	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001515:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20380469	20380708	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001515:6;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20380709	20381203	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001515:6;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20381204	20381467	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001515:7;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20381468	20386732	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001515:7;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20386733	20386858	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001515:8;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20386859	20473541	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001515:8;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473652	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001515;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001515;transcript_name=CHM13_chrY_T0001515;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001515:9;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20364611	20366671	1000	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001517;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001517;gene_name=BCORP1;ID=CHM13_chrY_T0001517;Name=BCORP1
CHM13_chrY	CAT	exon	20364611	20365646	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001517;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001517;transcript_name=CHM13_chrY_T0001517;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001517:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20365647	20365855	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001517;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001517;transcript_name=CHM13_chrY_T0001517;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001517:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20365856	20365933	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001517;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001517;transcript_name=CHM13_chrY_T0001517;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001517:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20365934	20366525	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001517;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001517;transcript_name=CHM13_chrY_T0001517;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001517:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20366526	20366671	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001517;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001517;transcript_name=CHM13_chrY_T0001517;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001517:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20443607	20473590	1000	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001518;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001518;gene_name=BCORP1;ID=CHM13_chrY_T0001518;Name=BCORP1
CHM13_chrY	CAT	exon	20443607	20443771	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001518;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001518;transcript_name=CHM13_chrY_T0001518;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001518:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20443772	20446154	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001518;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001518;transcript_name=CHM13_chrY_T0001518;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001518:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20446155	20446381	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001518;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001518;transcript_name=CHM13_chrY_T0001518;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001518:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20446382	20464599	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001518;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001518;transcript_name=CHM13_chrY_T0001518;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001518:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001518;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001518;transcript_name=CHM13_chrY_T0001518;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001518:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001518;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001518;transcript_name=CHM13_chrY_T0001518;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001518:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473590	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001518;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001518;transcript_name=CHM13_chrY_T0001518;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001518:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20443608	20473567	1000	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001519;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001519;gene_name=BCORP1;ID=CHM13_chrY_T0001519;Name=BCORP1
CHM13_chrY	CAT	exon	20443608	20443771	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001519;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001519;transcript_name=CHM13_chrY_T0001519;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001519:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20443772	20446154	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001519;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001519;transcript_name=CHM13_chrY_T0001519;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001519:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20446155	20446381	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001519;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001519;transcript_name=CHM13_chrY_T0001519;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001519:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20446382	20446749	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001519;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001519;transcript_name=CHM13_chrY_T0001519;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001519:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20446750	20446861	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001519;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001519;transcript_name=CHM13_chrY_T0001519;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001519:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20446862	20464599	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001519;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001519;transcript_name=CHM13_chrY_T0001519;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001519:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001519;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001519;transcript_name=CHM13_chrY_T0001519;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001519:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001519;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001519;transcript_name=CHM13_chrY_T0001519;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001519:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001519;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001519;transcript_name=CHM13_chrY_T0001519;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001519:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473541	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001519;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001519;transcript_name=CHM13_chrY_T0001519;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001519:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473567	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001519;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001519;transcript_name=CHM13_chrY_T0001519;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001519:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20445996	20473604	1000	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001520;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001520;gene_name=BCORP1;ID=CHM13_chrY_T0001520;Name=BCORP1
CHM13_chrY	CAT	exon	20445996	20446381	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001520;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001520;transcript_name=CHM13_chrY_T0001520;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001520:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20446382	20446749	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001520;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001520;transcript_name=CHM13_chrY_T0001520;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001520:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20446750	20446861	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001520;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001520;transcript_name=CHM13_chrY_T0001520;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001520:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20446862	20464583	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001520;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001520;transcript_name=CHM13_chrY_T0001520;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001520:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001520;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001520;transcript_name=CHM13_chrY_T0001520;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001520:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001520;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001520;transcript_name=CHM13_chrY_T0001520;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001520:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473604	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001520;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001520;transcript_name=CHM13_chrY_T0001520;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001520:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20445999	20473590	1000	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001521;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001521;gene_name=BCORP1;ID=CHM13_chrY_T0001521;Name=BCORP1
CHM13_chrY	CAT	exon	20445999	20446381	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001521;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001521;transcript_name=CHM13_chrY_T0001521;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001521:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20446382	20464599	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001521;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001521;transcript_name=CHM13_chrY_T0001521;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001521:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001521;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001521;transcript_name=CHM13_chrY_T0001521;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001521:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001521;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001521;transcript_name=CHM13_chrY_T0001521;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001521:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473590	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001521;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001521;transcript_name=CHM13_chrY_T0001521;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001521:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20446048	20473569	1000	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001522;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001522;gene_name=BCORP1;ID=CHM13_chrY_T0001522;Name=BCORP1
CHM13_chrY	CAT	exon	20446048	20446381	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001522;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001522;transcript_name=CHM13_chrY_T0001522;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001522:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20446382	20446781	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001522;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001522;transcript_name=CHM13_chrY_T0001522;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001522:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20446782	20446861	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001522;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001522;transcript_name=CHM13_chrY_T0001522;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001522:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20446862	20464599	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001522;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001522;transcript_name=CHM13_chrY_T0001522;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001522:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001522;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001522;transcript_name=CHM13_chrY_T0001522;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001522:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001522;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001522;transcript_name=CHM13_chrY_T0001522;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001522:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473569	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001522;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001522;transcript_name=CHM13_chrY_T0001522;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001522:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20446103	20473586	1000	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001523;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001523;gene_name=BCORP1;ID=CHM13_chrY_T0001523;Name=BCORP1
CHM13_chrY	CAT	exon	20446103	20446381	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001523;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001523;transcript_name=CHM13_chrY_T0001523;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001523:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20446382	20446749	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001523;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001523;transcript_name=CHM13_chrY_T0001523;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001523:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20446750	20446861	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001523;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001523;transcript_name=CHM13_chrY_T0001523;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001523:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20446862	20473541	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001523;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001523;transcript_name=CHM13_chrY_T0001523;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001523:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473586	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001523;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001523;transcript_name=CHM13_chrY_T0001523;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001523:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20446130	20473569	1000	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001524;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001524;gene_name=BCORP1;ID=CHM13_chrY_T0001524;Name=BCORP1
CHM13_chrY	CAT	exon	20446130	20446381	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001524;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001524;transcript_name=CHM13_chrY_T0001524;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001524:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20446382	20464583	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001524;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001524;transcript_name=CHM13_chrY_T0001524;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001524:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001524;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001524;transcript_name=CHM13_chrY_T0001524;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001524:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001524;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001524;transcript_name=CHM13_chrY_T0001524;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001524:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473569	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001524;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001524;transcript_name=CHM13_chrY_T0001524;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001524:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20446470	20473608	1000	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001525;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001525;gene_name=BCORP1;ID=CHM13_chrY_T0001525;Name=BCORP1
CHM13_chrY	CAT	exon	20446470	20446861	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001525;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001525;transcript_name=CHM13_chrY_T0001525;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001525:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20446862	20464599	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001525;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001525;transcript_name=CHM13_chrY_T0001525;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001525:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001525;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001525;transcript_name=CHM13_chrY_T0001525;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001525:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001525;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001525;transcript_name=CHM13_chrY_T0001525;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001525:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473608	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001525;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001525;transcript_name=CHM13_chrY_T0001525;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001525:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20460486	20473611	1000	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001526;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001526;gene_name=BCORP1;ID=CHM13_chrY_T0001526;Name=BCORP1
CHM13_chrY	CAT	exon	20460486	20463372	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001526;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001526;transcript_name=CHM13_chrY_T0001526;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001526:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463373	20463789	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001526;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001526;transcript_name=CHM13_chrY_T0001526;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001526:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001526;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001526;transcript_name=CHM13_chrY_T0001526;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001526:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001526;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001526;transcript_name=CHM13_chrY_T0001526;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001526:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001526;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001526;transcript_name=CHM13_chrY_T0001526;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001526:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001526;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001526;transcript_name=CHM13_chrY_T0001526;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001526:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473611	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001526;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001526;transcript_name=CHM13_chrY_T0001526;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001526:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461436	20473828	1000	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001527;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001527;gene_name=BCORP1;ID=CHM13_chrY_T0001527;Name=BCORP1
CHM13_chrY	CAT	exon	20461436	20462114	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001527;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001527;transcript_name=CHM13_chrY_T0001527;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001527:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001527;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001527;transcript_name=CHM13_chrY_T0001527;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001527:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001527;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001527;transcript_name=CHM13_chrY_T0001527;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001527:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001527;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001527;transcript_name=CHM13_chrY_T0001527;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001527:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001527;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001527;transcript_name=CHM13_chrY_T0001527;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001527:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001527;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001527;transcript_name=CHM13_chrY_T0001527;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001527:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473828	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001527;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001527;transcript_name=CHM13_chrY_T0001527;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001527:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461946	20473815	1000	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001528;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001528;gene_name=BCORP1;ID=CHM13_chrY_T0001528;Name=BCORP1
CHM13_chrY	CAT	exon	20461946	20462114	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001528;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001528;transcript_name=CHM13_chrY_T0001528;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001528:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001528;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001528;transcript_name=CHM13_chrY_T0001528;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001528:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001528;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001528;transcript_name=CHM13_chrY_T0001528;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001528:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001528;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001528;transcript_name=CHM13_chrY_T0001528;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001528:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001528;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001528;transcript_name=CHM13_chrY_T0001528;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001528:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001528;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001528;transcript_name=CHM13_chrY_T0001528;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001528:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473815	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001528;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001528;transcript_name=CHM13_chrY_T0001528;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001528:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461948	20473824	1000	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001529;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001529;gene_name=BCORP1;ID=CHM13_chrY_T0001529;Name=BCORP1
CHM13_chrY	CAT	exon	20461948	20462114	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001529;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001529;transcript_name=CHM13_chrY_T0001529;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001529:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20464583	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001529;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001529;transcript_name=CHM13_chrY_T0001529;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001529:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001529;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001529;transcript_name=CHM13_chrY_T0001529;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001529:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001529;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001529;transcript_name=CHM13_chrY_T0001529;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001529:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473824	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001529;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001529;transcript_name=CHM13_chrY_T0001529;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001529:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461948	20473824	1000	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001530;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001530;gene_name=BCORP1;ID=CHM13_chrY_T0001530;Name=BCORP1
CHM13_chrY	CAT	exon	20461948	20462114	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001530;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001530;transcript_name=CHM13_chrY_T0001530;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001530:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20464599	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001530;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001530;transcript_name=CHM13_chrY_T0001530;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001530:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001530;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001530;transcript_name=CHM13_chrY_T0001530;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001530:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001530;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001530;transcript_name=CHM13_chrY_T0001530;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001530:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473824	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001530;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001530;transcript_name=CHM13_chrY_T0001530;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001530:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473597	1000	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001531;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001531;gene_name=BCORP1;ID=CHM13_chrY_T0001531;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001531;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001531;transcript_name=CHM13_chrY_T0001531;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001531:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20464583	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001531;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001531;transcript_name=CHM13_chrY_T0001531;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001531:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001531;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001531;transcript_name=CHM13_chrY_T0001531;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001531:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473536	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001531;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001531;transcript_name=CHM13_chrY_T0001531;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001531:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473537	20473597	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001531;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001531;transcript_name=CHM13_chrY_T0001531;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001531:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473567	1000	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001532;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001532;gene_name=BCORP1;ID=CHM13_chrY_T0001532;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001532;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001532;transcript_name=CHM13_chrY_T0001532;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001532:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001532;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001532;transcript_name=CHM13_chrY_T0001532;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001532:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001532;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001532;transcript_name=CHM13_chrY_T0001532;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001532:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20464599	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001532;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001532;transcript_name=CHM13_chrY_T0001532;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001532:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001532;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001532;transcript_name=CHM13_chrY_T0001532;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001532:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473536	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001532;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001532;transcript_name=CHM13_chrY_T0001532;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001532:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473537	20473567	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001532;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001532;transcript_name=CHM13_chrY_T0001532;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001532:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473567	1000	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001533;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001533;gene_name=BCORP1;ID=CHM13_chrY_T0001533;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001533;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001533;transcript_name=CHM13_chrY_T0001533;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001533:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462570	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001533;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001533;transcript_name=CHM13_chrY_T0001533;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001533:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462571	20462669	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001533;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001533;transcript_name=CHM13_chrY_T0001533;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001533:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462670	20463789	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001533;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001533;transcript_name=CHM13_chrY_T0001533;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001533:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001533;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001533;transcript_name=CHM13_chrY_T0001533;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001533:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001533;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001533;transcript_name=CHM13_chrY_T0001533;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001533:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001533;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001533;transcript_name=CHM13_chrY_T0001533;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001533:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001533;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001533;transcript_name=CHM13_chrY_T0001533;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001533:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473567	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001533;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001533;transcript_name=CHM13_chrY_T0001533;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001533:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473567	1000	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001534;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001534;gene_name=BCORP1;ID=CHM13_chrY_T0001534;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001534;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001534;transcript_name=CHM13_chrY_T0001534;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001534:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001534;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001534;transcript_name=CHM13_chrY_T0001534;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001534:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001534;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001534;transcript_name=CHM13_chrY_T0001534;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001534:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001534;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001534;transcript_name=CHM13_chrY_T0001534;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001534:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001534;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001534;transcript_name=CHM13_chrY_T0001534;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001534:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001534;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001534;transcript_name=CHM13_chrY_T0001534;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001534:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465984	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001534;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001534;transcript_name=CHM13_chrY_T0001534;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001534:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465985	20473541	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001534;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001534;transcript_name=CHM13_chrY_T0001534;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001534:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473567	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001534;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001534;transcript_name=CHM13_chrY_T0001534;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001534:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473604	1000	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001535;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001535;gene_name=BCORP1;ID=CHM13_chrY_T0001535;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001535;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001535;transcript_name=CHM13_chrY_T0001535;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001535:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001535;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001535;transcript_name=CHM13_chrY_T0001535;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001535:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001535;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001535;transcript_name=CHM13_chrY_T0001535;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001535:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001535;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001535;transcript_name=CHM13_chrY_T0001535;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001535:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001535;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001535;transcript_name=CHM13_chrY_T0001535;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001535:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465173	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001535;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001535;transcript_name=CHM13_chrY_T0001535;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001535:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465174	20465254	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001535;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001535;transcript_name=CHM13_chrY_T0001535;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001535:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465255	20473541	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001535;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001535;transcript_name=CHM13_chrY_T0001535;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001535:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473604	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001535;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001535;transcript_name=CHM13_chrY_T0001535;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001535:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473840	1000	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001536;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001536;gene_name=BCORP1;ID=CHM13_chrY_T0001536;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001536;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001536;transcript_name=CHM13_chrY_T0001536;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001536:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20464583	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001536;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001536;transcript_name=CHM13_chrY_T0001536;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001536:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001536;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001536;transcript_name=CHM13_chrY_T0001536;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001536:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465173	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001536;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001536;transcript_name=CHM13_chrY_T0001536;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001536:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465174	20465254	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001536;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001536;transcript_name=CHM13_chrY_T0001536;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001536:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465255	20473541	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001536;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001536;transcript_name=CHM13_chrY_T0001536;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001536:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473840	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001536;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001536;transcript_name=CHM13_chrY_T0001536;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001536:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473599	1000	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001537;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001537;gene_name=BCORP1;ID=CHM13_chrY_T0001537;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001537;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001537;transcript_name=CHM13_chrY_T0001537;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001537:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001537;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001537;transcript_name=CHM13_chrY_T0001537;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001537:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001537;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001537;transcript_name=CHM13_chrY_T0001537;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001537:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20462615	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001537;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001537;transcript_name=CHM13_chrY_T0001537;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001537:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462616	20462749	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001537;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001537;transcript_name=CHM13_chrY_T0001537;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001537:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462750	20463789	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001537;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001537;transcript_name=CHM13_chrY_T0001537;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001537:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001537;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001537;transcript_name=CHM13_chrY_T0001537;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001537:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001537;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001537;transcript_name=CHM13_chrY_T0001537;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001537:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001537;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001537;transcript_name=CHM13_chrY_T0001537;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001537:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001537;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001537;transcript_name=CHM13_chrY_T0001537;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001537:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473599	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001537;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001537;transcript_name=CHM13_chrY_T0001537;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001537:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473604	1000	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001538;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001538;gene_name=BCORP1;ID=CHM13_chrY_T0001538;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001538;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001538;transcript_name=CHM13_chrY_T0001538;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001538:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001538;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001538;transcript_name=CHM13_chrY_T0001538;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001538:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001538;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001538;transcript_name=CHM13_chrY_T0001538;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001538:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001538;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001538;transcript_name=CHM13_chrY_T0001538;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001538:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001538;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001538;transcript_name=CHM13_chrY_T0001538;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001538:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001538;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001538;transcript_name=CHM13_chrY_T0001538;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001538:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001538;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001538;transcript_name=CHM13_chrY_T0001538;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001538:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473541	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001538;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001538;transcript_name=CHM13_chrY_T0001538;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001538:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473604	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001538;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001538;transcript_name=CHM13_chrY_T0001538;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001538:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473658	1000	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001539;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001539;gene_name=BCORP1;ID=CHM13_chrY_T0001539;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001539;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001539;transcript_name=CHM13_chrY_T0001539;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001539:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001539;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001539;transcript_name=CHM13_chrY_T0001539;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001539:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001539;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001539;transcript_name=CHM13_chrY_T0001539;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001539:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20464599	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001539;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001539;transcript_name=CHM13_chrY_T0001539;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001539:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001539;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001539;transcript_name=CHM13_chrY_T0001539;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001539:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001539;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001539;transcript_name=CHM13_chrY_T0001539;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001539:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473658	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001539;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001539;transcript_name=CHM13_chrY_T0001539;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001539:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473569	1000	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001540;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001540;gene_name=BCORP1;ID=CHM13_chrY_T0001540;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001540;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001540;transcript_name=CHM13_chrY_T0001540;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001540:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001540;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001540;transcript_name=CHM13_chrY_T0001540;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001540:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001540;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001540;transcript_name=CHM13_chrY_T0001540;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001540:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20464599	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001540;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001540;transcript_name=CHM13_chrY_T0001540;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001540:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001540;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001540;transcript_name=CHM13_chrY_T0001540;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001540:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001540;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001540;transcript_name=CHM13_chrY_T0001540;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001540:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001540;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001540;transcript_name=CHM13_chrY_T0001540;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001540:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473541	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001540;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001540;transcript_name=CHM13_chrY_T0001540;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001540:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473569	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001540;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001540;transcript_name=CHM13_chrY_T0001540;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001540:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473569	1000	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001541;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001541;gene_name=BCORP1;ID=CHM13_chrY_T0001541;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001541;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001541;transcript_name=CHM13_chrY_T0001541;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001541:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001541;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001541;transcript_name=CHM13_chrY_T0001541;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001541:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001541;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001541;transcript_name=CHM13_chrY_T0001541;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001541:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001541;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001541;transcript_name=CHM13_chrY_T0001541;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001541:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001541;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001541;transcript_name=CHM13_chrY_T0001541;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001541:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465173	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001541;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001541;transcript_name=CHM13_chrY_T0001541;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001541:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465174	20465254	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001541;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001541;transcript_name=CHM13_chrY_T0001541;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001541:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465255	20465899	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001541;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001541;transcript_name=CHM13_chrY_T0001541;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001541:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001541;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001541;transcript_name=CHM13_chrY_T0001541;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001541:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473541	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001541;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001541;transcript_name=CHM13_chrY_T0001541;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001541:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473569	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001541;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001541;transcript_name=CHM13_chrY_T0001541;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001541:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473599	1000	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001542;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001542;gene_name=BCORP1;ID=CHM13_chrY_T0001542;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001542;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001542;transcript_name=CHM13_chrY_T0001542;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001542:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001542;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001542;transcript_name=CHM13_chrY_T0001542;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001542:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001542;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001542;transcript_name=CHM13_chrY_T0001542;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001542:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20462615	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001542;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001542;transcript_name=CHM13_chrY_T0001542;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001542:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462616	20462744	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001542;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001542;transcript_name=CHM13_chrY_T0001542;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001542:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462745	20463789	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001542;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001542;transcript_name=CHM13_chrY_T0001542;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001542:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001542;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001542;transcript_name=CHM13_chrY_T0001542;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001542:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001542;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001542;transcript_name=CHM13_chrY_T0001542;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001542:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001542;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001542;transcript_name=CHM13_chrY_T0001542;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001542:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001542;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001542;transcript_name=CHM13_chrY_T0001542;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001542:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473599	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001542;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001542;transcript_name=CHM13_chrY_T0001542;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001542:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473776	1000	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001543;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001543;gene_name=BCORP1;ID=CHM13_chrY_T0001543;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001543;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001543;transcript_name=CHM13_chrY_T0001543;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001543:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001543;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001543;transcript_name=CHM13_chrY_T0001543;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001543:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001543;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001543;transcript_name=CHM13_chrY_T0001543;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001543:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001543;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001543;transcript_name=CHM13_chrY_T0001543;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001543:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001543;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001543;transcript_name=CHM13_chrY_T0001543;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001543:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001543;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001543;transcript_name=CHM13_chrY_T0001543;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001543:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001543;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001543;transcript_name=CHM13_chrY_T0001543;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001543:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473541	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001543;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001543;transcript_name=CHM13_chrY_T0001543;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001543:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473776	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001543;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001543;transcript_name=CHM13_chrY_T0001543;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001543:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473589	1000	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001544;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001544;gene_name=BCORP1;ID=CHM13_chrY_T0001544;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001544;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001544;transcript_name=CHM13_chrY_T0001544;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001544:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001544;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001544;transcript_name=CHM13_chrY_T0001544;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001544:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462528	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001544;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001544;transcript_name=CHM13_chrY_T0001544;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001544:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462529	20464583	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001544;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001544;transcript_name=CHM13_chrY_T0001544;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001544:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001544;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001544;transcript_name=CHM13_chrY_T0001544;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001544:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001544;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001544;transcript_name=CHM13_chrY_T0001544;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001544:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473589	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001544;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001544;transcript_name=CHM13_chrY_T0001544;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001544:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473808	1000	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001545;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001545;gene_name=BCORP1;ID=CHM13_chrY_T0001545;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001545;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001545;transcript_name=CHM13_chrY_T0001545;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001545:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20464583	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001545;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001545;transcript_name=CHM13_chrY_T0001545;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001545:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001545;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001545;transcript_name=CHM13_chrY_T0001545;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001545:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001545;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001545;transcript_name=CHM13_chrY_T0001545;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001545:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001545;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001545;transcript_name=CHM13_chrY_T0001545;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001545:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473541	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001545;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001545;transcript_name=CHM13_chrY_T0001545;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001545:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473808	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001545;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001545;transcript_name=CHM13_chrY_T0001545;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001545:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473569	1000	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001546;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001546;gene_name=BCORP1;ID=CHM13_chrY_T0001546;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001546;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001546;transcript_name=CHM13_chrY_T0001546;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001546:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001546;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001546;transcript_name=CHM13_chrY_T0001546;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001546:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001546;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001546;transcript_name=CHM13_chrY_T0001546;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001546:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001546;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001546;transcript_name=CHM13_chrY_T0001546;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001546:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001546;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001546;transcript_name=CHM13_chrY_T0001546;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001546:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001546;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001546;transcript_name=CHM13_chrY_T0001546;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001546:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465984	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001546;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001546;transcript_name=CHM13_chrY_T0001546;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001546:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465985	20473541	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001546;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001546;transcript_name=CHM13_chrY_T0001546;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001546:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473569	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001546;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001546;transcript_name=CHM13_chrY_T0001546;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001546:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473599	1000	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001547;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001547;gene_name=BCORP1;ID=CHM13_chrY_T0001547;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462749	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001547;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001547;transcript_name=CHM13_chrY_T0001547;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001547:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462750	20463789	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001547;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001547;transcript_name=CHM13_chrY_T0001547;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001547:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001547;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001547;transcript_name=CHM13_chrY_T0001547;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001547:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001547;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001547;transcript_name=CHM13_chrY_T0001547;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001547:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001547;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001547;transcript_name=CHM13_chrY_T0001547;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001547:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001547;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001547;transcript_name=CHM13_chrY_T0001547;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001547:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473599	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001547;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001547;transcript_name=CHM13_chrY_T0001547;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001547:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473574	1000	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001548;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001548;gene_name=BCORP1;ID=CHM13_chrY_T0001548;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001548;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001548;transcript_name=CHM13_chrY_T0001548;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001548:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001548;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001548;transcript_name=CHM13_chrY_T0001548;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001548:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001548;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001548;transcript_name=CHM13_chrY_T0001548;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001548:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001548;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001548;transcript_name=CHM13_chrY_T0001548;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001548:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001548;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001548;transcript_name=CHM13_chrY_T0001548;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001548:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465173	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001548;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001548;transcript_name=CHM13_chrY_T0001548;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001548:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465174	20465229	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001548;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001548;transcript_name=CHM13_chrY_T0001548;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001548:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465230	20465899	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001548;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001548;transcript_name=CHM13_chrY_T0001548;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001548:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001548;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001548;transcript_name=CHM13_chrY_T0001548;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001548:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473541	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001548;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001548;transcript_name=CHM13_chrY_T0001548;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001548:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473574	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001548;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001548;transcript_name=CHM13_chrY_T0001548;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001548:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473567	1000	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001549;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001549;gene_name=BCORP1;ID=CHM13_chrY_T0001549;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001549;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001549;transcript_name=CHM13_chrY_T0001549;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001549:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001549;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001549;transcript_name=CHM13_chrY_T0001549;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001549:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001549;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001549;transcript_name=CHM13_chrY_T0001549;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001549:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20464599	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001549;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001549;transcript_name=CHM13_chrY_T0001549;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001549:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001549;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001549;transcript_name=CHM13_chrY_T0001549;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001549:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465173	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001549;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001549;transcript_name=CHM13_chrY_T0001549;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001549:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465174	20465229	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001549;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001549;transcript_name=CHM13_chrY_T0001549;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001549:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465230	20473541	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001549;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001549;transcript_name=CHM13_chrY_T0001549;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001549:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473567	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001549;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001549;transcript_name=CHM13_chrY_T0001549;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001549:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473584	1000	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001550;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001550;gene_name=BCORP1;ID=CHM13_chrY_T0001550;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001550;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001550;transcript_name=CHM13_chrY_T0001550;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001550:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001550;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001550;transcript_name=CHM13_chrY_T0001550;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001550:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001550;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001550;transcript_name=CHM13_chrY_T0001550;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001550:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464434	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001550;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001550;transcript_name=CHM13_chrY_T0001550;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001550:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464435	20464536	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001550;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001550;transcript_name=CHM13_chrY_T0001550;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001550:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464537	20473541	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001550;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001550;transcript_name=CHM13_chrY_T0001550;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001550:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473584	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001550;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001550;transcript_name=CHM13_chrY_T0001550;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001550:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473804	1000	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001551;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001551;gene_name=BCORP1;ID=CHM13_chrY_T0001551;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001551;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001551;transcript_name=CHM13_chrY_T0001551;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001551:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20464599	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001551;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001551;transcript_name=CHM13_chrY_T0001551;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001551:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001551;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001551;transcript_name=CHM13_chrY_T0001551;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001551:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465173	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001551;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001551;transcript_name=CHM13_chrY_T0001551;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001551:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465174	20465254	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001551;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001551;transcript_name=CHM13_chrY_T0001551;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001551:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465255	20473541	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001551;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001551;transcript_name=CHM13_chrY_T0001551;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001551:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473804	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001551;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001551;transcript_name=CHM13_chrY_T0001551;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001551:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473788	1000	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001552;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001552;gene_name=BCORP1;ID=CHM13_chrY_T0001552;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001552;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001552;transcript_name=CHM13_chrY_T0001552;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001552:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001552;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001552;transcript_name=CHM13_chrY_T0001552;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001552:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001552;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001552;transcript_name=CHM13_chrY_T0001552;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001552:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20462615	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001552;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001552;transcript_name=CHM13_chrY_T0001552;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001552:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462616	20462749	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001552;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001552;transcript_name=CHM13_chrY_T0001552;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001552:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462750	20463789	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001552;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001552;transcript_name=CHM13_chrY_T0001552;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001552:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001552;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001552;transcript_name=CHM13_chrY_T0001552;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001552:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001552;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001552;transcript_name=CHM13_chrY_T0001552;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001552:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001552;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001552;transcript_name=CHM13_chrY_T0001552;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001552:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001552;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001552;transcript_name=CHM13_chrY_T0001552;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001552:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473788	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001552;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001552;transcript_name=CHM13_chrY_T0001552;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001552:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473569	1000	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001553;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001553;gene_name=BCORP1;ID=CHM13_chrY_T0001553;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001553;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001553;transcript_name=CHM13_chrY_T0001553;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001553:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001553;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001553;transcript_name=CHM13_chrY_T0001553;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001553:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001553;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001553;transcript_name=CHM13_chrY_T0001553;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001553:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001553;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001553;transcript_name=CHM13_chrY_T0001553;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001553:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001553;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001553;transcript_name=CHM13_chrY_T0001553;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001553:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465173	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001553;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001553;transcript_name=CHM13_chrY_T0001553;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001553:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465174	20465248	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001553;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001553;transcript_name=CHM13_chrY_T0001553;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001553:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465249	20473541	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001553;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001553;transcript_name=CHM13_chrY_T0001553;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001553:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473569	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001553;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001553;transcript_name=CHM13_chrY_T0001553;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001553:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473595	1000	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001554;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001554;gene_name=BCORP1;ID=CHM13_chrY_T0001554;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001554;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001554;transcript_name=CHM13_chrY_T0001554;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001554:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001554;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001554;transcript_name=CHM13_chrY_T0001554;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001554:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462528	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001554;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001554;transcript_name=CHM13_chrY_T0001554;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001554:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462529	20464599	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001554;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001554;transcript_name=CHM13_chrY_T0001554;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001554:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001554;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001554;transcript_name=CHM13_chrY_T0001554;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001554:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001554;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001554;transcript_name=CHM13_chrY_T0001554;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001554:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473595	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001554;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001554;transcript_name=CHM13_chrY_T0001554;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001554:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473575	1000	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001555;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001555;gene_name=BCORP1;ID=CHM13_chrY_T0001555;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001555;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001555;transcript_name=CHM13_chrY_T0001555;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001555:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20464599	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001555;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001555;transcript_name=CHM13_chrY_T0001555;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001555:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001555;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001555;transcript_name=CHM13_chrY_T0001555;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001555:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001555;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001555;transcript_name=CHM13_chrY_T0001555;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001555:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001555;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001555;transcript_name=CHM13_chrY_T0001555;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001555:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473536	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001555;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001555;transcript_name=CHM13_chrY_T0001555;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001555:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473537	20473575	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001555;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001555;transcript_name=CHM13_chrY_T0001555;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001555:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473595	1000	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001556;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001556;gene_name=BCORP1;ID=CHM13_chrY_T0001556;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001556;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001556;transcript_name=CHM13_chrY_T0001556;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001556:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001556;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001556;transcript_name=CHM13_chrY_T0001556;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001556:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001556;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001556;transcript_name=CHM13_chrY_T0001556;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001556:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20464583	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001556;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001556;transcript_name=CHM13_chrY_T0001556;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001556:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001556;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001556;transcript_name=CHM13_chrY_T0001556;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001556:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001556;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001556;transcript_name=CHM13_chrY_T0001556;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001556:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473595	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001556;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001556;transcript_name=CHM13_chrY_T0001556;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001556:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473802	1000	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001557;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001557;gene_name=BCORP1;ID=CHM13_chrY_T0001557;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001557;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001557;transcript_name=CHM13_chrY_T0001557;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001557:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001557;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001557;transcript_name=CHM13_chrY_T0001557;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001557:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001557;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001557;transcript_name=CHM13_chrY_T0001557;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001557:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001557;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001557;transcript_name=CHM13_chrY_T0001557;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001557:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001557;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001557;transcript_name=CHM13_chrY_T0001557;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001557:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465173	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001557;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001557;transcript_name=CHM13_chrY_T0001557;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001557:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465174	20465254	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001557;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001557;transcript_name=CHM13_chrY_T0001557;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001557:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465255	20473541	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001557;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001557;transcript_name=CHM13_chrY_T0001557;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001557:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473802	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001557;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001557;transcript_name=CHM13_chrY_T0001557;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001557:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473781	1000	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001558;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001558;gene_name=BCORP1;ID=CHM13_chrY_T0001558;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001558;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001558;transcript_name=CHM13_chrY_T0001558;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001558:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20473541	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001558;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001558;transcript_name=CHM13_chrY_T0001558;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001558:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473781	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001558;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001558;transcript_name=CHM13_chrY_T0001558;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001558:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473569	1000	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001559;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001559;gene_name=BCORP1;ID=CHM13_chrY_T0001559;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001559;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001559;transcript_name=CHM13_chrY_T0001559;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001559:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001559;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001559;transcript_name=CHM13_chrY_T0001559;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001559:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001559;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001559;transcript_name=CHM13_chrY_T0001559;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001559:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20462615	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001559;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001559;transcript_name=CHM13_chrY_T0001559;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001559:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462616	20462669	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001559;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001559;transcript_name=CHM13_chrY_T0001559;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001559:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462670	20464599	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001559;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001559;transcript_name=CHM13_chrY_T0001559;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001559:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001559;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001559;transcript_name=CHM13_chrY_T0001559;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001559:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001559;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001559;transcript_name=CHM13_chrY_T0001559;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001559:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001559;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001559;transcript_name=CHM13_chrY_T0001559;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001559:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473541	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001559;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001559;transcript_name=CHM13_chrY_T0001559;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001559:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473569	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001559;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001559;transcript_name=CHM13_chrY_T0001559;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001559:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473619	1000	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001560;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001560;gene_name=BCORP1;ID=CHM13_chrY_T0001560;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001560;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001560;transcript_name=CHM13_chrY_T0001560;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001560:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20464599	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001560;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001560;transcript_name=CHM13_chrY_T0001560;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001560:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001560;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001560;transcript_name=CHM13_chrY_T0001560;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001560:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473536	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001560;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001560;transcript_name=CHM13_chrY_T0001560;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001560:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473537	20473619	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001560;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001560;transcript_name=CHM13_chrY_T0001560;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001560:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473604	1000	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001561;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001561;gene_name=BCORP1;ID=CHM13_chrY_T0001561;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001561;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001561;transcript_name=CHM13_chrY_T0001561;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001561:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001561;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001561;transcript_name=CHM13_chrY_T0001561;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001561:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001561;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001561;transcript_name=CHM13_chrY_T0001561;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001561:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001561;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001561;transcript_name=CHM13_chrY_T0001561;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001561:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001561;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001561;transcript_name=CHM13_chrY_T0001561;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001561:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473536	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001561;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001561;transcript_name=CHM13_chrY_T0001561;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001561:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473537	20473604	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001561;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001561;transcript_name=CHM13_chrY_T0001561;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001561:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473608	1000	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001562;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001562;gene_name=BCORP1;ID=CHM13_chrY_T0001562;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20463372	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001562;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001562;transcript_name=CHM13_chrY_T0001562;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001562:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463373	20463789	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001562;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001562;transcript_name=CHM13_chrY_T0001562;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001562:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001562;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001562;transcript_name=CHM13_chrY_T0001562;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001562:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001562;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001562;transcript_name=CHM13_chrY_T0001562;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001562:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001562;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001562;transcript_name=CHM13_chrY_T0001562;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001562:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001562;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001562;transcript_name=CHM13_chrY_T0001562;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001562:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473608	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001562;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001562;transcript_name=CHM13_chrY_T0001562;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001562:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473647	1000	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001563;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001563;gene_name=BCORP1;ID=CHM13_chrY_T0001563;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001563;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001563;transcript_name=CHM13_chrY_T0001563;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001563:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20463789	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001563;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001563;transcript_name=CHM13_chrY_T0001563;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001563:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001563;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001563;transcript_name=CHM13_chrY_T0001563;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001563:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001563;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001563;transcript_name=CHM13_chrY_T0001563;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001563:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001563;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001563;transcript_name=CHM13_chrY_T0001563;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001563:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473536	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001563;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001563;transcript_name=CHM13_chrY_T0001563;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001563:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473537	20473647	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001563;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001563;transcript_name=CHM13_chrY_T0001563;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001563:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473604	1000	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001564;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001564;gene_name=BCORP1;ID=CHM13_chrY_T0001564;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462749	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001564;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001564;transcript_name=CHM13_chrY_T0001564;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001564:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462750	20463789	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001564;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001564;transcript_name=CHM13_chrY_T0001564;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001564:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001564;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001564;transcript_name=CHM13_chrY_T0001564;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001564:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001564;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001564;transcript_name=CHM13_chrY_T0001564;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001564:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001564;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001564;transcript_name=CHM13_chrY_T0001564;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001564:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001564;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001564;transcript_name=CHM13_chrY_T0001564;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001564:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473604	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001564;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001564;transcript_name=CHM13_chrY_T0001564;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001564:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473604	1000	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001565;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001565;gene_name=BCORP1;ID=CHM13_chrY_T0001565;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001565;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001565;transcript_name=CHM13_chrY_T0001565;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001565:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20464599	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001565;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001565;transcript_name=CHM13_chrY_T0001565;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001565:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001565;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001565;transcript_name=CHM13_chrY_T0001565;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001565:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001565;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001565;transcript_name=CHM13_chrY_T0001565;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001565:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465984	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001565;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001565;transcript_name=CHM13_chrY_T0001565;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001565:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465985	20473541	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001565;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001565;transcript_name=CHM13_chrY_T0001565;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001565:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473604	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001565;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001565;transcript_name=CHM13_chrY_T0001565;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001565:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473590	1000	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001566;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001566;gene_name=BCORP1;ID=CHM13_chrY_T0001566;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001566;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001566;transcript_name=CHM13_chrY_T0001566;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001566:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462570	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001566;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001566;transcript_name=CHM13_chrY_T0001566;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001566:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462571	20462749	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001566;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001566;transcript_name=CHM13_chrY_T0001566;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001566:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462750	20464583	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001566;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001566;transcript_name=CHM13_chrY_T0001566;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001566:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001566;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001566;transcript_name=CHM13_chrY_T0001566;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001566:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001566;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001566;transcript_name=CHM13_chrY_T0001566;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001566:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473590	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001566;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001566;transcript_name=CHM13_chrY_T0001566;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001566:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473830	1000	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001567;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001567;gene_name=BCORP1;ID=CHM13_chrY_T0001567;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001567;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001567;transcript_name=CHM13_chrY_T0001567;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001567:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20464599	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001567;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001567;transcript_name=CHM13_chrY_T0001567;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001567:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001567;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001567;transcript_name=CHM13_chrY_T0001567;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001567:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001567;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001567;transcript_name=CHM13_chrY_T0001567;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001567:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001567;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001567;transcript_name=CHM13_chrY_T0001567;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001567:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473541	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001567;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001567;transcript_name=CHM13_chrY_T0001567;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001567:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473830	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001567;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001567;transcript_name=CHM13_chrY_T0001567;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001567:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473595	1000	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=CHM13_chrY_T0001568;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001568;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001568:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001568;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001568:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001568;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001568:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20462615	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001568;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001568:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462616	20462669	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001568;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001568:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462670	20463789	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001568;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001568:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001568;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001568:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001568;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001568:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001568;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001568:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465173	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001568;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001568:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465174	20465254	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001568;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001568:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465255	20473541	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001568;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001568:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473595	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001568;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001568;transcript_name=CHM13_chrY_T0001568;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001568:6;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461950	20473571	1000	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001569;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001569;gene_name=BCORP1;ID=CHM13_chrY_T0001569;Name=BCORP1
CHM13_chrY	CAT	exon	20461950	20462114	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001569;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001569;transcript_name=CHM13_chrY_T0001569;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001569:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001569;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001569;transcript_name=CHM13_chrY_T0001569;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001569:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001569;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001569;transcript_name=CHM13_chrY_T0001569;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001569:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20463789	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001569;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001569;transcript_name=CHM13_chrY_T0001569;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001569:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001569;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001569;transcript_name=CHM13_chrY_T0001569;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001569:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001569;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001569;transcript_name=CHM13_chrY_T0001569;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001569:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001569;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001569;transcript_name=CHM13_chrY_T0001569;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001569:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001569;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001569;transcript_name=CHM13_chrY_T0001569;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001569:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001569;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001569;transcript_name=CHM13_chrY_T0001569;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001569:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473541	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001569;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001569;transcript_name=CHM13_chrY_T0001569;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001569:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473571	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001569;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001569;transcript_name=CHM13_chrY_T0001569;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001569:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461953	20473604	1000	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001570;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001570;gene_name=BCORP1;ID=CHM13_chrY_T0001570;Name=BCORP1
CHM13_chrY	CAT	exon	20461953	20462114	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001570;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001570;transcript_name=CHM13_chrY_T0001570;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001570:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462570	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001570;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001570;transcript_name=CHM13_chrY_T0001570;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001570:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462571	20462669	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001570;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001570;transcript_name=CHM13_chrY_T0001570;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001570:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462670	20464583	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001570;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001570;transcript_name=CHM13_chrY_T0001570;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001570:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001570;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001570;transcript_name=CHM13_chrY_T0001570;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001570:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001570;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001570;transcript_name=CHM13_chrY_T0001570;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001570:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473604	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001570;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001570;transcript_name=CHM13_chrY_T0001570;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001570:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461958	20473595	1000	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001571;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001571;gene_name=BCORP1;ID=CHM13_chrY_T0001571;Name=BCORP1
CHM13_chrY	CAT	exon	20461958	20462114	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001571;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001571;transcript_name=CHM13_chrY_T0001571;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001571:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001571;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001571;transcript_name=CHM13_chrY_T0001571;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001571:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001571;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001571;transcript_name=CHM13_chrY_T0001571;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001571:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20463789	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001571;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001571;transcript_name=CHM13_chrY_T0001571;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001571:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001571;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001571;transcript_name=CHM13_chrY_T0001571;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001571:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001571;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001571;transcript_name=CHM13_chrY_T0001571;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001571:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001571;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001571;transcript_name=CHM13_chrY_T0001571;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001571:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20473541	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001571;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001571;transcript_name=CHM13_chrY_T0001571;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001571:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473595	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001571;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001571;transcript_name=CHM13_chrY_T0001571;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001571:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461958	20473567	1000	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001572;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001572;gene_name=BCORP1;ID=CHM13_chrY_T0001572;Name=BCORP1
CHM13_chrY	CAT	exon	20461958	20462114	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001572;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001572;transcript_name=CHM13_chrY_T0001572;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001572:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001572;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001572;transcript_name=CHM13_chrY_T0001572;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001572:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001572;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001572;transcript_name=CHM13_chrY_T0001572;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001572:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20464583	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001572;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001572;transcript_name=CHM13_chrY_T0001572;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001572:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001572;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001572;transcript_name=CHM13_chrY_T0001572;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001572:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001572;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001572;transcript_name=CHM13_chrY_T0001572;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001572:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001572;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001572;transcript_name=CHM13_chrY_T0001572;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001572:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473541	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001572;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001572;transcript_name=CHM13_chrY_T0001572;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001572:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473567	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001572;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001572;transcript_name=CHM13_chrY_T0001572;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001572:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461958	20473796	1000	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001573;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001573;gene_name=BCORP1;ID=CHM13_chrY_T0001573;Name=BCORP1
CHM13_chrY	CAT	exon	20461958	20462114	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001573;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001573;transcript_name=CHM13_chrY_T0001573;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001573:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001573;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001573;transcript_name=CHM13_chrY_T0001573;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001573:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001573;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001573;transcript_name=CHM13_chrY_T0001573;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001573:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20464599	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001573;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001573;transcript_name=CHM13_chrY_T0001573;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001573:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001573;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001573;transcript_name=CHM13_chrY_T0001573;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001573:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465173	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001573;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001573;transcript_name=CHM13_chrY_T0001573;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001573:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465174	20465229	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001573;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001573;transcript_name=CHM13_chrY_T0001573;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001573:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465230	20465899	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001573;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001573;transcript_name=CHM13_chrY_T0001573;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001573:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465984	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001573;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001573;transcript_name=CHM13_chrY_T0001573;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001573:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465985	20473541	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001573;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001573;transcript_name=CHM13_chrY_T0001573;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001573:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473796	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001573;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001573;transcript_name=CHM13_chrY_T0001573;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001573:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461959	20473569	1000	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001574;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001574;gene_name=BCORP1;ID=CHM13_chrY_T0001574;Name=BCORP1
CHM13_chrY	CAT	exon	20461959	20462114	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001574;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001574;transcript_name=CHM13_chrY_T0001574;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001574:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001574;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001574;transcript_name=CHM13_chrY_T0001574;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001574:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001574;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001574;transcript_name=CHM13_chrY_T0001574;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001574:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20464599	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001574;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001574;transcript_name=CHM13_chrY_T0001574;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001574:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001574;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001574;transcript_name=CHM13_chrY_T0001574;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001574:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465173	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001574;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001574;transcript_name=CHM13_chrY_T0001574;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001574:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465174	20465254	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001574;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001574;transcript_name=CHM13_chrY_T0001574;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001574:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465255	20465899	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001574;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001574;transcript_name=CHM13_chrY_T0001574;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001574:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001574;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001574;transcript_name=CHM13_chrY_T0001574;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001574:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473541	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001574;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001574;transcript_name=CHM13_chrY_T0001574;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001574:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473569	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001574;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001574;transcript_name=CHM13_chrY_T0001574;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001574:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20461961	20465979	1000	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001575;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001575;gene_name=BCORP1;ID=CHM13_chrY_T0001575;Name=BCORP1
CHM13_chrY	CAT	exon	20461961	20462114	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001575;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001575;transcript_name=CHM13_chrY_T0001575;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001575:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462115	20462409	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001575;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001575;transcript_name=CHM13_chrY_T0001575;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001575:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462410	20462524	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001575;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001575;transcript_name=CHM13_chrY_T0001575;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001575:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462525	20462615	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001575;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001575;transcript_name=CHM13_chrY_T0001575;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001575:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20462616	20462749	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001575;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001575;transcript_name=CHM13_chrY_T0001575;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001575:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20462750	20463789	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001575;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001575;transcript_name=CHM13_chrY_T0001575;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001575:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001575;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001575;transcript_name=CHM13_chrY_T0001575;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001575:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001575;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001575;transcript_name=CHM13_chrY_T0001575;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001575:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001575;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001575;transcript_name=CHM13_chrY_T0001575;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001575:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001575;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001575;transcript_name=CHM13_chrY_T0001575;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001575:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001575;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001575;transcript_name=CHM13_chrY_T0001575;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001575:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20462910	20473569	1000	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001576;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001576;gene_name=BCORP1;ID=CHM13_chrY_T0001576;Name=BCORP1
CHM13_chrY	CAT	exon	20462910	20463372	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001576;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001576;transcript_name=CHM13_chrY_T0001576;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001576:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463373	20463789	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001576;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001576;transcript_name=CHM13_chrY_T0001576;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001576:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001576;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001576;transcript_name=CHM13_chrY_T0001576;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001576:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001576;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001576;transcript_name=CHM13_chrY_T0001576;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001576:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001576;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001576;transcript_name=CHM13_chrY_T0001576;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001576:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001576;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001576;transcript_name=CHM13_chrY_T0001576;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001576:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001576;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001576;transcript_name=CHM13_chrY_T0001576;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001576:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473541	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001576;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001576;transcript_name=CHM13_chrY_T0001576;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001576:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473542	20473569	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001576;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001576;transcript_name=CHM13_chrY_T0001576;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001576:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20463078	20465229	1000	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001577;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001577;gene_name=BCORP1;ID=CHM13_chrY_T0001577;Name=BCORP1
CHM13_chrY	CAT	exon	20463078	20463372	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001577;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001577;transcript_name=CHM13_chrY_T0001577;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001577:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463373	20463789	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001577;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001577;transcript_name=CHM13_chrY_T0001577;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001577:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001577;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001577;transcript_name=CHM13_chrY_T0001577;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001577:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464599	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001577;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001577;transcript_name=CHM13_chrY_T0001577;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001577:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464600	20464700	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001577;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001577;transcript_name=CHM13_chrY_T0001577;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001577:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465173	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001577;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001577;transcript_name=CHM13_chrY_T0001577;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001577:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465174	20465229	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001577;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001577;transcript_name=CHM13_chrY_T0001577;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001577:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20463221	20473569	1000	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001578;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_G0000534;transcript_name=CHM13_chrY_T0001578;gene_name=BCORP1;ID=CHM13_chrY_T0001578;Name=BCORP1
CHM13_chrY	CAT	exon	20463221	20463372	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001578;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001578;transcript_name=CHM13_chrY_T0001578;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001578:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463373	20463789	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001578;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001578;transcript_name=CHM13_chrY_T0001578;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001578:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20463790	20463849	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001578;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001578;transcript_name=CHM13_chrY_T0001578;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001578:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20463850	20464583	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001578;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001578;transcript_name=CHM13_chrY_T0001578;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001578:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20464584	20464700	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001578;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001578;transcript_name=CHM13_chrY_T0001578;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001578:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20464701	20465899	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001578;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001578;transcript_name=CHM13_chrY_T0001578;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001578:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20465900	20465979	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001578;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001578;transcript_name=CHM13_chrY_T0001578;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001578:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20465980	20473536	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001578;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001578;transcript_name=CHM13_chrY_T0001578;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001578:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20473537	20473569	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001578;gene_id=CHM13_chrY_G0000534;Parent=CHM13_chrY_T0001578;transcript_name=CHM13_chrY_T0001578;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001578:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20363167	20391448	.	-	.	source_gene_common_name=BCORP1;source_gene=ENSG00000215580.13;gene_id=CHM13_chrY_G0000535;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=BCORP1;gene_sources=liftoff;ID=CHM13_chrY_G0000535;Name=BCORP1
CHM13_chrY	CAT	transcript	20363167	20391448	1000	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_G0000535;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=CHM13_chrY_T0001516;Name=BCORP1
CHM13_chrY	CAT	exon	20363167	20363446	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001516:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20363447	20365490	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001516:0;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20365491	20365646	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001516:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20365647	20365855	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001516:1;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20365856	20365933	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001516:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20365934	20366525	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001516:2;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20366526	20366671	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001516:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20366672	20373019	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001516:3;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20373020	20373271	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001516:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20373272	20373627	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001516:4;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20373628	20373938	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001516:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20373939	20380468	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001516:5;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20380469	20380814	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001516:6;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20380815	20381203	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001516:6;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20381204	20381467	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001516:7;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20381468	20386728	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001516:7;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20386729	20386858	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001516:8;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20386859	20387254	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001516:8;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20387255	20387302	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001516:9;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20387303	20388230	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=intron:CHM13_chrY_T0001516:9;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20388231	20391448	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=CHM13_chrY_T0001516;gene_id=CHM13_chrY_G0000535;Parent=CHM13_chrY_T0001516;transcript_name=CHM13_chrY_T0001516;gene_name=BCORP1;ID=exon:CHM13_chrY_T0001516:10;Name=BCORP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20473873	20512836	.	+	.	source_gene_common_name=TXLNGY;source_gene=ENSG00000291033.2;gene_id=CHM13_chrY_G0000536;gene_biotype=lncRNA;gene_name=TXLNGY;gene_sources=liftoff;ID=CHM13_chrY_G0000536;Name=TXLNGY
CHM13_chrY	CAT	transcript	20473873	20500725	1000	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=CHM13_chrY_T0001579;Name=TXLNGY
CHM13_chrY	CAT	exon	20473873	20474130	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001579;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001579:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001579;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001579:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001579;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001579:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001579;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001579:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20494971	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001579;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001579:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494972	20495102	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001579;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001579:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20495103	20495210	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001579;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001579:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495211	20496080	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001579;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001579:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001579;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001579:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20498339	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001579;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001579:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20498340	20498519	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001579;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001579:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20498520	20499958	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001579;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001579:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500725	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001579;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001579;transcript_name=CHM13_chrY_T0001579;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001579:6;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473873	20496807	1000	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001580;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001580;gene_name=TXLNGY;ID=CHM13_chrY_T0001580;Name=TXLNGY
CHM13_chrY	CAT	exon	20473873	20474042	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001580;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001580;transcript_name=CHM13_chrY_T0001580;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001580:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001580;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001580;transcript_name=CHM13_chrY_T0001580;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001580:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001580;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001580;transcript_name=CHM13_chrY_T0001580;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001580:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001580;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001580;transcript_name=CHM13_chrY_T0001580;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001580:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20495210	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001580;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001580;transcript_name=CHM13_chrY_T0001580;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001580:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495211	20496086	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001580;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001580;transcript_name=CHM13_chrY_T0001580;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001580:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496087	20496172	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001580;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001580;transcript_name=CHM13_chrY_T0001580;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001580:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001580;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001580;transcript_name=CHM13_chrY_T0001580;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001580:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496807	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001580;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001580;transcript_name=CHM13_chrY_T0001580;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001580:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473886	20494719	1000	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001581;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001581;gene_name=TXLNGY;ID=CHM13_chrY_T0001581;Name=TXLNGY
CHM13_chrY	CAT	exon	20473886	20474130	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001581;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001581;transcript_name=CHM13_chrY_T0001581;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001581:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001581;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001581;transcript_name=CHM13_chrY_T0001581;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001581:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494719	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001581;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001581;transcript_name=CHM13_chrY_T0001581;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001581:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473888	20475131	1000	+	.	source_transcript=ENST00000688167.3;source_transcript_name=TXLNGY-217;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000688167.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000688167.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001582;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001582;gene_name=TXLNGY;ID=CHM13_chrY_T0001582;Name=TXLNGY
CHM13_chrY	CAT	exon	20473888	20475131	.	+	.	source_transcript=ENST00000688167.3;source_transcript_name=TXLNGY-217;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000688167.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000688167.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001582;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001582;transcript_name=CHM13_chrY_T0001582;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001582:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473888	20496407	1000	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001583;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001583;gene_name=TXLNGY;ID=CHM13_chrY_T0001583;Name=TXLNGY
CHM13_chrY	CAT	exon	20473888	20474511	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001583;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001583;transcript_name=CHM13_chrY_T0001583;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001583:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474512	20493769	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001583;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001583;transcript_name=CHM13_chrY_T0001583;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001583:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20496407	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001583;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001583;transcript_name=CHM13_chrY_T0001583;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001583:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473889	20496983	1000	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001584;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001584;gene_name=TXLNGY;ID=CHM13_chrY_T0001584;Name=TXLNGY
CHM13_chrY	CAT	exon	20473889	20474042	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001584;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001584;transcript_name=CHM13_chrY_T0001584;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001584:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001584;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001584;transcript_name=CHM13_chrY_T0001584;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001584:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001584;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001584;transcript_name=CHM13_chrY_T0001584;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001584:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001584;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001584;transcript_name=CHM13_chrY_T0001584;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001584:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20496983	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001584;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001584;transcript_name=CHM13_chrY_T0001584;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001584:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473889	20496983	1000	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001585;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001585;gene_name=TXLNGY;ID=CHM13_chrY_T0001585;Name=TXLNGY
CHM13_chrY	CAT	exon	20473889	20474130	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001585;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001585;transcript_name=CHM13_chrY_T0001585;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001585:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001585;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001585;transcript_name=CHM13_chrY_T0001585;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001585:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001585;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001585;transcript_name=CHM13_chrY_T0001585;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001585:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001585;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001585;transcript_name=CHM13_chrY_T0001585;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001585:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20496172	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001585;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001585;transcript_name=CHM13_chrY_T0001585;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001585:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001585;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001585;transcript_name=CHM13_chrY_T0001585;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001585:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496983	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001585;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001585;transcript_name=CHM13_chrY_T0001585;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001585:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473889	20494718	1000	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001586;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001586;gene_name=TXLNGY;ID=CHM13_chrY_T0001586;Name=TXLNGY
CHM13_chrY	CAT	exon	20473889	20474042	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001586;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001586;transcript_name=CHM13_chrY_T0001586;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001586:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001586;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001586;transcript_name=CHM13_chrY_T0001586;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001586:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494718	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001586;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001586;transcript_name=CHM13_chrY_T0001586;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001586:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473891	20496979	1000	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001587;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001587;gene_name=TXLNGY;ID=CHM13_chrY_T0001587;Name=TXLNGY
CHM13_chrY	CAT	exon	20473891	20474130	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001587;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001587;transcript_name=CHM13_chrY_T0001587;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001587:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001587;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001587;transcript_name=CHM13_chrY_T0001587;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001587:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001587;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001587;transcript_name=CHM13_chrY_T0001587;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001587:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001587;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001587;transcript_name=CHM13_chrY_T0001587;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001587:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20496979	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001587;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001587;transcript_name=CHM13_chrY_T0001587;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001587:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473891	20500725	1000	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001588;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001588;gene_name=TXLNGY;ID=CHM13_chrY_T0001588;Name=TXLNGY
CHM13_chrY	CAT	exon	20473891	20474130	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001588;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001588;transcript_name=CHM13_chrY_T0001588;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001588:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001588;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001588;transcript_name=CHM13_chrY_T0001588;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001588:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001588;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001588;transcript_name=CHM13_chrY_T0001588;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001588:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001588;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001588;transcript_name=CHM13_chrY_T0001588;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001588:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20494971	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001588;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001588;transcript_name=CHM13_chrY_T0001588;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001588:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494972	20496080	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001588;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001588;transcript_name=CHM13_chrY_T0001588;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001588:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001588;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001588;transcript_name=CHM13_chrY_T0001588;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001588:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20498339	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001588;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001588;transcript_name=CHM13_chrY_T0001588;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001588:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20498340	20498519	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001588;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001588;transcript_name=CHM13_chrY_T0001588;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001588:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20498520	20499958	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001588;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001588;transcript_name=CHM13_chrY_T0001588;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001588:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500725	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001588;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001588;transcript_name=CHM13_chrY_T0001588;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001588:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473894	20496409	1000	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001589;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001589;gene_name=TXLNGY;ID=CHM13_chrY_T0001589;Name=TXLNGY
CHM13_chrY	CAT	exon	20473894	20474130	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001589;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001589;transcript_name=CHM13_chrY_T0001589;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001589:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20475944	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001589;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001589;transcript_name=CHM13_chrY_T0001589;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001589:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20475945	20476019	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001589;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001589;transcript_name=CHM13_chrY_T0001589;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001589:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20476020	20493769	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001589;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001589;transcript_name=CHM13_chrY_T0001589;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001589:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001589;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001589;transcript_name=CHM13_chrY_T0001589;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001589:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001589;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001589;transcript_name=CHM13_chrY_T0001589;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001589:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20496409	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001589;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001589;transcript_name=CHM13_chrY_T0001589;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001589:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473902	20500721	1000	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001590;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001590;gene_name=TXLNGY;ID=CHM13_chrY_T0001590;Name=TXLNGY
CHM13_chrY	CAT	exon	20473902	20474130	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001590;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001590;transcript_name=CHM13_chrY_T0001590;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001590:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001590;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001590;transcript_name=CHM13_chrY_T0001590;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001590:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001590;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001590;transcript_name=CHM13_chrY_T0001590;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001590:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20496080	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001590;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001590;transcript_name=CHM13_chrY_T0001590;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001590:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001590;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001590;transcript_name=CHM13_chrY_T0001590;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001590:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20499958	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001590;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001590;transcript_name=CHM13_chrY_T0001590;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001590:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500721	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001590;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001590;transcript_name=CHM13_chrY_T0001590;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001590:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473907	20496983	1000	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001591;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001591;gene_name=TXLNGY;ID=CHM13_chrY_T0001591;Name=TXLNGY
CHM13_chrY	CAT	exon	20473907	20474130	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001591;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001591;transcript_name=CHM13_chrY_T0001591;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001591:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001591;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001591;transcript_name=CHM13_chrY_T0001591;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001591:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001591;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001591;transcript_name=CHM13_chrY_T0001591;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001591:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001591;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001591;transcript_name=CHM13_chrY_T0001591;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001591:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20494971	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001591;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001591;transcript_name=CHM13_chrY_T0001591;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001591:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494972	20495102	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001591;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001591;transcript_name=CHM13_chrY_T0001591;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001591:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20495103	20495210	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001591;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001591;transcript_name=CHM13_chrY_T0001591;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001591:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495211	20496080	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001591;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001591;transcript_name=CHM13_chrY_T0001591;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001591:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001591;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001591;transcript_name=CHM13_chrY_T0001591;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001591:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001591;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001591;transcript_name=CHM13_chrY_T0001591;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001591:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496983	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001591;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001591;transcript_name=CHM13_chrY_T0001591;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001591:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473910	20500721	1000	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=CHM13_chrY_T0001592;Name=TXLNGY
CHM13_chrY	CAT	exon	20473910	20474042	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001592:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001592:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001592:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001592:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20494971	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001592:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494972	20495102	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001592:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20495103	20495210	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001592:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495211	20496080	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001592:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001592:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20497169	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001592:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20497170	20497332	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001592:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20497333	20498339	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001592:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20498340	20498519	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001592:6;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20498520	20499958	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001592:6;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500721	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001592;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001592;transcript_name=CHM13_chrY_T0001592;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001592:7;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473910	20496983	1000	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001593;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001593;gene_name=TXLNGY;ID=CHM13_chrY_T0001593;Name=TXLNGY
CHM13_chrY	CAT	exon	20473910	20474130	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001593;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001593;transcript_name=CHM13_chrY_T0001593;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001593:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001593;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001593;transcript_name=CHM13_chrY_T0001593;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001593:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001593;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001593;transcript_name=CHM13_chrY_T0001593;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001593:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20495102	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001593;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001593;transcript_name=CHM13_chrY_T0001593;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001593:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20495103	20495210	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001593;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001593;transcript_name=CHM13_chrY_T0001593;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001593:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495211	20496080	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001593;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001593;transcript_name=CHM13_chrY_T0001593;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001593:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001593;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001593;transcript_name=CHM13_chrY_T0001593;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001593:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001593;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001593;transcript_name=CHM13_chrY_T0001593;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001593:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496983	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001593;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001593;transcript_name=CHM13_chrY_T0001593;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001593:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473910	20496983	1000	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001594;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001594;gene_name=TXLNGY;ID=CHM13_chrY_T0001594;Name=TXLNGY
CHM13_chrY	CAT	exon	20473910	20474042	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001594;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001594;transcript_name=CHM13_chrY_T0001594;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001594:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001594;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001594;transcript_name=CHM13_chrY_T0001594;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001594:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001594;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001594;transcript_name=CHM13_chrY_T0001594;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001594:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20496080	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001594;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001594;transcript_name=CHM13_chrY_T0001594;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001594:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001594;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001594;transcript_name=CHM13_chrY_T0001594;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001594:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001594;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001594;transcript_name=CHM13_chrY_T0001594;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001594:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496983	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001594;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001594;transcript_name=CHM13_chrY_T0001594;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001594:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473910	20496983	1000	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001595;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001595;gene_name=TXLNGY;ID=CHM13_chrY_T0001595;Name=TXLNGY
CHM13_chrY	CAT	exon	20473910	20474130	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001595;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001595;transcript_name=CHM13_chrY_T0001595;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001595:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001595;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001595;transcript_name=CHM13_chrY_T0001595;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001595:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001595;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001595;transcript_name=CHM13_chrY_T0001595;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001595:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20496080	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001595;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001595;transcript_name=CHM13_chrY_T0001595;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001595:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001595;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001595;transcript_name=CHM13_chrY_T0001595;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001595:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001595;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001595;transcript_name=CHM13_chrY_T0001595;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001595:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496983	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001595;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001595;transcript_name=CHM13_chrY_T0001595;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001595:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473910	20500721	1000	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001596;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001596;gene_name=TXLNGY;ID=CHM13_chrY_T0001596;Name=TXLNGY
CHM13_chrY	CAT	exon	20473910	20474042	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001596;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001596;transcript_name=CHM13_chrY_T0001596;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001596:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001596;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001596;transcript_name=CHM13_chrY_T0001596;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001596:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001596;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001596;transcript_name=CHM13_chrY_T0001596;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001596:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20495102	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001596;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001596;transcript_name=CHM13_chrY_T0001596;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001596:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20495103	20495210	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001596;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001596;transcript_name=CHM13_chrY_T0001596;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001596:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495211	20496080	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001596;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001596;transcript_name=CHM13_chrY_T0001596;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001596:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001596;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001596;transcript_name=CHM13_chrY_T0001596;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001596:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20498339	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001596;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001596;transcript_name=CHM13_chrY_T0001596;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001596:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20498340	20498519	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001596;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001596;transcript_name=CHM13_chrY_T0001596;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001596:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20498520	20499958	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001596;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001596;transcript_name=CHM13_chrY_T0001596;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001596:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500721	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001596;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001596;transcript_name=CHM13_chrY_T0001596;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001596:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473910	20496836	1000	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001597;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001597;gene_name=TXLNGY;ID=CHM13_chrY_T0001597;Name=TXLNGY
CHM13_chrY	CAT	exon	20473910	20474130	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001597;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001597;transcript_name=CHM13_chrY_T0001597;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001597:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20475433	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001597;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001597;transcript_name=CHM13_chrY_T0001597;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001597:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20475434	20475479	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001597;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001597;transcript_name=CHM13_chrY_T0001597;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001597:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20475480	20493769	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001597;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001597;transcript_name=CHM13_chrY_T0001597;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001597:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001597;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001597;transcript_name=CHM13_chrY_T0001597;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001597:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20496080	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001597;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001597;transcript_name=CHM13_chrY_T0001597;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001597:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001597;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001597;transcript_name=CHM13_chrY_T0001597;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001597:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001597;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001597;transcript_name=CHM13_chrY_T0001597;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001597:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496836	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001597;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001597;transcript_name=CHM13_chrY_T0001597;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001597:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473910	20500718	1000	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=CHM13_chrY_T0001598;Name=TXLNGY
CHM13_chrY	CAT	exon	20473910	20474042	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001598;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001598:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001598;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001598:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001598;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001598:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001598;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001598:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20494971	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001598;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001598:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494972	20495102	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001598;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001598:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20495103	20495210	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001598;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001598:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495211	20496080	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001598;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001598:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001598;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001598:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20498339	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001598;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001598:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20498340	20498519	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001598;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001598:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20498520	20499958	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001598;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001598:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500718	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001598;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001598;transcript_name=CHM13_chrY_T0001598;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001598:6;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473912	20496983	1000	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001599;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001599;gene_name=TXLNGY;ID=CHM13_chrY_T0001599;Name=TXLNGY
CHM13_chrY	CAT	exon	20473912	20474130	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001599;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001599;transcript_name=CHM13_chrY_T0001599;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001599:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001599;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001599;transcript_name=CHM13_chrY_T0001599;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001599:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001599;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001599;transcript_name=CHM13_chrY_T0001599;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001599:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20496642	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001599;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001599;transcript_name=CHM13_chrY_T0001599;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001599:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496983	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001599;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001599;transcript_name=CHM13_chrY_T0001599;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001599:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473912	20496979	1000	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001600;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001600;gene_name=TXLNGY;ID=CHM13_chrY_T0001600;Name=TXLNGY
CHM13_chrY	CAT	exon	20473912	20474130	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001600;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001600;transcript_name=CHM13_chrY_T0001600;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001600:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493780	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001600;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001600;transcript_name=CHM13_chrY_T0001600;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001600:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493781	20494067	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001600;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001600;transcript_name=CHM13_chrY_T0001600;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001600:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20495102	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001600;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001600;transcript_name=CHM13_chrY_T0001600;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001600:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20495103	20495210	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001600;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001600;transcript_name=CHM13_chrY_T0001600;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001600:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495211	20496080	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001600;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001600;transcript_name=CHM13_chrY_T0001600;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001600:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001600;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001600;transcript_name=CHM13_chrY_T0001600;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001600:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001600;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001600;transcript_name=CHM13_chrY_T0001600;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001600:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496979	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001600;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001600;transcript_name=CHM13_chrY_T0001600;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001600:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473915	20500721	1000	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001601;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001601;gene_name=TXLNGY;ID=CHM13_chrY_T0001601;Name=TXLNGY
CHM13_chrY	CAT	exon	20473915	20474042	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001601;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001601;transcript_name=CHM13_chrY_T0001601;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001601:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001601;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001601;transcript_name=CHM13_chrY_T0001601;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001601:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20493952	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001601;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001601;transcript_name=CHM13_chrY_T0001601;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001601:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20493953	20496080	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001601;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001601;transcript_name=CHM13_chrY_T0001601;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001601:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001601;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001601;transcript_name=CHM13_chrY_T0001601;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001601:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20498339	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001601;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001601;transcript_name=CHM13_chrY_T0001601;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001601:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20498340	20498519	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001601;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001601;transcript_name=CHM13_chrY_T0001601;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001601:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20498520	20499958	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001601;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001601;transcript_name=CHM13_chrY_T0001601;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001601:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500721	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001601;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001601;transcript_name=CHM13_chrY_T0001601;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001601:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473916	20496983	1000	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001602;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001602;gene_name=TXLNGY;ID=CHM13_chrY_T0001602;Name=TXLNGY
CHM13_chrY	CAT	exon	20473916	20474042	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001602;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001602;transcript_name=CHM13_chrY_T0001602;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001602:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001602;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001602;transcript_name=CHM13_chrY_T0001602;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001602:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001602;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001602;transcript_name=CHM13_chrY_T0001602;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001602:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001602;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001602;transcript_name=CHM13_chrY_T0001602;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001602:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20494971	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001602;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001602;transcript_name=CHM13_chrY_T0001602;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001602:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494972	20495102	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001602;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001602;transcript_name=CHM13_chrY_T0001602;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001602:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20495103	20495210	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001602;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001602;transcript_name=CHM13_chrY_T0001602;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001602:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495211	20496080	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001602;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001602;transcript_name=CHM13_chrY_T0001602;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001602:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001602;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001602;transcript_name=CHM13_chrY_T0001602;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001602:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001602;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001602;transcript_name=CHM13_chrY_T0001602;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001602:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496983	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001602;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001602;transcript_name=CHM13_chrY_T0001602;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001602:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473918	20494718	1000	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001603;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001603;gene_name=TXLNGY;ID=CHM13_chrY_T0001603;Name=TXLNGY
CHM13_chrY	CAT	exon	20473918	20474130	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001603;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001603;transcript_name=CHM13_chrY_T0001603;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001603:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493780	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001603;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001603;transcript_name=CHM13_chrY_T0001603;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001603:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493781	20494718	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001603;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001603;transcript_name=CHM13_chrY_T0001603;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001603:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473923	20500715	1000	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001604;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001604;gene_name=TXLNGY;ID=CHM13_chrY_T0001604;Name=TXLNGY
CHM13_chrY	CAT	exon	20473923	20474042	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001604;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001604;transcript_name=CHM13_chrY_T0001604;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001604:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001604;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001604;transcript_name=CHM13_chrY_T0001604;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001604:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001604;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001604;transcript_name=CHM13_chrY_T0001604;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001604:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001604;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001604;transcript_name=CHM13_chrY_T0001604;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001604:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20494971	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001604;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001604;transcript_name=CHM13_chrY_T0001604;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001604:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494972	20495102	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001604;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001604;transcript_name=CHM13_chrY_T0001604;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001604:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20495103	20495210	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001604;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001604;transcript_name=CHM13_chrY_T0001604;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001604:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495211	20496080	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001604;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001604;transcript_name=CHM13_chrY_T0001604;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001604:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001604;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001604;transcript_name=CHM13_chrY_T0001604;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001604:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20499958	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001604;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001604;transcript_name=CHM13_chrY_T0001604;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001604:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500715	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001604;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001604;transcript_name=CHM13_chrY_T0001604;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001604:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473926	20500718	1000	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001605;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001605;gene_name=TXLNGY;ID=CHM13_chrY_T0001605;Name=TXLNGY
CHM13_chrY	CAT	exon	20473926	20474042	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001605;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001605;transcript_name=CHM13_chrY_T0001605;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001605:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001605;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001605;transcript_name=CHM13_chrY_T0001605;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001605:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001605;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001605;transcript_name=CHM13_chrY_T0001605;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001605:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20496080	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001605;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001605;transcript_name=CHM13_chrY_T0001605;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001605:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001605;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001605;transcript_name=CHM13_chrY_T0001605;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001605:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20498339	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001605;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001605;transcript_name=CHM13_chrY_T0001605;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001605:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20498340	20498519	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001605;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001605;transcript_name=CHM13_chrY_T0001605;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001605:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20498520	20499958	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001605;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001605;transcript_name=CHM13_chrY_T0001605;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001605:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500718	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001605;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001605;transcript_name=CHM13_chrY_T0001605;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001605:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473926	20494718	1000	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001606;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001606;gene_name=TXLNGY;ID=CHM13_chrY_T0001606;Name=TXLNGY
CHM13_chrY	CAT	exon	20473926	20474130	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001606;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001606;transcript_name=CHM13_chrY_T0001606;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001606:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20483264	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001606;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001606;transcript_name=CHM13_chrY_T0001606;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001606:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20483265	20483382	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001606;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001606;transcript_name=CHM13_chrY_T0001606;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001606:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20483383	20493769	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001606;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001606;transcript_name=CHM13_chrY_T0001606;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001606:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494718	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001606;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001606;transcript_name=CHM13_chrY_T0001606;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001606:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473928	20496983	1000	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001607;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001607;gene_name=TXLNGY;ID=CHM13_chrY_T0001607;Name=TXLNGY
CHM13_chrY	CAT	exon	20473928	20474042	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001607;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001607;transcript_name=CHM13_chrY_T0001607;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001607:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001607;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001607;transcript_name=CHM13_chrY_T0001607;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001607:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001607;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001607;transcript_name=CHM13_chrY_T0001607;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001607:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001607;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001607;transcript_name=CHM13_chrY_T0001607;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001607:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20496172	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001607;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001607;transcript_name=CHM13_chrY_T0001607;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001607:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001607;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001607;transcript_name=CHM13_chrY_T0001607;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001607:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496983	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001607;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001607;transcript_name=CHM13_chrY_T0001607;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001607:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473932	20476001	1000	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001608;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001608;gene_name=TXLNGY;ID=CHM13_chrY_T0001608;Name=TXLNGY
CHM13_chrY	CAT	exon	20473932	20474130	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001608;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001608;transcript_name=CHM13_chrY_T0001608;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001608:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20474400	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001608;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001608;transcript_name=CHM13_chrY_T0001608;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001608:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20474401	20474511	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001608;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001608;transcript_name=CHM13_chrY_T0001608;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001608:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474512	20475944	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001608;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001608;transcript_name=CHM13_chrY_T0001608;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001608:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20475945	20476001	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001608;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001608;transcript_name=CHM13_chrY_T0001608;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001608:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473932	20496983	1000	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001609;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001609;gene_name=TXLNGY;ID=CHM13_chrY_T0001609;Name=TXLNGY
CHM13_chrY	CAT	exon	20473932	20474042	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001609;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001609;transcript_name=CHM13_chrY_T0001609;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001609:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001609;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001609;transcript_name=CHM13_chrY_T0001609;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001609:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001609;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001609;transcript_name=CHM13_chrY_T0001609;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001609:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001609;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001609;transcript_name=CHM13_chrY_T0001609;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001609:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20495949	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001609;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001609;transcript_name=CHM13_chrY_T0001609;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001609:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495950	20496080	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001609;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001609;transcript_name=CHM13_chrY_T0001609;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001609:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001609;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001609;transcript_name=CHM13_chrY_T0001609;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001609:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001609;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001609;transcript_name=CHM13_chrY_T0001609;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001609:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496983	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001609;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001609;transcript_name=CHM13_chrY_T0001609;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001609:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473936	20500726	1000	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001610;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001610;gene_name=TXLNGY;ID=CHM13_chrY_T0001610;Name=TXLNGY
CHM13_chrY	CAT	exon	20473936	20474130	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001610;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001610;transcript_name=CHM13_chrY_T0001610;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001610:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001610;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001610;transcript_name=CHM13_chrY_T0001610;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001610:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001610;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001610;transcript_name=CHM13_chrY_T0001610;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001610:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20496080	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001610;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001610;transcript_name=CHM13_chrY_T0001610;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001610:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001610;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001610;transcript_name=CHM13_chrY_T0001610;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001610:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20498339	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001610;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001610;transcript_name=CHM13_chrY_T0001610;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001610:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20498340	20498519	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001610;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001610;transcript_name=CHM13_chrY_T0001610;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001610:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20498520	20499958	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001610;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001610;transcript_name=CHM13_chrY_T0001610;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001610:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500726	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001610;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001610;transcript_name=CHM13_chrY_T0001610;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001610:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473937	20496409	1000	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001611;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001611;gene_name=TXLNGY;ID=CHM13_chrY_T0001611;Name=TXLNGY
CHM13_chrY	CAT	exon	20473937	20474130	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001611;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001611;transcript_name=CHM13_chrY_T0001611;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001611:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20483264	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001611;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001611;transcript_name=CHM13_chrY_T0001611;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001611:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20483265	20483382	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001611;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001611;transcript_name=CHM13_chrY_T0001611;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001611:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20483383	20493769	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001611;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001611;transcript_name=CHM13_chrY_T0001611;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001611:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001611;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001611;transcript_name=CHM13_chrY_T0001611;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001611:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001611;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001611;transcript_name=CHM13_chrY_T0001611;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001611:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20496409	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001611;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001611;transcript_name=CHM13_chrY_T0001611;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001611:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473938	20497284	1000	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001612;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001612;gene_name=TXLNGY;ID=CHM13_chrY_T0001612;Name=TXLNGY
CHM13_chrY	CAT	exon	20473938	20474130	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001612;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001612;transcript_name=CHM13_chrY_T0001612;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001612:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001612;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001612;transcript_name=CHM13_chrY_T0001612;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001612:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001612;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001612;transcript_name=CHM13_chrY_T0001612;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001612:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20496080	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001612;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001612;transcript_name=CHM13_chrY_T0001612;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001612:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001612;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001612;transcript_name=CHM13_chrY_T0001612;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001612:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20497169	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001612;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001612;transcript_name=CHM13_chrY_T0001612;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001612:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20497170	20497284	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001612;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001612;transcript_name=CHM13_chrY_T0001612;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001612:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473940	20500721	1000	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001613;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001613;gene_name=TXLNGY;ID=CHM13_chrY_T0001613;Name=TXLNGY
CHM13_chrY	CAT	exon	20473940	20474130	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001613;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001613;transcript_name=CHM13_chrY_T0001613;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001613:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001613;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001613;transcript_name=CHM13_chrY_T0001613;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001613:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001613;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001613;transcript_name=CHM13_chrY_T0001613;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001613:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20499958	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001613;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001613;transcript_name=CHM13_chrY_T0001613;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001613:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500721	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001613;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001613;transcript_name=CHM13_chrY_T0001613;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001613:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20473954	20496850	1000	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001615;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001615;gene_name=TXLNGY;ID=CHM13_chrY_T0001615;Name=TXLNGY
CHM13_chrY	CAT	exon	20473954	20474130	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001615;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001615;transcript_name=CHM13_chrY_T0001615;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001615:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474131	20493769	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001615;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001615;transcript_name=CHM13_chrY_T0001615;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001615:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001615;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001615;transcript_name=CHM13_chrY_T0001615;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001615:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001615;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001615;transcript_name=CHM13_chrY_T0001615;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001615:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20494971	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001615;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001615;transcript_name=CHM13_chrY_T0001615;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001615:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494972	20496080	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001615;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001615;transcript_name=CHM13_chrY_T0001615;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001615:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001615;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001615;transcript_name=CHM13_chrY_T0001615;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001615:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001615;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001615;transcript_name=CHM13_chrY_T0001615;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001615:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496850	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001615;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001615;transcript_name=CHM13_chrY_T0001615;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001615:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20474146	20496850	1000	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001616;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001616;gene_name=TXLNGY;ID=CHM13_chrY_T0001616;Name=TXLNGY
CHM13_chrY	CAT	exon	20474146	20474511	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001616;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001616;transcript_name=CHM13_chrY_T0001616;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001616:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474512	20493769	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001616;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001616;transcript_name=CHM13_chrY_T0001616;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001616:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001616;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001616;transcript_name=CHM13_chrY_T0001616;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001616:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20496642	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001616;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001616;transcript_name=CHM13_chrY_T0001616;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001616:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496850	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001616;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001616;transcript_name=CHM13_chrY_T0001616;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001616:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20474347	20496409	1000	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001617;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001617;gene_name=TXLNGY;ID=CHM13_chrY_T0001617;Name=TXLNGY
CHM13_chrY	CAT	exon	20474347	20474511	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001617;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001617;transcript_name=CHM13_chrY_T0001617;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001617:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474512	20475944	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001617;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001617;transcript_name=CHM13_chrY_T0001617;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001617:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20475945	20476019	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001617;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001617;transcript_name=CHM13_chrY_T0001617;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001617:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20476020	20493769	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001617;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001617;transcript_name=CHM13_chrY_T0001617;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001617:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001617;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001617;transcript_name=CHM13_chrY_T0001617;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001617:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001617;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001617;transcript_name=CHM13_chrY_T0001617;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001617:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20496409	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001617;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001617;transcript_name=CHM13_chrY_T0001617;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001617:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20474399	20496983	1000	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001618;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001618;gene_name=TXLNGY;ID=CHM13_chrY_T0001618;Name=TXLNGY
CHM13_chrY	CAT	exon	20474399	20474511	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001618;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001618;transcript_name=CHM13_chrY_T0001618;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001618:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474512	20483264	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001618;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001618;transcript_name=CHM13_chrY_T0001618;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001618:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20483265	20483382	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001618;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001618;transcript_name=CHM13_chrY_T0001618;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001618:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20483383	20493769	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001618;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001618;transcript_name=CHM13_chrY_T0001618;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001618:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001618;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001618;transcript_name=CHM13_chrY_T0001618;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001618:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001618;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001618;transcript_name=CHM13_chrY_T0001618;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001618:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20495949	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001618;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001618;transcript_name=CHM13_chrY_T0001618;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001618:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495950	20496080	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001618;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001618;transcript_name=CHM13_chrY_T0001618;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001618:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001618;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001618;transcript_name=CHM13_chrY_T0001618;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001618:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001618;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001618;transcript_name=CHM13_chrY_T0001618;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001618:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496983	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001618;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001618;transcript_name=CHM13_chrY_T0001618;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001618:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20474399	20499982	1000	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001619;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001619;gene_name=TXLNGY;ID=CHM13_chrY_T0001619;Name=TXLNGY
CHM13_chrY	CAT	exon	20474399	20474511	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001619;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001619;transcript_name=CHM13_chrY_T0001619;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001619:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474512	20493769	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001619;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001619;transcript_name=CHM13_chrY_T0001619;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001619:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001619;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001619;transcript_name=CHM13_chrY_T0001619;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001619:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20496080	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001619;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001619;transcript_name=CHM13_chrY_T0001619;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001619:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001619;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001619;transcript_name=CHM13_chrY_T0001619;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001619:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20498339	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001619;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001619;transcript_name=CHM13_chrY_T0001619;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001619:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20498340	20498519	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001619;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001619;transcript_name=CHM13_chrY_T0001619;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001619:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20498520	20499958	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001619;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001619;transcript_name=CHM13_chrY_T0001619;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001619:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20499982	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001619;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001619;transcript_name=CHM13_chrY_T0001619;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001619:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20474403	20496979	1000	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001620;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001620;gene_name=TXLNGY;ID=CHM13_chrY_T0001620;Name=TXLNGY
CHM13_chrY	CAT	exon	20474403	20474511	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001620;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001620;transcript_name=CHM13_chrY_T0001620;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001620:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474512	20493769	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001620;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001620;transcript_name=CHM13_chrY_T0001620;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001620:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001620;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001620;transcript_name=CHM13_chrY_T0001620;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001620:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001620;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001620;transcript_name=CHM13_chrY_T0001620;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001620:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20494971	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001620;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001620;transcript_name=CHM13_chrY_T0001620;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001620:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494972	20495102	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001620;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001620;transcript_name=CHM13_chrY_T0001620;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001620:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20495103	20495210	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001620;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001620;transcript_name=CHM13_chrY_T0001620;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001620:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495211	20496080	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001620;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001620;transcript_name=CHM13_chrY_T0001620;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001620:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001620;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001620;transcript_name=CHM13_chrY_T0001620;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001620:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001620;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001620;transcript_name=CHM13_chrY_T0001620;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001620:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496979	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001620;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001620;transcript_name=CHM13_chrY_T0001620;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001620:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20474405	20494061	1000	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001621;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001621;gene_name=TXLNGY;ID=CHM13_chrY_T0001621;Name=TXLNGY
CHM13_chrY	CAT	exon	20474405	20474511	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001621;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001621;transcript_name=CHM13_chrY_T0001621;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001621:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474512	20475322	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001621;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001621;transcript_name=CHM13_chrY_T0001621;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001621:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20475323	20475479	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001621;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001621;transcript_name=CHM13_chrY_T0001621;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001621:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20475480	20493769	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001621;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001621;transcript_name=CHM13_chrY_T0001621;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001621:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494061	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001621;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001621;transcript_name=CHM13_chrY_T0001621;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001621:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20474418	20496764	1000	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=CHM13_chrY_T0001622;Name=TXLNGY
CHM13_chrY	CAT	exon	20474418	20474511	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001622;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001622:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474512	20475433	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001622;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001622:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20475434	20475479	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001622;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001622:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20475480	20493769	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001622;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001622:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001622;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001622:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20494929	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001622;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001622:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20494930	20494971	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001622;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001622:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494972	20495102	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001622;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001622:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20495103	20495210	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001622;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001622:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495211	20496080	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001622;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001622:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001622;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001622:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20496642	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001622;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001622:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496643	20496764	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001622;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001622;transcript_name=CHM13_chrY_T0001622;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001622:6;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20495169	20500162	1000	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001623;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001623;gene_name=TXLNGY;ID=CHM13_chrY_T0001623;Name=TXLNGY
CHM13_chrY	CAT	exon	20495169	20495210	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001623;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001623;transcript_name=CHM13_chrY_T0001623;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001623:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20495211	20496080	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001623;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001623;transcript_name=CHM13_chrY_T0001623;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001623:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001623;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001623;transcript_name=CHM13_chrY_T0001623;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001623:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20498479	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001623;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001623;transcript_name=CHM13_chrY_T0001623;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001623:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20498480	20498519	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001623;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001623;transcript_name=CHM13_chrY_T0001623;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001623:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20498520	20499958	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001623;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001623;transcript_name=CHM13_chrY_T0001623;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001623:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500162	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001623;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001623;transcript_name=CHM13_chrY_T0001623;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001623:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20497335	20500721	1000	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001624;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001624;gene_name=TXLNGY;ID=CHM13_chrY_T0001624;Name=TXLNGY
CHM13_chrY	CAT	exon	20497335	20498519	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001624;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001624;transcript_name=CHM13_chrY_T0001624;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001624:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20498520	20499958	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001624;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001624;transcript_name=CHM13_chrY_T0001624;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001624:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500721	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001624;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001624;transcript_name=CHM13_chrY_T0001624;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001624:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20499010	20512836	1000	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001625;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001625;gene_name=TXLNGY;ID=CHM13_chrY_T0001625;Name=TXLNGY
CHM13_chrY	CAT	exon	20499010	20499374	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001625;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001625;transcript_name=CHM13_chrY_T0001625;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001625:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20499375	20499958	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001625;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001625;transcript_name=CHM13_chrY_T0001625;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001625:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20504229	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001625;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001625;transcript_name=CHM13_chrY_T0001625;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001625:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20504230	20506302	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001625;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001625;transcript_name=CHM13_chrY_T0001625;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001625:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20506303	20506395	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001625;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001625;transcript_name=CHM13_chrY_T0001625;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001625:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20506396	20508779	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001625;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001625;transcript_name=CHM13_chrY_T0001625;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001625:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20508780	20508875	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001625;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001625;transcript_name=CHM13_chrY_T0001625;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001625:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20508876	20510360	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001625;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001625;transcript_name=CHM13_chrY_T0001625;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001625:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20510361	20512836	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001625;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001625;transcript_name=CHM13_chrY_T0001625;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001625:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20499648	20500721	1000	+	.	source_transcript=ENST00000593000.1;source_transcript_name=TXLNGY-214;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000593000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000593000.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001626;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001626;gene_name=TXLNGY;ID=CHM13_chrY_T0001626;Name=TXLNGY
CHM13_chrY	CAT	exon	20499648	20500721	.	+	.	source_transcript=ENST00000593000.1;source_transcript_name=TXLNGY-214;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000593000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000593000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001626;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001626;transcript_name=CHM13_chrY_T0001626;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001626:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20503921	20510615	1000	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001627;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_G0000536;transcript_name=CHM13_chrY_T0001627;gene_name=TXLNGY;ID=CHM13_chrY_T0001627;Name=TXLNGY
CHM13_chrY	CAT	exon	20503921	20504229	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001627;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001627;transcript_name=CHM13_chrY_T0001627;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001627:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20504230	20505115	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001627;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001627;transcript_name=CHM13_chrY_T0001627;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001627:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20505116	20505203	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001627;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001627;transcript_name=CHM13_chrY_T0001627;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001627:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20505204	20506302	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001627;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001627;transcript_name=CHM13_chrY_T0001627;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001627:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20506303	20506395	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001627;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001627;transcript_name=CHM13_chrY_T0001627;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001627:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20506396	20508779	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001627;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001627;transcript_name=CHM13_chrY_T0001627;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001627:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20508780	20508875	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001627;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001627;transcript_name=CHM13_chrY_T0001627;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001627:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20508876	20510360	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001627;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001627;transcript_name=CHM13_chrY_T0001627;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001627:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20510361	20510615	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001627;gene_id=CHM13_chrY_G0000536;Parent=CHM13_chrY_T0001627;transcript_name=CHM13_chrY_T0001627;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001627:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20473942	20510684	.	+	.	source_gene_common_name=TXLNGY;source_gene=ENSG00000131002.15;gene_id=CHM13_chrY_G0000537;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TXLNGY;gene_sources=liftoff;ID=CHM13_chrY_G0000537;Name=TXLNGY
CHM13_chrY	CAT	transcript	20473942	20510684	1000	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_G0000537;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=CHM13_chrY_T0001614;Name=TXLNGY
CHM13_chrY	CAT	exon	20473942	20474042	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001614:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20474043	20493769	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001614:0;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20493770	20494067	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001614:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20494068	20496080	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001614:1;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20496081	20496172	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001614:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20496173	20498339	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001614:2;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20498340	20498519	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001614:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20498520	20499958	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001614:3;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20499959	20500153	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001614:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20500154	20502574	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001614:4;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20502575	20502694	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001614:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20502695	20504154	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001614:5;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20504155	20504229	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001614:6;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20504230	20506302	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001614:6;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20506303	20506395	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001614:7;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20506396	20508779	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001614:7;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20508780	20508875	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001614:8;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20508876	20510360	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=intron:CHM13_chrY_T0001614:8;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20510361	20510684	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=CHM13_chrY_T0001614;gene_id=CHM13_chrY_G0000537;Parent=CHM13_chrY_T0001614;transcript_name=CHM13_chrY_T0001614;gene_name=TXLNGY;ID=exon:CHM13_chrY_T0001614:9;Name=TXLNGY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20504752	20505321	.	+	.	source_gene_common_name=ENSG00000267793;source_gene=ENSG00000267793.1;gene_id=CHM13_chrY_G0000538;gene_biotype=transcribed_processed_pseudogene;gene_name=ENSG00000267793;gene_sources=liftoff;ID=CHM13_chrY_G0000538;Name=ENSG00000267793
CHM13_chrY	CAT	transcript	20504752	20505321	1000	+	.	source_transcript=ENST00000586015.1;source_transcript_name=ENST00000586015;source_gene=ENSG00000267793.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000267793.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000586015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000586015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000267793;transcript_id=CHM13_chrY_T0001628;gene_id=CHM13_chrY_G0000538;Parent=CHM13_chrY_G0000538;transcript_name=CHM13_chrY_T0001628;gene_name=ENSG00000267793;ID=CHM13_chrY_T0001628;Name=ENSG00000267793
CHM13_chrY	CAT	exon	20504752	20505321	.	+	.	source_transcript=ENST00000586015.1;source_transcript_name=ENST00000586015;source_gene=ENSG00000267793.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000267793.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000586015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000586015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000267793;transcript_id=CHM13_chrY_T0001628;gene_id=CHM13_chrY_G0000538;Parent=CHM13_chrY_T0001628;transcript_name=CHM13_chrY_T0001628;gene_name=ENSG00000267793;ID=exon:CHM13_chrY_T0001628:0;Name=ENSG00000267793;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20598491	20601156	.	-	.	source_gene_common_name=ENSG00000260197;source_gene=ENSG00000260197.1;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;gene_id=CHM13_chrY_G0000539;gene_biotype=lncRNA;gene_name=ENSG00000260197;gene_sources=liftoff;ID=CHM13_chrY_G0000539;Name=ENSG00000260197
CHM13_chrY	CAT	transcript	20598491	20601156	1000	-	.	source_transcript=ENST00000566193.1;source_transcript_name=ENST00000566193;source_gene=ENSG00000260197.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000260197.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000566193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000566193.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000260197;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;transcript_id=CHM13_chrY_T0001629;gene_id=CHM13_chrY_G0000539;Parent=CHM13_chrY_G0000539;transcript_name=CHM13_chrY_T0001629;gene_name=ENSG00000260197;ID=CHM13_chrY_T0001629;Name=ENSG00000260197
CHM13_chrY	CAT	exon	20598491	20601156	.	-	.	source_transcript=ENST00000566193.1;source_transcript_name=ENST00000566193;source_gene=ENSG00000260197.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000260197.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000566193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000566193.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000260197;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;transcript_id=CHM13_chrY_T0001629;gene_id=CHM13_chrY_G0000539;Parent=CHM13_chrY_T0001629;transcript_name=CHM13_chrY_T0001629;gene_name=ENSG00000260197;ID=exon:CHM13_chrY_T0001629:0;Name=ENSG00000260197;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20610415	20651489	.	-	.	source_gene_common_name=KDM5D;source_gene=ENSG00000012817.16;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;gene_id=CHM13_chrY_G0000540;gene_biotype=protein_coding;gene_name=KDM5D;gene_sources=liftoff;ID=CHM13_chrY_G0000540;Name=KDM5D
CHM13_chrY	CAT	transcript	20610415	20651276	100	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_G0000540;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CHM13_chrY_T0001630;Name=KDM5D
CHM13_chrY	CAT	exon	20610415	20612895	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20612545	20612895	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	20612545	20612547	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=stop_codon:CHM13_chrY_T0001630;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20612896	20612990	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20612991	20613190	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20612991	20613190	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20613191	20613343	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20613344	20613413	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20613344	20613413	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20613414	20613696	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20613697	20614296	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20613697	20614296	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614297	20614483	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614484	20614621	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20614484	20614621	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614622	20614793	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614794	20614973	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20614794	20614973	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614974	20615424	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20615425	20615563	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20615425	20615563	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20615564	20616000	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20616001	20616359	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20616001	20616359	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20616360	20616925	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20616926	20617022	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20616926	20617022	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20617023	20621901	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20621902	20622049	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20621902	20622049	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622050	20622164	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622165	20622289	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20622165	20622289	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622290	20622372	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622373	20622554	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20622373	20622554	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622555	20622828	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622829	20623023	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20622829	20623023	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20623024	20623145	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20623146	20623265	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20623146	20623265	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20623266	20627421	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20627422	20627584	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:14;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20627422	20627584	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:14;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20627585	20627679	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:14;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20627680	20627861	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:15;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20627680	20627861	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:15;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20627862	20638321	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:15;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20638322	20638480	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:16;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20638322	20638480	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:16;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20638481	20638595	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:16;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20638596	20638715	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:17;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20638596	20638715	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:17;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20638716	20639133	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:17;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20639134	20639292	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:18;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20639134	20639292	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:18;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20639293	20641901	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:18;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20641902	20642047	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:19;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20641902	20642047	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:19;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20642048	20642170	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:19;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20642171	20642300	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:20;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20642171	20642300	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:20;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20642301	20646077	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:20;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20646078	20646212	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:21;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20646078	20646212	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:21;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20646213	20647867	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:21;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20647868	20648038	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:22;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20647868	20648038	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:22;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20648039	20648284	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:22;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20648285	20648407	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:23;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20648285	20648407	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:23;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20648408	20649711	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:23;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20649712	20649789	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:24;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20649712	20649789	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:24;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20649790	20650934	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:24;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20650935	20651103	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:25;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20650935	20651084	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001630:25;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	20651082	20651084	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=start_codon:CHM13_chrY_T0001630;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20651104	20651220	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001630:25;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20651221	20651276	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=CHM13_chrY_T0001630;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001630;transcript_name=CHM13_chrY_T0001630;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001630:26;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20610415	20623245	1000	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_G0000540;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=CHM13_chrY_T0001631;Name=KDM5D
CHM13_chrY	CAT	exon	20610415	20612895	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001631:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20612896	20612990	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001631:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20612991	20613413	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001631:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20613414	20613696	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001631:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20613697	20614296	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001631:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614297	20614483	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001631:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614484	20614621	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001631:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614622	20614793	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001631:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614794	20614973	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001631:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614974	20615424	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001631:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20615425	20615563	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001631:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20615564	20616000	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001631:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20616001	20616810	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001631:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20616811	20616925	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001631:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20616926	20617022	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001631:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20617023	20622133	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001631:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622134	20622289	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001631:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622290	20622372	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001631:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622373	20622554	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001631:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622555	20622828	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001631:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622829	20623023	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001631:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20623024	20623145	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001631:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20623146	20623245	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=CHM13_chrY_T0001631;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001631;transcript_name=CHM13_chrY_T0001631;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001631:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20611967	20651489	100	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_G0000540;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CHM13_chrY_T0001632;Name=KDM5D
CHM13_chrY	CAT	exon	20611967	20612895	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20612545	20612895	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	20612545	20612547	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=stop_codon:CHM13_chrY_T0001632;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20612896	20612990	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20612991	20613190	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20612991	20613190	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20613191	20613343	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20613344	20613413	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20613344	20613413	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20613414	20613696	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20613697	20614296	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20613697	20614296	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614297	20614483	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614484	20614621	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20614484	20614621	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614622	20614793	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614794	20614973	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20614794	20614973	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614974	20615424	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20615425	20615563	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20615425	20615563	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20615564	20616000	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20616001	20616359	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20616001	20616359	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20616360	20616925	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20616926	20617022	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20616926	20617022	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20617023	20621901	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20621902	20622049	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20621902	20622049	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622050	20622164	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622165	20622289	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20622165	20622289	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622290	20622372	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622373	20622554	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20622373	20622554	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622555	20622828	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622829	20623023	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20622829	20623023	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20623024	20623145	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20623146	20623265	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20623146	20623265	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20623266	20627421	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20627422	20627584	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:14;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20627422	20627584	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:14;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20627585	20627679	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:14;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20627680	20627861	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:15;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20627680	20627861	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:15;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20627862	20629890	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:15;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20629891	20629983	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:16;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20629891	20629983	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:16;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20629984	20638321	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:16;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20638322	20638480	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:17;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20638322	20638480	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:17;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20638481	20638595	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:17;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20638596	20638715	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:18;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20638596	20638715	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:18;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20638716	20639133	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:18;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20639134	20639292	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:19;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20639134	20639292	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:19;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20639293	20641901	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:19;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20641902	20642047	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:20;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20641902	20642047	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:20;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20642048	20642170	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:20;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20642171	20642300	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:21;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20642171	20642300	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:21;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20642301	20646077	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:21;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20646078	20646212	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:22;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20646078	20646212	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:22;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20646213	20647867	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:22;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20647868	20648038	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:23;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20647868	20648038	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:23;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20648039	20648284	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:23;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20648285	20648407	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:24;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20648285	20648407	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:24;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20648408	20649711	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:24;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20649712	20649789	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:25;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20649712	20649789	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:25;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20649790	20650934	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:25;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20650935	20651103	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:26;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20650935	20651084	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001632:26;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	20651082	20651084	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=start_codon:CHM13_chrY_T0001632;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20651104	20651220	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001632:26;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20651221	20651489	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=CHM13_chrY_T0001632;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001632;transcript_name=CHM13_chrY_T0001632;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001632:27;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20611970	20651311	100	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_G0000540;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CHM13_chrY_T0001633;Name=KDM5D
CHM13_chrY	CAT	exon	20611970	20612895	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20612545	20612895	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	20612545	20612547	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=stop_codon:CHM13_chrY_T0001633;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20612896	20612990	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20612991	20613190	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20612991	20613190	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20613191	20613343	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20613344	20613413	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20613344	20613413	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20613414	20613696	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20613697	20614296	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20613697	20614296	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614297	20614483	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614484	20614621	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20614484	20614621	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614622	20614793	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614794	20614973	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20614794	20614973	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614974	20615424	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20615425	20615563	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20615425	20615563	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20615564	20616000	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20616001	20616359	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20616001	20616359	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20616360	20616925	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20616926	20617022	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20616926	20617022	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20617023	20621901	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20621902	20622049	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20621902	20622049	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622050	20622164	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622165	20622289	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20622165	20622289	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622290	20622372	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622373	20622554	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20622373	20622554	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622555	20622828	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622829	20623023	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20622829	20623023	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20623024	20623145	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20623146	20623265	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20623146	20623265	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20623266	20627421	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20627422	20627584	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:14;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20627422	20627584	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:14;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20627585	20627679	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:14;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20627680	20627861	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:15;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20627680	20627861	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:15;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20627862	20638321	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:15;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20638322	20638480	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:16;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20638322	20638480	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:16;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20638481	20638595	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:16;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20638596	20638715	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:17;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20638596	20638715	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:17;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20638716	20639133	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:17;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20639134	20639292	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:18;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20639134	20639292	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:18;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20639293	20641901	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:18;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20641902	20642047	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:19;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20641902	20642047	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:19;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20642048	20642170	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:19;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20642171	20642300	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:20;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20642171	20642300	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:20;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20642301	20646077	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:20;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20646078	20646212	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:21;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20646078	20646212	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:21;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20646213	20648284	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:21;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20648285	20648407	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:22;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20648285	20648407	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:22;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20648408	20649711	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:22;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20649712	20649789	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:23;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20649712	20649789	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:23;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20649790	20650934	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:23;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20650935	20651103	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:24;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20650935	20651084	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001633:24;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	20651082	20651084	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=start_codon:CHM13_chrY_T0001633;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20651104	20651220	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001633:24;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20651221	20651311	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=CHM13_chrY_T0001633;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001633;transcript_name=CHM13_chrY_T0001633;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001633:25;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20611975	20629017	1000	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_G0000540;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=CHM13_chrY_T0001634;Name=KDM5D
CHM13_chrY	CAT	exon	20611975	20612895	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20612896	20612990	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20612991	20613413	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20613414	20613696	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20613697	20614296	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614297	20614483	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614484	20614621	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614622	20614793	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614794	20614973	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614974	20615424	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20615425	20615563	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20615564	20616000	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20616001	20616359	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20616360	20616925	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20616926	20617022	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20617023	20621901	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20621902	20622049	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622050	20622164	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622165	20622289	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622290	20622372	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622373	20622661	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622662	20622828	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622829	20623023	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20623024	20623145	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20623146	20623265	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20623266	20627421	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20627422	20627584	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20627585	20627679	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001634:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20627680	20629017	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=CHM13_chrY_T0001634;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001634;transcript_name=CHM13_chrY_T0001634;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001634:14;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20612613	20651473	100	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_G0000540;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CHM13_chrY_T0001635;Name=KDM5D
CHM13_chrY	CAT	exon	20612613	20612895	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20612613	20612895	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20612896	20612990	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20612991	20613190	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20612991	20613190	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20613191	20613343	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20613344	20613413	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20613344	20613413	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20613414	20613696	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20613697	20614296	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20613697	20614296	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614297	20614483	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614484	20614621	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20614484	20614621	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614622	20614793	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614794	20614973	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20614794	20614973	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614974	20615424	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20615425	20615563	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20615425	20615563	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20615564	20616000	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20616001	20616359	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20616001	20616359	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20616360	20616925	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20616926	20617022	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20616926	20617022	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20617023	20621901	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20621902	20622049	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20621902	20622049	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622050	20622164	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622165	20622289	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20622165	20622289	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622290	20622372	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622373	20622554	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20622373	20622554	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622555	20622828	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:11;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622829	20623023	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20622829	20623023	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20623024	20623145	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:12;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20623146	20623265	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20623146	20623265	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20623266	20627421	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:13;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20627422	20627584	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:14;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20627422	20627584	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:14;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20627585	20627679	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:14;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20627680	20627861	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:15;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20627680	20627861	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:15;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20627862	20638321	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:15;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20638322	20638480	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:16;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20638322	20638480	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:16;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20638481	20638595	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:16;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20638596	20638715	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:17;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20638596	20638715	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:17;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20638716	20639133	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:17;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20639134	20639292	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:18;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20639134	20639292	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:18;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20639293	20641901	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:18;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20641902	20642047	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:19;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20641902	20642047	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:19;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20642048	20642170	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:19;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20642171	20642300	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:20;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20642171	20642300	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:20;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20642301	20646077	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:20;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20646078	20646212	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:21;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20646078	20646212	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:21;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20646213	20647867	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:21;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20647868	20648038	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:22;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20647868	20648038	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:22;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20648039	20649711	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:22;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20649712	20649789	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:23;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20649712	20649789	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:23;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20649790	20650934	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:23;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20650935	20651103	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:24;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20650935	20651084	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001635:24;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	20651082	20651084	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=start_codon:CHM13_chrY_T0001635;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20651104	20651220	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001635:24;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20651221	20651473	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=CHM13_chrY_T0001635;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001635;transcript_name=CHM13_chrY_T0001635;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001635:25;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20613732	20615499	100	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=CHM13_chrY_T0001636;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_G0000540;transcript_name=CHM13_chrY_T0001636;gene_name=KDM5D;ID=CHM13_chrY_T0001636;Name=KDM5D
CHM13_chrY	CAT	exon	20613732	20614296	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=CHM13_chrY_T0001636;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001636;transcript_name=CHM13_chrY_T0001636;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001636:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20613732	20614296	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=CHM13_chrY_T0001636;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001636;transcript_name=CHM13_chrY_T0001636;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001636:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614297	20614483	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=CHM13_chrY_T0001636;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001636;transcript_name=CHM13_chrY_T0001636;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001636:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614484	20614621	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=CHM13_chrY_T0001636;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001636;transcript_name=CHM13_chrY_T0001636;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001636:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20614484	20614621	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=CHM13_chrY_T0001636;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001636;transcript_name=CHM13_chrY_T0001636;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001636:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614622	20614871	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=CHM13_chrY_T0001636;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001636;transcript_name=CHM13_chrY_T0001636;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001636:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20614872	20614973	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=CHM13_chrY_T0001636;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001636;transcript_name=CHM13_chrY_T0001636;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001636:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20614872	20614973	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=CHM13_chrY_T0001636;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001636;transcript_name=CHM13_chrY_T0001636;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001636:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20614974	20615424	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=CHM13_chrY_T0001636;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001636;transcript_name=CHM13_chrY_T0001636;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001636:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20615425	20615499	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=CHM13_chrY_T0001636;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001636;transcript_name=CHM13_chrY_T0001636;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001636:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20615425	20615499	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=CHM13_chrY_T0001636;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001636;transcript_name=CHM13_chrY_T0001636;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001636:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20616250	20617156	1000	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=CHM13_chrY_T0001637;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_G0000540;transcript_name=CHM13_chrY_T0001637;gene_name=KDM5D;ID=CHM13_chrY_T0001637;Name=KDM5D
CHM13_chrY	CAT	exon	20616250	20616810	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=CHM13_chrY_T0001637;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001637;transcript_name=CHM13_chrY_T0001637;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001637:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20616811	20616925	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=CHM13_chrY_T0001637;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001637;transcript_name=CHM13_chrY_T0001637;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001637:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20616926	20617156	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=CHM13_chrY_T0001637;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001637;transcript_name=CHM13_chrY_T0001637;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001637:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20621686	20622898	1000	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=CHM13_chrY_T0001638;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_G0000540;transcript_name=CHM13_chrY_T0001638;gene_name=KDM5D;ID=CHM13_chrY_T0001638;Name=KDM5D
CHM13_chrY	CAT	exon	20621686	20622289	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=CHM13_chrY_T0001638;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001638;transcript_name=CHM13_chrY_T0001638;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001638:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622290	20622372	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=CHM13_chrY_T0001638;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001638;transcript_name=CHM13_chrY_T0001638;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001638:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622373	20622554	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=CHM13_chrY_T0001638;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001638;transcript_name=CHM13_chrY_T0001638;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001638:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20622555	20622828	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=CHM13_chrY_T0001638;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001638;transcript_name=CHM13_chrY_T0001638;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001638:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20622829	20622898	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=CHM13_chrY_T0001638;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001638;transcript_name=CHM13_chrY_T0001638;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001638:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20627822	20651261	100	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_G0000540;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=CHM13_chrY_T0001639;Name=KDM5D
CHM13_chrY	CAT	exon	20627822	20627861	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001639:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20627822	20627861	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001639:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20627862	20638321	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001639:0;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20638322	20638480	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001639:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20638322	20638480	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001639:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20638481	20638595	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001639:1;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20638596	20638715	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001639:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20638596	20638715	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001639:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20638716	20639133	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001639:2;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20639134	20639292	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001639:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20639134	20639292	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001639:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20639293	20641901	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001639:3;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20641902	20642047	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001639:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20641902	20642047	.	-	2	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001639:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20642048	20642170	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001639:4;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20642171	20642300	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001639:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20642171	20642300	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001639:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20642301	20647867	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001639:5;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20647868	20648038	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001639:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20647868	20648038	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001639:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20648039	20648284	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001639:6;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20648285	20648407	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001639:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20648285	20648407	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001639:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20648408	20649711	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001639:7;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20649712	20649789	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001639:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20649712	20649789	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001639:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20649790	20650934	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001639:8;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20650935	20651103	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001639:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	20650935	20651084	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=CDS:CHM13_chrY_T0001639:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	20651082	20651084	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=start_codon:CHM13_chrY_T0001639;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20651104	20651220	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=intron:CHM13_chrY_T0001639:9;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20651221	20651261	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=CHM13_chrY_T0001639;gene_id=CHM13_chrY_G0000540;Parent=CHM13_chrY_T0001639;transcript_name=CHM13_chrY_T0001639;gene_name=KDM5D;ID=exon:CHM13_chrY_T0001639:10;Name=KDM5D;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20651306	20666528	.	+	.	source_gene_common_name=ENSG00000288049;source_gene=ENSG00000288049.2;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;gene_id=CHM13_chrY_G0000541;gene_biotype=lncRNA;gene_name=ENSG00000288049;gene_sources=liftoff;ID=CHM13_chrY_G0000541;Name=ENSG00000288049
CHM13_chrY	CAT	transcript	20651306	20663892	1000	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=CHM13_chrY_T0001640;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_G0000541;transcript_name=CHM13_chrY_T0001640;gene_name=ENSG00000288049;ID=CHM13_chrY_T0001640;Name=ENSG00000288049
CHM13_chrY	CAT	exon	20651306	20652263	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=CHM13_chrY_T0001640;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001640;transcript_name=CHM13_chrY_T0001640;gene_name=ENSG00000288049;ID=exon:CHM13_chrY_T0001640:0;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20652264	20661175	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=CHM13_chrY_T0001640;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001640;transcript_name=CHM13_chrY_T0001640;gene_name=ENSG00000288049;ID=intron:CHM13_chrY_T0001640:0;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20661176	20661365	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=CHM13_chrY_T0001640;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001640;transcript_name=CHM13_chrY_T0001640;gene_name=ENSG00000288049;ID=exon:CHM13_chrY_T0001640:1;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20661366	20661754	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=CHM13_chrY_T0001640;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001640;transcript_name=CHM13_chrY_T0001640;gene_name=ENSG00000288049;ID=intron:CHM13_chrY_T0001640:1;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20661755	20663892	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=CHM13_chrY_T0001640;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001640;transcript_name=CHM13_chrY_T0001640;gene_name=ENSG00000288049;ID=exon:CHM13_chrY_T0001640:2;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20651502	20666528	1000	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=CHM13_chrY_T0001641;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_G0000541;transcript_name=CHM13_chrY_T0001641;gene_name=ENSG00000288049;ID=CHM13_chrY_T0001641;Name=ENSG00000288049
CHM13_chrY	CAT	exon	20651502	20652263	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=CHM13_chrY_T0001641;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001641;transcript_name=CHM13_chrY_T0001641;gene_name=ENSG00000288049;ID=exon:CHM13_chrY_T0001641:0;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20652264	20661276	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=CHM13_chrY_T0001641;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001641;transcript_name=CHM13_chrY_T0001641;gene_name=ENSG00000288049;ID=intron:CHM13_chrY_T0001641:0;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20661277	20661365	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=CHM13_chrY_T0001641;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001641;transcript_name=CHM13_chrY_T0001641;gene_name=ENSG00000288049;ID=exon:CHM13_chrY_T0001641:1;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20661366	20661754	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=CHM13_chrY_T0001641;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001641;transcript_name=CHM13_chrY_T0001641;gene_name=ENSG00000288049;ID=intron:CHM13_chrY_T0001641:1;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20661755	20666528	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=CHM13_chrY_T0001641;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001641;transcript_name=CHM13_chrY_T0001641;gene_name=ENSG00000288049;ID=exon:CHM13_chrY_T0001641:2;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20651538	20661247	1000	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=CHM13_chrY_T0001642;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_G0000541;transcript_name=CHM13_chrY_T0001642;gene_name=ENSG00000288049;ID=CHM13_chrY_T0001642;Name=ENSG00000288049
CHM13_chrY	CAT	exon	20651538	20651748	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=CHM13_chrY_T0001642;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001642;transcript_name=CHM13_chrY_T0001642;gene_name=ENSG00000288049;ID=exon:CHM13_chrY_T0001642:0;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20651749	20661175	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=CHM13_chrY_T0001642;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001642;transcript_name=CHM13_chrY_T0001642;gene_name=ENSG00000288049;ID=intron:CHM13_chrY_T0001642:0;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20661176	20661247	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=CHM13_chrY_T0001642;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001642;transcript_name=CHM13_chrY_T0001642;gene_name=ENSG00000288049;ID=exon:CHM13_chrY_T0001642:1;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	20651551	20661845	1000	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=CHM13_chrY_T0001643;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_G0000541;transcript_name=CHM13_chrY_T0001643;gene_name=ENSG00000288049;ID=CHM13_chrY_T0001643;Name=ENSG00000288049
CHM13_chrY	CAT	exon	20651551	20651748	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=CHM13_chrY_T0001643;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001643;transcript_name=CHM13_chrY_T0001643;gene_name=ENSG00000288049;ID=exon:CHM13_chrY_T0001643:0;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20651749	20661276	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=CHM13_chrY_T0001643;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001643;transcript_name=CHM13_chrY_T0001643;gene_name=ENSG00000288049;ID=intron:CHM13_chrY_T0001643:0;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20661277	20661365	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=CHM13_chrY_T0001643;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001643;transcript_name=CHM13_chrY_T0001643;gene_name=ENSG00000288049;ID=exon:CHM13_chrY_T0001643:1;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20661366	20661754	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=CHM13_chrY_T0001643;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001643;transcript_name=CHM13_chrY_T0001643;gene_name=ENSG00000288049;ID=intron:CHM13_chrY_T0001643:1;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20661755	20661845	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=CHM13_chrY_T0001643;gene_id=CHM13_chrY_G0000541;Parent=CHM13_chrY_T0001643;transcript_name=CHM13_chrY_T0001643;gene_name=ENSG00000288049;ID=exon:CHM13_chrY_T0001643:2;Name=ENSG00000288049;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20775390	20790705	.	+	.	source_gene_common_name=ENSG00000300595;source_gene=ENSG00000300595.1;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;gene_id=CHM13_chrY_G0000542;gene_biotype=lncRNA;gene_name=ENSG00000300595;gene_sources=liftoff;ID=CHM13_chrY_G0000542;Name=ENSG00000300595
CHM13_chrY	CAT	transcript	20775390	20790705	1000	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=CHM13_chrY_T0001644;gene_id=CHM13_chrY_G0000542;Parent=CHM13_chrY_G0000542;transcript_name=CHM13_chrY_T0001644;gene_name=ENSG00000300595;ID=CHM13_chrY_T0001644;Name=ENSG00000300595
CHM13_chrY	CAT	exon	20775390	20775651	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=CHM13_chrY_T0001644;gene_id=CHM13_chrY_G0000542;Parent=CHM13_chrY_T0001644;transcript_name=CHM13_chrY_T0001644;gene_name=ENSG00000300595;ID=exon:CHM13_chrY_T0001644:0;Name=ENSG00000300595;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20775652	20790271	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=CHM13_chrY_T0001644;gene_id=CHM13_chrY_G0000542;Parent=CHM13_chrY_T0001644;transcript_name=CHM13_chrY_T0001644;gene_name=ENSG00000300595;ID=intron:CHM13_chrY_T0001644:0;Name=ENSG00000300595;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20790272	20790705	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=CHM13_chrY_T0001644;gene_id=CHM13_chrY_G0000542;Parent=CHM13_chrY_T0001644;transcript_name=CHM13_chrY_T0001644;gene_name=ENSG00000300595;ID=exon:CHM13_chrY_T0001644:1;Name=ENSG00000300595;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20838672	20839042	.	-	.	source_gene_common_name=ENSG00000274837;source_gene=ENSG00000274837.1;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;gene_id=CHM13_chrY_G0000543;gene_biotype=processed_pseudogene;gene_name=ENSG00000274837;gene_sources=liftoff;ID=CHM13_chrY_G0000543;Name=ENSG00000274837
CHM13_chrY	CAT	transcript	20838672	20839042	1000	-	.	source_transcript=ENST00000616477.1;source_transcript_name=ENST00000616477;source_gene=ENSG00000274837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616477.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616477.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274837;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;transcript_id=CHM13_chrY_T0001645;gene_id=CHM13_chrY_G0000543;Parent=CHM13_chrY_G0000543;transcript_name=CHM13_chrY_T0001645;gene_name=ENSG00000274837;ID=CHM13_chrY_T0001645;Name=ENSG00000274837
CHM13_chrY	CAT	exon	20838672	20839042	.	-	.	source_transcript=ENST00000616477.1;source_transcript_name=ENST00000616477;source_gene=ENSG00000274837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616477.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274837;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;transcript_id=CHM13_chrY_T0001645;gene_id=CHM13_chrY_G0000543;Parent=CHM13_chrY_T0001645;transcript_name=CHM13_chrY_T0001645;gene_name=ENSG00000274837;ID=exon:CHM13_chrY_T0001645:0;Name=ENSG00000274837;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20893112	20894389	.	-	.	source_gene_common_name=RCC2P2;source_gene=ENSG00000237997.1;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;gene_id=CHM13_chrY_G0000544;gene_biotype=processed_pseudogene;gene_name=RCC2P2;gene_sources=liftoff;ID=CHM13_chrY_G0000544;Name=RCC2P2
CHM13_chrY	CAT	transcript	20893112	20894389	1000	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=CHM13_chrY_T0001646;gene_id=CHM13_chrY_G0000544;Parent=CHM13_chrY_G0000544;transcript_name=CHM13_chrY_T0001646;gene_name=RCC2P2;ID=CHM13_chrY_T0001646;Name=RCC2P2
CHM13_chrY	CAT	exon	20893112	20893241	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=CHM13_chrY_T0001646;gene_id=CHM13_chrY_G0000544;Parent=CHM13_chrY_T0001646;transcript_name=CHM13_chrY_T0001646;gene_name=RCC2P2;ID=exon:CHM13_chrY_T0001646:0;Name=RCC2P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20893242	20893601	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=CHM13_chrY_T0001646;gene_id=CHM13_chrY_G0000544;Parent=CHM13_chrY_T0001646;transcript_name=CHM13_chrY_T0001646;gene_name=RCC2P2;ID=intron:CHM13_chrY_T0001646:0;Name=RCC2P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20893602	20894389	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=CHM13_chrY_T0001646;gene_id=CHM13_chrY_G0000544;Parent=CHM13_chrY_T0001646;transcript_name=CHM13_chrY_T0001646;gene_name=RCC2P2;ID=exon:CHM13_chrY_T0001646:1;Name=RCC2P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	20907722	20918741	.	-	.	source_gene_common_name=ZNF886P;source_gene=ENSG00000232522.1;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;gene_id=CHM13_chrY_G0000545;gene_biotype=unprocessed_pseudogene;gene_name=ZNF886P;gene_sources=liftoff;ID=CHM13_chrY_G0000545;Name=ZNF886P
CHM13_chrY	CAT	transcript	20907722	20918741	1000	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=CHM13_chrY_T0001647;gene_id=CHM13_chrY_G0000545;Parent=CHM13_chrY_G0000545;transcript_name=CHM13_chrY_T0001647;gene_name=ZNF886P;ID=CHM13_chrY_T0001647;Name=ZNF886P
CHM13_chrY	CAT	exon	20907722	20908236	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=CHM13_chrY_T0001647;gene_id=CHM13_chrY_G0000545;Parent=CHM13_chrY_T0001647;transcript_name=CHM13_chrY_T0001647;gene_name=ZNF886P;ID=exon:CHM13_chrY_T0001647:0;Name=ZNF886P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20908237	20912278	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=CHM13_chrY_T0001647;gene_id=CHM13_chrY_G0000545;Parent=CHM13_chrY_T0001647;transcript_name=CHM13_chrY_T0001647;gene_name=ZNF886P;ID=intron:CHM13_chrY_T0001647:0;Name=ZNF886P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20912279	20912367	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=CHM13_chrY_T0001647;gene_id=CHM13_chrY_G0000545;Parent=CHM13_chrY_T0001647;transcript_name=CHM13_chrY_T0001647;gene_name=ZNF886P;ID=exon:CHM13_chrY_T0001647:1;Name=ZNF886P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	20912368	20918622	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=CHM13_chrY_T0001647;gene_id=CHM13_chrY_G0000545;Parent=CHM13_chrY_T0001647;transcript_name=CHM13_chrY_T0001647;gene_name=ZNF886P;ID=intron:CHM13_chrY_T0001647:1;Name=ZNF886P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	20918623	20918741	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=CHM13_chrY_T0001647;gene_id=CHM13_chrY_G0000545;Parent=CHM13_chrY_T0001647;transcript_name=CHM13_chrY_T0001647;gene_name=ZNF886P;ID=exon:CHM13_chrY_T0001647:2;Name=ZNF886P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	21265265	21272010	.	+	.	source_gene_common_name=ZNF885P;source_gene=ENSG00000228764.1;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;gene_id=CHM13_chrY_G0000546;gene_biotype=processed_pseudogene;gene_name=ZNF885P;gene_sources=liftoff;ID=CHM13_chrY_G0000546;Name=ZNF885P
CHM13_chrY	CAT	transcript	21265265	21272010	1000	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=CHM13_chrY_T0001648;gene_id=CHM13_chrY_G0000546;Parent=CHM13_chrY_G0000546;transcript_name=CHM13_chrY_T0001648;gene_name=ZNF885P;ID=CHM13_chrY_T0001648;Name=ZNF885P
CHM13_chrY	CAT	exon	21265265	21265324	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=CHM13_chrY_T0001648;gene_id=CHM13_chrY_G0000546;Parent=CHM13_chrY_T0001648;transcript_name=CHM13_chrY_T0001648;gene_name=ZNF885P;ID=exon:CHM13_chrY_T0001648:0;Name=ZNF885P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21265325	21270721	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=CHM13_chrY_T0001648;gene_id=CHM13_chrY_G0000546;Parent=CHM13_chrY_T0001648;transcript_name=CHM13_chrY_T0001648;gene_name=ZNF885P;ID=intron:CHM13_chrY_T0001648:0;Name=ZNF885P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21270722	21271233	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=CHM13_chrY_T0001648;gene_id=CHM13_chrY_G0000546;Parent=CHM13_chrY_T0001648;transcript_name=CHM13_chrY_T0001648;gene_name=ZNF885P;ID=exon:CHM13_chrY_T0001648:1;Name=ZNF885P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21271234	21271484	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=CHM13_chrY_T0001648;gene_id=CHM13_chrY_G0000546;Parent=CHM13_chrY_T0001648;transcript_name=CHM13_chrY_T0001648;gene_name=ZNF885P;ID=intron:CHM13_chrY_T0001648:1;Name=ZNF885P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21271485	21272010	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=CHM13_chrY_T0001648;gene_id=CHM13_chrY_G0000546;Parent=CHM13_chrY_T0001648;transcript_name=CHM13_chrY_T0001648;gene_name=ZNF885P;ID=exon:CHM13_chrY_T0001648:2;Name=ZNF885P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	21340130	21450724	.	-	.	source_gene_common_name=TTTY10;source_gene=ENSG00000229236.4;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;gene_id=CHM13_chrY_G0000547;gene_biotype=lncRNA;gene_name=TTTY10;gene_sources=liftoff;ID=CHM13_chrY_G0000547;Name=TTTY10
CHM13_chrY	CAT	transcript	21340130	21450702	1000	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=CHM13_chrY_T0001649;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001649;gene_name=TTTY10;ID=CHM13_chrY_T0001649;Name=TTTY10
CHM13_chrY	CAT	exon	21340130	21341036	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=CHM13_chrY_T0001649;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001649;transcript_name=CHM13_chrY_T0001649;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001649:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341037	21341641	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=CHM13_chrY_T0001649;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001649;transcript_name=CHM13_chrY_T0001649;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001649:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21341642	21341881	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=CHM13_chrY_T0001649;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001649;transcript_name=CHM13_chrY_T0001649;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001649:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341882	21343402	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=CHM13_chrY_T0001649;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001649;transcript_name=CHM13_chrY_T0001649;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001649:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21343403	21343462	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=CHM13_chrY_T0001649;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001649;transcript_name=CHM13_chrY_T0001649;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001649:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21343463	21382555	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=CHM13_chrY_T0001649;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001649;transcript_name=CHM13_chrY_T0001649;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001649:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21382556	21382660	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=CHM13_chrY_T0001649;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001649;transcript_name=CHM13_chrY_T0001649;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001649:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21450310	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=CHM13_chrY_T0001649;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001649;transcript_name=CHM13_chrY_T0001649;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001649:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450702	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=CHM13_chrY_T0001649;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001649;transcript_name=CHM13_chrY_T0001649;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001649:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21340130	21450720	1000	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=CHM13_chrY_T0001650;Name=TTTY10
CHM13_chrY	CAT	exon	21340130	21341036	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001650:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341037	21341641	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001650:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21341642	21341881	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001650:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341882	21343402	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001650:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21343403	21343462	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001650:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21343463	21345085	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001650:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21345086	21345195	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001650:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21345196	21382555	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001650:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21382556	21382660	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001650:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21393474	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001650:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21393475	21393533	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001650:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21393534	21394239	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001650:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21394240	21394437	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001650:6;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21394438	21396335	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001650:6;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21396336	21396504	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001650:7;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21396505	21399471	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001650:7;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21399472	21399644	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001650:8;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21399645	21450310	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001650:8;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450720	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=CHM13_chrY_T0001650;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001650;transcript_name=CHM13_chrY_T0001650;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001650:9;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21340130	21450702	1000	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=CHM13_chrY_T0001651;Name=TTTY10
CHM13_chrY	CAT	exon	21340130	21341036	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001651:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341037	21341641	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001651:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21341642	21341881	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001651:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341882	21343402	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001651:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21343403	21343462	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001651:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21343463	21345085	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001651:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21345086	21345195	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001651:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21345196	21382555	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001651:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21382556	21382660	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001651:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21396335	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001651:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21396336	21396504	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001651:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21396505	21399471	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001651:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21399472	21399644	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001651:6;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21399645	21450310	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001651:6;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450702	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=CHM13_chrY_T0001651;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001651;transcript_name=CHM13_chrY_T0001651;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001651:7;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21340203	21450427	1000	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=CHM13_chrY_T0001652;Name=TTTY10
CHM13_chrY	CAT	exon	21340203	21341036	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001652:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341037	21341641	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001652:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21341642	21341881	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001652:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341882	21343402	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001652:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21343403	21343462	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001652:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21343463	21345085	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001652:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21345086	21345195	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001652:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21345196	21382555	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001652:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21382556	21382660	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001652:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21393474	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001652:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21393475	21393533	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001652:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21393534	21394239	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001652:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21394240	21394437	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001652:6;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21394438	21396335	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001652:6;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21396336	21396504	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001652:7;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21396505	21450310	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001652:7;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450427	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=CHM13_chrY_T0001652;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001652;transcript_name=CHM13_chrY_T0001652;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001652:8;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21340294	21450461	1000	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=CHM13_chrY_T0001653;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001653;gene_name=TTTY10;ID=CHM13_chrY_T0001653;Name=TTTY10
CHM13_chrY	CAT	exon	21340294	21341036	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=CHM13_chrY_T0001653;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001653;transcript_name=CHM13_chrY_T0001653;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001653:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341037	21341641	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=CHM13_chrY_T0001653;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001653;transcript_name=CHM13_chrY_T0001653;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001653:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21341642	21341881	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=CHM13_chrY_T0001653;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001653;transcript_name=CHM13_chrY_T0001653;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001653:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341882	21343402	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=CHM13_chrY_T0001653;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001653;transcript_name=CHM13_chrY_T0001653;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001653:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21343403	21343462	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=CHM13_chrY_T0001653;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001653;transcript_name=CHM13_chrY_T0001653;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001653:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21343463	21345085	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=CHM13_chrY_T0001653;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001653;transcript_name=CHM13_chrY_T0001653;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001653:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21345086	21345195	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=CHM13_chrY_T0001653;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001653;transcript_name=CHM13_chrY_T0001653;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001653:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21345196	21382555	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=CHM13_chrY_T0001653;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001653;transcript_name=CHM13_chrY_T0001653;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001653:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21382556	21382660	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=CHM13_chrY_T0001653;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001653;transcript_name=CHM13_chrY_T0001653;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001653:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21450310	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=CHM13_chrY_T0001653;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001653;transcript_name=CHM13_chrY_T0001653;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001653:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450461	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=CHM13_chrY_T0001653;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001653;transcript_name=CHM13_chrY_T0001653;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001653:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21340530	21450567	1000	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=CHM13_chrY_T0001654;Name=TTTY10
CHM13_chrY	CAT	exon	21340530	21341036	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001654:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341037	21341641	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001654:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21341642	21341881	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001654:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341882	21343402	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001654:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21343403	21343462	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001654:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21343463	21345085	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001654:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21345086	21345195	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001654:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21345196	21382555	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001654:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21382556	21382660	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001654:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21393474	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001654:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21393475	21393533	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001654:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21393534	21394091	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001654:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21394092	21394204	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001654:6;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21394205	21396335	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001654:6;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21396336	21396504	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001654:7;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21396505	21399471	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001654:7;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21399472	21399644	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001654:8;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21399645	21440272	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001654:8;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21440273	21440396	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001654:9;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21440397	21450310	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001654:9;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450567	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=CHM13_chrY_T0001654;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001654;transcript_name=CHM13_chrY_T0001654;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001654:10;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21340578	21450461	1000	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=CHM13_chrY_T0001655;Name=TTTY10
CHM13_chrY	CAT	exon	21340578	21341036	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001655;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001655:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341037	21341641	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001655;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001655:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21341642	21341881	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001655;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001655:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341882	21343402	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001655;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001655:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21343403	21343462	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001655;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001655:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21343463	21382555	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001655;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001655:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21382556	21382660	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001655;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001655:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21396335	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001655;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001655:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21396336	21396504	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001655;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001655:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21396505	21399471	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001655;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001655:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21399472	21399644	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001655;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001655:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21399645	21450310	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001655;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001655:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450461	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=CHM13_chrY_T0001655;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001655;transcript_name=CHM13_chrY_T0001655;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001655:6;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21340882	21394432	1000	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=CHM13_chrY_T0001656;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001656;gene_name=TTTY10;ID=CHM13_chrY_T0001656;Name=TTTY10
CHM13_chrY	CAT	exon	21340882	21341036	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=CHM13_chrY_T0001656;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001656;transcript_name=CHM13_chrY_T0001656;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001656:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341037	21341641	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=CHM13_chrY_T0001656;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001656;transcript_name=CHM13_chrY_T0001656;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001656:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21341642	21341881	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=CHM13_chrY_T0001656;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001656;transcript_name=CHM13_chrY_T0001656;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001656:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341882	21343402	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=CHM13_chrY_T0001656;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001656;transcript_name=CHM13_chrY_T0001656;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001656:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21343403	21343462	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=CHM13_chrY_T0001656;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001656;transcript_name=CHM13_chrY_T0001656;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001656:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21343463	21345085	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=CHM13_chrY_T0001656;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001656;transcript_name=CHM13_chrY_T0001656;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001656:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21345086	21345195	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=CHM13_chrY_T0001656;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001656;transcript_name=CHM13_chrY_T0001656;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001656:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21345196	21382555	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=CHM13_chrY_T0001656;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001656;transcript_name=CHM13_chrY_T0001656;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001656:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21382556	21382660	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=CHM13_chrY_T0001656;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001656;transcript_name=CHM13_chrY_T0001656;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001656:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21393474	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=CHM13_chrY_T0001656;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001656;transcript_name=CHM13_chrY_T0001656;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001656:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21393475	21394432	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=CHM13_chrY_T0001656;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001656;transcript_name=CHM13_chrY_T0001656;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001656:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21341389	21450696	1000	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=CHM13_chrY_T0001657;Name=TTTY10
CHM13_chrY	CAT	exon	21341389	21341881	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001657:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341882	21343402	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001657:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21343403	21343462	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001657:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21343463	21345085	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001657:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21345086	21345195	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001657:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21345196	21382555	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001657:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21382556	21382660	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001657:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21393474	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001657:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21393475	21393533	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001657:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21393534	21394091	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001657:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21394092	21394204	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001657:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21394205	21396335	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001657:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21396336	21396504	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001657:6;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21396505	21399471	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001657:6;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21399472	21399644	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001657:7;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21399645	21450310	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001657:7;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450696	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=CHM13_chrY_T0001657;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001657;transcript_name=CHM13_chrY_T0001657;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001657:8;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21341706	21346358	1000	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=CHM13_chrY_T0001658;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001658;gene_name=TTTY10;ID=CHM13_chrY_T0001658;Name=TTTY10
CHM13_chrY	CAT	exon	21341706	21341881	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=CHM13_chrY_T0001658;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001658;transcript_name=CHM13_chrY_T0001658;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001658:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21341882	21343402	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=CHM13_chrY_T0001658;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001658;transcript_name=CHM13_chrY_T0001658;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001658:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21343403	21343462	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=CHM13_chrY_T0001658;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001658;transcript_name=CHM13_chrY_T0001658;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001658:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21343463	21345085	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=CHM13_chrY_T0001658;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001658;transcript_name=CHM13_chrY_T0001658;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001658:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21345086	21345195	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=CHM13_chrY_T0001658;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001658;transcript_name=CHM13_chrY_T0001658;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001658:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21345196	21345974	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=CHM13_chrY_T0001658;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001658;transcript_name=CHM13_chrY_T0001658;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001658:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21345975	21346358	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=CHM13_chrY_T0001658;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001658;transcript_name=CHM13_chrY_T0001658;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001658:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21378413	21450536	1000	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=CHM13_chrY_T0001659;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001659;gene_name=TTTY10;ID=CHM13_chrY_T0001659;Name=TTTY10
CHM13_chrY	CAT	exon	21378413	21382660	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=CHM13_chrY_T0001659;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001659;transcript_name=CHM13_chrY_T0001659;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001659:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21450310	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=CHM13_chrY_T0001659;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001659;transcript_name=CHM13_chrY_T0001659;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001659:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450536	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=CHM13_chrY_T0001659;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001659;transcript_name=CHM13_chrY_T0001659;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001659:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21379680	21394060	1000	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=CHM13_chrY_T0001660;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001660;gene_name=TTTY10;ID=CHM13_chrY_T0001660;Name=TTTY10
CHM13_chrY	CAT	exon	21379680	21382660	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=CHM13_chrY_T0001660;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001660;transcript_name=CHM13_chrY_T0001660;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001660:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21393474	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=CHM13_chrY_T0001660;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001660;transcript_name=CHM13_chrY_T0001660;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001660:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21393475	21394060	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=CHM13_chrY_T0001660;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001660;transcript_name=CHM13_chrY_T0001660;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001660:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21381971	21450350	1000	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=CHM13_chrY_T0001661;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001661;gene_name=TTTY10;ID=CHM13_chrY_T0001661;Name=TTTY10
CHM13_chrY	CAT	exon	21381971	21382660	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=CHM13_chrY_T0001661;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001661;transcript_name=CHM13_chrY_T0001661;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001661:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21394239	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=CHM13_chrY_T0001661;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001661;transcript_name=CHM13_chrY_T0001661;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001661:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21394240	21394437	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=CHM13_chrY_T0001661;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001661;transcript_name=CHM13_chrY_T0001661;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001661:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21394438	21396335	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=CHM13_chrY_T0001661;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001661;transcript_name=CHM13_chrY_T0001661;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001661:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21396336	21396504	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=CHM13_chrY_T0001661;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001661;transcript_name=CHM13_chrY_T0001661;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001661:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21396505	21399471	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=CHM13_chrY_T0001661;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001661;transcript_name=CHM13_chrY_T0001661;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001661:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21399472	21399644	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=CHM13_chrY_T0001661;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001661;transcript_name=CHM13_chrY_T0001661;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001661:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21399645	21450310	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=CHM13_chrY_T0001661;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001661;transcript_name=CHM13_chrY_T0001661;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001661:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450350	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=CHM13_chrY_T0001661;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001661;transcript_name=CHM13_chrY_T0001661;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001661:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21381973	21450724	1000	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=CHM13_chrY_T0001662;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001662;gene_name=TTTY10;ID=CHM13_chrY_T0001662;Name=TTTY10
CHM13_chrY	CAT	exon	21381973	21382660	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=CHM13_chrY_T0001662;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001662;transcript_name=CHM13_chrY_T0001662;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001662:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21394239	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=CHM13_chrY_T0001662;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001662;transcript_name=CHM13_chrY_T0001662;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001662:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21394240	21394437	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=CHM13_chrY_T0001662;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001662;transcript_name=CHM13_chrY_T0001662;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001662:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21394438	21396335	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=CHM13_chrY_T0001662;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001662;transcript_name=CHM13_chrY_T0001662;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001662:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21396336	21396504	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=CHM13_chrY_T0001662;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001662;transcript_name=CHM13_chrY_T0001662;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001662:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21396505	21450310	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=CHM13_chrY_T0001662;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001662;transcript_name=CHM13_chrY_T0001662;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001662:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450724	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=CHM13_chrY_T0001662;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001662;transcript_name=CHM13_chrY_T0001662;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001662:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21382286	21450350	1000	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=CHM13_chrY_T0001663;Name=TTTY10
CHM13_chrY	CAT	exon	21382286	21382660	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001663;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001663:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21382661	21393474	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001663;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001663:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21393475	21393533	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001663;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001663:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21393534	21394091	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001663;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001663:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21394092	21394204	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001663;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001663:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21394205	21396335	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001663;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001663:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21396336	21396504	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001663;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001663:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21396505	21399471	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001663;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001663:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21399472	21399644	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001663;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001663:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21399645	21402398	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001663;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001663:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21402399	21402490	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001663;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001663:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21402491	21450310	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001663;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001663:5;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450350	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=CHM13_chrY_T0001663;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001663;transcript_name=CHM13_chrY_T0001663;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001663:6;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21394314	21450688	1000	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=CHM13_chrY_T0001664;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001664;gene_name=TTTY10;ID=CHM13_chrY_T0001664;Name=TTTY10
CHM13_chrY	CAT	exon	21394314	21394437	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=CHM13_chrY_T0001664;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001664;transcript_name=CHM13_chrY_T0001664;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001664:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21394438	21396335	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=CHM13_chrY_T0001664;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001664;transcript_name=CHM13_chrY_T0001664;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001664:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21396336	21396504	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=CHM13_chrY_T0001664;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001664;transcript_name=CHM13_chrY_T0001664;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001664:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21396505	21399471	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=CHM13_chrY_T0001664;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001664;transcript_name=CHM13_chrY_T0001664;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001664:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21399472	21399644	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=CHM13_chrY_T0001664;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001664;transcript_name=CHM13_chrY_T0001664;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001664:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21399645	21402398	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=CHM13_chrY_T0001664;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001664;transcript_name=CHM13_chrY_T0001664;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001664:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21402399	21402490	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=CHM13_chrY_T0001664;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001664;transcript_name=CHM13_chrY_T0001664;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001664:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21402491	21450310	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=CHM13_chrY_T0001664;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001664;transcript_name=CHM13_chrY_T0001664;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001664:3;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450688	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=CHM13_chrY_T0001664;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001664;transcript_name=CHM13_chrY_T0001664;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001664:4;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21395916	21450702	1000	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=CHM13_chrY_T0001665;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001665;gene_name=TTTY10;ID=CHM13_chrY_T0001665;Name=TTTY10
CHM13_chrY	CAT	exon	21395916	21396504	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=CHM13_chrY_T0001665;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001665;transcript_name=CHM13_chrY_T0001665;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001665:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21396505	21399471	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=CHM13_chrY_T0001665;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001665;transcript_name=CHM13_chrY_T0001665;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001665:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21399472	21399644	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=CHM13_chrY_T0001665;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001665;transcript_name=CHM13_chrY_T0001665;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001665:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21399645	21450310	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=CHM13_chrY_T0001665;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001665;transcript_name=CHM13_chrY_T0001665;gene_name=TTTY10;ID=intron:CHM13_chrY_T0001665:1;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21450311	21450702	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=CHM13_chrY_T0001665;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001665;transcript_name=CHM13_chrY_T0001665;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001665:2;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21450137	21450688	1000	-	.	source_transcript=ENST00000755220.1;source_transcript_name=TTTY10-218;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755220.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755220.1,ENST00000755220.1;transcript_id=CHM13_chrY_T0001667;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_G0000547;transcript_name=CHM13_chrY_T0001667;gene_name=TTTY10;ID=CHM13_chrY_T0001667;Name=TTTY10
CHM13_chrY	CAT	exon	21450137	21450688	.	-	.	source_transcript=ENST00000755220.1;source_transcript_name=TTTY10-218;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755220.1,ENST00000755220.1;transcript_id=CHM13_chrY_T0001667;gene_id=CHM13_chrY_G0000547;Parent=CHM13_chrY_T0001667;transcript_name=CHM13_chrY_T0001667;gene_name=TTTY10;ID=exon:CHM13_chrY_T0001667:0;Name=TTTY10;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	21445427	21445724	.	-	.	source_gene_common_name=KDM5DP1;source_gene=ENSG00000277438.1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;gene_id=CHM13_chrY_G0000548;gene_biotype=processed_pseudogene;gene_name=KDM5DP1;gene_sources=liftoff;ID=CHM13_chrY_G0000548;Name=KDM5DP1
CHM13_chrY	CAT	transcript	21445427	21445724	1000	-	.	source_transcript=ENST00000622542.1;source_transcript_name=KDM5DP1-201;source_gene=ENSG00000277438.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000277438.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622542.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622542.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5DP1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;transcript_id=CHM13_chrY_T0001666;gene_id=CHM13_chrY_G0000548;Parent=CHM13_chrY_G0000548;transcript_name=CHM13_chrY_T0001666;gene_name=KDM5DP1;ID=CHM13_chrY_T0001666;Name=KDM5DP1
CHM13_chrY	CAT	exon	21445427	21445724	.	-	.	source_transcript=ENST00000622542.1;source_transcript_name=KDM5DP1-201;source_gene=ENSG00000277438.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000277438.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622542.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622542.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5DP1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;transcript_id=CHM13_chrY_T0001666;gene_id=CHM13_chrY_G0000548;Parent=CHM13_chrY_T0001666;transcript_name=CHM13_chrY_T0001666;gene_name=KDM5DP1;ID=exon:CHM13_chrY_T0001666:0;Name=KDM5DP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	21450981	21468360	.	+	.	source_gene_common_name=EIF1AY;source_gene=ENSG00000198692.10;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;gene_id=CHM13_chrY_G0000549;gene_biotype=protein_coding;gene_name=EIF1AY;gene_sources=liftoff;ID=CHM13_chrY_G0000549;Name=EIF1AY
CHM13_chrY	CAT	transcript	21450981	21468360	100	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_G0000549;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=CHM13_chrY_T0001668;Name=EIF1AY
CHM13_chrY	CAT	exon	21450981	21451092	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001668:0;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21451077	21451092	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=CDS:CHM13_chrY_T0001668:0;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	21451077	21451079	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=start_codon:CHM13_chrY_T0001668;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21451093	21454812	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001668:0;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21454813	21454896	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001668:1;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21454813	21454896	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=CDS:CHM13_chrY_T0001668:1;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21454897	21457794	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001668:1;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21457795	21457898	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001668:2;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21457795	21457898	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=CDS:CHM13_chrY_T0001668:2;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21457899	21459679	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001668:2;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21459680	21459730	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001668:3;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21459680	21459730	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=CDS:CHM13_chrY_T0001668:3;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21459731	21463229	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001668:3;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21463230	21463311	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001668:4;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21463230	21463311	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=CDS:CHM13_chrY_T0001668:4;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21463312	21464689	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001668:4;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21464690	21464781	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001668:5;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21464690	21464781	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=CDS:CHM13_chrY_T0001668:5;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21464782	21467546	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001668:5;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21467547	21468360	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001668:6;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21467547	21467552	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=CDS:CHM13_chrY_T0001668:6;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	21467550	21467552	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=CHM13_chrY_T0001668;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001668;transcript_name=CHM13_chrY_T0001668;gene_name=EIF1AY;ID=stop_codon:CHM13_chrY_T0001668;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21450983	21463735	1000	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=CHM13_chrY_T0001669;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_G0000549;transcript_name=CHM13_chrY_T0001669;gene_name=EIF1AY;ID=CHM13_chrY_T0001669;Name=EIF1AY
CHM13_chrY	CAT	exon	21450983	21451092	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=CHM13_chrY_T0001669;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001669;transcript_name=CHM13_chrY_T0001669;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001669:0;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21451093	21454812	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=CHM13_chrY_T0001669;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001669;transcript_name=CHM13_chrY_T0001669;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001669:0;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21454813	21454896	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=CHM13_chrY_T0001669;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001669;transcript_name=CHM13_chrY_T0001669;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001669:1;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21454897	21457794	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=CHM13_chrY_T0001669;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001669;transcript_name=CHM13_chrY_T0001669;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001669:1;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21457795	21457898	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=CHM13_chrY_T0001669;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001669;transcript_name=CHM13_chrY_T0001669;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001669:2;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21457899	21459679	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=CHM13_chrY_T0001669;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001669;transcript_name=CHM13_chrY_T0001669;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001669:2;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21459680	21459730	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=CHM13_chrY_T0001669;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001669;transcript_name=CHM13_chrY_T0001669;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001669:3;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21459731	21463229	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=CHM13_chrY_T0001669;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001669;transcript_name=CHM13_chrY_T0001669;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001669:3;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21463230	21463735	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=CHM13_chrY_T0001669;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001669;transcript_name=CHM13_chrY_T0001669;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001669:4;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21450999	21467836	100	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_G0000549;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=CHM13_chrY_T0001670;Name=EIF1AY
CHM13_chrY	CAT	exon	21450999	21451092	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001670:0;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21451077	21451092	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=CDS:CHM13_chrY_T0001670:0;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	21451077	21451079	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=start_codon:CHM13_chrY_T0001670;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21451093	21454812	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001670:0;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21454813	21454896	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001670:1;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21454813	21454896	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=CDS:CHM13_chrY_T0001670:1;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21454897	21457794	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001670:1;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21457795	21457898	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001670:2;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21457795	21457898	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=CDS:CHM13_chrY_T0001670:2;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21457899	21463229	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001670:2;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21463230	21463311	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001670:3;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21463230	21463311	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=CDS:CHM13_chrY_T0001670:3;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21463312	21464689	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001670:3;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21464690	21464781	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001670:4;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21464690	21464781	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=CDS:CHM13_chrY_T0001670:4;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21464782	21467546	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001670:4;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21467547	21467836	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001670:5;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21467547	21467552	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=CDS:CHM13_chrY_T0001670:5;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	21467550	21467552	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=CHM13_chrY_T0001670;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001670;transcript_name=CHM13_chrY_T0001670;gene_name=EIF1AY;ID=stop_codon:CHM13_chrY_T0001670;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21461924	21467836	1000	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=299.93600000000004;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=CHM13_chrY_T0001671;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_G0000549;transcript_name=CHM13_chrY_T0001671;gene_name=EIF1AY;ID=CHM13_chrY_T0001671;Name=EIF1AY
CHM13_chrY	CAT	exon	21461924	21464781	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=299.93600000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=CHM13_chrY_T0001671;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001671;transcript_name=CHM13_chrY_T0001671;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001671:0;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21464782	21467546	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=299.93600000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=CHM13_chrY_T0001671;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001671;transcript_name=CHM13_chrY_T0001671;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001671:0;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21467547	21467836	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=299.93600000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=CHM13_chrY_T0001671;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001671;transcript_name=CHM13_chrY_T0001671;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001671:1;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21463053	21467836	1000	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=299.844;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=CHM13_chrY_T0001672;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_G0000549;transcript_name=CHM13_chrY_T0001672;gene_name=EIF1AY;ID=CHM13_chrY_T0001672;Name=EIF1AY
CHM13_chrY	CAT	exon	21463053	21463311	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=CHM13_chrY_T0001672;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001672;transcript_name=CHM13_chrY_T0001672;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001672:0;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21463312	21464689	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=CHM13_chrY_T0001672;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001672;transcript_name=CHM13_chrY_T0001672;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001672:0;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21464690	21464781	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=CHM13_chrY_T0001672;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001672;transcript_name=CHM13_chrY_T0001672;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001672:1;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21464782	21467546	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=CHM13_chrY_T0001672;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001672;transcript_name=CHM13_chrY_T0001672;gene_name=EIF1AY;ID=intron:CHM13_chrY_T0001672:1;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21467547	21467836	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=299.844;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=CHM13_chrY_T0001672;gene_id=CHM13_chrY_G0000549;Parent=CHM13_chrY_T0001672;transcript_name=CHM13_chrY_T0001672;gene_name=EIF1AY;ID=exon:CHM13_chrY_T0001672:2;Name=EIF1AY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	21600556	21609747	.	-	.	source_gene_common_name=ENSG00000286247;source_gene=ENSG00000286247.2;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;gene_id=CHM13_chrY_G0000550;gene_biotype=lncRNA;gene_name=ENSG00000286247;gene_sources=liftoff;ID=CHM13_chrY_G0000550;Name=ENSG00000286247
CHM13_chrY	CAT	transcript	21600556	21609747	1000	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=CHM13_chrY_T0001673;gene_id=CHM13_chrY_G0000550;Parent=CHM13_chrY_G0000550;transcript_name=CHM13_chrY_T0001673;gene_name=ENSG00000286247;ID=CHM13_chrY_T0001673;Name=ENSG00000286247
CHM13_chrY	CAT	exon	21600556	21601322	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=CHM13_chrY_T0001673;gene_id=CHM13_chrY_G0000550;Parent=CHM13_chrY_T0001673;transcript_name=CHM13_chrY_T0001673;gene_name=ENSG00000286247;ID=exon:CHM13_chrY_T0001673:0;Name=ENSG00000286247;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21601323	21609689	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=CHM13_chrY_T0001673;gene_id=CHM13_chrY_G0000550;Parent=CHM13_chrY_T0001673;transcript_name=CHM13_chrY_T0001673;gene_name=ENSG00000286247;ID=intron:CHM13_chrY_T0001673:0;Name=ENSG00000286247;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21609690	21609747	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=CHM13_chrY_T0001673;gene_id=CHM13_chrY_G0000550;Parent=CHM13_chrY_T0001673;transcript_name=CHM13_chrY_T0001673;gene_name=ENSG00000286247;ID=exon:CHM13_chrY_T0001673:1;Name=ENSG00000286247;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	21601027	21602505	1000	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=CHM13_chrY_T0001674;gene_id=CHM13_chrY_G0000550;Parent=CHM13_chrY_G0000550;transcript_name=CHM13_chrY_T0001674;gene_name=ENSG00000286247;ID=CHM13_chrY_T0001674;Name=ENSG00000286247
CHM13_chrY	CAT	exon	21601027	21601322	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=CHM13_chrY_T0001674;gene_id=CHM13_chrY_G0000550;Parent=CHM13_chrY_T0001674;transcript_name=CHM13_chrY_T0001674;gene_name=ENSG00000286247;ID=exon:CHM13_chrY_T0001674:0;Name=ENSG00000286247;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21601323	21602431	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=CHM13_chrY_T0001674;gene_id=CHM13_chrY_G0000550;Parent=CHM13_chrY_T0001674;transcript_name=CHM13_chrY_T0001674;gene_name=ENSG00000286247;ID=intron:CHM13_chrY_T0001674:0;Name=ENSG00000286247;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21602432	21602505	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=CHM13_chrY_T0001674;gene_id=CHM13_chrY_G0000550;Parent=CHM13_chrY_T0001674;transcript_name=CHM13_chrY_T0001674;gene_name=ENSG00000286247;ID=exon:CHM13_chrY_T0001674:1;Name=ENSG00000286247;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	21602479	21618121	.	+	.	source_gene_common_name=TBL1YP1;source_gene=ENSG00000225624.1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;gene_id=CHM13_chrY_G0000551;gene_biotype=unprocessed_pseudogene;gene_name=TBL1YP1;gene_sources=liftoff;ID=CHM13_chrY_G0000551;Name=TBL1YP1
CHM13_chrY	CAT	transcript	21602479	21618121	1000	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_G0000551;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=CHM13_chrY_T0001675;Name=TBL1YP1
CHM13_chrY	CAT	exon	21602479	21602722	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=exon:CHM13_chrY_T0001675:0;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21602723	21604625	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=intron:CHM13_chrY_T0001675:0;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21604626	21604756	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=exon:CHM13_chrY_T0001675:1;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21604757	21605147	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=intron:CHM13_chrY_T0001675:1;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21605148	21605295	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=exon:CHM13_chrY_T0001675:2;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21605296	21605993	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=intron:CHM13_chrY_T0001675:2;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21605994	21606057	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=exon:CHM13_chrY_T0001675:3;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21606058	21606166	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=intron:CHM13_chrY_T0001675:3;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21606167	21606265	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=exon:CHM13_chrY_T0001675:4;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21606266	21609303	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=intron:CHM13_chrY_T0001675:4;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21609304	21609371	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=exon:CHM13_chrY_T0001675:5;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21609372	21616120	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=intron:CHM13_chrY_T0001675:5;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21616121	21616194	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=exon:CHM13_chrY_T0001675:6;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21616195	21616531	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=intron:CHM13_chrY_T0001675:6;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21616532	21616656	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=exon:CHM13_chrY_T0001675:7;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21616657	21618048	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=intron:CHM13_chrY_T0001675:7;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21618049	21618121	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=CHM13_chrY_T0001675;gene_id=CHM13_chrY_G0000551;Parent=CHM13_chrY_T0001675;transcript_name=CHM13_chrY_T0001675;gene_name=TBL1YP1;ID=exon:CHM13_chrY_T0001675:8;Name=TBL1YP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	21631330	21656255	.	+	.	source_gene_common_name=RPS4Y2;source_gene=ENSG00000280969.2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;gene_id=CHM13_chrY_G0000552;gene_biotype=protein_coding;gene_name=RPS4Y2;gene_sources=liftoff;ID=CHM13_chrY_G0000552;Name=RPS4Y2
CHM13_chrY	CAT	transcript	21631330	21656255	100	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_G0000552;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=CHM13_chrY_T0001676;Name=RPS4Y2
CHM13_chrY	CAT	exon	21631330	21631388	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=exon:CHM13_chrY_T0001676:0;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21631386	21631388	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=CDS:CHM13_chrY_T0001676:0;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	21631386	21631388	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=start_codon:CHM13_chrY_T0001676;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21631389	21631999	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=intron:CHM13_chrY_T0001676:0;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21632000	21632077	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=exon:CHM13_chrY_T0001676:1;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21632000	21632077	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=CDS:CHM13_chrY_T0001676:1;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21632078	21635090	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=intron:CHM13_chrY_T0001676:1;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21635091	21635271	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=exon:CHM13_chrY_T0001676:2;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21635091	21635271	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=CDS:CHM13_chrY_T0001676:2;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21635272	21636506	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=intron:CHM13_chrY_T0001676:2;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21636507	21636604	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=exon:CHM13_chrY_T0001676:3;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21636507	21636604	.	+	2	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=CDS:CHM13_chrY_T0001676:3;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21636605	21644027	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=intron:CHM13_chrY_T0001676:3;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21644028	21644199	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=exon:CHM13_chrY_T0001676:4;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21644028	21644199	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=CDS:CHM13_chrY_T0001676:4;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21644200	21654731	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=intron:CHM13_chrY_T0001676:4;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21654732	21654889	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=exon:CHM13_chrY_T0001676:5;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21654732	21654889	.	+	2	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=CDS:CHM13_chrY_T0001676:5;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21654890	21656153	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=intron:CHM13_chrY_T0001676:5;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21656154	21656255	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=exon:CHM13_chrY_T0001676:6;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	21656154	21656255	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=CDS:CHM13_chrY_T0001676:6;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	21656253	21656255	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=CHM13_chrY_T0001676;gene_id=CHM13_chrY_G0000552;Parent=CHM13_chrY_T0001676;transcript_name=CHM13_chrY_T0001676;gene_name=RPS4Y2;ID=stop_codon:CHM13_chrY_T0001676;Name=RPS4Y2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	21683999	21687032	.	-	.	source_gene_common_name=HSFY4P;source_gene=ENSG00000224482.1;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;gene_id=CHM13_chrY_G0000553;gene_biotype=unprocessed_pseudogene;gene_name=HSFY4P;gene_sources=liftoff;ID=CHM13_chrY_G0000553;Name=HSFY4P
CHM13_chrY	CAT	transcript	21683999	21687032	1000	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=CHM13_chrY_T0001677;gene_id=CHM13_chrY_G0000553;Parent=CHM13_chrY_G0000553;transcript_name=CHM13_chrY_T0001677;gene_name=HSFY4P;ID=CHM13_chrY_T0001677;Name=HSFY4P
CHM13_chrY	CAT	exon	21683999	21684688	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=CHM13_chrY_T0001677;gene_id=CHM13_chrY_G0000553;Parent=CHM13_chrY_T0001677;transcript_name=CHM13_chrY_T0001677;gene_name=HSFY4P;ID=exon:CHM13_chrY_T0001677:0;Name=HSFY4P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21684689	21686541	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=CHM13_chrY_T0001677;gene_id=CHM13_chrY_G0000553;Parent=CHM13_chrY_T0001677;transcript_name=CHM13_chrY_T0001677;gene_name=HSFY4P;ID=intron:CHM13_chrY_T0001677:0;Name=HSFY4P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21686542	21687032	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=CHM13_chrY_T0001677;gene_id=CHM13_chrY_G0000553;Parent=CHM13_chrY_T0001677;transcript_name=CHM13_chrY_T0001677;gene_name=HSFY4P;ID=exon:CHM13_chrY_T0001677:1;Name=HSFY4P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	21718489	21718943	.	-	.	source_gene_common_name=ENSG00000216844;source_gene=ENSG00000216844.1;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;gene_id=CHM13_chrY_G0000554;gene_biotype=processed_pseudogene;gene_name=ENSG00000216844;gene_sources=liftoff;ID=CHM13_chrY_G0000554;Name=ENSG00000216844
CHM13_chrY	CAT	transcript	21718489	21718943	1000	-	.	source_transcript=ENST00000406090.1;source_transcript_name=ENST00000406090;source_gene=ENSG00000216844.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216844.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000406090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000406090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000216844;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;transcript_id=CHM13_chrY_T0001678;gene_id=CHM13_chrY_G0000554;Parent=CHM13_chrY_G0000554;transcript_name=CHM13_chrY_T0001678;gene_name=ENSG00000216844;ID=CHM13_chrY_T0001678;Name=ENSG00000216844
CHM13_chrY	CAT	exon	21718489	21718943	.	-	.	source_transcript=ENST00000406090.1;source_transcript_name=ENST00000406090;source_gene=ENSG00000216844.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216844.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000406090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000406090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000216844;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;transcript_id=CHM13_chrY_T0001678;gene_id=CHM13_chrY_G0000554;Parent=CHM13_chrY_T0001678;transcript_name=CHM13_chrY_T0001678;gene_name=ENSG00000216844;ID=exon:CHM13_chrY_T0001678:0;Name=ENSG00000216844;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	21736570	21737570	.	+	.	source_gene_common_name=GAPDHP17;source_gene=ENSG00000229551.2;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;gene_id=CHM13_chrY_G0000555;gene_biotype=processed_pseudogene;gene_name=GAPDHP17;gene_sources=liftoff;ID=CHM13_chrY_G0000555;Name=GAPDHP17
CHM13_chrY	CAT	transcript	21736570	21737570	1000	+	.	source_transcript=ENST00000449858.2;source_transcript_name=GAPDHP17-201;source_gene=ENSG00000229551.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229551.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000449858.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000449858.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP17;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;transcript_id=CHM13_chrY_T0001679;gene_id=CHM13_chrY_G0000555;Parent=CHM13_chrY_G0000555;transcript_name=CHM13_chrY_T0001679;gene_name=GAPDHP17;ID=CHM13_chrY_T0001679;Name=GAPDHP17
CHM13_chrY	CAT	exon	21736570	21737570	.	+	.	source_transcript=ENST00000449858.2;source_transcript_name=GAPDHP17-201;source_gene=ENSG00000229551.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229551.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000449858.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000449858.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP17;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;transcript_id=CHM13_chrY_T0001679;gene_id=CHM13_chrY_G0000555;Parent=CHM13_chrY_T0001679;transcript_name=CHM13_chrY_T0001679;gene_name=GAPDHP17;ID=exon:CHM13_chrY_T0001679:0;Name=GAPDHP17;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	21782575	21782793	.	-	.	source_gene_common_name=TMEM167AP1;source_gene=ENSG00000226504.1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;gene_id=CHM13_chrY_G0000556;gene_biotype=processed_pseudogene;gene_name=TMEM167AP1;gene_sources=liftoff;ID=CHM13_chrY_G0000556;Name=TMEM167AP1
CHM13_chrY	CAT	transcript	21782575	21782793	1000	-	.	source_transcript=ENST00000423409.1;source_transcript_name=TMEM167AP1-201;source_gene=ENSG00000226504.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226504.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423409.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMEM167AP1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;transcript_id=CHM13_chrY_T0001680;gene_id=CHM13_chrY_G0000556;Parent=CHM13_chrY_G0000556;transcript_name=CHM13_chrY_T0001680;gene_name=TMEM167AP1;ID=CHM13_chrY_T0001680;Name=TMEM167AP1
CHM13_chrY	CAT	exon	21782575	21782793	.	-	.	source_transcript=ENST00000423409.1;source_transcript_name=TMEM167AP1-201;source_gene=ENSG00000226504.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226504.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423409.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMEM167AP1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;transcript_id=CHM13_chrY_T0001680;gene_id=CHM13_chrY_G0000556;Parent=CHM13_chrY_T0001680;transcript_name=CHM13_chrY_T0001680;gene_name=TMEM167AP1;ID=exon:CHM13_chrY_T0001680:0;Name=TMEM167AP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	21906217	21912652	.	+	.	source_gene_common_name=ENSG00000254488;source_gene=ENSG00000254488.1;alternative_source_transcripts=ENST00000527562.1;gene_id=CHM13_chrY_G0000557;gene_biotype=lncRNA;gene_name=ENSG00000254488;gene_sources=liftoff;ID=CHM13_chrY_G0000557;Name=ENSG00000254488
CHM13_chrY	CAT	transcript	21906217	21912652	1000	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=CHM13_chrY_T0001681;gene_id=CHM13_chrY_G0000557;Parent=CHM13_chrY_G0000557;transcript_name=CHM13_chrY_T0001681;gene_name=ENSG00000254488;ID=CHM13_chrY_T0001681;Name=ENSG00000254488
CHM13_chrY	CAT	exon	21906217	21906342	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=CHM13_chrY_T0001681;gene_id=CHM13_chrY_G0000557;Parent=CHM13_chrY_T0001681;transcript_name=CHM13_chrY_T0001681;gene_name=ENSG00000254488;ID=exon:CHM13_chrY_T0001681:0;Name=ENSG00000254488;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21906343	21908571	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=CHM13_chrY_T0001681;gene_id=CHM13_chrY_G0000557;Parent=CHM13_chrY_T0001681;transcript_name=CHM13_chrY_T0001681;gene_name=ENSG00000254488;ID=intron:CHM13_chrY_T0001681:0;Name=ENSG00000254488;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21908572	21908672	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=CHM13_chrY_T0001681;gene_id=CHM13_chrY_G0000557;Parent=CHM13_chrY_T0001681;transcript_name=CHM13_chrY_T0001681;gene_name=ENSG00000254488;ID=exon:CHM13_chrY_T0001681:1;Name=ENSG00000254488;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	21908673	21911896	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=CHM13_chrY_T0001681;gene_id=CHM13_chrY_G0000557;Parent=CHM13_chrY_T0001681;transcript_name=CHM13_chrY_T0001681;gene_name=ENSG00000254488;ID=intron:CHM13_chrY_T0001681:1;Name=ENSG00000254488;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	21911897	21912652	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=CHM13_chrY_T0001681;gene_id=CHM13_chrY_G0000557;Parent=CHM13_chrY_T0001681;transcript_name=CHM13_chrY_T0001681;gene_name=ENSG00000254488;ID=exon:CHM13_chrY_T0001681:2;Name=ENSG00000254488;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22006128	22006439	.	+	.	source_gene_common_name=TOMM22P1;source_gene=ENSG00000237427.1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;gene_id=CHM13_chrY_G0000558;gene_biotype=processed_pseudogene;gene_name=TOMM22P1;gene_sources=liftoff;ID=CHM13_chrY_G0000558;Name=TOMM22P1
CHM13_chrY	CAT	transcript	22006128	22006439	1000	+	.	source_transcript=ENST00000418578.1;source_transcript_name=TOMM22P1-201;source_gene=ENSG00000237427.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237427.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418578.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418578.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;transcript_id=CHM13_chrY_T0001682;gene_id=CHM13_chrY_G0000558;Parent=CHM13_chrY_G0000558;transcript_name=CHM13_chrY_T0001682;gene_name=TOMM22P1;ID=CHM13_chrY_T0001682;Name=TOMM22P1
CHM13_chrY	CAT	exon	22006128	22006439	.	+	.	source_transcript=ENST00000418578.1;source_transcript_name=TOMM22P1-201;source_gene=ENSG00000237427.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237427.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418578.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418578.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;transcript_id=CHM13_chrY_T0001682;gene_id=CHM13_chrY_G0000558;Parent=CHM13_chrY_T0001682;transcript_name=CHM13_chrY_T0001682;gene_name=TOMM22P1;ID=exon:CHM13_chrY_T0001682:0;Name=TOMM22P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22010505	22013125	.	-	.	source_gene_common_name=ENSG00000297760;source_gene=ENSG00000297760.1;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;gene_id=CHM13_chrY_G0000559;gene_biotype=lncRNA;gene_name=ENSG00000297760;gene_sources=liftoff;ID=CHM13_chrY_G0000559;Name=ENSG00000297760
CHM13_chrY	CAT	transcript	22010505	22013125	1000	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=CHM13_chrY_T0001683;gene_id=CHM13_chrY_G0000559;Parent=CHM13_chrY_G0000559;transcript_name=CHM13_chrY_T0001683;gene_name=ENSG00000297760;ID=CHM13_chrY_T0001683;Name=ENSG00000297760
CHM13_chrY	CAT	exon	22010505	22011970	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=CHM13_chrY_T0001683;gene_id=CHM13_chrY_G0000559;Parent=CHM13_chrY_T0001683;transcript_name=CHM13_chrY_T0001683;gene_name=ENSG00000297760;ID=exon:CHM13_chrY_T0001683:0;Name=ENSG00000297760;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22011971	22013018	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=CHM13_chrY_T0001683;gene_id=CHM13_chrY_G0000559;Parent=CHM13_chrY_T0001683;transcript_name=CHM13_chrY_T0001683;gene_name=ENSG00000297760;ID=intron:CHM13_chrY_T0001683:0;Name=ENSG00000297760;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22013019	22013125	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=CHM13_chrY_T0001683;gene_id=CHM13_chrY_G0000559;Parent=CHM13_chrY_T0001683;transcript_name=CHM13_chrY_T0001683;gene_name=ENSG00000297760;ID=exon:CHM13_chrY_T0001683:1;Name=ENSG00000297760;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22013905	22133090	.	+	.	source_gene_common_name=ENSG00000289707;source_gene=ENSG00000289707.2;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;gene_id=CHM13_chrY_G0000560;gene_biotype=lncRNA;gene_name=ENSG00000289707;gene_sources=liftoff;ID=CHM13_chrY_G0000560;Name=ENSG00000289707
CHM13_chrY	CAT	transcript	22013905	22048857	1000	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=CHM13_chrY_T0001684;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_G0000560;transcript_name=CHM13_chrY_T0001684;gene_name=ENSG00000289707;ID=CHM13_chrY_T0001684;Name=ENSG00000289707
CHM13_chrY	CAT	exon	22013905	22014140	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=CHM13_chrY_T0001684;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001684;transcript_name=CHM13_chrY_T0001684;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001684:0;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22014141	22023693	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=CHM13_chrY_T0001684;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001684;transcript_name=CHM13_chrY_T0001684;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001684:0;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22023694	22023788	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=CHM13_chrY_T0001684;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001684;transcript_name=CHM13_chrY_T0001684;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001684:1;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22023789	22026855	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=CHM13_chrY_T0001684;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001684;transcript_name=CHM13_chrY_T0001684;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001684:1;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22026856	22026909	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=CHM13_chrY_T0001684;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001684;transcript_name=CHM13_chrY_T0001684;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001684:2;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22026910	22028105	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=CHM13_chrY_T0001684;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001684;transcript_name=CHM13_chrY_T0001684;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001684:2;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22028106	22028240	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=CHM13_chrY_T0001684;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001684;transcript_name=CHM13_chrY_T0001684;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001684:3;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22028241	22045219	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=CHM13_chrY_T0001684;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001684;transcript_name=CHM13_chrY_T0001684;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001684:3;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22045220	22048857	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=CHM13_chrY_T0001684;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001684;transcript_name=CHM13_chrY_T0001684;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001684:4;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22013905	22133090	1000	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_G0000560;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=CHM13_chrY_T0001685;Name=ENSG00000289707
CHM13_chrY	CAT	exon	22013905	22014140	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001685:0;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22014141	22023693	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001685:0;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22023694	22023788	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001685:1;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22023789	22026855	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001685:1;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22026856	22026909	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001685:2;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22026910	22028105	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001685:2;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22028106	22028240	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001685:3;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22028241	22072404	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001685:3;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22072405	22072468	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001685:4;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22072469	22103615	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001685:4;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22103616	22103723	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001685:5;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22103724	22125813	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001685:5;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22125814	22125972	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001685:6;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22125973	22128386	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001685:6;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22128387	22128457	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001685:7;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22128458	22130677	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001685:7;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22130678	22133090	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=CHM13_chrY_T0001685;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001685;transcript_name=CHM13_chrY_T0001685;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001685:8;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22103401	22128457	1000	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=CHM13_chrY_T0001687;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_G0000560;transcript_name=CHM13_chrY_T0001687;gene_name=ENSG00000289707;ID=CHM13_chrY_T0001687;Name=ENSG00000289707
CHM13_chrY	CAT	exon	22103401	22103438	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=CHM13_chrY_T0001687;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001687;transcript_name=CHM13_chrY_T0001687;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001687:0;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22103439	22103615	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=CHM13_chrY_T0001687;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001687;transcript_name=CHM13_chrY_T0001687;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001687:0;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22103616	22103723	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=CHM13_chrY_T0001687;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001687;transcript_name=CHM13_chrY_T0001687;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001687:1;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22103724	22125813	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=CHM13_chrY_T0001687;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001687;transcript_name=CHM13_chrY_T0001687;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001687:1;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22125814	22125972	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=CHM13_chrY_T0001687;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001687;transcript_name=CHM13_chrY_T0001687;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001687:2;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22125973	22128386	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=CHM13_chrY_T0001687;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001687;transcript_name=CHM13_chrY_T0001687;gene_name=ENSG00000289707;ID=intron:CHM13_chrY_T0001687:2;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22128387	22128457	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=CHM13_chrY_T0001687;gene_id=CHM13_chrY_G0000560;Parent=CHM13_chrY_T0001687;transcript_name=CHM13_chrY_T0001687;gene_name=ENSG00000289707;ID=exon:CHM13_chrY_T0001687:3;Name=ENSG00000289707;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22096370	22097353	.	-	.	source_gene_common_name=NEFLP1;source_gene=ENSG00000232634.1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;gene_id=CHM13_chrY_G0000561;gene_biotype=processed_pseudogene;gene_name=NEFLP1;gene_sources=liftoff;ID=CHM13_chrY_G0000561;Name=NEFLP1
CHM13_chrY	CAT	transcript	22096370	22097353	1000	-	.	source_transcript=ENST00000436364.1;source_transcript_name=NEFLP1-201;source_gene=ENSG00000232634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436364.1;transcript_score=199.898;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NEFLP1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;transcript_id=CHM13_chrY_T0001686;gene_id=CHM13_chrY_G0000561;Parent=CHM13_chrY_G0000561;transcript_name=CHM13_chrY_T0001686;gene_name=NEFLP1;ID=CHM13_chrY_T0001686;Name=NEFLP1
CHM13_chrY	CAT	exon	22096370	22097353	.	-	.	source_transcript=ENST00000436364.1;source_transcript_name=NEFLP1-201;source_gene=ENSG00000232634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436364.1;transcript_score=199.898;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NEFLP1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;transcript_id=CHM13_chrY_T0001686;gene_id=CHM13_chrY_G0000561;Parent=CHM13_chrY_T0001686;transcript_name=CHM13_chrY_T0001686;gene_name=NEFLP1;ID=exon:CHM13_chrY_T0001686:0;Name=NEFLP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22186527	22194154	.	+	.	source_gene_common_name=ENSG00000226918;source_gene=ENSG00000226918.1;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;gene_id=CHM13_chrY_G0000562;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000226918;gene_sources=liftoff;ID=CHM13_chrY_G0000562;Name=ENSG00000226918
CHM13_chrY	CAT	transcript	22186527	22194154	1000	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_G0000562;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=CHM13_chrY_T0001688;Name=ENSG00000226918
CHM13_chrY	CAT	exon	22186527	22186635	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=exon:CHM13_chrY_T0001688:0;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22186636	22187080	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=intron:CHM13_chrY_T0001688:0;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22187081	22187259	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=exon:CHM13_chrY_T0001688:1;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22187260	22189436	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=intron:CHM13_chrY_T0001688:1;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22189437	22189554	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=exon:CHM13_chrY_T0001688:2;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22189555	22189865	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=intron:CHM13_chrY_T0001688:2;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22189866	22189896	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=exon:CHM13_chrY_T0001688:3;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22189897	22191892	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=intron:CHM13_chrY_T0001688:3;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22191893	22192007	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=exon:CHM13_chrY_T0001688:4;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22192008	22192874	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=intron:CHM13_chrY_T0001688:4;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22192875	22192985	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=exon:CHM13_chrY_T0001688:5;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22192986	22193066	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=intron:CHM13_chrY_T0001688:5;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22193067	22193155	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=exon:CHM13_chrY_T0001688:6;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22193156	22193578	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=intron:CHM13_chrY_T0001688:6;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22193579	22193756	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=exon:CHM13_chrY_T0001688:7;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22193757	22194032	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=intron:CHM13_chrY_T0001688:7;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22194033	22194154	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=CHM13_chrY_T0001688;gene_id=CHM13_chrY_G0000562;Parent=CHM13_chrY_T0001688;transcript_name=CHM13_chrY_T0001688;gene_name=ENSG00000226918;ID=exon:CHM13_chrY_T0001688:8;Name=ENSG00000226918;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22258216	22261621	.	-	.	source_gene_common_name=PRORY;source_gene=ENSG00000183146.4;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;gene_id=CHM13_chrY_G0000563;gene_biotype=lncRNA;gene_name=PRORY;gene_sources=liftoff;ID=CHM13_chrY_G0000563;Name=PRORY
CHM13_chrY	CAT	transcript	22258216	22261621	1000	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=CHM13_chrY_T0001689;gene_id=CHM13_chrY_G0000563;Parent=CHM13_chrY_G0000563;transcript_name=CHM13_chrY_T0001689;gene_name=PRORY;ID=CHM13_chrY_T0001689;Name=PRORY
CHM13_chrY	CAT	exon	22258216	22258541	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=CHM13_chrY_T0001689;gene_id=CHM13_chrY_G0000563;Parent=CHM13_chrY_T0001689;transcript_name=CHM13_chrY_T0001689;gene_name=PRORY;ID=exon:CHM13_chrY_T0001689:0;Name=PRORY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22258542	22258692	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=CHM13_chrY_T0001689;gene_id=CHM13_chrY_G0000563;Parent=CHM13_chrY_T0001689;transcript_name=CHM13_chrY_T0001689;gene_name=PRORY;ID=intron:CHM13_chrY_T0001689:0;Name=PRORY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22258693	22259057	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=CHM13_chrY_T0001689;gene_id=CHM13_chrY_G0000563;Parent=CHM13_chrY_T0001689;transcript_name=CHM13_chrY_T0001689;gene_name=PRORY;ID=exon:CHM13_chrY_T0001689:1;Name=PRORY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22259058	22259173	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=CHM13_chrY_T0001689;gene_id=CHM13_chrY_G0000563;Parent=CHM13_chrY_T0001689;transcript_name=CHM13_chrY_T0001689;gene_name=PRORY;ID=intron:CHM13_chrY_T0001689:1;Name=PRORY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22259174	22259230	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=CHM13_chrY_T0001689;gene_id=CHM13_chrY_G0000563;Parent=CHM13_chrY_T0001689;transcript_name=CHM13_chrY_T0001689;gene_name=PRORY;ID=exon:CHM13_chrY_T0001689:2;Name=PRORY;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22259231	22261492	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=CHM13_chrY_T0001689;gene_id=CHM13_chrY_G0000563;Parent=CHM13_chrY_T0001689;transcript_name=CHM13_chrY_T0001689;gene_name=PRORY;ID=intron:CHM13_chrY_T0001689:2;Name=PRORY;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22261493	22261621	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=CHM13_chrY_T0001689;gene_id=CHM13_chrY_G0000563;Parent=CHM13_chrY_T0001689;transcript_name=CHM13_chrY_T0001689;gene_name=PRORY;ID=exon:CHM13_chrY_T0001689:3;Name=PRORY;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22269899	22327191	.	-	.	source_gene_common_name=ENSG00000293672;source_gene=ENSG00000293672.1;gene_id=CHM13_chrY_G0000564;gene_biotype=lncRNA;gene_name=ENSG00000293672;gene_sources=liftoff;ID=CHM13_chrY_G0000564;Name=ENSG00000293672
CHM13_chrY	CAT	transcript	22269899	22327191	1000	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=CHM13_chrY_T0001690;gene_id=CHM13_chrY_G0000564;Parent=CHM13_chrY_G0000564;transcript_name=CHM13_chrY_T0001690;gene_name=ENSG00000293672;ID=CHM13_chrY_T0001690;Name=ENSG00000293672
CHM13_chrY	CAT	exon	22269899	22270553	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=CHM13_chrY_T0001690;gene_id=CHM13_chrY_G0000564;Parent=CHM13_chrY_T0001690;transcript_name=CHM13_chrY_T0001690;gene_name=ENSG00000293672;ID=exon:CHM13_chrY_T0001690:0;Name=ENSG00000293672;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22270554	22270961	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=CHM13_chrY_T0001690;gene_id=CHM13_chrY_G0000564;Parent=CHM13_chrY_T0001690;transcript_name=CHM13_chrY_T0001690;gene_name=ENSG00000293672;ID=intron:CHM13_chrY_T0001690:0;Name=ENSG00000293672;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22270962	22271050	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=CHM13_chrY_T0001690;gene_id=CHM13_chrY_G0000564;Parent=CHM13_chrY_T0001690;transcript_name=CHM13_chrY_T0001690;gene_name=ENSG00000293672;ID=exon:CHM13_chrY_T0001690:1;Name=ENSG00000293672;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22271051	22326906	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=CHM13_chrY_T0001690;gene_id=CHM13_chrY_G0000564;Parent=CHM13_chrY_T0001690;transcript_name=CHM13_chrY_T0001690;gene_name=ENSG00000293672;ID=intron:CHM13_chrY_T0001690:1;Name=ENSG00000293672;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22326907	22327191	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=CHM13_chrY_T0001690;gene_id=CHM13_chrY_G0000564;Parent=CHM13_chrY_T0001690;transcript_name=CHM13_chrY_T0001690;gene_name=ENSG00000293672;ID=exon:CHM13_chrY_T0001690:2;Name=ENSG00000293672;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22269970	22280033	.	-	.	source_gene_common_name=ENSG00000290954;source_gene=ENSG00000290954.2;gene_id=CHM13_chrY_G0000565;gene_biotype=lncRNA;gene_name=ENSG00000290954;gene_sources=liftoff;ID=CHM13_chrY_G0000565;Name=ENSG00000290954
CHM13_chrY	CAT	transcript	22269970	22279999	1000	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001691;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_G0000565;transcript_name=CHM13_chrY_T0001691;gene_name=ENSG00000290954;ID=CHM13_chrY_T0001691;Name=ENSG00000290954
CHM13_chrY	CAT	exon	22269970	22270553	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001691;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001691;transcript_name=CHM13_chrY_T0001691;gene_name=ENSG00000290954;ID=exon:CHM13_chrY_T0001691:0;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22270554	22270961	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001691;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001691;transcript_name=CHM13_chrY_T0001691;gene_name=ENSG00000290954;ID=intron:CHM13_chrY_T0001691:0;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22270962	22271050	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001691;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001691;transcript_name=CHM13_chrY_T0001691;gene_name=ENSG00000290954;ID=exon:CHM13_chrY_T0001691:1;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22271051	22271132	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001691;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001691;transcript_name=CHM13_chrY_T0001691;gene_name=ENSG00000290954;ID=intron:CHM13_chrY_T0001691:1;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22271133	22271243	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001691;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001691;transcript_name=CHM13_chrY_T0001691;gene_name=ENSG00000290954;ID=exon:CHM13_chrY_T0001691:2;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22271244	22276738	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001691;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001691;transcript_name=CHM13_chrY_T0001691;gene_name=ENSG00000290954;ID=intron:CHM13_chrY_T0001691:2;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22276739	22276851	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001691;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001691;transcript_name=CHM13_chrY_T0001691;gene_name=ENSG00000290954;ID=exon:CHM13_chrY_T0001691:3;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22276852	22279179	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001691;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001691;transcript_name=CHM13_chrY_T0001691;gene_name=ENSG00000290954;ID=intron:CHM13_chrY_T0001691:3;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22279180	22279244	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001691;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001691;transcript_name=CHM13_chrY_T0001691;gene_name=ENSG00000290954;ID=exon:CHM13_chrY_T0001691:4;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22279245	22279890	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001691;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001691;transcript_name=CHM13_chrY_T0001691;gene_name=ENSG00000290954;ID=intron:CHM13_chrY_T0001691:4;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22279891	22279999	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001691;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001691;transcript_name=CHM13_chrY_T0001691;gene_name=ENSG00000290954;ID=exon:CHM13_chrY_T0001691:5;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22270410	22280033	1000	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001693;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_G0000565;transcript_name=CHM13_chrY_T0001693;gene_name=ENSG00000290954;ID=CHM13_chrY_T0001693;Name=ENSG00000290954
CHM13_chrY	CAT	exon	22270410	22270553	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001693;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001693;transcript_name=CHM13_chrY_T0001693;gene_name=ENSG00000290954;ID=exon:CHM13_chrY_T0001693:0;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22270554	22270961	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001693;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001693;transcript_name=CHM13_chrY_T0001693;gene_name=ENSG00000290954;ID=intron:CHM13_chrY_T0001693:0;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22270962	22271050	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001693;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001693;transcript_name=CHM13_chrY_T0001693;gene_name=ENSG00000290954;ID=exon:CHM13_chrY_T0001693:1;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22271051	22271132	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001693;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001693;transcript_name=CHM13_chrY_T0001693;gene_name=ENSG00000290954;ID=intron:CHM13_chrY_T0001693:1;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22271133	22271243	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001693;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001693;transcript_name=CHM13_chrY_T0001693;gene_name=ENSG00000290954;ID=exon:CHM13_chrY_T0001693:2;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22271244	22276184	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001693;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001693;transcript_name=CHM13_chrY_T0001693;gene_name=ENSG00000290954;ID=intron:CHM13_chrY_T0001693:2;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22276185	22276288	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001693;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001693;transcript_name=CHM13_chrY_T0001693;gene_name=ENSG00000290954;ID=exon:CHM13_chrY_T0001693:3;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22276289	22276738	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001693;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001693;transcript_name=CHM13_chrY_T0001693;gene_name=ENSG00000290954;ID=intron:CHM13_chrY_T0001693:3;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22276739	22276851	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001693;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001693;transcript_name=CHM13_chrY_T0001693;gene_name=ENSG00000290954;ID=exon:CHM13_chrY_T0001693:4;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22276852	22279890	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001693;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001693;transcript_name=CHM13_chrY_T0001693;gene_name=ENSG00000290954;ID=intron:CHM13_chrY_T0001693:4;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22279891	22280033	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=CHM13_chrY_T0001693;gene_id=CHM13_chrY_G0000565;Parent=CHM13_chrY_T0001693;transcript_name=CHM13_chrY_T0001693;gene_name=ENSG00000290954;ID=exon:CHM13_chrY_T0001693:5;Name=ENSG00000290954;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22270253	22276847	.	-	.	source_gene_common_name=RBMY2EP;source_gene=ENSG00000223637.9;gene_id=CHM13_chrY_G0000566;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2EP;gene_sources=liftoff;ID=CHM13_chrY_G0000566;Name=RBMY2EP
CHM13_chrY	CAT	transcript	22270253	22276847	1000	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_G0000566;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=CHM13_chrY_T0001692;Name=RBMY2EP
CHM13_chrY	CAT	exon	22270253	22270553	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_T0001692;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=exon:CHM13_chrY_T0001692:0;Name=RBMY2EP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22270554	22270961	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_T0001692;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=intron:CHM13_chrY_T0001692:0;Name=RBMY2EP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22270962	22271050	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_T0001692;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=exon:CHM13_chrY_T0001692:1;Name=RBMY2EP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22271051	22271132	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_T0001692;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=intron:CHM13_chrY_T0001692:1;Name=RBMY2EP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22271133	22271243	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_T0001692;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=exon:CHM13_chrY_T0001692:2;Name=RBMY2EP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22271244	22271607	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_T0001692;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=intron:CHM13_chrY_T0001692:2;Name=RBMY2EP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22271608	22271718	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_T0001692;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=exon:CHM13_chrY_T0001692:3;Name=RBMY2EP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22271719	22272599	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_T0001692;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=intron:CHM13_chrY_T0001692:3;Name=RBMY2EP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22272600	22272714	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_T0001692;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=exon:CHM13_chrY_T0001692:4;Name=RBMY2EP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22272715	22276184	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_T0001692;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=intron:CHM13_chrY_T0001692:4;Name=RBMY2EP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22276185	22276288	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_T0001692;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=exon:CHM13_chrY_T0001692:5;Name=RBMY2EP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22276289	22276738	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_T0001692;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=intron:CHM13_chrY_T0001692:5;Name=RBMY2EP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22276739	22276847	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=CHM13_chrY_T0001692;gene_id=CHM13_chrY_G0000566;Parent=CHM13_chrY_T0001692;transcript_name=CHM13_chrY_T0001692;gene_name=RBMY2EP;ID=exon:CHM13_chrY_T0001692:6;Name=RBMY2EP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22281032	22281257	.	+	.	source_gene_common_name=ENSG00000236615;source_gene=ENSG00000236615.1;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;gene_id=CHM13_chrY_G0000567;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236615;gene_sources=liftoff;ID=CHM13_chrY_G0000567;Name=ENSG00000236615
CHM13_chrY	CAT	transcript	22281032	22281257	1000	+	.	source_transcript=ENST00000428616.1;source_transcript_name=ENST00000428616;source_gene=ENSG00000236615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428616.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428616.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236615;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;transcript_id=CHM13_chrY_T0001694;gene_id=CHM13_chrY_G0000567;Parent=CHM13_chrY_G0000567;transcript_name=CHM13_chrY_T0001694;gene_name=ENSG00000236615;ID=CHM13_chrY_T0001694;Name=ENSG00000236615
CHM13_chrY	CAT	exon	22281032	22281257	.	+	.	source_transcript=ENST00000428616.1;source_transcript_name=ENST00000428616;source_gene=ENSG00000236615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428616.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428616.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236615;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;transcript_id=CHM13_chrY_T0001694;gene_id=CHM13_chrY_G0000567;Parent=CHM13_chrY_T0001694;transcript_name=CHM13_chrY_T0001694;gene_name=ENSG00000236615;ID=exon:CHM13_chrY_T0001694:0;Name=ENSG00000236615;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22299290	22331479	.	-	.	source_gene_common_name=ENSG00000288057;source_gene=ENSG00000288057.2;gene_id=CHM13_chrY_G0000568;gene_biotype=lncRNA;gene_name=ENSG00000288057;gene_sources=liftoff;ID=CHM13_chrY_G0000568;Name=ENSG00000288057
CHM13_chrY	CAT	transcript	22299290	22331479	1000	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001695;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_G0000568;transcript_name=CHM13_chrY_T0001695;gene_name=ENSG00000288057;ID=CHM13_chrY_T0001695;Name=ENSG00000288057
CHM13_chrY	CAT	exon	22299290	22301525	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001695;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_T0001695;transcript_name=CHM13_chrY_T0001695;gene_name=ENSG00000288057;ID=exon:CHM13_chrY_T0001695:0;Name=ENSG00000288057;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22301526	22326906	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001695;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_T0001695;transcript_name=CHM13_chrY_T0001695;gene_name=ENSG00000288057;ID=intron:CHM13_chrY_T0001695:0;Name=ENSG00000288057;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22326907	22327069	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001695;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_T0001695;transcript_name=CHM13_chrY_T0001695;gene_name=ENSG00000288057;ID=exon:CHM13_chrY_T0001695:1;Name=ENSG00000288057;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22327070	22329785	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001695;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_T0001695;transcript_name=CHM13_chrY_T0001695;gene_name=ENSG00000288057;ID=intron:CHM13_chrY_T0001695:1;Name=ENSG00000288057;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22329786	22329925	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001695;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_T0001695;transcript_name=CHM13_chrY_T0001695;gene_name=ENSG00000288057;ID=exon:CHM13_chrY_T0001695:2;Name=ENSG00000288057;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22329926	22331160	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001695;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_T0001695;transcript_name=CHM13_chrY_T0001695;gene_name=ENSG00000288057;ID=intron:CHM13_chrY_T0001695:2;Name=ENSG00000288057;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22331161	22331479	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001695;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_T0001695;transcript_name=CHM13_chrY_T0001695;gene_name=ENSG00000288057;ID=exon:CHM13_chrY_T0001695:3;Name=ENSG00000288057;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22301142	22327108	1000	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001696;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_G0000568;transcript_name=CHM13_chrY_T0001696;gene_name=ENSG00000288057;ID=CHM13_chrY_T0001696;Name=ENSG00000288057
CHM13_chrY	CAT	exon	22301142	22301525	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001696;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_T0001696;transcript_name=CHM13_chrY_T0001696;gene_name=ENSG00000288057;ID=exon:CHM13_chrY_T0001696:0;Name=ENSG00000288057;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22301526	22306667	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001696;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_T0001696;transcript_name=CHM13_chrY_T0001696;gene_name=ENSG00000288057;ID=intron:CHM13_chrY_T0001696:0;Name=ENSG00000288057;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22306668	22306756	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001696;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_T0001696;transcript_name=CHM13_chrY_T0001696;gene_name=ENSG00000288057;ID=exon:CHM13_chrY_T0001696:1;Name=ENSG00000288057;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22306757	22326906	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001696;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_T0001696;transcript_name=CHM13_chrY_T0001696;gene_name=ENSG00000288057;ID=intron:CHM13_chrY_T0001696:1;Name=ENSG00000288057;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22326907	22327108	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=CHM13_chrY_T0001696;gene_id=CHM13_chrY_G0000568;Parent=CHM13_chrY_T0001696;transcript_name=CHM13_chrY_T0001696;gene_name=ENSG00000288057;ID=exon:CHM13_chrY_T0001696:2;Name=ENSG00000288057;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22305959	22312508	.	-	.	source_gene_common_name=RBMY2TP;source_gene=ENSG00000237269.1;gene_id=CHM13_chrY_G0000569;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2TP;gene_sources=liftoff;ID=CHM13_chrY_G0000569;Name=RBMY2TP
CHM13_chrY	CAT	transcript	22305959	22312508	1000	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=CHM13_chrY_T0001697;gene_id=CHM13_chrY_G0000569;Parent=CHM13_chrY_G0000569;transcript_name=CHM13_chrY_T0001697;gene_name=RBMY2TP;ID=CHM13_chrY_T0001697;Name=RBMY2TP
CHM13_chrY	CAT	exon	22305959	22306259	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=CHM13_chrY_T0001697;gene_id=CHM13_chrY_G0000569;Parent=CHM13_chrY_T0001697;transcript_name=CHM13_chrY_T0001697;gene_name=RBMY2TP;ID=exon:CHM13_chrY_T0001697:0;Name=RBMY2TP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22306260	22306667	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=CHM13_chrY_T0001697;gene_id=CHM13_chrY_G0000569;Parent=CHM13_chrY_T0001697;transcript_name=CHM13_chrY_T0001697;gene_name=RBMY2TP;ID=intron:CHM13_chrY_T0001697:0;Name=RBMY2TP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22306668	22306756	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=CHM13_chrY_T0001697;gene_id=CHM13_chrY_G0000569;Parent=CHM13_chrY_T0001697;transcript_name=CHM13_chrY_T0001697;gene_name=RBMY2TP;ID=exon:CHM13_chrY_T0001697:1;Name=RBMY2TP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22306757	22306849	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=CHM13_chrY_T0001697;gene_id=CHM13_chrY_G0000569;Parent=CHM13_chrY_T0001697;transcript_name=CHM13_chrY_T0001697;gene_name=RBMY2TP;ID=intron:CHM13_chrY_T0001697:1;Name=RBMY2TP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22306850	22306960	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=CHM13_chrY_T0001697;gene_id=CHM13_chrY_G0000569;Parent=CHM13_chrY_T0001697;transcript_name=CHM13_chrY_T0001697;gene_name=RBMY2TP;ID=exon:CHM13_chrY_T0001697:2;Name=RBMY2TP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22306961	22307846	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=CHM13_chrY_T0001697;gene_id=CHM13_chrY_G0000569;Parent=CHM13_chrY_T0001697;transcript_name=CHM13_chrY_T0001697;gene_name=RBMY2TP;ID=intron:CHM13_chrY_T0001697:2;Name=RBMY2TP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22307847	22307961	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=CHM13_chrY_T0001697;gene_id=CHM13_chrY_G0000569;Parent=CHM13_chrY_T0001697;transcript_name=CHM13_chrY_T0001697;gene_name=RBMY2TP;ID=exon:CHM13_chrY_T0001697:3;Name=RBMY2TP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22307962	22309953	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=CHM13_chrY_T0001697;gene_id=CHM13_chrY_G0000569;Parent=CHM13_chrY_T0001697;transcript_name=CHM13_chrY_T0001697;gene_name=RBMY2TP;ID=intron:CHM13_chrY_T0001697:3;Name=RBMY2TP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22309954	22310106	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=CHM13_chrY_T0001697;gene_id=CHM13_chrY_G0000569;Parent=CHM13_chrY_T0001697;transcript_name=CHM13_chrY_T0001697;gene_name=RBMY2TP;ID=exon:CHM13_chrY_T0001697:4;Name=RBMY2TP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22310107	22312330	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=CHM13_chrY_T0001697;gene_id=CHM13_chrY_G0000569;Parent=CHM13_chrY_T0001697;transcript_name=CHM13_chrY_T0001697;gene_name=RBMY2TP;ID=intron:CHM13_chrY_T0001697:4;Name=RBMY2TP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22312331	22312508	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=CHM13_chrY_T0001697;gene_id=CHM13_chrY_G0000569;Parent=CHM13_chrY_T0001697;transcript_name=CHM13_chrY_T0001697;gene_name=RBMY2TP;ID=exon:CHM13_chrY_T0001697:5;Name=RBMY2TP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22343421	22345946	.	+	.	source_gene_common_name=TSPY14P;source_gene=ENSG00000169849.8;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;gene_id=CHM13_chrY_G0000570;gene_biotype=unprocessed_pseudogene;gene_name=TSPY14P;gene_sources=liftoff;ID=CHM13_chrY_G0000570;Name=TSPY14P
CHM13_chrY	CAT	transcript	22343421	22345946	1000	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=CHM13_chrY_T0001698;gene_id=CHM13_chrY_G0000570;Parent=CHM13_chrY_G0000570;transcript_name=CHM13_chrY_T0001698;gene_name=TSPY14P;ID=CHM13_chrY_T0001698;Name=TSPY14P
CHM13_chrY	CAT	exon	22343421	22343894	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=CHM13_chrY_T0001698;gene_id=CHM13_chrY_G0000570;Parent=CHM13_chrY_T0001698;transcript_name=CHM13_chrY_T0001698;gene_name=TSPY14P;ID=exon:CHM13_chrY_T0001698:0;Name=TSPY14P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22343895	22344503	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=CHM13_chrY_T0001698;gene_id=CHM13_chrY_G0000570;Parent=CHM13_chrY_T0001698;transcript_name=CHM13_chrY_T0001698;gene_name=TSPY14P;ID=intron:CHM13_chrY_T0001698:0;Name=TSPY14P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22344504	22344581	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=CHM13_chrY_T0001698;gene_id=CHM13_chrY_G0000570;Parent=CHM13_chrY_T0001698;transcript_name=CHM13_chrY_T0001698;gene_name=TSPY14P;ID=exon:CHM13_chrY_T0001698:1;Name=TSPY14P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22344582	22344709	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=CHM13_chrY_T0001698;gene_id=CHM13_chrY_G0000570;Parent=CHM13_chrY_T0001698;transcript_name=CHM13_chrY_T0001698;gene_name=TSPY14P;ID=intron:CHM13_chrY_T0001698:1;Name=TSPY14P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22344710	22344821	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=CHM13_chrY_T0001698;gene_id=CHM13_chrY_G0000570;Parent=CHM13_chrY_T0001698;transcript_name=CHM13_chrY_T0001698;gene_name=TSPY14P;ID=exon:CHM13_chrY_T0001698:2;Name=TSPY14P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22344822	22344920	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=CHM13_chrY_T0001698;gene_id=CHM13_chrY_G0000570;Parent=CHM13_chrY_T0001698;transcript_name=CHM13_chrY_T0001698;gene_name=TSPY14P;ID=intron:CHM13_chrY_T0001698:2;Name=TSPY14P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22344921	22345066	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=CHM13_chrY_T0001698;gene_id=CHM13_chrY_G0000570;Parent=CHM13_chrY_T0001698;transcript_name=CHM13_chrY_T0001698;gene_name=TSPY14P;ID=exon:CHM13_chrY_T0001698:3;Name=TSPY14P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22345067	22345174	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=CHM13_chrY_T0001698;gene_id=CHM13_chrY_G0000570;Parent=CHM13_chrY_T0001698;transcript_name=CHM13_chrY_T0001698;gene_name=TSPY14P;ID=intron:CHM13_chrY_T0001698:3;Name=TSPY14P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22345175	22345256	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=CHM13_chrY_T0001698;gene_id=CHM13_chrY_G0000570;Parent=CHM13_chrY_T0001698;transcript_name=CHM13_chrY_T0001698;gene_name=TSPY14P;ID=exon:CHM13_chrY_T0001698:4;Name=TSPY14P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22345257	22345923	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=CHM13_chrY_T0001698;gene_id=CHM13_chrY_G0000570;Parent=CHM13_chrY_T0001698;transcript_name=CHM13_chrY_T0001698;gene_name=TSPY14P;ID=intron:CHM13_chrY_T0001698:4;Name=TSPY14P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22345924	22345946	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=CHM13_chrY_T0001698;gene_id=CHM13_chrY_G0000570;Parent=CHM13_chrY_T0001698;transcript_name=CHM13_chrY_T0001698;gene_name=TSPY14P;ID=exon:CHM13_chrY_T0001698:5;Name=TSPY14P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22368782	22377230	.	+	.	source_gene_common_name=RBMY1HP;source_gene=ENSG00000169811.8;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;gene_id=CHM13_chrY_G0000571;gene_biotype=unprocessed_pseudogene;gene_name=RBMY1HP;gene_sources=liftoff;ID=CHM13_chrY_G0000571;Name=RBMY1HP
CHM13_chrY	CAT	transcript	22368782	22377230	1000	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_G0000571;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=CHM13_chrY_T0001699;Name=RBMY1HP
CHM13_chrY	CAT	exon	22368782	22368959	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=exon:CHM13_chrY_T0001699:0;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22368960	22370872	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=intron:CHM13_chrY_T0001699:0;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22370873	22371025	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=exon:CHM13_chrY_T0001699:1;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22371026	22373035	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=intron:CHM13_chrY_T0001699:1;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22373036	22373150	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=exon:CHM13_chrY_T0001699:2;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22373151	22374105	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=intron:CHM13_chrY_T0001699:2;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22374106	22374216	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=exon:CHM13_chrY_T0001699:3;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22374217	22374657	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=intron:CHM13_chrY_T0001699:3;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22374658	22374768	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=exon:CHM13_chrY_T0001699:4;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22374769	22375202	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=intron:CHM13_chrY_T0001699:4;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22375203	22375313	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=exon:CHM13_chrY_T0001699:5;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22375314	22375746	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=intron:CHM13_chrY_T0001699:5;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22375747	22375857	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=exon:CHM13_chrY_T0001699:6;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22375858	22376234	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=intron:CHM13_chrY_T0001699:6;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22376235	22376345	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=exon:CHM13_chrY_T0001699:7;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22376346	22376431	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=intron:CHM13_chrY_T0001699:7;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22376432	22376520	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=exon:CHM13_chrY_T0001699:8;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22376521	22376931	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=intron:CHM13_chrY_T0001699:8;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22376932	22377230	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=CHM13_chrY_T0001699;gene_id=CHM13_chrY_G0000571;Parent=CHM13_chrY_T0001699;transcript_name=CHM13_chrY_T0001699;gene_name=RBMY1HP;ID=exon:CHM13_chrY_T0001699:9;Name=RBMY1HP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22383561	22385732	.	-	.	source_gene_common_name=ENSG00000242393;source_gene=ENSG00000242393.1;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;gene_id=CHM13_chrY_G0000572;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000242393;gene_sources=liftoff;ID=CHM13_chrY_G0000572;Name=ENSG00000242393
CHM13_chrY	CAT	transcript	22383561	22385732	1000	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=CHM13_chrY_T0001700;gene_id=CHM13_chrY_G0000572;Parent=CHM13_chrY_G0000572;transcript_name=CHM13_chrY_T0001700;gene_name=ENSG00000242393;ID=CHM13_chrY_T0001700;Name=ENSG00000242393
CHM13_chrY	CAT	exon	22383561	22383608	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=CHM13_chrY_T0001700;gene_id=CHM13_chrY_G0000572;Parent=CHM13_chrY_T0001700;transcript_name=CHM13_chrY_T0001700;gene_name=ENSG00000242393;ID=exon:CHM13_chrY_T0001700:0;Name=ENSG00000242393;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22383609	22383725	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=CHM13_chrY_T0001700;gene_id=CHM13_chrY_G0000572;Parent=CHM13_chrY_T0001700;transcript_name=CHM13_chrY_T0001700;gene_name=ENSG00000242393;ID=intron:CHM13_chrY_T0001700:0;Name=ENSG00000242393;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22383726	22383871	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=CHM13_chrY_T0001700;gene_id=CHM13_chrY_G0000572;Parent=CHM13_chrY_T0001700;transcript_name=CHM13_chrY_T0001700;gene_name=ENSG00000242393;ID=exon:CHM13_chrY_T0001700:1;Name=ENSG00000242393;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22383872	22383957	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=CHM13_chrY_T0001700;gene_id=CHM13_chrY_G0000572;Parent=CHM13_chrY_T0001700;transcript_name=CHM13_chrY_T0001700;gene_name=ENSG00000242393;ID=intron:CHM13_chrY_T0001700:1;Name=ENSG00000242393;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22383958	22384021	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=CHM13_chrY_T0001700;gene_id=CHM13_chrY_G0000572;Parent=CHM13_chrY_T0001700;transcript_name=CHM13_chrY_T0001700;gene_name=ENSG00000242393;ID=exon:CHM13_chrY_T0001700:2;Name=ENSG00000242393;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22384022	22384284	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=CHM13_chrY_T0001700;gene_id=CHM13_chrY_G0000572;Parent=CHM13_chrY_T0001700;transcript_name=CHM13_chrY_T0001700;gene_name=ENSG00000242393;ID=intron:CHM13_chrY_T0001700:2;Name=ENSG00000242393;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22384285	22384350	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=CHM13_chrY_T0001700;gene_id=CHM13_chrY_G0000572;Parent=CHM13_chrY_T0001700;transcript_name=CHM13_chrY_T0001700;gene_name=ENSG00000242393;ID=exon:CHM13_chrY_T0001700:3;Name=ENSG00000242393;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22384351	22385339	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=CHM13_chrY_T0001700;gene_id=CHM13_chrY_G0000572;Parent=CHM13_chrY_T0001700;transcript_name=CHM13_chrY_T0001700;gene_name=ENSG00000242393;ID=intron:CHM13_chrY_T0001700:3;Name=ENSG00000242393;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22385340	22385732	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=299.861;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1,ENST00000456659.1;transcript_id=CHM13_chrY_T0001700;gene_id=CHM13_chrY_G0000572;Parent=CHM13_chrY_T0001700;transcript_name=CHM13_chrY_T0001700;gene_name=ENSG00000242393;ID=exon:CHM13_chrY_T0001700:4;Name=ENSG00000242393;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22386600	22401038	.	+	.	source_gene_common_name=RBMY1B;source_gene=ENSG00000242875.7;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;gene_id=CHM13_chrY_G0000573;gene_biotype=protein_coding;gene_name=RBMY1B;gene_sources=liftoff;ID=CHM13_chrY_G0000573;Name=RBMY1B
CHM13_chrY	CAT	transcript	22386600	22401038	100	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_G0000573;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=CHM13_chrY_T0001701;Name=RBMY1B
CHM13_chrY	CAT	exon	22386600	22386747	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001701:0;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22386748	22388608	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001701:0;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22388609	22388721	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001701:1;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22388613	22388721	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001701:0;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	22388613	22388615	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=start_codon:CHM13_chrY_T0001701;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22388722	22389185	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001701:1;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22389186	22389289	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001701:2;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22389186	22389289	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001701:1;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22389290	22392308	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001701:2;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22392309	22392486	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001701:3;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22392309	22392486	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001701:2;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22392487	22394401	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001701:3;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22394402	22394554	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001701:4;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22394402	22394554	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001701:3;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22394555	22396564	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001701:4;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22396565	22396679	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001701:5;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22396565	22396679	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001701:4;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22396680	22397634	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001701:5;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22397635	22397745	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001701:6;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22397635	22397745	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001701:5;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22397746	22398186	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001701:6;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22398187	22398297	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001701:7;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22398187	22398297	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001701:6;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22398298	22398731	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001701:7;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22398732	22398842	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001701:8;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22398732	22398842	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001701:7;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22398843	22399763	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001701:8;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22399764	22399874	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001701:9;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22399764	22399874	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001701:8;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22399875	22399961	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001701:9;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22399962	22400050	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001701:10;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22399962	22400050	.	+	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001701:9;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22400051	22400461	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001701:10;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22400462	22401038	.	+	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001701:11;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22400462	22400760	.	+	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001701:10;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	22400758	22400760	.	+	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000383020.7,ENST00000383020.7;transcript_id=CHM13_chrY_T0001701;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001701;transcript_name=CHM13_chrY_T0001701;gene_name=RBMY1B;ID=stop_codon:CHM13_chrY_T0001701;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22386625	22401038	1000	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_G0000573;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=CHM13_chrY_T0001702;Name=RBMY1B
CHM13_chrY	CAT	exon	22386625	22386747	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001702:0;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22386748	22388608	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001702:0;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22388609	22388721	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001702:1;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22388613	22388721	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001702:0;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	22388613	22388615	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=start_codon:CHM13_chrY_T0001702;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22388722	22389185	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001702:1;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22389186	22389289	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001702:2;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22389186	22389289	.	+	2	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001702:1;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22389290	22394401	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001702:2;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22394402	22394554	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001702:3;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22394402	22394434	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=CDS:CHM13_chrY_T0001702:2;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	22394432	22394434	.	+	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=stop_codon:CHM13_chrY_T0001702;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22394555	22396564	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001702:3;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22396565	22396679	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001702:4;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22396680	22397634	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001702:4;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22397635	22397745	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001702:5;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22397746	22398186	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001702:5;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22398187	22398297	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001702:6;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22398298	22398731	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001702:6;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22398732	22398842	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001702:7;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22398843	22399763	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001702:7;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22399764	22399874	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001702:8;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22399875	22399961	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001702:8;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22399962	22400050	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001702:9;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22400051	22400461	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=intron:CHM13_chrY_T0001702:9;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22400462	22401038	.	+	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;alternative_source_transcripts=ENST00000382639.7,ENST00000382639.7;transcript_id=CHM13_chrY_T0001702;gene_id=CHM13_chrY_G0000573;Parent=CHM13_chrY_T0001702;transcript_name=CHM13_chrY_T0001702;gene_name=RBMY1B;ID=exon:CHM13_chrY_T0001702:10;Name=RBMY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22407091	22409262	.	-	.	source_gene_common_name=ENSG00000228257;source_gene=ENSG00000228257.1;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;gene_id=CHM13_chrY_G0000574;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000228257;gene_sources=liftoff;ID=CHM13_chrY_G0000574;Name=ENSG00000228257
CHM13_chrY	CAT	transcript	22407091	22409262	1000	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=CHM13_chrY_T0001703;gene_id=CHM13_chrY_G0000574;Parent=CHM13_chrY_G0000574;transcript_name=CHM13_chrY_T0001703;gene_name=ENSG00000228257;ID=CHM13_chrY_T0001703;Name=ENSG00000228257
CHM13_chrY	CAT	exon	22407091	22407138	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=CHM13_chrY_T0001703;gene_id=CHM13_chrY_G0000574;Parent=CHM13_chrY_T0001703;transcript_name=CHM13_chrY_T0001703;gene_name=ENSG00000228257;ID=exon:CHM13_chrY_T0001703:0;Name=ENSG00000228257;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22407139	22407255	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=CHM13_chrY_T0001703;gene_id=CHM13_chrY_G0000574;Parent=CHM13_chrY_T0001703;transcript_name=CHM13_chrY_T0001703;gene_name=ENSG00000228257;ID=intron:CHM13_chrY_T0001703:0;Name=ENSG00000228257;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22407256	22407401	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=CHM13_chrY_T0001703;gene_id=CHM13_chrY_G0000574;Parent=CHM13_chrY_T0001703;transcript_name=CHM13_chrY_T0001703;gene_name=ENSG00000228257;ID=exon:CHM13_chrY_T0001703:1;Name=ENSG00000228257;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22407402	22407487	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=CHM13_chrY_T0001703;gene_id=CHM13_chrY_G0000574;Parent=CHM13_chrY_T0001703;transcript_name=CHM13_chrY_T0001703;gene_name=ENSG00000228257;ID=intron:CHM13_chrY_T0001703:1;Name=ENSG00000228257;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22407488	22407551	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=CHM13_chrY_T0001703;gene_id=CHM13_chrY_G0000574;Parent=CHM13_chrY_T0001703;transcript_name=CHM13_chrY_T0001703;gene_name=ENSG00000228257;ID=exon:CHM13_chrY_T0001703:2;Name=ENSG00000228257;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22407552	22407814	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=CHM13_chrY_T0001703;gene_id=CHM13_chrY_G0000574;Parent=CHM13_chrY_T0001703;transcript_name=CHM13_chrY_T0001703;gene_name=ENSG00000228257;ID=intron:CHM13_chrY_T0001703:2;Name=ENSG00000228257;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22407815	22407880	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=CHM13_chrY_T0001703;gene_id=CHM13_chrY_G0000574;Parent=CHM13_chrY_T0001703;transcript_name=CHM13_chrY_T0001703;gene_name=ENSG00000228257;ID=exon:CHM13_chrY_T0001703:3;Name=ENSG00000228257;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22407881	22408865	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=CHM13_chrY_T0001703;gene_id=CHM13_chrY_G0000574;Parent=CHM13_chrY_T0001703;transcript_name=CHM13_chrY_T0001703;gene_name=ENSG00000228257;ID=intron:CHM13_chrY_T0001703:3;Name=ENSG00000228257;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22408866	22409262	.	-	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1,ENST00000452426.1;transcript_id=CHM13_chrY_T0001703;gene_id=CHM13_chrY_G0000574;Parent=CHM13_chrY_T0001703;transcript_name=CHM13_chrY_T0001703;gene_name=ENSG00000228257;ID=exon:CHM13_chrY_T0001703:4;Name=ENSG00000228257;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22410130	22424578	.	+	.	source_gene_common_name=RBMY1D;source_gene=ENSG00000244395.6;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;gene_id=CHM13_chrY_G0000575;gene_biotype=protein_coding;gene_name=RBMY1D;gene_sources=liftoff;ID=CHM13_chrY_G0000575;Name=RBMY1D
CHM13_chrY	CAT	transcript	22410130	22424578	100	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_G0000575;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=CHM13_chrY_T0001704;Name=RBMY1D
CHM13_chrY	CAT	exon	22410130	22410277	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001704:0;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22410278	22412138	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001704:0;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22412139	22412251	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001704:1;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22412143	22412251	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001704:0;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	22412143	22412145	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=start_codon:CHM13_chrY_T0001704;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22412252	22412725	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001704:1;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22412726	22412829	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001704:2;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22412726	22412829	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001704:1;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22412830	22415848	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001704:2;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22415849	22416026	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001704:3;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22415849	22416026	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001704:2;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22416027	22417941	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001704:3;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22417942	22418094	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001704:4;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22417942	22418094	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001704:3;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22418095	22420104	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001704:4;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22420105	22420219	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001704:5;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22420105	22420219	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001704:4;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22420220	22421174	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001704:5;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22421175	22421285	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001704:6;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22421175	22421285	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001704:5;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22421286	22421726	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001704:6;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22421727	22421837	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001704:7;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22421727	22421837	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001704:6;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22421838	22422271	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001704:7;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22422272	22422382	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001704:8;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22422272	22422382	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001704:7;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22422383	22423303	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001704:8;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22423304	22423414	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001704:9;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22423304	22423414	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001704:8;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22423415	22423501	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001704:9;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22423502	22423590	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001704:10;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22423502	22423590	.	+	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001704:9;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22423591	22424001	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001704:10;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22424002	22424578	.	+	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001704:11;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22424002	22424300	.	+	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001704:10;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	22424298	22424300	.	+	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382707.6,ENST00000382707.6;transcript_id=CHM13_chrY_T0001704;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001704;transcript_name=CHM13_chrY_T0001704;gene_name=RBMY1D;ID=stop_codon:CHM13_chrY_T0001704;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22410155	22424578	1000	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_G0000575;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=CHM13_chrY_T0001705;Name=RBMY1D
CHM13_chrY	CAT	exon	22410155	22410277	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001705:0;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22410278	22412138	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001705:0;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22412139	22412251	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001705:1;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22412143	22412251	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001705:0;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	22412143	22412145	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=start_codon:CHM13_chrY_T0001705;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22412252	22412725	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001705:1;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22412726	22412829	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001705:2;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22412726	22412829	.	+	2	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001705:1;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22412830	22417941	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001705:2;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22417942	22418094	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001705:3;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22417942	22417974	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001705:2;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	22417972	22417974	.	+	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=stop_codon:CHM13_chrY_T0001705;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22418095	22420104	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001705:3;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22420105	22420219	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001705:4;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22420220	22421174	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001705:4;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22421175	22421285	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001705:5;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22421286	22421726	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001705:5;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22421727	22421837	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001705:6;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22421838	22422271	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001705:6;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22422272	22422382	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001705:7;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22422383	22423303	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001705:7;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22423304	22423414	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001705:8;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22423415	22423501	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001705:8;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22423502	22423590	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001705:9;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22423591	22424001	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001705:9;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22424002	22424578	.	+	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000361046.4,ENST00000361046.4;transcript_id=CHM13_chrY_T0001705;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001705;transcript_name=CHM13_chrY_T0001705;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001705:10;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22410217	22424346	100	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_G0000575;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=CHM13_chrY_T0001706;Name=RBMY1D
CHM13_chrY	CAT	exon	22410217	22410277	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001706:0;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22410278	22412138	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001706:0;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22412139	22412251	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001706:1;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22412143	22412251	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001706:0;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	22412143	22412145	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=start_codon:CHM13_chrY_T0001706;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22412252	22412725	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001706:1;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22412726	22412829	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001706:2;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22412726	22412829	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001706:1;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22412830	22415848	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001706:2;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22415849	22416026	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001706:3;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22415849	22416026	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001706:2;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22416027	22417941	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001706:3;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22417942	22418094	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001706:4;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22417942	22418094	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001706:3;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22418095	22420104	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001706:4;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22420105	22420219	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001706:5;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22420105	22420219	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001706:4;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22420220	22421174	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001706:5;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22421175	22421285	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001706:6;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22421175	22421285	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001706:5;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22421286	22421726	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001706:6;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22421727	22421837	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001706:7;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22421727	22421837	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001706:6;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22421838	22422271	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001706:7;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22422272	22422382	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001706:8;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22422272	22422382	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001706:7;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22422383	22423501	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001706:8;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22423502	22423590	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001706:9;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22423502	22423590	.	+	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001706:8;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22423591	22424001	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=intron:CHM13_chrY_T0001706:9;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22424002	22424346	.	+	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=exon:CHM13_chrY_T0001706:10;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22424002	22424300	.	+	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=CDS:CHM13_chrY_T0001706:9;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	22424298	22424300	.	+	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;transcript_id=CHM13_chrY_T0001706;gene_id=CHM13_chrY_G0000575;Parent=CHM13_chrY_T0001706;transcript_name=CHM13_chrY_T0001706;gene_name=RBMY1D;ID=stop_codon:CHM13_chrY_T0001706;Name=RBMY1D;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22431102	22433321	.	-	.	source_gene_common_name=ENSG00000229725;source_gene=ENSG00000229725.1;gene_id=CHM13_chrY_G0000576;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000229725;gene_sources=liftoff;ID=CHM13_chrY_G0000576;Name=ENSG00000229725
CHM13_chrY	CAT	transcript	22431102	22433321	1000	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=CHM13_chrY_T0001707;gene_id=CHM13_chrY_G0000576;Parent=CHM13_chrY_G0000576;transcript_name=CHM13_chrY_T0001707;gene_name=ENSG00000229725;ID=CHM13_chrY_T0001707;Name=ENSG00000229725
CHM13_chrY	CAT	exon	22431102	22431151	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=CHM13_chrY_T0001707;gene_id=CHM13_chrY_G0000576;Parent=CHM13_chrY_T0001707;transcript_name=CHM13_chrY_T0001707;gene_name=ENSG00000229725;ID=exon:CHM13_chrY_T0001707:0;Name=ENSG00000229725;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22431152	22431522	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=CHM13_chrY_T0001707;gene_id=CHM13_chrY_G0000576;Parent=CHM13_chrY_T0001707;transcript_name=CHM13_chrY_T0001707;gene_name=ENSG00000229725;ID=intron:CHM13_chrY_T0001707:0;Name=ENSG00000229725;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22431523	22431690	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=CHM13_chrY_T0001707;gene_id=CHM13_chrY_G0000576;Parent=CHM13_chrY_T0001707;transcript_name=CHM13_chrY_T0001707;gene_name=ENSG00000229725;ID=exon:CHM13_chrY_T0001707:1;Name=ENSG00000229725;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22431691	22432934	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=CHM13_chrY_T0001707;gene_id=CHM13_chrY_G0000576;Parent=CHM13_chrY_T0001707;transcript_name=CHM13_chrY_T0001707;gene_name=ENSG00000229725;ID=intron:CHM13_chrY_T0001707:1;Name=ENSG00000229725;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22432935	22433321	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;transcript_id=CHM13_chrY_T0001707;gene_id=CHM13_chrY_G0000576;Parent=CHM13_chrY_T0001707;transcript_name=CHM13_chrY_T0001707;gene_name=ENSG00000229725;ID=exon:CHM13_chrY_T0001707:2;Name=ENSG00000229725;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22440334	22480317	.	-	.	source_gene_common_name=TTTY13;source_gene=ENSG00000184991.3;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;gene_id=CHM13_chrY_G0000577;gene_biotype=lncRNA;gene_name=TTTY13;gene_sources=liftoff;ID=CHM13_chrY_G0000577;Name=TTTY13
CHM13_chrY	CAT	transcript	22440334	22480317	1000	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_G0000577;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=CHM13_chrY_T0001708;Name=TTTY13
CHM13_chrY	CAT	exon	22440334	22441431	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001708;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=exon:CHM13_chrY_T0001708:0;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22441432	22441575	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001708;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=intron:CHM13_chrY_T0001708:0;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22441576	22441650	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001708;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=exon:CHM13_chrY_T0001708:1;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22441651	22446237	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001708;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=intron:CHM13_chrY_T0001708:1;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22446238	22446396	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001708;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=exon:CHM13_chrY_T0001708:2;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22446397	22458758	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001708;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=intron:CHM13_chrY_T0001708:2;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22458759	22458900	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001708;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=exon:CHM13_chrY_T0001708:3;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22458901	22460020	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001708;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=intron:CHM13_chrY_T0001708:3;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22460021	22460112	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001708;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=exon:CHM13_chrY_T0001708:4;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22460113	22462739	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001708;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=intron:CHM13_chrY_T0001708:4;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22462740	22462901	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001708;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=exon:CHM13_chrY_T0001708:5;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22462902	22480103	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001708;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=intron:CHM13_chrY_T0001708:5;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22480104	22480317	.	-	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1,ENST00000652128.1;transcript_id=CHM13_chrY_T0001708;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001708;transcript_name=CHM13_chrY_T0001708;gene_name=TTTY13;ID=exon:CHM13_chrY_T0001708:6;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22458838	22469905	1000	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=CHM13_chrY_T0001709;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_G0000577;transcript_name=CHM13_chrY_T0001709;gene_name=TTTY13;ID=CHM13_chrY_T0001709;Name=TTTY13
CHM13_chrY	CAT	exon	22458838	22458900	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=CHM13_chrY_T0001709;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001709;transcript_name=CHM13_chrY_T0001709;gene_name=TTTY13;ID=exon:CHM13_chrY_T0001709:0;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22458901	22460020	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=CHM13_chrY_T0001709;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001709;transcript_name=CHM13_chrY_T0001709;gene_name=TTTY13;ID=intron:CHM13_chrY_T0001709:0;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22460021	22460112	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=CHM13_chrY_T0001709;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001709;transcript_name=CHM13_chrY_T0001709;gene_name=TTTY13;ID=exon:CHM13_chrY_T0001709:1;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22460113	22462739	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=CHM13_chrY_T0001709;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001709;transcript_name=CHM13_chrY_T0001709;gene_name=TTTY13;ID=intron:CHM13_chrY_T0001709:1;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22462740	22462901	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=CHM13_chrY_T0001709;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001709;transcript_name=CHM13_chrY_T0001709;gene_name=TTTY13;ID=exon:CHM13_chrY_T0001709:2;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22462902	22464510	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=CHM13_chrY_T0001709;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001709;transcript_name=CHM13_chrY_T0001709;gene_name=TTTY13;ID=intron:CHM13_chrY_T0001709:2;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22464511	22464609	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=CHM13_chrY_T0001709;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001709;transcript_name=CHM13_chrY_T0001709;gene_name=TTTY13;ID=exon:CHM13_chrY_T0001709:3;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22464610	22465204	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=CHM13_chrY_T0001709;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001709;transcript_name=CHM13_chrY_T0001709;gene_name=TTTY13;ID=intron:CHM13_chrY_T0001709:3;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22465205	22465366	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=CHM13_chrY_T0001709;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001709;transcript_name=CHM13_chrY_T0001709;gene_name=TTTY13;ID=exon:CHM13_chrY_T0001709:4;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22465367	22469824	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=CHM13_chrY_T0001709;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001709;transcript_name=CHM13_chrY_T0001709;gene_name=TTTY13;ID=intron:CHM13_chrY_T0001709:4;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22469825	22469905	.	-	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2,ENST00000330337.2;transcript_id=CHM13_chrY_T0001709;gene_id=CHM13_chrY_G0000577;Parent=CHM13_chrY_T0001709;transcript_name=CHM13_chrY_T0001709;gene_name=TTTY13;ID=exon:CHM13_chrY_T0001709:5;Name=TTTY13;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22506919	22507251	.	-	.	source_gene_common_name=ELOCP5;source_gene=ENSG00000271123.1;alternative_source_transcripts=ENST00000604924.1,ENST00000604924.1;gene_id=CHM13_chrY_G0000578;gene_biotype=processed_pseudogene;gene_name=ELOCP5;gene_sources=liftoff;ID=CHM13_chrY_G0000578;Name=ELOCP5
CHM13_chrY	CAT	transcript	22506919	22507251	1000	-	.	source_transcript=ENST00000604924.1;source_transcript_name=ELOCP5-201;source_gene=ENSG00000271123.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271123.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604924.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604924.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP5;alternative_source_transcripts=ENST00000604924.1,ENST00000604924.1;transcript_id=CHM13_chrY_T0001710;gene_id=CHM13_chrY_G0000578;Parent=CHM13_chrY_G0000578;transcript_name=CHM13_chrY_T0001710;gene_name=ELOCP5;ID=CHM13_chrY_T0001710;Name=ELOCP5
CHM13_chrY	CAT	exon	22506919	22507251	.	-	.	source_transcript=ENST00000604924.1;source_transcript_name=ELOCP5-201;source_gene=ENSG00000271123.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271123.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604924.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604924.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP5;alternative_source_transcripts=ENST00000604924.1,ENST00000604924.1;transcript_id=CHM13_chrY_T0001710;gene_id=CHM13_chrY_G0000578;Parent=CHM13_chrY_T0001710;transcript_name=CHM13_chrY_T0001710;gene_name=ELOCP5;ID=exon:CHM13_chrY_T0001710:0;Name=ELOCP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22512711	22514277	.	-	.	source_gene_common_name=CDY10P;source_gene=ENSG00000226042.1;alternative_source_transcripts=ENST00000452415.1,ENST00000452415.1;gene_id=CHM13_chrY_G0000579;gene_biotype=unprocessed_pseudogene;gene_name=CDY10P;gene_sources=liftoff;ID=CHM13_chrY_G0000579;Name=CDY10P
CHM13_chrY	CAT	transcript	22512711	22514277	1000	-	.	source_transcript=ENST00000452415.1;source_transcript_name=CDY10P-201;source_gene=ENSG00000226042.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226042.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452415.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452415.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY10P;alternative_source_transcripts=ENST00000452415.1,ENST00000452415.1;transcript_id=CHM13_chrY_T0001711;gene_id=CHM13_chrY_G0000579;Parent=CHM13_chrY_G0000579;transcript_name=CHM13_chrY_T0001711;gene_name=CDY10P;ID=CHM13_chrY_T0001711;Name=CDY10P
CHM13_chrY	CAT	exon	22512711	22514277	.	-	.	source_transcript=ENST00000452415.1;source_transcript_name=CDY10P-201;source_gene=ENSG00000226042.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226042.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452415.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452415.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY10P;alternative_source_transcripts=ENST00000452415.1,ENST00000452415.1;transcript_id=CHM13_chrY_T0001711;gene_id=CHM13_chrY_G0000579;Parent=CHM13_chrY_T0001711;transcript_name=CHM13_chrY_T0001711;gene_name=CDY10P;ID=exon:CHM13_chrY_T0001711:0;Name=CDY10P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22537162	22549494	.	+	.	source_gene_common_name=USP9YP3;source_gene=ENSG00000237023.1;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;gene_id=CHM13_chrY_G0000580;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP3;gene_sources=liftoff;ID=CHM13_chrY_G0000580;Name=USP9YP3
CHM13_chrY	CAT	transcript	22537162	22549494	1000	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=CHM13_chrY_T0001712;gene_id=CHM13_chrY_G0000580;Parent=CHM13_chrY_G0000580;transcript_name=CHM13_chrY_T0001712;gene_name=USP9YP3;ID=CHM13_chrY_T0001712;Name=USP9YP3
CHM13_chrY	CAT	exon	22537162	22537378	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=CHM13_chrY_T0001712;gene_id=CHM13_chrY_G0000580;Parent=CHM13_chrY_T0001712;transcript_name=CHM13_chrY_T0001712;gene_name=USP9YP3;ID=exon:CHM13_chrY_T0001712:0;Name=USP9YP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22537379	22539997	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=CHM13_chrY_T0001712;gene_id=CHM13_chrY_G0000580;Parent=CHM13_chrY_T0001712;transcript_name=CHM13_chrY_T0001712;gene_name=USP9YP3;ID=intron:CHM13_chrY_T0001712:0;Name=USP9YP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22539998	22540212	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=CHM13_chrY_T0001712;gene_id=CHM13_chrY_G0000580;Parent=CHM13_chrY_T0001712;transcript_name=CHM13_chrY_T0001712;gene_name=USP9YP3;ID=exon:CHM13_chrY_T0001712:1;Name=USP9YP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22540213	22542333	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=CHM13_chrY_T0001712;gene_id=CHM13_chrY_G0000580;Parent=CHM13_chrY_T0001712;transcript_name=CHM13_chrY_T0001712;gene_name=USP9YP3;ID=intron:CHM13_chrY_T0001712:1;Name=USP9YP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22542334	22542511	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=CHM13_chrY_T0001712;gene_id=CHM13_chrY_G0000580;Parent=CHM13_chrY_T0001712;transcript_name=CHM13_chrY_T0001712;gene_name=USP9YP3;ID=exon:CHM13_chrY_T0001712:2;Name=USP9YP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22542512	22545318	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=CHM13_chrY_T0001712;gene_id=CHM13_chrY_G0000580;Parent=CHM13_chrY_T0001712;transcript_name=CHM13_chrY_T0001712;gene_name=USP9YP3;ID=intron:CHM13_chrY_T0001712:2;Name=USP9YP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22545319	22545445	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=CHM13_chrY_T0001712;gene_id=CHM13_chrY_G0000580;Parent=CHM13_chrY_T0001712;transcript_name=CHM13_chrY_T0001712;gene_name=USP9YP3;ID=exon:CHM13_chrY_T0001712:3;Name=USP9YP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22545446	22548055	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=CHM13_chrY_T0001712;gene_id=CHM13_chrY_G0000580;Parent=CHM13_chrY_T0001712;transcript_name=CHM13_chrY_T0001712;gene_name=USP9YP3;ID=intron:CHM13_chrY_T0001712:3;Name=USP9YP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22548056	22548959	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=CHM13_chrY_T0001712;gene_id=CHM13_chrY_G0000580;Parent=CHM13_chrY_T0001712;transcript_name=CHM13_chrY_T0001712;gene_name=USP9YP3;ID=exon:CHM13_chrY_T0001712:4;Name=USP9YP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22548960	22549369	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=CHM13_chrY_T0001712;gene_id=CHM13_chrY_G0000580;Parent=CHM13_chrY_T0001712;transcript_name=CHM13_chrY_T0001712;gene_name=USP9YP3;ID=intron:CHM13_chrY_T0001712:4;Name=USP9YP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22549370	22549494	.	+	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1,ENST00000434481.1;transcript_id=CHM13_chrY_T0001712;gene_id=CHM13_chrY_G0000580;Parent=CHM13_chrY_T0001712;transcript_name=CHM13_chrY_T0001712;gene_name=USP9YP3;ID=exon:CHM13_chrY_T0001712:5;Name=USP9YP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22552732	22556604	.	-	.	source_gene_common_name=USP9YP8;source_gene=ENSG00000229416.1;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;gene_id=CHM13_chrY_G0000581;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP8;gene_sources=liftoff;ID=CHM13_chrY_G0000581;Name=USP9YP8
CHM13_chrY	CAT	transcript	22552732	22556604	1000	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=CHM13_chrY_T0001713;gene_id=CHM13_chrY_G0000581;Parent=CHM13_chrY_G0000581;transcript_name=CHM13_chrY_T0001713;gene_name=USP9YP8;ID=CHM13_chrY_T0001713;Name=USP9YP8
CHM13_chrY	CAT	exon	22552732	22552921	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=CHM13_chrY_T0001713;gene_id=CHM13_chrY_G0000581;Parent=CHM13_chrY_T0001713;transcript_name=CHM13_chrY_T0001713;gene_name=USP9YP8;ID=exon:CHM13_chrY_T0001713:0;Name=USP9YP8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22552922	22554485	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=CHM13_chrY_T0001713;gene_id=CHM13_chrY_G0000581;Parent=CHM13_chrY_T0001713;transcript_name=CHM13_chrY_T0001713;gene_name=USP9YP8;ID=intron:CHM13_chrY_T0001713:0;Name=USP9YP8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22554486	22554709	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=CHM13_chrY_T0001713;gene_id=CHM13_chrY_G0000581;Parent=CHM13_chrY_T0001713;transcript_name=CHM13_chrY_T0001713;gene_name=USP9YP8;ID=exon:CHM13_chrY_T0001713:1;Name=USP9YP8;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22554710	22556518	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=CHM13_chrY_T0001713;gene_id=CHM13_chrY_G0000581;Parent=CHM13_chrY_T0001713;transcript_name=CHM13_chrY_T0001713;gene_name=USP9YP8;ID=intron:CHM13_chrY_T0001713:1;Name=USP9YP8;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22556519	22556604	.	-	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1,ENST00000441913.1;transcript_id=CHM13_chrY_T0001713;gene_id=CHM13_chrY_G0000581;Parent=CHM13_chrY_T0001713;transcript_name=CHM13_chrY_T0001713;gene_name=USP9YP8;ID=exon:CHM13_chrY_T0001713:2;Name=USP9YP8;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22572060	22573710	.	+	.	source_gene_common_name=CDY11P;source_gene=ENSG00000230029.1;alternative_source_transcripts=ENST00000447168.1,ENST00000447168.1;gene_id=CHM13_chrY_G0000582;gene_biotype=unprocessed_pseudogene;gene_name=CDY11P;gene_sources=liftoff;ID=CHM13_chrY_G0000582;Name=CDY11P
CHM13_chrY	CAT	transcript	22572060	22573710	1000	+	.	source_transcript=ENST00000447168.1;source_transcript_name=CDY11P-201;source_gene=ENSG00000230029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447168.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY11P;alternative_source_transcripts=ENST00000447168.1,ENST00000447168.1;transcript_id=CHM13_chrY_T0001714;gene_id=CHM13_chrY_G0000582;Parent=CHM13_chrY_G0000582;transcript_name=CHM13_chrY_T0001714;gene_name=CDY11P;ID=CHM13_chrY_T0001714;Name=CDY11P
CHM13_chrY	CAT	exon	22572060	22573710	.	+	.	source_transcript=ENST00000447168.1;source_transcript_name=CDY11P-201;source_gene=ENSG00000230029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY11P;alternative_source_transcripts=ENST00000447168.1,ENST00000447168.1;transcript_id=CHM13_chrY_T0001714;gene_id=CHM13_chrY_G0000582;Parent=CHM13_chrY_T0001714;transcript_name=CHM13_chrY_T0001714;gene_name=CDY11P;ID=exon:CHM13_chrY_T0001714:0;Name=CDY11P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22653091	22653730	.	-	.	source_gene_common_name=OFD1P16Y;source_gene=ENSG00000277519.1;alternative_source_transcripts=ENST00000620993.1;gene_id=CHM13_chrY_G0000583;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P16Y;gene_sources=liftoff;ID=CHM13_chrY_G0000583;Name=OFD1P16Y
CHM13_chrY	CAT	transcript	22653091	22653730	1000	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=CHM13_chrY_T0001715;gene_id=CHM13_chrY_G0000583;Parent=CHM13_chrY_G0000583;transcript_name=CHM13_chrY_T0001715;gene_name=OFD1P16Y;ID=CHM13_chrY_T0001715;Name=OFD1P16Y
CHM13_chrY	CAT	exon	22653091	22653267	.	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=CHM13_chrY_T0001715;gene_id=CHM13_chrY_G0000583;Parent=CHM13_chrY_T0001715;transcript_name=CHM13_chrY_T0001715;gene_name=OFD1P16Y;ID=exon:CHM13_chrY_T0001715:0;Name=OFD1P16Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22653268	22653589	.	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=CHM13_chrY_T0001715;gene_id=CHM13_chrY_G0000583;Parent=CHM13_chrY_T0001715;transcript_name=CHM13_chrY_T0001715;gene_name=OFD1P16Y;ID=intron:CHM13_chrY_T0001715:0;Name=OFD1P16Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22653590	22653730	.	-	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=CHM13_chrY_T0001715;gene_id=CHM13_chrY_G0000583;Parent=CHM13_chrY_T0001715;transcript_name=CHM13_chrY_T0001715;gene_name=OFD1P16Y;ID=exon:CHM13_chrY_T0001715:1;Name=OFD1P16Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22660770	22682231	.	+	.	source_gene_common_name=ENSG00000286187;source_gene=ENSG00000286187.2;alternative_source_transcripts=ENST00000807569.1;gene_id=CHM13_chrY_G0000584;gene_biotype=lncRNA;gene_name=ENSG00000286187;gene_sources=liftoff;ID=CHM13_chrY_G0000584;Name=ENSG00000286187
CHM13_chrY	CAT	transcript	22660770	22674681	1000	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=CHM13_chrY_T0001716;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_G0000584;transcript_name=CHM13_chrY_T0001716;gene_name=ENSG00000286187;ID=CHM13_chrY_T0001716;Name=ENSG00000286187
CHM13_chrY	CAT	exon	22660770	22661088	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=CHM13_chrY_T0001716;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001716;transcript_name=CHM13_chrY_T0001716;gene_name=ENSG00000286187;ID=exon:CHM13_chrY_T0001716:0;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22661089	22674189	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=CHM13_chrY_T0001716;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001716;transcript_name=CHM13_chrY_T0001716;gene_name=ENSG00000286187;ID=intron:CHM13_chrY_T0001716:0;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22674190	22674349	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=CHM13_chrY_T0001716;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001716;transcript_name=CHM13_chrY_T0001716;gene_name=ENSG00000286187;ID=exon:CHM13_chrY_T0001716:1;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22674350	22674509	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=CHM13_chrY_T0001716;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001716;transcript_name=CHM13_chrY_T0001716;gene_name=ENSG00000286187;ID=intron:CHM13_chrY_T0001716:1;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22674510	22674681	.	+	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=CHM13_chrY_T0001716;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001716;transcript_name=CHM13_chrY_T0001716;gene_name=ENSG00000286187;ID=exon:CHM13_chrY_T0001716:2;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22660801	22682231	1000	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_G0000584;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=CHM13_chrY_T0001717;Name=ENSG00000286187
CHM13_chrY	CAT	exon	22660801	22661088	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001717;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=exon:CHM13_chrY_T0001717:0;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22661089	22672711	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001717;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=intron:CHM13_chrY_T0001717:0;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22672712	22673017	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001717;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=exon:CHM13_chrY_T0001717:1;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22673018	22674189	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001717;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=intron:CHM13_chrY_T0001717:1;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22674190	22674349	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001717;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=exon:CHM13_chrY_T0001717:2;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22674350	22674509	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001717;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=intron:CHM13_chrY_T0001717:2;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22674510	22676675	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001717;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=exon:CHM13_chrY_T0001717:3;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22676676	22676858	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001717;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=intron:CHM13_chrY_T0001717:3;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22676859	22677020	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001717;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=exon:CHM13_chrY_T0001717:4;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22677021	22677673	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001717;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=intron:CHM13_chrY_T0001717:4;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22677674	22679038	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001717;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=exon:CHM13_chrY_T0001717:5;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22679039	22679325	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001717;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=intron:CHM13_chrY_T0001717:5;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22679326	22682231	.	+	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=299.986;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=CHM13_chrY_T0001717;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001717;transcript_name=CHM13_chrY_T0001717;gene_name=ENSG00000286187;ID=exon:CHM13_chrY_T0001717:6;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22672565	22674675	1000	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=CHM13_chrY_T0001718;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_G0000584;transcript_name=CHM13_chrY_T0001718;gene_name=ENSG00000286187;ID=CHM13_chrY_T0001718;Name=ENSG00000286187
CHM13_chrY	CAT	exon	22672565	22673017	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=CHM13_chrY_T0001718;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001718;transcript_name=CHM13_chrY_T0001718;gene_name=ENSG00000286187;ID=exon:CHM13_chrY_T0001718:0;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22673018	22674189	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=CHM13_chrY_T0001718;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001718;transcript_name=CHM13_chrY_T0001718;gene_name=ENSG00000286187;ID=intron:CHM13_chrY_T0001718:0;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22674190	22674349	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=CHM13_chrY_T0001718;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001718;transcript_name=CHM13_chrY_T0001718;gene_name=ENSG00000286187;ID=exon:CHM13_chrY_T0001718:1;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22674350	22674509	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=CHM13_chrY_T0001718;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001718;transcript_name=CHM13_chrY_T0001718;gene_name=ENSG00000286187;ID=intron:CHM13_chrY_T0001718:1;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22674510	22674675	.	+	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=CHM13_chrY_T0001718;gene_id=CHM13_chrY_G0000584;Parent=CHM13_chrY_T0001718;transcript_name=CHM13_chrY_T0001718;gene_name=ENSG00000286187;ID=exon:CHM13_chrY_T0001718:2;Name=ENSG00000286187;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22706847	22709066	.	+	.	source_gene_common_name=ENSG00000229725;source_gene=ENSG00000229725.1;alternative_source_transcripts=ENST00000414540.1;gene_id=CHM13_chrY_G0000585;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000229725;gene_sources=liftoff;ID=CHM13_chrY_G0000585;Name=ENSG00000229725
CHM13_chrY	CAT	transcript	22706847	22709066	1000	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=CHM13_chrY_T0001719;gene_id=CHM13_chrY_G0000585;Parent=CHM13_chrY_G0000585;transcript_name=CHM13_chrY_T0001719;gene_name=ENSG00000229725;ID=CHM13_chrY_T0001719;Name=ENSG00000229725
CHM13_chrY	CAT	exon	22706847	22707233	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=CHM13_chrY_T0001719;gene_id=CHM13_chrY_G0000585;Parent=CHM13_chrY_T0001719;transcript_name=CHM13_chrY_T0001719;gene_name=ENSG00000229725;ID=exon:CHM13_chrY_T0001719:0;Name=ENSG00000229725;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22707234	22708477	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=CHM13_chrY_T0001719;gene_id=CHM13_chrY_G0000585;Parent=CHM13_chrY_T0001719;transcript_name=CHM13_chrY_T0001719;gene_name=ENSG00000229725;ID=intron:CHM13_chrY_T0001719:0;Name=ENSG00000229725;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22708478	22708645	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=CHM13_chrY_T0001719;gene_id=CHM13_chrY_G0000585;Parent=CHM13_chrY_T0001719;transcript_name=CHM13_chrY_T0001719;gene_name=ENSG00000229725;ID=exon:CHM13_chrY_T0001719:1;Name=ENSG00000229725;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22708646	22709016	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=CHM13_chrY_T0001719;gene_id=CHM13_chrY_G0000585;Parent=CHM13_chrY_T0001719;transcript_name=CHM13_chrY_T0001719;gene_name=ENSG00000229725;ID=intron:CHM13_chrY_T0001719:1;Name=ENSG00000229725;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22709017	22709066	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=CHM13_chrY_T0001719;gene_id=CHM13_chrY_G0000585;Parent=CHM13_chrY_T0001719;transcript_name=CHM13_chrY_T0001719;gene_name=ENSG00000229725;ID=exon:CHM13_chrY_T0001719:2;Name=ENSG00000229725;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22715593	22730041	.	-	.	source_gene_common_name=RBMY1A1;source_gene=ENSG00000234414.8;alternative_source_transcripts=ENST00000382680.5;gene_id=CHM13_chrY_G0000586;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=CHM13_chrY_G0000586;Name=RBMY1A1
CHM13_chrY	CAT	transcript	22715593	22730041	100	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_G0000586;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=CHM13_chrY_T0001720;Name=RBMY1A1
CHM13_chrY	CAT	exon	22715593	22716169	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001720:0;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22715871	22716169	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001720:0;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	22715871	22715873	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=stop_codon:CHM13_chrY_T0001720;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22716170	22716580	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001720:0;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22716581	22716669	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001720:1;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22716581	22716669	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001720:1;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22716670	22716756	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001720:1;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22716757	22716867	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001720:2;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22716757	22716867	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001720:2;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22716868	22717788	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001720:2;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22717789	22717899	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001720:3;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22717789	22717899	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001720:3;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22717900	22718333	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001720:3;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22718334	22718444	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001720:4;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22718334	22718444	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001720:4;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22718445	22718885	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001720:4;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22718886	22718996	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001720:5;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22718886	22718996	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001720:5;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22718997	22719951	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001720:5;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22719952	22720066	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001720:6;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22719952	22720066	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001720:6;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22720067	22722076	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001720:6;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22722077	22722229	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001720:7;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22722077	22722229	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001720:7;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22722230	22724144	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001720:7;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22724145	22724322	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001720:8;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22724145	22724322	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001720:8;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22724323	22727341	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001720:8;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22727342	22727445	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001720:9;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22727342	22727445	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001720:9;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22727446	22727919	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001720:9;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22727920	22728032	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001720:10;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22727920	22728028	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001720:10;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	22728026	22728028	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=start_codon:CHM13_chrY_T0001720;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22728033	22729893	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001720:10;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22729894	22730041	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382680.5;transcript_id=CHM13_chrY_T0001720;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001720;transcript_name=CHM13_chrY_T0001720;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001720:11;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22715593	22730016	1000	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_G0000586;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=CHM13_chrY_T0001721;Name=RBMY1A1
CHM13_chrY	CAT	exon	22715593	22716169	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001721:0;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22716170	22716580	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001721:0;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22716581	22716669	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001721:1;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22716670	22716756	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001721:1;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22716757	22716867	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001721:2;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22716868	22717788	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001721:2;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22717789	22717899	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001721:3;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22717900	22718333	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001721:3;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22718334	22718444	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001721:4;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22718445	22718885	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001721:4;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22718886	22718996	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001721:5;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22718997	22719951	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001721:5;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22719952	22720066	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001721:6;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22720067	22722076	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001721:6;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22722077	22722229	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001721:7;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22722197	22722229	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001721:0;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	22722197	22722199	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=stop_codon:CHM13_chrY_T0001721;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22722230	22727341	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001721:7;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22727342	22727445	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001721:8;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22727342	22727445	.	-	2	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001721:1;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22727446	22727919	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001721:8;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22727920	22728032	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001721:9;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22727920	22728028	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=CDS:CHM13_chrY_T0001721:2;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	22728026	22728028	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=start_codon:CHM13_chrY_T0001721;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22728033	22729893	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=intron:CHM13_chrY_T0001721:9;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22729894	22730016	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382653.6;transcript_id=CHM13_chrY_T0001721;gene_id=CHM13_chrY_G0000586;Parent=CHM13_chrY_T0001721;transcript_name=CHM13_chrY_T0001721;gene_name=RBMY1A1;ID=exon:CHM13_chrY_T0001721:10;Name=RBMY1A1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22730909	22733074	.	+	.	source_gene_common_name=ENSG00000251618;source_gene=ENSG00000251618.1;alternative_source_transcripts=ENST00000509611.1;gene_id=CHM13_chrY_G0000587;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000251618;gene_sources=liftoff;ID=CHM13_chrY_G0000587;Name=ENSG00000251618
CHM13_chrY	CAT	transcript	22730909	22733074	1000	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=CHM13_chrY_T0001722;gene_id=CHM13_chrY_G0000587;Parent=CHM13_chrY_G0000587;transcript_name=CHM13_chrY_T0001722;gene_name=ENSG00000251618;ID=CHM13_chrY_T0001722;Name=ENSG00000251618
CHM13_chrY	CAT	exon	22730909	22731293	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=CHM13_chrY_T0001722;gene_id=CHM13_chrY_G0000587;Parent=CHM13_chrY_T0001722;transcript_name=CHM13_chrY_T0001722;gene_name=ENSG00000251618;ID=exon:CHM13_chrY_T0001722:0;Name=ENSG00000251618;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22731294	22732290	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=CHM13_chrY_T0001722;gene_id=CHM13_chrY_G0000587;Parent=CHM13_chrY_T0001722;transcript_name=CHM13_chrY_T0001722;gene_name=ENSG00000251618;ID=intron:CHM13_chrY_T0001722:0;Name=ENSG00000251618;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22732291	22732375	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=CHM13_chrY_T0001722;gene_id=CHM13_chrY_G0000587;Parent=CHM13_chrY_T0001722;transcript_name=CHM13_chrY_T0001722;gene_name=ENSG00000251618;ID=exon:CHM13_chrY_T0001722:1;Name=ENSG00000251618;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22732376	22732619	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=CHM13_chrY_T0001722;gene_id=CHM13_chrY_G0000587;Parent=CHM13_chrY_T0001722;transcript_name=CHM13_chrY_T0001722;gene_name=ENSG00000251618;ID=intron:CHM13_chrY_T0001722:1;Name=ENSG00000251618;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22732620	22732698	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=CHM13_chrY_T0001722;gene_id=CHM13_chrY_G0000587;Parent=CHM13_chrY_T0001722;transcript_name=CHM13_chrY_T0001722;gene_name=ENSG00000251618;ID=exon:CHM13_chrY_T0001722:2;Name=ENSG00000251618;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22732699	22732783	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=CHM13_chrY_T0001722;gene_id=CHM13_chrY_G0000587;Parent=CHM13_chrY_T0001722;transcript_name=CHM13_chrY_T0001722;gene_name=ENSG00000251618;ID=intron:CHM13_chrY_T0001722:2;Name=ENSG00000251618;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22732784	22732915	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=CHM13_chrY_T0001722;gene_id=CHM13_chrY_G0000587;Parent=CHM13_chrY_T0001722;transcript_name=CHM13_chrY_T0001722;gene_name=ENSG00000251618;ID=exon:CHM13_chrY_T0001722:3;Name=ENSG00000251618;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22732916	22733032	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=CHM13_chrY_T0001722;gene_id=CHM13_chrY_G0000587;Parent=CHM13_chrY_T0001722;transcript_name=CHM13_chrY_T0001722;gene_name=ENSG00000251618;ID=intron:CHM13_chrY_T0001722:3;Name=ENSG00000251618;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22733033	22733074	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;alternative_source_transcripts=ENST00000509611.1;transcript_id=CHM13_chrY_T0001722;gene_id=CHM13_chrY_G0000587;Parent=CHM13_chrY_T0001722;transcript_name=CHM13_chrY_T0001722;gene_name=ENSG00000251618;ID=exon:CHM13_chrY_T0001722:4;Name=ENSG00000251618;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22739133	22753545	.	-	.	source_gene_common_name=RBMY1E;source_gene=ENSG00000242389.9;alternative_source_transcripts=ENST00000358944.8;gene_id=CHM13_chrY_G0000588;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff;ID=CHM13_chrY_G0000588;Name=RBMY1E
CHM13_chrY	CAT	transcript	22739133	22753545	1000	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_G0000588;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=CHM13_chrY_T0001723;Name=RBMY1E
CHM13_chrY	CAT	exon	22739133	22739709	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001723:0;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22739710	22740120	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001723:0;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22740121	22740209	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001723:1;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22740210	22740295	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001723:1;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22740296	22740406	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001723:2;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22740407	22741327	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001723:2;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22741328	22741438	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001723:3;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22741439	22741872	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001723:3;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22741873	22741983	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001723:4;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22741984	22742424	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001723:4;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22742425	22742535	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001723:5;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22742536	22743490	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001723:5;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22743491	22743605	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001723:6;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22743606	22745615	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001723:6;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22745616	22745768	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001723:7;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22745736	22745768	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001723:0;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	22745736	22745738	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=stop_codon:CHM13_chrY_T0001723;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22745769	22750880	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001723:7;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22750881	22750984	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001723:8;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22750881	22750984	.	-	2	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001723:1;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22750985	22751448	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001723:8;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22751449	22751561	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001723:9;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22751449	22751557	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001723:2;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	22751555	22751557	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=start_codon:CHM13_chrY_T0001723;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22751562	22753422	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001723:9;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22753423	22753545	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000358944.8;transcript_id=CHM13_chrY_T0001723;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001723;transcript_name=CHM13_chrY_T0001723;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001723:10;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22739135	22753535	100	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_G0000588;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=CHM13_chrY_T0001724;Name=RBMY1E
CHM13_chrY	CAT	exon	22739135	22739709	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001724:0;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22739411	22739709	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001724:0;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	22739411	22739413	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=stop_codon:CHM13_chrY_T0001724;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22739710	22740120	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001724:0;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22740121	22740209	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001724:1;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22740121	22740209	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001724:1;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22740210	22741327	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001724:1;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22741328	22741438	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001724:2;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22741328	22741438	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001724:2;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22741439	22741872	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001724:2;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22741873	22741983	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001724:3;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22741873	22741983	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001724:3;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22741984	22742424	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001724:3;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22742425	22742535	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001724:4;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22742425	22742535	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001724:4;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22742536	22743490	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001724:4;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22743491	22743605	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001724:5;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22743491	22743605	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001724:5;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22743606	22745615	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001724:5;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22745616	22745768	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001724:6;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22745616	22745768	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001724:6;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22745769	22747683	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001724:6;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22747684	22747861	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001724:7;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22747684	22747861	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001724:7;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22747862	22750880	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001724:7;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22750881	22750984	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001724:8;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22750881	22750984	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001724:8;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22750985	22751448	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001724:8;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22751449	22751561	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001724:9;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22751449	22751557	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001724:9;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	22751555	22751557	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=start_codon:CHM13_chrY_T0001724;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22751562	22753422	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001724:9;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22753423	22753535	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382658.5;transcript_id=CHM13_chrY_T0001724;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001724;transcript_name=CHM13_chrY_T0001724;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001724:10;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22739137	22753535	100	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_G0000588;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=CHM13_chrY_T0001725;Name=RBMY1E
CHM13_chrY	CAT	exon	22739137	22739709	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001725:0;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22739411	22739709	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001725:0;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	22739411	22739413	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=stop_codon:CHM13_chrY_T0001725;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22739710	22740120	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001725:0;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22740121	22740209	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001725:1;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22740121	22740209	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001725:1;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22740210	22740295	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001725:1;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22740296	22740406	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001725:2;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22740296	22740406	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001725:2;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22740407	22741327	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001725:2;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22741328	22741438	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001725:3;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22741328	22741438	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001725:3;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22741439	22741872	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001725:3;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22741873	22741983	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001725:4;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22741873	22741983	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001725:4;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22741984	22742424	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001725:4;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22742425	22742535	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001725:5;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22742425	22742535	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001725:5;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22742536	22743490	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001725:5;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22743491	22743605	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001725:6;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22743491	22743605	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001725:6;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22743606	22745615	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001725:6;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22745616	22745768	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001725:7;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22745616	22745768	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001725:7;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22745769	22747683	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001725:7;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22747684	22747861	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001725:8;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22747684	22747861	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001725:8;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22747862	22750880	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001725:8;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22750881	22750984	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001725:9;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22750881	22750984	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001725:9;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22750985	22751448	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001725:9;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22751449	22751561	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001725:10;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	22751449	22751557	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=CDS:CHM13_chrY_T0001725:10;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	22751555	22751557	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=start_codon:CHM13_chrY_T0001725;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22751562	22753422	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=intron:CHM13_chrY_T0001725:10;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22753423	22753535	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382659.7;transcript_id=CHM13_chrY_T0001725;gene_id=CHM13_chrY_G0000588;Parent=CHM13_chrY_T0001725;transcript_name=CHM13_chrY_T0001725;gene_name=RBMY1E;ID=exon:CHM13_chrY_T0001725:11;Name=RBMY1E;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22754438	22756609	.	+	.	source_gene_common_name=ENSG00000227444;source_gene=ENSG00000227444.1;gene_id=CHM13_chrY_G0000589;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000227444;gene_sources=liftoff,transMap;ID=CHM13_chrY_G0000589;Name=ENSG00000227444
CHM13_chrY	CAT	transcript	22754438	22756609	1000	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001726;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_G0000589;transcript_name=CHM13_chrY_T0001726;gene_name=ENSG00000227444;ID=CHM13_chrY_T0001726;Name=ENSG00000227444
CHM13_chrY	CAT	exon	22754438	22754831	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001726;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001726;transcript_name=CHM13_chrY_T0001726;gene_name=ENSG00000227444;ID=exon:CHM13_chrY_T0001726:0;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22754832	22755819	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001726;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001726;transcript_name=CHM13_chrY_T0001726;gene_name=ENSG00000227444;ID=intron:CHM13_chrY_T0001726:0;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22755820	22755904	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001726;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001726;transcript_name=CHM13_chrY_T0001726;gene_name=ENSG00000227444;ID=exon:CHM13_chrY_T0001726:1;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22755905	22756148	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001726;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001726;transcript_name=CHM13_chrY_T0001726;gene_name=ENSG00000227444;ID=intron:CHM13_chrY_T0001726:1;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22756149	22756444	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001726;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001726;transcript_name=CHM13_chrY_T0001726;gene_name=ENSG00000227444;ID=exon:CHM13_chrY_T0001726:2;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22756445	22756561	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001726;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001726;transcript_name=CHM13_chrY_T0001726;gene_name=ENSG00000227444;ID=intron:CHM13_chrY_T0001726:2;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22756562	22756609	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001726;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001726;transcript_name=CHM13_chrY_T0001726;gene_name=ENSG00000227444;ID=exon:CHM13_chrY_T0001726:3;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22754438	22756609	1000	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001727;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_G0000589;transcript_name=CHM13_chrY_T0001727;gene_name=ENSG00000227444;ID=CHM13_chrY_T0001727;Name=ENSG00000227444
CHM13_chrY	CAT	exon	22754438	22754831	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001727;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001727;transcript_name=CHM13_chrY_T0001727;gene_name=ENSG00000227444;ID=exon:CHM13_chrY_T0001727:0;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22754832	22755819	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001727;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001727;transcript_name=CHM13_chrY_T0001727;gene_name=ENSG00000227444;ID=intron:CHM13_chrY_T0001727:0;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22755820	22755904	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001727;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001727;transcript_name=CHM13_chrY_T0001727;gene_name=ENSG00000227444;ID=exon:CHM13_chrY_T0001727:1;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22755905	22756148	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001727;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001727;transcript_name=CHM13_chrY_T0001727;gene_name=ENSG00000227444;ID=intron:CHM13_chrY_T0001727:1;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22756149	22756227	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001727;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001727;transcript_name=CHM13_chrY_T0001727;gene_name=ENSG00000227444;ID=exon:CHM13_chrY_T0001727:2;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22756228	22756300	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001727;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001727;transcript_name=CHM13_chrY_T0001727;gene_name=ENSG00000227444;ID=intron:CHM13_chrY_T0001727:2;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22756301	22756444	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001727;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001727;transcript_name=CHM13_chrY_T0001727;gene_name=ENSG00000227444;ID=exon:CHM13_chrY_T0001727:3;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22756445	22756561	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001727;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001727;transcript_name=CHM13_chrY_T0001727;gene_name=ENSG00000227444;ID=intron:CHM13_chrY_T0001727:3;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22756562	22756609	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=CHM13_chrY_T0001727;gene_id=CHM13_chrY_G0000589;Parent=CHM13_chrY_T0001727;transcript_name=CHM13_chrY_T0001727;gene_name=ENSG00000227444;ID=exon:CHM13_chrY_T0001727:4;Name=ENSG00000227444;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22763024	22772658	.	-	.	source_gene_common_name=RBMY2AP;source_gene=ENSG00000226092.4;gene_id=CHM13_chrY_G0000590;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2AP;gene_sources=liftoff;ID=CHM13_chrY_G0000590;Name=RBMY2AP
CHM13_chrY	CAT	transcript	22763024	22772658	1000	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_G0000590;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=CHM13_chrY_T0001728;Name=RBMY2AP
CHM13_chrY	CAT	exon	22763024	22763322	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=exon:CHM13_chrY_T0001728:0;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22763323	22763746	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=intron:CHM13_chrY_T0001728:0;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22763747	22763834	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=exon:CHM13_chrY_T0001728:1;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22763835	22763916	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=intron:CHM13_chrY_T0001728:1;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22763917	22764027	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=exon:CHM13_chrY_T0001728:2;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22764028	22764896	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=intron:CHM13_chrY_T0001728:2;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22764897	22765011	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=exon:CHM13_chrY_T0001728:3;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22765012	22767018	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=intron:CHM13_chrY_T0001728:3;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22767019	22767171	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=exon:CHM13_chrY_T0001728:4;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22767172	22769106	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=intron:CHM13_chrY_T0001728:4;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22769107	22769284	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=exon:CHM13_chrY_T0001728:5;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22769285	22771992	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=intron:CHM13_chrY_T0001728:5;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22771993	22772096	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=exon:CHM13_chrY_T0001728:6;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22772097	22772549	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=intron:CHM13_chrY_T0001728:6;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22772550	22772658	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=CHM13_chrY_T0001728;gene_id=CHM13_chrY_G0000590;Parent=CHM13_chrY_T0001728;transcript_name=CHM13_chrY_T0001728;gene_name=RBMY2AP;ID=exon:CHM13_chrY_T0001728:7;Name=RBMY2AP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22764814	22774660	.	-	.	source_gene_common_name=ENSG00000295847;source_gene=ENSG00000295847.1;gene_id=CHM13_chrY_G0000591;gene_biotype=lncRNA;gene_name=ENSG00000295847;gene_sources=liftoff;ID=CHM13_chrY_G0000591;Name=ENSG00000295847
CHM13_chrY	CAT	transcript	22764814	22774660	1000	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_G0000591;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=CHM13_chrY_T0001729;Name=ENSG00000295847
CHM13_chrY	CAT	exon	22764814	22765011	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001729;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001729:0;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22765012	22767018	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001729;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=intron:CHM13_chrY_T0001729:0;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22767019	22767171	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001729;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001729:1;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22767172	22769106	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001729;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=intron:CHM13_chrY_T0001729:1;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22769107	22769284	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001729;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001729:2;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22769285	22771992	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001729;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=intron:CHM13_chrY_T0001729:2;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22771993	22772096	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001729;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001729:3;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22772097	22772549	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001729;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=intron:CHM13_chrY_T0001729:3;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22772550	22772662	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001729;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001729:4;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22772663	22773676	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001729;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=intron:CHM13_chrY_T0001729:4;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22773677	22773756	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001729;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001729:5;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22773757	22774510	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001729;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=intron:CHM13_chrY_T0001729:5;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22774511	22774660	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001729;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001729;transcript_name=CHM13_chrY_T0001729;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001729:6;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22766183	22774629	1000	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_G0000591;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=CHM13_chrY_T0001730;Name=ENSG00000295847
CHM13_chrY	CAT	exon	22766183	22766440	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001730;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001730:0;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22766441	22767018	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001730;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=intron:CHM13_chrY_T0001730:0;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22767019	22767171	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001730;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001730:1;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22767172	22769106	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001730;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=intron:CHM13_chrY_T0001730:1;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22769107	22769284	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001730;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001730:2;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22769285	22771992	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001730;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=intron:CHM13_chrY_T0001730:2;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22771993	22772096	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001730;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001730:3;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22772097	22772549	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001730;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=intron:CHM13_chrY_T0001730:3;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22772550	22772662	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001730;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001730:4;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22772663	22773676	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001730;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=intron:CHM13_chrY_T0001730:4;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22773677	22773756	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001730;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001730:5;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22773757	22774510	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001730;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=intron:CHM13_chrY_T0001730:5;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22774511	22774629	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=CHM13_chrY_T0001730;gene_id=CHM13_chrY_G0000591;Parent=CHM13_chrY_T0001730;transcript_name=CHM13_chrY_T0001730;gene_name=ENSG00000295847;ID=exon:CHM13_chrY_T0001730:6;Name=ENSG00000295847;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22775520	22777101	.	+	.	source_gene_common_name=ENSG00000237968;source_gene=ENSG00000237968.1;alternative_source_transcripts=ENST00000426526.1;gene_id=CHM13_chrY_G0000592;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000237968;gene_sources=liftoff;ID=CHM13_chrY_G0000592;Name=ENSG00000237968
CHM13_chrY	CAT	transcript	22775520	22777101	1000	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=CHM13_chrY_T0001731;gene_id=CHM13_chrY_G0000592;Parent=CHM13_chrY_G0000592;transcript_name=CHM13_chrY_T0001731;gene_name=ENSG00000237968;ID=CHM13_chrY_T0001731;Name=ENSG00000237968
CHM13_chrY	CAT	exon	22775520	22775851	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=CHM13_chrY_T0001731;gene_id=CHM13_chrY_G0000592;Parent=CHM13_chrY_T0001731;transcript_name=CHM13_chrY_T0001731;gene_name=ENSG00000237968;ID=exon:CHM13_chrY_T0001731:0;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22775852	22776330	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=CHM13_chrY_T0001731;gene_id=CHM13_chrY_G0000592;Parent=CHM13_chrY_T0001731;transcript_name=CHM13_chrY_T0001731;gene_name=ENSG00000237968;ID=intron:CHM13_chrY_T0001731:0;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22776331	22776369	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=CHM13_chrY_T0001731;gene_id=CHM13_chrY_G0000592;Parent=CHM13_chrY_T0001731;transcript_name=CHM13_chrY_T0001731;gene_name=ENSG00000237968;ID=exon:CHM13_chrY_T0001731:1;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22776370	22776567	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=CHM13_chrY_T0001731;gene_id=CHM13_chrY_G0000592;Parent=CHM13_chrY_T0001731;transcript_name=CHM13_chrY_T0001731;gene_name=ENSG00000237968;ID=intron:CHM13_chrY_T0001731:1;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22776568	22776677	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=CHM13_chrY_T0001731;gene_id=CHM13_chrY_G0000592;Parent=CHM13_chrY_T0001731;transcript_name=CHM13_chrY_T0001731;gene_name=ENSG00000237968;ID=exon:CHM13_chrY_T0001731:2;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22776678	22776764	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=CHM13_chrY_T0001731;gene_id=CHM13_chrY_G0000592;Parent=CHM13_chrY_T0001731;transcript_name=CHM13_chrY_T0001731;gene_name=ENSG00000237968;ID=intron:CHM13_chrY_T0001731:2;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22776765	22776908	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=CHM13_chrY_T0001731;gene_id=CHM13_chrY_G0000592;Parent=CHM13_chrY_T0001731;transcript_name=CHM13_chrY_T0001731;gene_name=ENSG00000237968;ID=exon:CHM13_chrY_T0001731:3;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22776909	22777025	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=CHM13_chrY_T0001731;gene_id=CHM13_chrY_G0000592;Parent=CHM13_chrY_T0001731;transcript_name=CHM13_chrY_T0001731;gene_name=ENSG00000237968;ID=intron:CHM13_chrY_T0001731:3;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22777026	22777101	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=CHM13_chrY_T0001731;gene_id=CHM13_chrY_G0000592;Parent=CHM13_chrY_T0001731;transcript_name=CHM13_chrY_T0001731;gene_name=ENSG00000237968;ID=exon:CHM13_chrY_T0001731:4;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22780875	22786330	.	-	.	source_gene_common_name=ENSG00000299625;source_gene=ENSG00000299625.1;gene_id=CHM13_chrY_G0000593;gene_biotype=lncRNA;gene_name=ENSG00000299625;gene_sources=liftoff;ID=CHM13_chrY_G0000593;Name=ENSG00000299625
CHM13_chrY	CAT	transcript	22780875	22786329	1000	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001732;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_G0000593;transcript_name=CHM13_chrY_T0001732;gene_name=ENSG00000299625;ID=CHM13_chrY_T0001732;Name=ENSG00000299625
CHM13_chrY	CAT	exon	22780875	22781580	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001732;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_T0001732;transcript_name=CHM13_chrY_T0001732;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001732:0;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22781581	22781944	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001732;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_T0001732;transcript_name=CHM13_chrY_T0001732;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001732:0;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22781945	22782071	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001732;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_T0001732;transcript_name=CHM13_chrY_T0001732;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001732:1;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22782072	22783940	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001732;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_T0001732;transcript_name=CHM13_chrY_T0001732;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001732:1;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22783941	22784074	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001732;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_T0001732;transcript_name=CHM13_chrY_T0001732;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001732:2;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22784075	22785990	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001732;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_T0001732;transcript_name=CHM13_chrY_T0001732;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001732:2;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22785991	22786329	.	-	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001732;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_T0001732;transcript_name=CHM13_chrY_T0001732;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001732:3;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22780881	22786330	1000	-	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001733;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_G0000593;transcript_name=CHM13_chrY_T0001733;gene_name=ENSG00000299625;ID=CHM13_chrY_T0001733;Name=ENSG00000299625
CHM13_chrY	CAT	exon	22780881	22781580	.	-	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001733;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_T0001733;transcript_name=CHM13_chrY_T0001733;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001733:0;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22781581	22781944	.	-	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001733;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_T0001733;transcript_name=CHM13_chrY_T0001733;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001733:0;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22781945	22782071	.	-	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001733;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_T0001733;transcript_name=CHM13_chrY_T0001733;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001733:1;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22782072	22785990	.	-	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001733;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_T0001733;transcript_name=CHM13_chrY_T0001733;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001733:1;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22785991	22786330	.	-	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001733;gene_id=CHM13_chrY_G0000593;Parent=CHM13_chrY_T0001733;transcript_name=CHM13_chrY_T0001733;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001733:2;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22807825	22840859	.	+	.	source_gene_common_name=OFD1P8Y;source_gene=ENSG00000231159.1;alternative_source_transcripts=ENST00000449148.1;gene_id=CHM13_chrY_G0000594;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P8Y;gene_sources=liftoff;ID=CHM13_chrY_G0000594;Name=OFD1P8Y
CHM13_chrY	CAT	transcript	22807825	22840859	1000	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_G0000594;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=CHM13_chrY_T0001734;Name=OFD1P8Y
CHM13_chrY	CAT	exon	22807825	22807931	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=exon:CHM13_chrY_T0001734:0;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22807932	22809443	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=intron:CHM13_chrY_T0001734:0;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22809444	22809571	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=exon:CHM13_chrY_T0001734:1;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22809572	22810105	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=intron:CHM13_chrY_T0001734:1;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22810106	22810215	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=exon:CHM13_chrY_T0001734:2;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22810216	22811932	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=intron:CHM13_chrY_T0001734:2;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22811933	22812548	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=exon:CHM13_chrY_T0001734:3;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22812549	22812921	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=intron:CHM13_chrY_T0001734:3;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22812922	22813032	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=exon:CHM13_chrY_T0001734:4;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22813033	22832372	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=intron:CHM13_chrY_T0001734:4;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22832373	22832473	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=exon:CHM13_chrY_T0001734:5;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22832474	22839105	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=intron:CHM13_chrY_T0001734:5;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22839106	22839257	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=exon:CHM13_chrY_T0001734:6;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22839258	22840453	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=intron:CHM13_chrY_T0001734:6;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22840454	22840519	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=exon:CHM13_chrY_T0001734:7;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22840520	22840817	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=intron:CHM13_chrY_T0001734:7;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22840818	22840859	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=CHM13_chrY_T0001734;gene_id=CHM13_chrY_G0000594;Parent=CHM13_chrY_T0001734;transcript_name=CHM13_chrY_T0001734;gene_name=OFD1P8Y;ID=exon:CHM13_chrY_T0001734:8;Name=OFD1P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22836646	22884997	.	-	.	source_gene_common_name=ENSG00000310035;source_gene=ENSG00000310035.1;gene_id=CHM13_chrY_G0000595;gene_biotype=lncRNA;gene_name=ENSG00000310035;gene_sources=liftoff;ID=CHM13_chrY_G0000595;Name=ENSG00000310035
CHM13_chrY	CAT	transcript	22836646	22884936	1000	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001735;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_G0000595;transcript_name=CHM13_chrY_T0001735;gene_name=ENSG00000310035;ID=CHM13_chrY_T0001735;Name=ENSG00000310035
CHM13_chrY	CAT	exon	22836646	22836920	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001735;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001735;transcript_name=CHM13_chrY_T0001735;gene_name=ENSG00000310035;ID=exon:CHM13_chrY_T0001735:0;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22836921	22844466	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001735;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001735;transcript_name=CHM13_chrY_T0001735;gene_name=ENSG00000310035;ID=intron:CHM13_chrY_T0001735:0;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22844467	22844769	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001735;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001735;transcript_name=CHM13_chrY_T0001735;gene_name=ENSG00000310035;ID=exon:CHM13_chrY_T0001735:1;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22844770	22879946	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001735;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001735;transcript_name=CHM13_chrY_T0001735;gene_name=ENSG00000310035;ID=intron:CHM13_chrY_T0001735:1;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22879947	22880108	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001735;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001735;transcript_name=CHM13_chrY_T0001735;gene_name=ENSG00000310035;ID=exon:CHM13_chrY_T0001735:2;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22880109	22884672	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001735;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001735;transcript_name=CHM13_chrY_T0001735;gene_name=ENSG00000310035;ID=intron:CHM13_chrY_T0001735:2;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22884673	22884936	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001735;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001735;transcript_name=CHM13_chrY_T0001735;gene_name=ENSG00000310035;ID=exon:CHM13_chrY_T0001735:3;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22844141	22884997	1000	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001736;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_G0000595;transcript_name=CHM13_chrY_T0001736;gene_name=ENSG00000310035;ID=CHM13_chrY_T0001736;Name=ENSG00000310035
CHM13_chrY	CAT	exon	22844141	22844769	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001736;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001736;transcript_name=CHM13_chrY_T0001736;gene_name=ENSG00000310035;ID=exon:CHM13_chrY_T0001736:0;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22844770	22879946	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001736;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001736;transcript_name=CHM13_chrY_T0001736;gene_name=ENSG00000310035;ID=intron:CHM13_chrY_T0001736:0;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22879947	22880108	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001736;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001736;transcript_name=CHM13_chrY_T0001736;gene_name=ENSG00000310035;ID=exon:CHM13_chrY_T0001736:1;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22880109	22884672	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001736;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001736;transcript_name=CHM13_chrY_T0001736;gene_name=ENSG00000310035;ID=intron:CHM13_chrY_T0001736:1;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22884673	22884997	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001736;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001736;transcript_name=CHM13_chrY_T0001736;gene_name=ENSG00000310035;ID=exon:CHM13_chrY_T0001736:2;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22861643	22884983	1000	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001737;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_G0000595;transcript_name=CHM13_chrY_T0001737;gene_name=ENSG00000310035;ID=CHM13_chrY_T0001737;Name=ENSG00000310035
CHM13_chrY	CAT	exon	22861643	22862010	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001737;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001737;transcript_name=CHM13_chrY_T0001737;gene_name=ENSG00000310035;ID=exon:CHM13_chrY_T0001737:0;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22862011	22884672	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001737;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001737;transcript_name=CHM13_chrY_T0001737;gene_name=ENSG00000310035;ID=intron:CHM13_chrY_T0001737:0;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22884673	22884983	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001737;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001737;transcript_name=CHM13_chrY_T0001737;gene_name=ENSG00000310035;ID=exon:CHM13_chrY_T0001737:1;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22861718	22884921	1000	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001738;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_G0000595;transcript_name=CHM13_chrY_T0001738;gene_name=ENSG00000310035;ID=CHM13_chrY_T0001738;Name=ENSG00000310035
CHM13_chrY	CAT	exon	22861718	22862010	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001738;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001738;transcript_name=CHM13_chrY_T0001738;gene_name=ENSG00000310035;ID=exon:CHM13_chrY_T0001738:0;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22862011	22879950	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001738;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001738;transcript_name=CHM13_chrY_T0001738;gene_name=ENSG00000310035;ID=intron:CHM13_chrY_T0001738:0;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22879951	22880108	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001738;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001738;transcript_name=CHM13_chrY_T0001738;gene_name=ENSG00000310035;ID=exon:CHM13_chrY_T0001738:1;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22880109	22884672	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001738;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001738;transcript_name=CHM13_chrY_T0001738;gene_name=ENSG00000310035;ID=intron:CHM13_chrY_T0001738:1;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22884673	22884921	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=CHM13_chrY_T0001738;gene_id=CHM13_chrY_G0000595;Parent=CHM13_chrY_T0001738;transcript_name=CHM13_chrY_T0001738;gene_name=ENSG00000310035;ID=exon:CHM13_chrY_T0001738:2;Name=ENSG00000310035;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22863841	22867009	.	+	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=CHM13_chrY_G0000596;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=CHM13_chrY_G0000596;Name=ENSG00000295422
CHM13_chrY	CAT	transcript	22863841	22867009	1000	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0001739;gene_id=CHM13_chrY_G0000596;Parent=CHM13_chrY_G0000596;transcript_name=CHM13_chrY_T0001739;gene_name=ENSG00000295422;ID=CHM13_chrY_T0001739;Name=ENSG00000295422
CHM13_chrY	CAT	exon	22863841	22863951	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0001739;gene_id=CHM13_chrY_G0000596;Parent=CHM13_chrY_T0001739;transcript_name=CHM13_chrY_T0001739;gene_name=ENSG00000295422;ID=exon:CHM13_chrY_T0001739:0;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22863952	22864068	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0001739;gene_id=CHM13_chrY_G0000596;Parent=CHM13_chrY_T0001739;transcript_name=CHM13_chrY_T0001739;gene_name=ENSG00000295422;ID=intron:CHM13_chrY_T0001739:0;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22864069	22864129	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0001739;gene_id=CHM13_chrY_G0000596;Parent=CHM13_chrY_T0001739;transcript_name=CHM13_chrY_T0001739;gene_name=ENSG00000295422;ID=exon:CHM13_chrY_T0001739:1;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22864130	22865664	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0001739;gene_id=CHM13_chrY_G0000596;Parent=CHM13_chrY_T0001739;transcript_name=CHM13_chrY_T0001739;gene_name=ENSG00000295422;ID=intron:CHM13_chrY_T0001739:1;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22865665	22867009	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0001739;gene_id=CHM13_chrY_G0000596;Parent=CHM13_chrY_T0001739;transcript_name=CHM13_chrY_T0001739;gene_name=ENSG00000295422;ID=exon:CHM13_chrY_T0001739:2;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22884073	22884866	.	-	.	source_gene_common_name=HSFY5P;source_gene=ENSG00000232475.1;gene_id=CHM13_chrY_G0000597;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY5P;gene_sources=liftoff;ID=CHM13_chrY_G0000597;Name=HSFY5P
CHM13_chrY	CAT	transcript	22884073	22884866	1000	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=CHM13_chrY_T0001740;gene_id=CHM13_chrY_G0000597;Parent=CHM13_chrY_G0000597;transcript_name=CHM13_chrY_T0001740;gene_name=HSFY5P;ID=CHM13_chrY_T0001740;Name=HSFY5P
CHM13_chrY	CAT	exon	22884073	22884222	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=CHM13_chrY_T0001740;gene_id=CHM13_chrY_G0000597;Parent=CHM13_chrY_T0001740;transcript_name=CHM13_chrY_T0001740;gene_name=HSFY5P;ID=exon:CHM13_chrY_T0001740:0;Name=HSFY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22884223	22884707	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=CHM13_chrY_T0001740;gene_id=CHM13_chrY_G0000597;Parent=CHM13_chrY_T0001740;transcript_name=CHM13_chrY_T0001740;gene_name=HSFY5P;ID=intron:CHM13_chrY_T0001740:0;Name=HSFY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22884708	22884866	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=CHM13_chrY_T0001740;gene_id=CHM13_chrY_G0000597;Parent=CHM13_chrY_T0001740;transcript_name=CHM13_chrY_T0001740;gene_name=HSFY5P;ID=exon:CHM13_chrY_T0001740:1;Name=HSFY5P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22885274	22893632	.	-	.	source_gene_common_name=USP9YP17;source_gene=ENSG00000229553.1;alternative_source_transcripts=ENST00000444617.1;gene_id=CHM13_chrY_G0000598;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP17;gene_sources=liftoff;ID=CHM13_chrY_G0000598;Name=USP9YP17
CHM13_chrY	CAT	transcript	22885274	22893632	1000	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=CHM13_chrY_T0001741;gene_id=CHM13_chrY_G0000598;Parent=CHM13_chrY_G0000598;transcript_name=CHM13_chrY_T0001741;gene_name=USP9YP17;ID=CHM13_chrY_T0001741;Name=USP9YP17
CHM13_chrY	CAT	exon	22885274	22885312	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=CHM13_chrY_T0001741;gene_id=CHM13_chrY_G0000598;Parent=CHM13_chrY_T0001741;transcript_name=CHM13_chrY_T0001741;gene_name=USP9YP17;ID=exon:CHM13_chrY_T0001741:0;Name=USP9YP17;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22885313	22887028	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=CHM13_chrY_T0001741;gene_id=CHM13_chrY_G0000598;Parent=CHM13_chrY_T0001741;transcript_name=CHM13_chrY_T0001741;gene_name=USP9YP17;ID=intron:CHM13_chrY_T0001741:0;Name=USP9YP17;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22887029	22887157	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=CHM13_chrY_T0001741;gene_id=CHM13_chrY_G0000598;Parent=CHM13_chrY_T0001741;transcript_name=CHM13_chrY_T0001741;gene_name=USP9YP17;ID=exon:CHM13_chrY_T0001741:1;Name=USP9YP17;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22887158	22889515	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=CHM13_chrY_T0001741;gene_id=CHM13_chrY_G0000598;Parent=CHM13_chrY_T0001741;transcript_name=CHM13_chrY_T0001741;gene_name=USP9YP17;ID=intron:CHM13_chrY_T0001741:1;Name=USP9YP17;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22889516	22889704	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=CHM13_chrY_T0001741;gene_id=CHM13_chrY_G0000598;Parent=CHM13_chrY_T0001741;transcript_name=CHM13_chrY_T0001741;gene_name=USP9YP17;ID=exon:CHM13_chrY_T0001741:2;Name=USP9YP17;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22889705	22891490	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=CHM13_chrY_T0001741;gene_id=CHM13_chrY_G0000598;Parent=CHM13_chrY_T0001741;transcript_name=CHM13_chrY_T0001741;gene_name=USP9YP17;ID=intron:CHM13_chrY_T0001741:2;Name=USP9YP17;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22891491	22891608	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=CHM13_chrY_T0001741;gene_id=CHM13_chrY_G0000598;Parent=CHM13_chrY_T0001741;transcript_name=CHM13_chrY_T0001741;gene_name=USP9YP17;ID=exon:CHM13_chrY_T0001741:3;Name=USP9YP17;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22891609	22893411	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=CHM13_chrY_T0001741;gene_id=CHM13_chrY_G0000598;Parent=CHM13_chrY_T0001741;transcript_name=CHM13_chrY_T0001741;gene_name=USP9YP17;ID=intron:CHM13_chrY_T0001741:3;Name=USP9YP17;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22893412	22893632	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=CHM13_chrY_T0001741;gene_id=CHM13_chrY_G0000598;Parent=CHM13_chrY_T0001741;transcript_name=CHM13_chrY_T0001741;gene_name=USP9YP17;ID=exon:CHM13_chrY_T0001741:4;Name=USP9YP17;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22900217	22901231	.	+	.	source_gene_common_name=CDY12P;source_gene=ENSG00000228850.1;alternative_source_transcripts=ENST00000440679.1;gene_id=CHM13_chrY_G0000599;gene_biotype=unprocessed_pseudogene;gene_name=CDY12P;gene_sources=liftoff;ID=CHM13_chrY_G0000599;Name=CDY12P
CHM13_chrY	CAT	transcript	22900217	22901231	1000	+	.	source_transcript=ENST00000440679.1;source_transcript_name=CDY12P-201;source_gene=ENSG00000228850.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228850.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440679.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY12P;alternative_source_transcripts=ENST00000440679.1;transcript_id=CHM13_chrY_T0001742;gene_id=CHM13_chrY_G0000599;Parent=CHM13_chrY_G0000599;transcript_name=CHM13_chrY_T0001742;gene_name=CDY12P;ID=CHM13_chrY_T0001742;Name=CDY12P
CHM13_chrY	CAT	exon	22900217	22901231	.	+	.	source_transcript=ENST00000440679.1;source_transcript_name=CDY12P-201;source_gene=ENSG00000228850.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228850.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440679.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY12P;alternative_source_transcripts=ENST00000440679.1;transcript_id=CHM13_chrY_T0001742;gene_id=CHM13_chrY_G0000599;Parent=CHM13_chrY_T0001742;transcript_name=CHM13_chrY_T0001742;gene_name=CDY12P;ID=exon:CHM13_chrY_T0001742:0;Name=CDY12P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22904339	22904670	.	+	.	source_gene_common_name=ELOCP15;source_gene=ENSG00000232029.1;alternative_source_transcripts=ENST00000442090.1;gene_id=CHM13_chrY_G0000600;gene_biotype=processed_pseudogene;gene_name=ELOCP15;gene_sources=liftoff;ID=CHM13_chrY_G0000600;Name=ELOCP15
CHM13_chrY	CAT	transcript	22904339	22904670	1000	+	.	source_transcript=ENST00000442090.1;source_transcript_name=ELOCP15-201;source_gene=ENSG00000232029.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232029.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP15;alternative_source_transcripts=ENST00000442090.1;transcript_id=CHM13_chrY_T0001743;gene_id=CHM13_chrY_G0000600;Parent=CHM13_chrY_G0000600;transcript_name=CHM13_chrY_T0001743;gene_name=ELOCP15;ID=CHM13_chrY_T0001743;Name=ELOCP15
CHM13_chrY	CAT	exon	22904339	22904670	.	+	.	source_transcript=ENST00000442090.1;source_transcript_name=ELOCP15-201;source_gene=ENSG00000232029.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232029.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP15;alternative_source_transcripts=ENST00000442090.1;transcript_id=CHM13_chrY_T0001743;gene_id=CHM13_chrY_G0000600;Parent=CHM13_chrY_T0001743;transcript_name=CHM13_chrY_T0001743;gene_name=ELOCP15;ID=exon:CHM13_chrY_T0001743:0;Name=ELOCP15;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22907275	22983003	.	-	.	source_gene_common_name=ENSG00000236951;source_gene=ENSG00000236951.7;alternative_source_transcripts=ENST00000303804.6;gene_id=CHM13_chrY_G0000601;gene_biotype=lncRNA;gene_name=ENSG00000236951;gene_sources=liftoff;ID=CHM13_chrY_G0000601;Name=ENSG00000236951
CHM13_chrY	CAT	transcript	22907275	22937902	1000	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=CHM13_chrY_T0001744;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_G0000601;transcript_name=CHM13_chrY_T0001744;gene_name=ENSG00000236951;ID=CHM13_chrY_T0001744;Name=ENSG00000236951
CHM13_chrY	CAT	exon	22907275	22908100	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=CHM13_chrY_T0001744;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001744;transcript_name=CHM13_chrY_T0001744;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001744:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22908101	22917590	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=CHM13_chrY_T0001744;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001744;transcript_name=CHM13_chrY_T0001744;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001744:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22917591	22917706	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=CHM13_chrY_T0001744;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001744;transcript_name=CHM13_chrY_T0001744;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001744:1;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22917707	22920281	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=CHM13_chrY_T0001744;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001744;transcript_name=CHM13_chrY_T0001744;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001744:1;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22920282	22920402	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=CHM13_chrY_T0001744;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001744;transcript_name=CHM13_chrY_T0001744;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001744:2;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22920403	22931243	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=CHM13_chrY_T0001744;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001744;transcript_name=CHM13_chrY_T0001744;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001744:2;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22931244	22931330	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=CHM13_chrY_T0001744;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001744;transcript_name=CHM13_chrY_T0001744;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001744:3;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22931331	22931431	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=CHM13_chrY_T0001744;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001744;transcript_name=CHM13_chrY_T0001744;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001744:3;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22931432	22931520	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=CHM13_chrY_T0001744;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001744;transcript_name=CHM13_chrY_T0001744;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001744:4;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22931521	22937637	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=CHM13_chrY_T0001744;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001744;transcript_name=CHM13_chrY_T0001744;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001744:4;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22937638	22937902	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=CHM13_chrY_T0001744;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001744;transcript_name=CHM13_chrY_T0001744;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001744:5;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22907275	22937902	1000	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_G0000601;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=CHM13_chrY_T0001745;Name=ENSG00000236951
CHM13_chrY	CAT	exon	22907275	22908100	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001745;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001745:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22908101	22909162	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001745;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001745:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22909163	22909277	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001745;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001745:1;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22909278	22917590	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001745;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001745:1;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22917591	22917706	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001745;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001745:2;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22917707	22920281	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001745;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001745:2;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22920282	22920402	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001745;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001745:3;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22920403	22931243	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001745;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001745:3;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22931244	22931330	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001745;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001745:4;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22931331	22931431	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001745;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001745:4;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22931432	22931520	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001745;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001745:5;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22931521	22937637	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001745;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001745:5;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22937638	22937902	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=CHM13_chrY_T0001745;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001745;transcript_name=CHM13_chrY_T0001745;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001745:6;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22936347	22941402	1000	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=CHM13_chrY_T0001746;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_G0000601;transcript_name=CHM13_chrY_T0001746;gene_name=ENSG00000236951;ID=CHM13_chrY_T0001746;Name=ENSG00000236951
CHM13_chrY	CAT	exon	22936347	22936588	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=CHM13_chrY_T0001746;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001746;transcript_name=CHM13_chrY_T0001746;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001746:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22936589	22937637	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=CHM13_chrY_T0001746;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001746;transcript_name=CHM13_chrY_T0001746;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001746:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22937638	22937902	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=CHM13_chrY_T0001746;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001746;transcript_name=CHM13_chrY_T0001746;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001746:1;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22937903	22938417	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=CHM13_chrY_T0001746;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001746;transcript_name=CHM13_chrY_T0001746;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001746:1;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22938418	22938535	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=CHM13_chrY_T0001746;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001746;transcript_name=CHM13_chrY_T0001746;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001746:2;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22938536	22941282	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=CHM13_chrY_T0001746;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001746;transcript_name=CHM13_chrY_T0001746;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001746:2;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22941283	22941402	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=CHM13_chrY_T0001746;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001746;transcript_name=CHM13_chrY_T0001746;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001746:3;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22937038	22957000	1000	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=CHM13_chrY_T0001747;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_G0000601;transcript_name=CHM13_chrY_T0001747;gene_name=ENSG00000236951;ID=CHM13_chrY_T0001747;Name=ENSG00000236951
CHM13_chrY	CAT	exon	22937038	22937902	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=CHM13_chrY_T0001747;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001747;transcript_name=CHM13_chrY_T0001747;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001747:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22937903	22938417	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=CHM13_chrY_T0001747;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001747;transcript_name=CHM13_chrY_T0001747;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001747:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22938418	22938539	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=CHM13_chrY_T0001747;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001747;transcript_name=CHM13_chrY_T0001747;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001747:1;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22938540	22956803	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=CHM13_chrY_T0001747;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001747;transcript_name=CHM13_chrY_T0001747;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001747:1;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22956804	22957000	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=CHM13_chrY_T0001747;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001747;transcript_name=CHM13_chrY_T0001747;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001747:2;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22937225	22983003	1000	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_G0000601;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=CHM13_chrY_T0001748;Name=ENSG00000236951
CHM13_chrY	CAT	exon	22937225	22937902	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001748:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22937903	22938417	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001748:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22938418	22938535	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001748:1;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22938536	22939079	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001748:1;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22939080	22939276	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001748:2;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22939277	22939396	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001748:2;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22939397	22939482	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001748:3;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22939483	22941282	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001748:3;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22941283	22941618	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001748:4;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22941619	22943084	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001748:4;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22943085	22943174	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001748:5;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22943175	22956803	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001748:5;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22956804	22957157	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001748:6;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22957158	22957587	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001748:6;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22957588	22957706	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001748:7;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22957707	22964884	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001748:7;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22964885	22964970	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001748:8;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22964971	22965278	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001748:8;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22965279	22965501	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001748:9;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22965502	22975468	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001748:9;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22975469	22975609	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001748:10;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22975610	22982158	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001748:10;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22982159	22982468	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001748:11;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22982469	22982802	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001748:11;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22982803	22983003	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=CHM13_chrY_T0001748;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001748;transcript_name=CHM13_chrY_T0001748;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001748:12;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22954998	22957010	1000	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=CHM13_chrY_T0001749;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_G0000601;transcript_name=CHM13_chrY_T0001749;gene_name=ENSG00000236951;ID=CHM13_chrY_T0001749;Name=ENSG00000236951
CHM13_chrY	CAT	exon	22954998	22955207	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=CHM13_chrY_T0001749;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001749;transcript_name=CHM13_chrY_T0001749;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001749:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22955208	22956803	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=CHM13_chrY_T0001749;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001749;transcript_name=CHM13_chrY_T0001749;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001749:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22956804	22957010	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=CHM13_chrY_T0001749;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001749;transcript_name=CHM13_chrY_T0001749;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001749:1;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22971908	22982929	1000	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=CHM13_chrY_T0001751;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_G0000601;transcript_name=CHM13_chrY_T0001751;gene_name=ENSG00000236951;ID=CHM13_chrY_T0001751;Name=ENSG00000236951
CHM13_chrY	CAT	exon	22971908	22972702	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=CHM13_chrY_T0001751;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001751;transcript_name=CHM13_chrY_T0001751;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001751:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22972703	22975468	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=CHM13_chrY_T0001751;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001751;transcript_name=CHM13_chrY_T0001751;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001751:0;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22975469	22975609	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=CHM13_chrY_T0001751;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001751;transcript_name=CHM13_chrY_T0001751;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001751:1;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22975610	22982802	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=CHM13_chrY_T0001751;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001751;transcript_name=CHM13_chrY_T0001751;gene_name=ENSG00000236951;ID=intron:CHM13_chrY_T0001751:1;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22982803	22982929	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=CHM13_chrY_T0001751;gene_id=CHM13_chrY_G0000601;Parent=CHM13_chrY_T0001751;transcript_name=CHM13_chrY_T0001751;gene_name=ENSG00000236951;ID=exon:CHM13_chrY_T0001751:2;Name=ENSG00000236951;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	22967464	22982350	.	+	.	source_gene_common_name=TTTY6B;source_gene=ENSG00000131548.8;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;gene_id=CHM13_chrY_G0000602;gene_biotype=lncRNA;gene_name=TTTY6B;gene_sources=liftoff;ID=CHM13_chrY_G0000602;Name=TTTY6B
CHM13_chrY	CAT	transcript	22967464	22982350	1000	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_G0000602;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=CHM13_chrY_T0001750;Name=TTTY6B
CHM13_chrY	CAT	exon	22967464	22967518	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001750;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001750:0;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22967519	22969897	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001750;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=intron:CHM13_chrY_T0001750:0;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22969898	22969971	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001750;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001750:1;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22969972	22974712	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001750;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=intron:CHM13_chrY_T0001750:1;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22974713	22974874	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001750;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001750:2;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22974875	22977156	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001750;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=intron:CHM13_chrY_T0001750:2;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22977157	22977317	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001750;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001750:3;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22977318	22980484	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001750;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=intron:CHM13_chrY_T0001750:3;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22980485	22980598	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001750;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001750:4;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22980599	22980816	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001750;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=intron:CHM13_chrY_T0001750:4;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22980817	22980954	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001750;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001750:5;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22980955	22982111	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001750;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=intron:CHM13_chrY_T0001750:5;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22982112	22982350	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4,ENST00000253838.4;transcript_id=CHM13_chrY_T0001750;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001750;transcript_name=CHM13_chrY_T0001750;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001750:6;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22976783	22982350	1000	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=CHM13_chrY_T0001752;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_G0000602;transcript_name=CHM13_chrY_T0001752;gene_name=TTTY6B;ID=CHM13_chrY_T0001752;Name=TTTY6B
CHM13_chrY	CAT	exon	22976783	22976912	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=CHM13_chrY_T0001752;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001752;transcript_name=CHM13_chrY_T0001752;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001752:0;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22976913	22977156	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=CHM13_chrY_T0001752;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001752;transcript_name=CHM13_chrY_T0001752;gene_name=TTTY6B;ID=intron:CHM13_chrY_T0001752:0;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22977157	22977317	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=CHM13_chrY_T0001752;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001752;transcript_name=CHM13_chrY_T0001752;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001752:1;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22977318	22980484	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=CHM13_chrY_T0001752;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001752;transcript_name=CHM13_chrY_T0001752;gene_name=TTTY6B;ID=intron:CHM13_chrY_T0001752:1;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22980485	22980598	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=CHM13_chrY_T0001752;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001752;transcript_name=CHM13_chrY_T0001752;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001752:2;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22980599	22980816	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=CHM13_chrY_T0001752;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001752;transcript_name=CHM13_chrY_T0001752;gene_name=TTTY6B;ID=intron:CHM13_chrY_T0001752:2;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22980817	22980954	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=CHM13_chrY_T0001752;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001752;transcript_name=CHM13_chrY_T0001752;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001752:3;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22980955	22981072	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=CHM13_chrY_T0001752;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001752;transcript_name=CHM13_chrY_T0001752;gene_name=TTTY6B;ID=intron:CHM13_chrY_T0001752:3;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22981073	22981163	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=CHM13_chrY_T0001752;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001752;transcript_name=CHM13_chrY_T0001752;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001752:4;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22981164	22982111	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=CHM13_chrY_T0001752;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001752;transcript_name=CHM13_chrY_T0001752;gene_name=TTTY6B;ID=intron:CHM13_chrY_T0001752:4;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22982112	22982350	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=CHM13_chrY_T0001752;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001752;transcript_name=CHM13_chrY_T0001752;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001752:5;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	22978222	22982348	1000	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=CHM13_chrY_T0001753;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_G0000602;transcript_name=CHM13_chrY_T0001753;gene_name=TTTY6B;ID=CHM13_chrY_T0001753;Name=TTTY6B
CHM13_chrY	CAT	exon	22978222	22978487	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=CHM13_chrY_T0001753;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001753;transcript_name=CHM13_chrY_T0001753;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001753:0;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	22978488	22982111	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=CHM13_chrY_T0001753;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001753;transcript_name=CHM13_chrY_T0001753;gene_name=TTTY6B;ID=intron:CHM13_chrY_T0001753:0;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	22982112	22982348	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=CHM13_chrY_T0001753;gene_id=CHM13_chrY_G0000602;Parent=CHM13_chrY_T0001753;transcript_name=CHM13_chrY_T0001753;gene_name=TTTY6B;ID=exon:CHM13_chrY_T0001753:1;Name=TTTY6B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23004065	23018511	.	-	.	source_gene_common_name=RBMY1F;source_gene=ENSG00000169800.14;alternative_source_transcripts=ENST00000303766.12;gene_id=CHM13_chrY_G0000603;gene_biotype=protein_coding;gene_name=RBMY1F;gene_sources=liftoff;ID=CHM13_chrY_G0000603;Name=RBMY1F
CHM13_chrY	CAT	transcript	23004065	23018452	100	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_G0000603;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=CHM13_chrY_T0001754;Name=RBMY1F
CHM13_chrY	CAT	exon	23004065	23004641	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001754:0;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23004343	23004641	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001754:0;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	23004343	23004345	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=stop_codon:CHM13_chrY_T0001754;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23004642	23005052	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001754:0;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23005053	23005141	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001754:1;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23005053	23005141	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001754:1;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23005142	23005227	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001754:1;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23005228	23005338	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001754:2;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23005228	23005338	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001754:2;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23005339	23006261	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001754:2;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23006262	23006372	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001754:3;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23006262	23006372	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001754:3;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23006373	23006806	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001754:3;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23006807	23006917	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001754:4;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23006807	23006917	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001754:4;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23006918	23007357	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001754:4;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23007358	23007468	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001754:5;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23007358	23007468	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001754:5;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23007469	23008423	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001754:5;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23008424	23008538	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001754:6;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23008424	23008538	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001754:6;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23008539	23010548	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001754:6;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23010549	23010701	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001754:7;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23010549	23010701	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001754:7;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23010702	23012616	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001754:7;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23012617	23012794	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001754:8;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23012617	23012794	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001754:8;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23012795	23015817	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001754:8;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23015818	23015921	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001754:9;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23015818	23015921	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001754:9;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23015922	23016389	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001754:9;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23016390	23016502	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001754:10;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23016390	23016498	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001754:10;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	23016496	23016498	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=start_codon:CHM13_chrY_T0001754;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23016503	23018363	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001754:10;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23018364	23018452	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=CHM13_chrY_T0001754;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001754;transcript_name=CHM13_chrY_T0001754;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001754:11;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23004065	23018511	100	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_G0000603;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=CHM13_chrY_T0001755;Name=RBMY1F
CHM13_chrY	CAT	exon	23004065	23004641	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001755:0;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23004343	23004641	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001755:0;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	23004343	23004345	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=stop_codon:CHM13_chrY_T0001755;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23004642	23005052	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001755:0;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23005053	23005141	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001755:1;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23005053	23005141	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001755:1;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23005142	23006261	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001755:1;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23006262	23006372	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001755:2;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23006262	23006372	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001755:2;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23006373	23006806	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001755:2;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23006807	23006917	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001755:3;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23006807	23006917	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001755:3;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23006918	23007357	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001755:3;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23007358	23007468	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001755:4;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23007358	23007468	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001755:4;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23007469	23008423	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001755:4;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23008424	23008538	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001755:5;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23008424	23008538	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001755:5;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23008539	23010548	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001755:5;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23010549	23010701	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001755:6;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23010549	23010701	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001755:6;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23010702	23012616	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001755:6;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23012617	23012794	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001755:7;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23012617	23012794	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001755:7;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23012795	23015817	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001755:7;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23015818	23015921	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001755:8;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23015818	23015921	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001755:8;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23015922	23016389	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001755:8;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23016390	23016502	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001755:9;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23016390	23016498	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=CDS:CHM13_chrY_T0001755:9;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	23016496	23016498	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=start_codon:CHM13_chrY_T0001755;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23016503	23018363	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001755:9;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23018364	23018511	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=CHM13_chrY_T0001755;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001755;transcript_name=CHM13_chrY_T0001755;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001755:10;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23004065	23018486	1000	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_G0000603;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=CHM13_chrY_T0001756;Name=RBMY1F
CHM13_chrY	CAT	exon	23004065	23004641	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001756:0;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23004642	23005052	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001756:0;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23005053	23005141	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001756:1;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23005142	23005227	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001756:1;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23005228	23005338	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001756:2;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23005339	23006261	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001756:2;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23006262	23006372	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001756:3;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23006373	23006806	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001756:3;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23006807	23006917	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001756:4;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23006918	23007357	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001756:4;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23007358	23007468	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001756:5;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23007469	23008423	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001756:5;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23008424	23008538	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001756:6;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23008539	23010548	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001756:6;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23010549	23010701	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001756:7;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23010702	23015817	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001756:7;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23015818	23015921	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001756:8;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23015922	23016389	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001756:8;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23016390	23016502	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001756:9;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23016503	23018363	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=intron:CHM13_chrY_T0001756:9;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23018364	23018486	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=CHM13_chrY_T0001756;gene_id=CHM13_chrY_G0000603;Parent=CHM13_chrY_T0001756;transcript_name=CHM13_chrY_T0001756;gene_name=RBMY1F;ID=exon:CHM13_chrY_T0001756:10;Name=RBMY1F;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23019379	23021544	.	+	.	source_gene_common_name=TSPY21P;source_gene=ENSG00000237902.1;alternative_source_transcripts=ENST00000433481.1;gene_id=CHM13_chrY_G0000604;gene_biotype=unprocessed_pseudogene;gene_name=TSPY21P;gene_sources=liftoff;ID=CHM13_chrY_G0000604;Name=TSPY21P
CHM13_chrY	CAT	transcript	23019379	23021544	1000	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=CHM13_chrY_T0001757;gene_id=CHM13_chrY_G0000604;Parent=CHM13_chrY_G0000604;transcript_name=CHM13_chrY_T0001757;gene_name=TSPY21P;ID=CHM13_chrY_T0001757;Name=TSPY21P
CHM13_chrY	CAT	exon	23019379	23019772	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=CHM13_chrY_T0001757;gene_id=CHM13_chrY_G0000604;Parent=CHM13_chrY_T0001757;transcript_name=CHM13_chrY_T0001757;gene_name=TSPY21P;ID=exon:CHM13_chrY_T0001757:0;Name=TSPY21P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23019773	23020760	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=CHM13_chrY_T0001757;gene_id=CHM13_chrY_G0000604;Parent=CHM13_chrY_T0001757;transcript_name=CHM13_chrY_T0001757;gene_name=TSPY21P;ID=intron:CHM13_chrY_T0001757:0;Name=TSPY21P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23020761	23020845	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=CHM13_chrY_T0001757;gene_id=CHM13_chrY_G0000604;Parent=CHM13_chrY_T0001757;transcript_name=CHM13_chrY_T0001757;gene_name=TSPY21P;ID=exon:CHM13_chrY_T0001757:1;Name=TSPY21P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23020846	23021089	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=CHM13_chrY_T0001757;gene_id=CHM13_chrY_G0000604;Parent=CHM13_chrY_T0001757;transcript_name=CHM13_chrY_T0001757;gene_name=TSPY21P;ID=intron:CHM13_chrY_T0001757:1;Name=TSPY21P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23021090	23021155	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=CHM13_chrY_T0001757;gene_id=CHM13_chrY_G0000604;Parent=CHM13_chrY_T0001757;transcript_name=CHM13_chrY_T0001757;gene_name=TSPY21P;ID=exon:CHM13_chrY_T0001757:2;Name=TSPY21P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23021156	23021241	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=CHM13_chrY_T0001757;gene_id=CHM13_chrY_G0000604;Parent=CHM13_chrY_T0001757;transcript_name=CHM13_chrY_T0001757;gene_name=TSPY21P;ID=intron:CHM13_chrY_T0001757:2;Name=TSPY21P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23021242	23021385	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=CHM13_chrY_T0001757;gene_id=CHM13_chrY_G0000604;Parent=CHM13_chrY_T0001757;transcript_name=CHM13_chrY_T0001757;gene_name=TSPY21P;ID=exon:CHM13_chrY_T0001757:3;Name=TSPY21P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23021386	23021502	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=CHM13_chrY_T0001757;gene_id=CHM13_chrY_G0000604;Parent=CHM13_chrY_T0001757;transcript_name=CHM13_chrY_T0001757;gene_name=TSPY21P;ID=intron:CHM13_chrY_T0001757:3;Name=TSPY21P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23021503	23021544	.	+	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=CHM13_chrY_T0001757;gene_id=CHM13_chrY_G0000604;Parent=CHM13_chrY_T0001757;transcript_name=CHM13_chrY_T0001757;gene_name=TSPY21P;ID=exon:CHM13_chrY_T0001757:4;Name=TSPY21P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23033958	23039241	.	+	.	source_gene_common_name=RBMY2UP;source_gene=ENSG00000225615.1;alternative_source_transcripts=ENST00000453474.1;gene_id=CHM13_chrY_G0000605;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2UP;gene_sources=liftoff;ID=CHM13_chrY_G0000605;Name=RBMY2UP
CHM13_chrY	CAT	transcript	23033958	23039241	1000	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=CHM13_chrY_T0001758;gene_id=CHM13_chrY_G0000605;Parent=CHM13_chrY_G0000605;transcript_name=CHM13_chrY_T0001758;gene_name=RBMY2UP;ID=CHM13_chrY_T0001758;Name=RBMY2UP
CHM13_chrY	CAT	exon	23033958	23034065	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=CHM13_chrY_T0001758;gene_id=CHM13_chrY_G0000605;Parent=CHM13_chrY_T0001758;transcript_name=CHM13_chrY_T0001758;gene_name=RBMY2UP;ID=exon:CHM13_chrY_T0001758:0;Name=RBMY2UP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23034066	23034468	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=CHM13_chrY_T0001758;gene_id=CHM13_chrY_G0000605;Parent=CHM13_chrY_T0001758;transcript_name=CHM13_chrY_T0001758;gene_name=RBMY2UP;ID=intron:CHM13_chrY_T0001758:0;Name=RBMY2UP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23034469	23034571	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=CHM13_chrY_T0001758;gene_id=CHM13_chrY_G0000605;Parent=CHM13_chrY_T0001758;transcript_name=CHM13_chrY_T0001758;gene_name=RBMY2UP;ID=exon:CHM13_chrY_T0001758:1;Name=RBMY2UP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23034572	23039128	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=CHM13_chrY_T0001758;gene_id=CHM13_chrY_G0000605;Parent=CHM13_chrY_T0001758;transcript_name=CHM13_chrY_T0001758;gene_name=RBMY2UP;ID=intron:CHM13_chrY_T0001758:1;Name=RBMY2UP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23039129	23039241	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=CHM13_chrY_T0001758;gene_id=CHM13_chrY_G0000605;Parent=CHM13_chrY_T0001758;transcript_name=CHM13_chrY_T0001758;gene_name=RBMY2UP;ID=exon:CHM13_chrY_T0001758:2;Name=RBMY2UP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23089440	23091488	.	-	.	source_gene_common_name=TTTY25P;source_gene=ENSG00000259247.1;alternative_source_transcripts=ENST00000558356.1;gene_id=CHM13_chrY_G0000606;gene_biotype=unprocessed_pseudogene;gene_name=TTTY25P;gene_sources=liftoff;ID=CHM13_chrY_G0000606;Name=TTTY25P
CHM13_chrY	CAT	transcript	23089440	23091488	1000	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=CHM13_chrY_T0001759;gene_id=CHM13_chrY_G0000606;Parent=CHM13_chrY_G0000606;transcript_name=CHM13_chrY_T0001759;gene_name=TTTY25P;ID=CHM13_chrY_T0001759;Name=TTTY25P
CHM13_chrY	CAT	exon	23089440	23090371	.	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=CHM13_chrY_T0001759;gene_id=CHM13_chrY_G0000606;Parent=CHM13_chrY_T0001759;transcript_name=CHM13_chrY_T0001759;gene_name=TTTY25P;ID=exon:CHM13_chrY_T0001759:0;Name=TTTY25P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23090372	23090915	.	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=CHM13_chrY_T0001759;gene_id=CHM13_chrY_G0000606;Parent=CHM13_chrY_T0001759;transcript_name=CHM13_chrY_T0001759;gene_name=TTTY25P;ID=intron:CHM13_chrY_T0001759:0;Name=TTTY25P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23090916	23091488	.	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=CHM13_chrY_T0001759;gene_id=CHM13_chrY_G0000606;Parent=CHM13_chrY_T0001759;transcript_name=CHM13_chrY_T0001759;gene_name=TTTY25P;ID=exon:CHM13_chrY_T0001759:1;Name=TTTY25P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23100116	23111077	.	-	.	source_gene_common_name=RBMY2FP;source_gene=ENSG00000243040.7;gene_id=CHM13_chrY_G0000607;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=CHM13_chrY_G0000607;Name=RBMY2FP
CHM13_chrY	CAT	transcript	23100116	23111077	1000	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_G0000607;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=CHM13_chrY_T0001760;Name=RBMY2FP
CHM13_chrY	CAT	exon	23100116	23100417	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001760:0;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23100418	23100831	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=intron:CHM13_chrY_T0001760:0;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23100832	23100920	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001760:1;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23100921	23101000	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=intron:CHM13_chrY_T0001760:1;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23101001	23101111	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001760:2;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23101112	23101476	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=intron:CHM13_chrY_T0001760:2;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23101477	23101578	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001760:3;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23101579	23103043	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=intron:CHM13_chrY_T0001760:3;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23103044	23103158	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001760:4;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23103159	23105193	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=intron:CHM13_chrY_T0001760:4;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23105194	23105346	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001760:5;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23105347	23107270	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=intron:CHM13_chrY_T0001760:5;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23107271	23107448	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001760:6;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23107449	23110442	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=intron:CHM13_chrY_T0001760:6;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23110443	23110546	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001760:7;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23110547	23110968	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=intron:CHM13_chrY_T0001760:7;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23110969	23111077	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001760;gene_id=CHM13_chrY_G0000607;Parent=CHM13_chrY_T0001760;transcript_name=CHM13_chrY_T0001760;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001760:8;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23105736	23113112	.	-	.	source_gene_common_name=RBMY2FP;source_gene=ENSG00000290336.2;gene_id=CHM13_chrY_G0000608;gene_biotype=lncRNA;gene_name=RBMY2FP;gene_sources=liftoff;ID=CHM13_chrY_G0000608;Name=RBMY2FP
CHM13_chrY	CAT	transcript	23105736	23113112	1000	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001761;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_G0000608;transcript_name=CHM13_chrY_T0001761;gene_name=RBMY2FP;ID=CHM13_chrY_T0001761;Name=RBMY2FP
CHM13_chrY	CAT	exon	23105736	23107448	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001761;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_T0001761;transcript_name=CHM13_chrY_T0001761;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001761:0;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23107449	23110442	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001761;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_T0001761;transcript_name=CHM13_chrY_T0001761;gene_name=RBMY2FP;ID=intron:CHM13_chrY_T0001761:0;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23110443	23110546	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001761;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_T0001761;transcript_name=CHM13_chrY_T0001761;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001761:1;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23110547	23110968	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001761;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_T0001761;transcript_name=CHM13_chrY_T0001761;gene_name=RBMY2FP;ID=intron:CHM13_chrY_T0001761:1;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23110969	23111081	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001761;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_T0001761;transcript_name=CHM13_chrY_T0001761;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001761:2;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23111082	23112970	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001761;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_T0001761;transcript_name=CHM13_chrY_T0001761;gene_name=RBMY2FP;ID=intron:CHM13_chrY_T0001761:2;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23112971	23113112	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001761;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_T0001761;transcript_name=CHM13_chrY_T0001761;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001761:3;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23110830	23113057	1000	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001762;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_G0000608;transcript_name=CHM13_chrY_T0001762;gene_name=RBMY2FP;ID=CHM13_chrY_T0001762;Name=RBMY2FP
CHM13_chrY	CAT	exon	23110830	23111081	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001762;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_T0001762;transcript_name=CHM13_chrY_T0001762;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001762:0;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23111082	23112230	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001762;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_T0001762;transcript_name=CHM13_chrY_T0001762;gene_name=RBMY2FP;ID=intron:CHM13_chrY_T0001762:0;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23112231	23112317	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001762;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_T0001762;transcript_name=CHM13_chrY_T0001762;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001762:1;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23112318	23112970	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001762;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_T0001762;transcript_name=CHM13_chrY_T0001762;gene_name=RBMY2FP;ID=intron:CHM13_chrY_T0001762:1;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23112971	23113057	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=CHM13_chrY_T0001762;gene_id=CHM13_chrY_G0000608;Parent=CHM13_chrY_T0001762;transcript_name=CHM13_chrY_T0001762;gene_name=RBMY2FP;ID=exon:CHM13_chrY_T0001762:2;Name=RBMY2FP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23113990	23116016	.	+	.	source_gene_common_name=TSPY22P;source_gene=ENSG00000229940.1;alternative_source_transcripts=ENST00000427496.1;gene_id=CHM13_chrY_G0000609;gene_biotype=unprocessed_pseudogene;gene_name=TSPY22P;gene_sources=liftoff;ID=CHM13_chrY_G0000609;Name=TSPY22P
CHM13_chrY	CAT	transcript	23113990	23116016	1000	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=CHM13_chrY_T0001763;gene_id=CHM13_chrY_G0000609;Parent=CHM13_chrY_G0000609;transcript_name=CHM13_chrY_T0001763;gene_name=TSPY22P;ID=CHM13_chrY_T0001763;Name=TSPY22P
CHM13_chrY	CAT	exon	23113990	23114381	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=CHM13_chrY_T0001763;gene_id=CHM13_chrY_G0000609;Parent=CHM13_chrY_T0001763;transcript_name=CHM13_chrY_T0001763;gene_name=TSPY22P;ID=exon:CHM13_chrY_T0001763:0;Name=TSPY22P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23114382	23115720	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=CHM13_chrY_T0001763;gene_id=CHM13_chrY_G0000609;Parent=CHM13_chrY_T0001763;transcript_name=CHM13_chrY_T0001763;gene_name=TSPY22P;ID=intron:CHM13_chrY_T0001763:0;Name=TSPY22P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23115721	23115786	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=CHM13_chrY_T0001763;gene_id=CHM13_chrY_G0000609;Parent=CHM13_chrY_T0001763;transcript_name=CHM13_chrY_T0001763;gene_name=TSPY22P;ID=exon:CHM13_chrY_T0001763:1;Name=TSPY22P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23115787	23115870	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=CHM13_chrY_T0001763;gene_id=CHM13_chrY_G0000609;Parent=CHM13_chrY_T0001763;transcript_name=CHM13_chrY_T0001763;gene_name=TSPY22P;ID=intron:CHM13_chrY_T0001763:1;Name=TSPY22P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23115871	23116016	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=CHM13_chrY_T0001763;gene_id=CHM13_chrY_G0000609;Parent=CHM13_chrY_T0001763;transcript_name=CHM13_chrY_T0001763;gene_name=TSPY22P;ID=exon:CHM13_chrY_T0001763:2;Name=TSPY22P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23123071	23125149	.	+	.	source_gene_common_name=TTTY5;source_gene=ENSG00000215560.2;alternative_source_transcripts=ENST00000400581.2;gene_id=CHM13_chrY_G0000610;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=CHM13_chrY_G0000610;Name=TTTY5
CHM13_chrY	CAT	transcript	23123071	23125149	1000	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=CHM13_chrY_T0001764;gene_id=CHM13_chrY_G0000610;Parent=CHM13_chrY_G0000610;transcript_name=CHM13_chrY_T0001764;gene_name=TTTY5;ID=CHM13_chrY_T0001764;Name=TTTY5
CHM13_chrY	CAT	exon	23123071	23123641	.	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=CHM13_chrY_T0001764;gene_id=CHM13_chrY_G0000610;Parent=CHM13_chrY_T0001764;transcript_name=CHM13_chrY_T0001764;gene_name=TTTY5;ID=exon:CHM13_chrY_T0001764:0;Name=TTTY5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23123642	23124158	.	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=CHM13_chrY_T0001764;gene_id=CHM13_chrY_G0000610;Parent=CHM13_chrY_T0001764;transcript_name=CHM13_chrY_T0001764;gene_name=TTTY5;ID=intron:CHM13_chrY_T0001764:0;Name=TTTY5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23124159	23125149	.	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=CHM13_chrY_T0001764;gene_id=CHM13_chrY_G0000610;Parent=CHM13_chrY_T0001764;transcript_name=CHM13_chrY_T0001764;gene_name=TTTY5;ID=exon:CHM13_chrY_T0001764:1;Name=TTTY5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23205471	23212720	.	-	.	source_gene_common_name=RBMY1KP;source_gene=ENSG00000229234.1;alternative_source_transcripts=ENST00000423480.1;gene_id=CHM13_chrY_G0000611;gene_biotype=unprocessed_pseudogene;gene_name=RBMY1KP;gene_sources=liftoff;ID=CHM13_chrY_G0000611;Name=RBMY1KP
CHM13_chrY	CAT	transcript	23205471	23212720	1000	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=CHM13_chrY_T0001765;gene_id=CHM13_chrY_G0000611;Parent=CHM13_chrY_G0000611;transcript_name=CHM13_chrY_T0001765;gene_name=RBMY1KP;ID=CHM13_chrY_T0001765;Name=RBMY1KP
CHM13_chrY	CAT	exon	23205471	23205585	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=CHM13_chrY_T0001765;gene_id=CHM13_chrY_G0000611;Parent=CHM13_chrY_T0001765;transcript_name=CHM13_chrY_T0001765;gene_name=RBMY1KP;ID=exon:CHM13_chrY_T0001765:0;Name=RBMY1KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23205586	23209449	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=CHM13_chrY_T0001765;gene_id=CHM13_chrY_G0000611;Parent=CHM13_chrY_T0001765;transcript_name=CHM13_chrY_T0001765;gene_name=RBMY1KP;ID=intron:CHM13_chrY_T0001765:0;Name=RBMY1KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23209450	23209626	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=CHM13_chrY_T0001765;gene_id=CHM13_chrY_G0000611;Parent=CHM13_chrY_T0001765;transcript_name=CHM13_chrY_T0001765;gene_name=RBMY1KP;ID=exon:CHM13_chrY_T0001765:1;Name=RBMY1KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23209627	23212023	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=CHM13_chrY_T0001765;gene_id=CHM13_chrY_G0000611;Parent=CHM13_chrY_T0001765;transcript_name=CHM13_chrY_T0001765;gene_name=RBMY1KP;ID=intron:CHM13_chrY_T0001765:1;Name=RBMY1KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23212024	23212094	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=CHM13_chrY_T0001765;gene_id=CHM13_chrY_G0000611;Parent=CHM13_chrY_T0001765;transcript_name=CHM13_chrY_T0001765;gene_name=RBMY1KP;ID=exon:CHM13_chrY_T0001765:2;Name=RBMY1KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23212095	23212607	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=CHM13_chrY_T0001765;gene_id=CHM13_chrY_G0000611;Parent=CHM13_chrY_T0001765;transcript_name=CHM13_chrY_T0001765;gene_name=RBMY1KP;ID=intron:CHM13_chrY_T0001765:2;Name=RBMY1KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23212608	23212720	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=CHM13_chrY_T0001765;gene_id=CHM13_chrY_G0000611;Parent=CHM13_chrY_T0001765;transcript_name=CHM13_chrY_T0001765;gene_name=RBMY1KP;ID=exon:CHM13_chrY_T0001765:3;Name=RBMY1KP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23218339	23223622	.	-	.	source_gene_common_name=RBMY2UP;source_gene=ENSG00000225615.1;alternative_source_transcripts=ENST00000453474.1;gene_id=CHM13_chrY_G0000612;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2UP;gene_sources=liftoff;ID=CHM13_chrY_G0000612;Name=RBMY2UP
CHM13_chrY	CAT	transcript	23218339	23223622	1000	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=CHM13_chrY_T0001766;gene_id=CHM13_chrY_G0000612;Parent=CHM13_chrY_G0000612;transcript_name=CHM13_chrY_T0001766;gene_name=RBMY2UP;ID=CHM13_chrY_T0001766;Name=RBMY2UP
CHM13_chrY	CAT	exon	23218339	23218451	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=CHM13_chrY_T0001766;gene_id=CHM13_chrY_G0000612;Parent=CHM13_chrY_T0001766;transcript_name=CHM13_chrY_T0001766;gene_name=RBMY2UP;ID=exon:CHM13_chrY_T0001766:0;Name=RBMY2UP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23218452	23223008	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=CHM13_chrY_T0001766;gene_id=CHM13_chrY_G0000612;Parent=CHM13_chrY_T0001766;transcript_name=CHM13_chrY_T0001766;gene_name=RBMY2UP;ID=intron:CHM13_chrY_T0001766:0;Name=RBMY2UP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23223009	23223111	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=CHM13_chrY_T0001766;gene_id=CHM13_chrY_G0000612;Parent=CHM13_chrY_T0001766;transcript_name=CHM13_chrY_T0001766;gene_name=RBMY2UP;ID=exon:CHM13_chrY_T0001766:1;Name=RBMY2UP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23223112	23223514	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=CHM13_chrY_T0001766;gene_id=CHM13_chrY_G0000612;Parent=CHM13_chrY_T0001766;transcript_name=CHM13_chrY_T0001766;gene_name=RBMY2UP;ID=intron:CHM13_chrY_T0001766:1;Name=RBMY2UP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23223515	23223622	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=CHM13_chrY_T0001766;gene_id=CHM13_chrY_G0000612;Parent=CHM13_chrY_T0001766;transcript_name=CHM13_chrY_T0001766;gene_name=RBMY2UP;ID=exon:CHM13_chrY_T0001766:2;Name=RBMY2UP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23236030	23238201	.	-	.	source_gene_common_name=TSPY23P;source_gene=ENSG00000229159.1;alternative_source_transcripts=ENST00000440136.1;gene_id=CHM13_chrY_G0000613;gene_biotype=unprocessed_pseudogene;gene_name=TSPY23P;gene_sources=liftoff;ID=CHM13_chrY_G0000613;Name=TSPY23P
CHM13_chrY	CAT	transcript	23236030	23238201	1000	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=CHM13_chrY_T0001767;gene_id=CHM13_chrY_G0000613;Parent=CHM13_chrY_G0000613;transcript_name=CHM13_chrY_T0001767;gene_name=TSPY23P;ID=CHM13_chrY_T0001767;Name=TSPY23P
CHM13_chrY	CAT	exon	23236030	23236077	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=CHM13_chrY_T0001767;gene_id=CHM13_chrY_G0000613;Parent=CHM13_chrY_T0001767;transcript_name=CHM13_chrY_T0001767;gene_name=TSPY23P;ID=exon:CHM13_chrY_T0001767:0;Name=TSPY23P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23236078	23236194	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=CHM13_chrY_T0001767;gene_id=CHM13_chrY_G0000613;Parent=CHM13_chrY_T0001767;transcript_name=CHM13_chrY_T0001767;gene_name=TSPY23P;ID=intron:CHM13_chrY_T0001767:0;Name=TSPY23P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23236195	23236338	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=CHM13_chrY_T0001767;gene_id=CHM13_chrY_G0000613;Parent=CHM13_chrY_T0001767;transcript_name=CHM13_chrY_T0001767;gene_name=TSPY23P;ID=exon:CHM13_chrY_T0001767:1;Name=TSPY23P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23236339	23236425	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=CHM13_chrY_T0001767;gene_id=CHM13_chrY_G0000613;Parent=CHM13_chrY_T0001767;transcript_name=CHM13_chrY_T0001767;gene_name=TSPY23P;ID=intron:CHM13_chrY_T0001767:1;Name=TSPY23P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23236426	23236496	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=CHM13_chrY_T0001767;gene_id=CHM13_chrY_G0000613;Parent=CHM13_chrY_T0001767;transcript_name=CHM13_chrY_T0001767;gene_name=TSPY23P;ID=exon:CHM13_chrY_T0001767:2;Name=TSPY23P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23236497	23236734	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=CHM13_chrY_T0001767;gene_id=CHM13_chrY_G0000613;Parent=CHM13_chrY_T0001767;transcript_name=CHM13_chrY_T0001767;gene_name=TSPY23P;ID=intron:CHM13_chrY_T0001767:2;Name=TSPY23P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23236735	23236816	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=CHM13_chrY_T0001767;gene_id=CHM13_chrY_G0000613;Parent=CHM13_chrY_T0001767;transcript_name=CHM13_chrY_T0001767;gene_name=TSPY23P;ID=exon:CHM13_chrY_T0001767:3;Name=TSPY23P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23236817	23237807	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=CHM13_chrY_T0001767;gene_id=CHM13_chrY_G0000613;Parent=CHM13_chrY_T0001767;transcript_name=CHM13_chrY_T0001767;gene_name=TSPY23P;ID=intron:CHM13_chrY_T0001767:3;Name=TSPY23P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23237808	23238201	.	-	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=CHM13_chrY_T0001767;gene_id=CHM13_chrY_G0000613;Parent=CHM13_chrY_T0001767;transcript_name=CHM13_chrY_T0001767;gene_name=TSPY23P;ID=exon:CHM13_chrY_T0001767:4;Name=TSPY23P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23239043	23253511	.	+	.	source_gene_common_name=RBMY1J;source_gene=ENSG00000226941.9;alternative_source_transcripts=ENST00000250831.6;gene_id=CHM13_chrY_G0000614;gene_biotype=protein_coding;gene_name=RBMY1J;gene_sources=liftoff;ID=CHM13_chrY_G0000614;Name=RBMY1J
CHM13_chrY	CAT	transcript	23239043	23253511	100	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_G0000614;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=CHM13_chrY_T0001768;Name=RBMY1J
CHM13_chrY	CAT	exon	23239043	23239216	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001768:0;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23239217	23241077	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001768:0;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23241078	23241190	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001768:1;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23241082	23241190	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=CDS:CHM13_chrY_T0001768:0;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	23241082	23241084	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=start_codon:CHM13_chrY_T0001768;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23241191	23241654	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001768:1;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23241655	23241758	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001768:2;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23241655	23241758	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=CDS:CHM13_chrY_T0001768:1;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23241759	23244781	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001768:2;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23244782	23244959	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001768:3;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23244782	23244959	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=CDS:CHM13_chrY_T0001768:2;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23244960	23246874	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001768:3;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23246875	23247027	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001768:4;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23246875	23247027	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=CDS:CHM13_chrY_T0001768:3;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23247028	23249037	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001768:4;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23249038	23249152	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001768:5;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23249038	23249152	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=CDS:CHM13_chrY_T0001768:4;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23249153	23250107	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001768:5;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23250108	23250218	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001768:6;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23250108	23250218	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=CDS:CHM13_chrY_T0001768:5;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23250219	23250658	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001768:6;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23250659	23250769	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001768:7;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23250659	23250769	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=CDS:CHM13_chrY_T0001768:6;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23250770	23251203	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001768:7;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23251204	23251314	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001768:8;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23251204	23251314	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=CDS:CHM13_chrY_T0001768:7;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23251315	23252237	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001768:8;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23252238	23252348	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001768:9;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23252238	23252348	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=CDS:CHM13_chrY_T0001768:8;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23252349	23252434	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001768:9;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23252435	23252523	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001768:10;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23252435	23252523	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=CDS:CHM13_chrY_T0001768:9;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23252524	23252934	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001768:10;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23252935	23253511	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001768:11;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23252935	23253233	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=CDS:CHM13_chrY_T0001768:10;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	23253231	23253233	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=CHM13_chrY_T0001768;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001768;transcript_name=CHM13_chrY_T0001768;gene_name=RBMY1J;ID=stop_codon:CHM13_chrY_T0001768;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23239094	23253511	1000	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_G0000614;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=CHM13_chrY_T0001769;Name=RBMY1J
CHM13_chrY	CAT	exon	23239094	23239216	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001769:0;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23239217	23241077	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001769:0;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23241078	23241190	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001769:1;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23241191	23241654	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001769:1;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23241655	23241758	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001769:2;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23241759	23246874	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001769:2;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23246875	23247027	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001769:3;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23247028	23249037	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001769:3;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23249038	23249152	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001769:4;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23249153	23250107	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001769:4;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23250108	23250218	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001769:5;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23250219	23250658	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001769:5;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23250659	23250769	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001769:6;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23250770	23251203	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001769:6;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23251204	23251314	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001769:7;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23251315	23252237	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001769:7;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23252238	23252348	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001769:8;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23252349	23252434	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001769:8;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23252435	23252523	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001769:9;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23252524	23252934	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=intron:CHM13_chrY_T0001769:9;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23252935	23253511	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=CHM13_chrY_T0001769;gene_id=CHM13_chrY_G0000614;Parent=CHM13_chrY_T0001769;transcript_name=CHM13_chrY_T0001769;gene_name=RBMY1J;ID=exon:CHM13_chrY_T0001769:10;Name=RBMY1J;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23274557	23350287	.	+	.	source_gene_common_name=ENSG00000235059;source_gene=ENSG00000235059.7;alternative_source_transcripts=ENST00000446299.6;gene_id=CHM13_chrY_G0000615;gene_biotype=lncRNA;gene_name=ENSG00000235059;gene_sources=liftoff;ID=CHM13_chrY_G0000615;Name=ENSG00000235059
CHM13_chrY	CAT	transcript	23274557	23320349	1000	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_G0000615;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=CHM13_chrY_T0001770;Name=ENSG00000235059
CHM13_chrY	CAT	exon	23274557	23274773	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001770:0;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23274774	23275107	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001770:0;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23275108	23275417	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001770:1;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23275418	23281964	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001770:1;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23281965	23282105	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001770:2;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23282106	23292072	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001770:2;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23292073	23292295	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001770:3;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23292296	23292603	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001770:3;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23292604	23292689	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001770:4;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23292690	23299867	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001770:4;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23299868	23299986	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001770:5;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23299987	23300416	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001770:5;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23300417	23300770	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001770:6;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23300771	23314399	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001770:6;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23314400	23314489	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001770:7;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23314490	23315955	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001770:7;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23315956	23316291	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001770:8;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23316292	23318091	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001770:8;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23318092	23318177	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001770:9;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23318178	23318297	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001770:9;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23318298	23318494	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001770:10;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23318495	23319038	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001770:10;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23319039	23319156	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001770:11;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23319157	23319671	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001770:11;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23319672	23320349	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=CHM13_chrY_T0001770;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001770;transcript_name=CHM13_chrY_T0001770;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001770:12;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23300574	23320536	1000	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=CHM13_chrY_T0001773;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_G0000615;transcript_name=CHM13_chrY_T0001773;gene_name=ENSG00000235059;ID=CHM13_chrY_T0001773;Name=ENSG00000235059
CHM13_chrY	CAT	exon	23300574	23300770	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=CHM13_chrY_T0001773;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001773;transcript_name=CHM13_chrY_T0001773;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001773:0;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23300771	23319034	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=CHM13_chrY_T0001773;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001773;transcript_name=CHM13_chrY_T0001773;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001773:0;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23319035	23319156	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=CHM13_chrY_T0001773;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001773;transcript_name=CHM13_chrY_T0001773;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001773:1;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23319157	23319671	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=CHM13_chrY_T0001773;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001773;transcript_name=CHM13_chrY_T0001773;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001773:1;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23319672	23320536	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=CHM13_chrY_T0001773;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001773;transcript_name=CHM13_chrY_T0001773;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001773:2;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23314328	23320529	1000	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=CHM13_chrY_T0001774;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_G0000615;transcript_name=CHM13_chrY_T0001774;gene_name=ENSG00000235059;ID=CHM13_chrY_T0001774;Name=ENSG00000235059
CHM13_chrY	CAT	exon	23314328	23314489	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=CHM13_chrY_T0001774;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001774;transcript_name=CHM13_chrY_T0001774;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001774:0;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23314490	23315955	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=CHM13_chrY_T0001774;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001774;transcript_name=CHM13_chrY_T0001774;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001774:0;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23315956	23316291	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=CHM13_chrY_T0001774;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001774;transcript_name=CHM13_chrY_T0001774;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001774:1;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23316292	23319034	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=CHM13_chrY_T0001774;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001774;transcript_name=CHM13_chrY_T0001774;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001774:1;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23319035	23319156	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=CHM13_chrY_T0001774;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001774;transcript_name=CHM13_chrY_T0001774;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001774:2;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23319157	23319671	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=CHM13_chrY_T0001774;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001774;transcript_name=CHM13_chrY_T0001774;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001774:2;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23319672	23320529	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=CHM13_chrY_T0001774;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001774;transcript_name=CHM13_chrY_T0001774;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001774:3;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23316172	23321229	1000	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=CHM13_chrY_T0001775;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_G0000615;transcript_name=CHM13_chrY_T0001775;gene_name=ENSG00000235059;ID=CHM13_chrY_T0001775;Name=ENSG00000235059
CHM13_chrY	CAT	exon	23316172	23316291	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=CHM13_chrY_T0001775;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001775;transcript_name=CHM13_chrY_T0001775;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001775:0;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23316292	23319038	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=CHM13_chrY_T0001775;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001775;transcript_name=CHM13_chrY_T0001775;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001775:0;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23319039	23319156	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=CHM13_chrY_T0001775;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001775;transcript_name=CHM13_chrY_T0001775;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001775:1;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23319157	23319671	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=CHM13_chrY_T0001775;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001775;transcript_name=CHM13_chrY_T0001775;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001775:1;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23319672	23319936	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=CHM13_chrY_T0001775;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001775;transcript_name=CHM13_chrY_T0001775;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001775:2;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23319937	23320987	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=CHM13_chrY_T0001775;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001775;transcript_name=CHM13_chrY_T0001775;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001775:2;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23320988	23321229	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=CHM13_chrY_T0001775;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001775;transcript_name=CHM13_chrY_T0001775;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001775:3;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23319672	23350287	1000	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=CHM13_chrY_T0001776;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_G0000615;transcript_name=CHM13_chrY_T0001776;gene_name=ENSG00000235059;ID=CHM13_chrY_T0001776;Name=ENSG00000235059
CHM13_chrY	CAT	exon	23319672	23319936	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=CHM13_chrY_T0001776;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001776;transcript_name=CHM13_chrY_T0001776;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001776:0;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23319937	23326033	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=CHM13_chrY_T0001776;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001776;transcript_name=CHM13_chrY_T0001776;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001776:0;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23326034	23326122	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=CHM13_chrY_T0001776;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001776;transcript_name=CHM13_chrY_T0001776;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001776:1;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23326123	23326223	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=CHM13_chrY_T0001776;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001776;transcript_name=CHM13_chrY_T0001776;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001776:1;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23326224	23326310	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=CHM13_chrY_T0001776;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001776;transcript_name=CHM13_chrY_T0001776;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001776:2;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23326311	23337151	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=CHM13_chrY_T0001776;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001776;transcript_name=CHM13_chrY_T0001776;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001776:2;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23337152	23337272	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=CHM13_chrY_T0001776;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001776;transcript_name=CHM13_chrY_T0001776;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001776:3;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23337273	23339847	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=CHM13_chrY_T0001776;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001776;transcript_name=CHM13_chrY_T0001776;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001776:3;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23339848	23339963	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=CHM13_chrY_T0001776;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001776;transcript_name=CHM13_chrY_T0001776;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001776:4;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23339964	23349461	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=CHM13_chrY_T0001776;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001776;transcript_name=CHM13_chrY_T0001776;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001776:4;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23349462	23350287	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=299.93399999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=CHM13_chrY_T0001776;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001776;transcript_name=CHM13_chrY_T0001776;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001776:5;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23319672	23350287	1000	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_G0000615;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=CHM13_chrY_T0001777;Name=ENSG00000235059
CHM13_chrY	CAT	exon	23319672	23319936	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001777;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001777:0;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23319937	23326033	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001777;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001777:0;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23326034	23326122	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001777;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001777:1;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23326123	23326223	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001777;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001777:1;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23326224	23326310	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001777;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001777:2;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23326311	23337151	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001777;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001777:2;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23337152	23337272	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001777;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001777:3;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23337273	23339847	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001777;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001777:3;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23339848	23339963	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001777;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001777:4;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23339964	23348284	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001777;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001777:4;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23348285	23348399	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001777;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001777:5;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23348400	23349461	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001777;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=intron:CHM13_chrY_T0001777:5;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23349462	23350287	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=CHM13_chrY_T0001777;gene_id=CHM13_chrY_G0000615;Parent=CHM13_chrY_T0001777;transcript_name=CHM13_chrY_T0001777;gene_name=ENSG00000235059;ID=exon:CHM13_chrY_T0001777:6;Name=ENSG00000235059;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23275226	23290110	.	-	.	source_gene_common_name=TTTY6;source_gene=ENSG00000131538.8;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;gene_id=CHM13_chrY_G0000616;gene_biotype=lncRNA;gene_name=TTTY6;gene_sources=liftoff;ID=CHM13_chrY_G0000616;Name=TTTY6
CHM13_chrY	CAT	transcript	23275226	23290110	1000	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_G0000616;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=CHM13_chrY_T0001771;Name=TTTY6
CHM13_chrY	CAT	exon	23275226	23275464	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001771;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=exon:CHM13_chrY_T0001771:0;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23275465	23276621	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001771;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=intron:CHM13_chrY_T0001771:0;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23276622	23276759	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001771;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=exon:CHM13_chrY_T0001771:1;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23276760	23276977	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001771;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=intron:CHM13_chrY_T0001771:1;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23276978	23277091	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001771;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=exon:CHM13_chrY_T0001771:2;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23277092	23280256	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001771;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=intron:CHM13_chrY_T0001771:2;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23280257	23280417	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001771;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=exon:CHM13_chrY_T0001771:3;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23280418	23282699	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001771;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=intron:CHM13_chrY_T0001771:3;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23282700	23282861	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001771;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=exon:CHM13_chrY_T0001771:4;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23282862	23287602	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001771;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=intron:CHM13_chrY_T0001771:4;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23287603	23287676	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001771;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=exon:CHM13_chrY_T0001771:5;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23287677	23290055	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001771;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=intron:CHM13_chrY_T0001771:5;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23290056	23290110	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4,ENST00000253848.4;transcript_id=CHM13_chrY_T0001771;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001771;transcript_name=CHM13_chrY_T0001771;gene_name=TTTY6;ID=exon:CHM13_chrY_T0001771:6;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23275228	23279367	1000	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=CHM13_chrY_T0001772;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_G0000616;transcript_name=CHM13_chrY_T0001772;gene_name=TTTY6;ID=CHM13_chrY_T0001772;Name=TTTY6
CHM13_chrY	CAT	exon	23275228	23275464	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=CHM13_chrY_T0001772;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001772;transcript_name=CHM13_chrY_T0001772;gene_name=TTTY6;ID=exon:CHM13_chrY_T0001772:0;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23275465	23279086	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=CHM13_chrY_T0001772;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001772;transcript_name=CHM13_chrY_T0001772;gene_name=TTTY6;ID=intron:CHM13_chrY_T0001772:0;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23279087	23279367	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=CHM13_chrY_T0001772;gene_id=CHM13_chrY_G0000616;Parent=CHM13_chrY_T0001772;transcript_name=CHM13_chrY_T0001772;gene_name=TTTY6;ID=exon:CHM13_chrY_T0001772:1;Name=TTTY6;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23352892	23353223	.	-	.	source_gene_common_name=ELOCP8;source_gene=ENSG00000234131.1;alternative_source_transcripts=ENST00000439309.1;gene_id=CHM13_chrY_G0000617;gene_biotype=processed_pseudogene;gene_name=ELOCP8;gene_sources=liftoff;ID=CHM13_chrY_G0000617;Name=ELOCP8
CHM13_chrY	CAT	transcript	23352892	23353223	1000	-	.	source_transcript=ENST00000439309.1;source_transcript_name=ELOCP8-201;source_gene=ENSG00000234131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439309.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP8;alternative_source_transcripts=ENST00000439309.1;transcript_id=CHM13_chrY_T0001778;gene_id=CHM13_chrY_G0000617;Parent=CHM13_chrY_G0000617;transcript_name=CHM13_chrY_T0001778;gene_name=ELOCP8;ID=CHM13_chrY_T0001778;Name=ELOCP8
CHM13_chrY	CAT	exon	23352892	23353223	.	-	.	source_transcript=ENST00000439309.1;source_transcript_name=ELOCP8-201;source_gene=ENSG00000234131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439309.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP8;alternative_source_transcripts=ENST00000439309.1;transcript_id=CHM13_chrY_T0001778;gene_id=CHM13_chrY_G0000617;Parent=CHM13_chrY_T0001778;transcript_name=CHM13_chrY_T0001778;gene_name=ELOCP8;ID=exon:CHM13_chrY_T0001778:0;Name=ELOCP8;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23356331	23357345	.	-	.	source_gene_common_name=CDY13P;source_gene=ENSG00000224873.1;alternative_source_transcripts=ENST00000445813.1;gene_id=CHM13_chrY_G0000618;gene_biotype=unprocessed_pseudogene;gene_name=CDY13P;gene_sources=liftoff;ID=CHM13_chrY_G0000618;Name=CDY13P
CHM13_chrY	CAT	transcript	23356331	23357345	1000	-	.	source_transcript=ENST00000445813.1;source_transcript_name=CDY13P-201;source_gene=ENSG00000224873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445813.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY13P;alternative_source_transcripts=ENST00000445813.1;transcript_id=CHM13_chrY_T0001779;gene_id=CHM13_chrY_G0000618;Parent=CHM13_chrY_G0000618;transcript_name=CHM13_chrY_T0001779;gene_name=CDY13P;ID=CHM13_chrY_T0001779;Name=CDY13P
CHM13_chrY	CAT	exon	23356331	23357345	.	-	.	source_transcript=ENST00000445813.1;source_transcript_name=CDY13P-201;source_gene=ENSG00000224873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445813.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY13P;alternative_source_transcripts=ENST00000445813.1;transcript_id=CHM13_chrY_T0001779;gene_id=CHM13_chrY_G0000618;Parent=CHM13_chrY_T0001779;transcript_name=CHM13_chrY_T0001779;gene_name=CDY13P;ID=exon:CHM13_chrY_T0001779:0;Name=CDY13P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23363930	23372288	.	+	.	source_gene_common_name=USP9YP24;source_gene=ENSG00000230814.1;alternative_source_transcripts=ENST00000434374.1;gene_id=CHM13_chrY_G0000619;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP24;gene_sources=liftoff;ID=CHM13_chrY_G0000619;Name=USP9YP24
CHM13_chrY	CAT	transcript	23363930	23372288	1000	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=CHM13_chrY_T0001780;gene_id=CHM13_chrY_G0000619;Parent=CHM13_chrY_G0000619;transcript_name=CHM13_chrY_T0001780;gene_name=USP9YP24;ID=CHM13_chrY_T0001780;Name=USP9YP24
CHM13_chrY	CAT	exon	23363930	23364150	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=CHM13_chrY_T0001780;gene_id=CHM13_chrY_G0000619;Parent=CHM13_chrY_T0001780;transcript_name=CHM13_chrY_T0001780;gene_name=USP9YP24;ID=exon:CHM13_chrY_T0001780:0;Name=USP9YP24;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23364151	23365952	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=CHM13_chrY_T0001780;gene_id=CHM13_chrY_G0000619;Parent=CHM13_chrY_T0001780;transcript_name=CHM13_chrY_T0001780;gene_name=USP9YP24;ID=intron:CHM13_chrY_T0001780:0;Name=USP9YP24;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23365953	23366071	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=CHM13_chrY_T0001780;gene_id=CHM13_chrY_G0000619;Parent=CHM13_chrY_T0001780;transcript_name=CHM13_chrY_T0001780;gene_name=USP9YP24;ID=exon:CHM13_chrY_T0001780:1;Name=USP9YP24;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23366072	23367857	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=CHM13_chrY_T0001780;gene_id=CHM13_chrY_G0000619;Parent=CHM13_chrY_T0001780;transcript_name=CHM13_chrY_T0001780;gene_name=USP9YP24;ID=intron:CHM13_chrY_T0001780:1;Name=USP9YP24;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23367858	23368046	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=CHM13_chrY_T0001780;gene_id=CHM13_chrY_G0000619;Parent=CHM13_chrY_T0001780;transcript_name=CHM13_chrY_T0001780;gene_name=USP9YP24;ID=exon:CHM13_chrY_T0001780:2;Name=USP9YP24;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23368047	23370404	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=CHM13_chrY_T0001780;gene_id=CHM13_chrY_G0000619;Parent=CHM13_chrY_T0001780;transcript_name=CHM13_chrY_T0001780;gene_name=USP9YP24;ID=intron:CHM13_chrY_T0001780:2;Name=USP9YP24;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23370405	23370533	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=CHM13_chrY_T0001780;gene_id=CHM13_chrY_G0000619;Parent=CHM13_chrY_T0001780;transcript_name=CHM13_chrY_T0001780;gene_name=USP9YP24;ID=exon:CHM13_chrY_T0001780:3;Name=USP9YP24;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23370534	23372249	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=CHM13_chrY_T0001780;gene_id=CHM13_chrY_G0000619;Parent=CHM13_chrY_T0001780;transcript_name=CHM13_chrY_T0001780;gene_name=USP9YP24;ID=intron:CHM13_chrY_T0001780:3;Name=USP9YP24;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23372250	23372288	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=CHM13_chrY_T0001780;gene_id=CHM13_chrY_G0000619;Parent=CHM13_chrY_T0001780;transcript_name=CHM13_chrY_T0001780;gene_name=USP9YP24;ID=exon:CHM13_chrY_T0001780:4;Name=USP9YP24;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23372568	23420914	.	+	.	source_gene_common_name=ENSG00000300637;source_gene=ENSG00000300637.1;gene_id=CHM13_chrY_G0000620;gene_biotype=lncRNA;gene_name=ENSG00000300637;gene_sources=liftoff;ID=CHM13_chrY_G0000620;Name=ENSG00000300637
CHM13_chrY	CAT	transcript	23372568	23413415	1000	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001781;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_G0000620;transcript_name=CHM13_chrY_T0001781;gene_name=ENSG00000300637;ID=CHM13_chrY_T0001781;Name=ENSG00000300637
CHM13_chrY	CAT	exon	23372568	23372889	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001781;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_T0001781;transcript_name=CHM13_chrY_T0001781;gene_name=ENSG00000300637;ID=exon:CHM13_chrY_T0001781:0;Name=ENSG00000300637;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23372890	23377454	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001781;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_T0001781;transcript_name=CHM13_chrY_T0001781;gene_name=ENSG00000300637;ID=intron:CHM13_chrY_T0001781:0;Name=ENSG00000300637;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23377455	23377616	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001781;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_T0001781;transcript_name=CHM13_chrY_T0001781;gene_name=ENSG00000300637;ID=exon:CHM13_chrY_T0001781:1;Name=ENSG00000300637;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23377617	23412786	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001781;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_T0001781;transcript_name=CHM13_chrY_T0001781;gene_name=ENSG00000300637;ID=intron:CHM13_chrY_T0001781:1;Name=ENSG00000300637;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23412787	23413415	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001781;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_T0001781;transcript_name=CHM13_chrY_T0001781;gene_name=ENSG00000300637;ID=exon:CHM13_chrY_T0001781:2;Name=ENSG00000300637;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23372628	23420914	1000	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001782;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_G0000620;transcript_name=CHM13_chrY_T0001782;gene_name=ENSG00000300637;ID=CHM13_chrY_T0001782;Name=ENSG00000300637
CHM13_chrY	CAT	exon	23372628	23372889	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001782;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_T0001782;transcript_name=CHM13_chrY_T0001782;gene_name=ENSG00000300637;ID=exon:CHM13_chrY_T0001782:0;Name=ENSG00000300637;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23372890	23377454	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001782;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_T0001782;transcript_name=CHM13_chrY_T0001782;gene_name=ENSG00000300637;ID=intron:CHM13_chrY_T0001782:0;Name=ENSG00000300637;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23377455	23377616	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001782;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_T0001782;transcript_name=CHM13_chrY_T0001782;gene_name=ENSG00000300637;ID=exon:CHM13_chrY_T0001782:1;Name=ENSG00000300637;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23377617	23412786	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001782;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_T0001782;transcript_name=CHM13_chrY_T0001782;gene_name=ENSG00000300637;ID=intron:CHM13_chrY_T0001782:1;Name=ENSG00000300637;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23412787	23413089	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001782;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_T0001782;transcript_name=CHM13_chrY_T0001782;gene_name=ENSG00000300637;ID=exon:CHM13_chrY_T0001782:2;Name=ENSG00000300637;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23413090	23420639	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001782;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_T0001782;transcript_name=CHM13_chrY_T0001782;gene_name=ENSG00000300637;ID=intron:CHM13_chrY_T0001782:2;Name=ENSG00000300637;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23420640	23420914	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=CHM13_chrY_T0001782;gene_id=CHM13_chrY_G0000620;Parent=CHM13_chrY_T0001782;transcript_name=CHM13_chrY_T0001782;gene_name=ENSG00000300637;ID=exon:CHM13_chrY_T0001782:3;Name=ENSG00000300637;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23372696	23373498	.	+	.	source_gene_common_name=HSFY7P;source_gene=ENSG00000228571.1;gene_id=CHM13_chrY_G0000621;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY7P;gene_sources=liftoff;ID=CHM13_chrY_G0000621;Name=HSFY7P
CHM13_chrY	CAT	transcript	23372696	23373498	1000	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=CHM13_chrY_T0001783;gene_id=CHM13_chrY_G0000621;Parent=CHM13_chrY_G0000621;transcript_name=CHM13_chrY_T0001783;gene_name=HSFY7P;ID=CHM13_chrY_T0001783;Name=HSFY7P
CHM13_chrY	CAT	exon	23372696	23372854	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=CHM13_chrY_T0001783;gene_id=CHM13_chrY_G0000621;Parent=CHM13_chrY_T0001783;transcript_name=CHM13_chrY_T0001783;gene_name=HSFY7P;ID=exon:CHM13_chrY_T0001783:0;Name=HSFY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23372855	23373339	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=CHM13_chrY_T0001783;gene_id=CHM13_chrY_G0000621;Parent=CHM13_chrY_T0001783;transcript_name=CHM13_chrY_T0001783;gene_name=HSFY7P;ID=intron:CHM13_chrY_T0001783:0;Name=HSFY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23373340	23373498	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=CHM13_chrY_T0001783;gene_id=CHM13_chrY_G0000621;Parent=CHM13_chrY_T0001783;transcript_name=CHM13_chrY_T0001783;gene_name=HSFY7P;ID=exon:CHM13_chrY_T0001783:1;Name=HSFY7P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23390554	23393722	.	-	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=CHM13_chrY_G0000622;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=CHM13_chrY_G0000622;Name=ENSG00000295422
CHM13_chrY	CAT	transcript	23390554	23393722	1000	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0001784;gene_id=CHM13_chrY_G0000622;Parent=CHM13_chrY_G0000622;transcript_name=CHM13_chrY_T0001784;gene_name=ENSG00000295422;ID=CHM13_chrY_T0001784;Name=ENSG00000295422
CHM13_chrY	CAT	exon	23390554	23391898	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0001784;gene_id=CHM13_chrY_G0000622;Parent=CHM13_chrY_T0001784;transcript_name=CHM13_chrY_T0001784;gene_name=ENSG00000295422;ID=exon:CHM13_chrY_T0001784:0;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23391899	23393433	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0001784;gene_id=CHM13_chrY_G0000622;Parent=CHM13_chrY_T0001784;transcript_name=CHM13_chrY_T0001784;gene_name=ENSG00000295422;ID=intron:CHM13_chrY_T0001784:0;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23393434	23393494	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0001784;gene_id=CHM13_chrY_G0000622;Parent=CHM13_chrY_T0001784;transcript_name=CHM13_chrY_T0001784;gene_name=ENSG00000295422;ID=exon:CHM13_chrY_T0001784:1;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23393495	23393611	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0001784;gene_id=CHM13_chrY_G0000622;Parent=CHM13_chrY_T0001784;transcript_name=CHM13_chrY_T0001784;gene_name=ENSG00000295422;ID=intron:CHM13_chrY_T0001784:1;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23393612	23393722	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0001784;gene_id=CHM13_chrY_G0000622;Parent=CHM13_chrY_T0001784;transcript_name=CHM13_chrY_T0001784;gene_name=ENSG00000295422;ID=exon:CHM13_chrY_T0001784:2;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23416644	23449732	.	-	.	source_gene_common_name=OFD1P9Y;source_gene=ENSG00000230476.1;alternative_source_transcripts=ENST00000417699.1;gene_id=CHM13_chrY_G0000623;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P9Y;gene_sources=liftoff;ID=CHM13_chrY_G0000623;Name=OFD1P9Y
CHM13_chrY	CAT	transcript	23416644	23449732	1000	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_G0000623;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=CHM13_chrY_T0001785;Name=OFD1P9Y
CHM13_chrY	CAT	exon	23416644	23416737	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=exon:CHM13_chrY_T0001785:0;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23416738	23417035	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=intron:CHM13_chrY_T0001785:0;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23417036	23417102	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=exon:CHM13_chrY_T0001785:1;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23417103	23418298	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=intron:CHM13_chrY_T0001785:1;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23418299	23418453	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=exon:CHM13_chrY_T0001785:2;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23418454	23425086	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=intron:CHM13_chrY_T0001785:2;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23425087	23425187	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=exon:CHM13_chrY_T0001785:3;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23425188	23444524	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=intron:CHM13_chrY_T0001785:3;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23444525	23444635	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=exon:CHM13_chrY_T0001785:4;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23444636	23445008	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=intron:CHM13_chrY_T0001785:4;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23445009	23445624	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=exon:CHM13_chrY_T0001785:5;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23445625	23447341	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=intron:CHM13_chrY_T0001785:5;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23447342	23447451	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=exon:CHM13_chrY_T0001785:6;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23447452	23447985	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=intron:CHM13_chrY_T0001785:6;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23447986	23448115	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=exon:CHM13_chrY_T0001785:7;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23448116	23449625	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=intron:CHM13_chrY_T0001785:7;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23449626	23449732	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=CHM13_chrY_T0001785;gene_id=CHM13_chrY_G0000623;Parent=CHM13_chrY_T0001785;transcript_name=CHM13_chrY_T0001785;gene_name=OFD1P9Y;ID=exon:CHM13_chrY_T0001785:8;Name=OFD1P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23471235	23476692	.	+	.	source_gene_common_name=ENSG00000299625;source_gene=ENSG00000299625.1;gene_id=CHM13_chrY_G0000624;gene_biotype=lncRNA;gene_name=ENSG00000299625;gene_sources=liftoff;ID=CHM13_chrY_G0000624;Name=ENSG00000299625
CHM13_chrY	CAT	transcript	23471235	23476686	1000	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001786;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_G0000624;transcript_name=CHM13_chrY_T0001786;gene_name=ENSG00000299625;ID=CHM13_chrY_T0001786;Name=ENSG00000299625
CHM13_chrY	CAT	exon	23471235	23471574	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001786;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_T0001786;transcript_name=CHM13_chrY_T0001786;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001786:0;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23471575	23475495	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001786;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_T0001786;transcript_name=CHM13_chrY_T0001786;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001786:0;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23475496	23475622	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001786;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_T0001786;transcript_name=CHM13_chrY_T0001786;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001786:1;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23475623	23475986	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001786;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_T0001786;transcript_name=CHM13_chrY_T0001786;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001786:1;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23475987	23476686	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001786;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_T0001786;transcript_name=CHM13_chrY_T0001786;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001786:2;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23471236	23476692	1000	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001787;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_G0000624;transcript_name=CHM13_chrY_T0001787;gene_name=ENSG00000299625;ID=CHM13_chrY_T0001787;Name=ENSG00000299625
CHM13_chrY	CAT	exon	23471236	23471574	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001787;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_T0001787;transcript_name=CHM13_chrY_T0001787;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001787:0;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23471575	23473492	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001787;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_T0001787;transcript_name=CHM13_chrY_T0001787;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001787:0;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23473493	23473626	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001787;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_T0001787;transcript_name=CHM13_chrY_T0001787;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001787:1;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23473627	23475495	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001787;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_T0001787;transcript_name=CHM13_chrY_T0001787;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001787:1;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23475496	23475622	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001787;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_T0001787;transcript_name=CHM13_chrY_T0001787;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001787:2;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23475623	23475986	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001787;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_T0001787;transcript_name=CHM13_chrY_T0001787;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001787:2;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23475987	23476692	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001787;gene_id=CHM13_chrY_G0000624;Parent=CHM13_chrY_T0001787;transcript_name=CHM13_chrY_T0001787;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001787:3;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23481695	23481991	.	-	.	source_gene_common_name=ENSG00000273589;source_gene=ENSG00000273589.1;alternative_source_transcripts=ENST00000612840.1;gene_id=CHM13_chrY_G0000625;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000273589;gene_sources=liftoff;ID=CHM13_chrY_G0000625;Name=ENSG00000273589
CHM13_chrY	CAT	transcript	23481695	23481991	1000	-	.	source_transcript=ENST00000612840.1;source_transcript_name=ENST00000612840;source_gene=ENSG00000273589.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000273589.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000612840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612840.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273589;alternative_source_transcripts=ENST00000612840.1;transcript_id=CHM13_chrY_T0001788;gene_id=CHM13_chrY_G0000625;Parent=CHM13_chrY_G0000625;transcript_name=CHM13_chrY_T0001788;gene_name=ENSG00000273589;ID=CHM13_chrY_T0001788;Name=ENSG00000273589
CHM13_chrY	CAT	exon	23481695	23481991	.	-	.	source_transcript=ENST00000612840.1;source_transcript_name=ENST00000612840;source_gene=ENSG00000273589.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000273589.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000612840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612840.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273589;alternative_source_transcripts=ENST00000612840.1;transcript_id=CHM13_chrY_T0001788;gene_id=CHM13_chrY_G0000625;Parent=CHM13_chrY_T0001788;transcript_name=CHM13_chrY_T0001788;gene_name=ENSG00000273589;ID=exon:CHM13_chrY_T0001788:0;Name=ENSG00000273589;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23482903	23491386	.	+	.	source_gene_common_name=ENSG00000290348;source_gene=ENSG00000290348.2;gene_id=CHM13_chrY_G0000626;gene_biotype=lncRNA;gene_name=ENSG00000290348;gene_sources=liftoff;ID=CHM13_chrY_G0000626;Name=ENSG00000290348
CHM13_chrY	CAT	transcript	23482903	23491386	1000	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_G0000626;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=CHM13_chrY_T0001789;Name=ENSG00000290348
CHM13_chrY	CAT	exon	23482903	23483056	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001789;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001789:0;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23483057	23483810	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001789;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=intron:CHM13_chrY_T0001789:0;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23483811	23483890	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001789;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001789:1;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23483891	23484904	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001789;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=intron:CHM13_chrY_T0001789:1;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23484905	23485017	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001789;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001789:2;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23485018	23485470	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001789;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=intron:CHM13_chrY_T0001789:2;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23485471	23485574	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001789;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001789:3;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23485575	23488282	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001789;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=intron:CHM13_chrY_T0001789:3;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23488283	23488460	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001789;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001789:4;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23488461	23490395	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001789;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=intron:CHM13_chrY_T0001789:4;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23490396	23490548	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001789;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001789:5;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23490549	23491126	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001789;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=intron:CHM13_chrY_T0001789:5;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23491127	23491386	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001789;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001789;transcript_name=CHM13_chrY_T0001789;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001789:6;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23482935	23491386	1000	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_G0000626;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=CHM13_chrY_T0001790;Name=ENSG00000290348
CHM13_chrY	CAT	exon	23482935	23483056	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001790;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001790:0;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23483057	23483707	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001790;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=intron:CHM13_chrY_T0001790:0;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23483708	23483890	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001790;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001790:1;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23483891	23484904	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001790;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=intron:CHM13_chrY_T0001790:1;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23484905	23485017	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001790;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001790:2;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23485018	23485470	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001790;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=intron:CHM13_chrY_T0001790:2;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23485471	23485574	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001790;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001790:3;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23485575	23488282	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001790;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=intron:CHM13_chrY_T0001790:3;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23488283	23488460	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001790;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001790:4;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23488461	23490395	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001790;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=intron:CHM13_chrY_T0001790:4;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23490396	23490548	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001790;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001790:5;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23490549	23491126	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001790;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=intron:CHM13_chrY_T0001790:5;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23491127	23491386	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=CHM13_chrY_T0001790;gene_id=CHM13_chrY_G0000626;Parent=CHM13_chrY_T0001790;transcript_name=CHM13_chrY_T0001790;gene_name=ENSG00000290348;ID=exon:CHM13_chrY_T0001790:6;Name=ENSG00000290348;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23484909	23494542	.	+	.	source_gene_common_name=RBMY2BP;source_gene=ENSG00000224657.10;gene_id=CHM13_chrY_G0000627;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2BP;gene_sources=liftoff;ID=CHM13_chrY_G0000627;Name=RBMY2BP
CHM13_chrY	CAT	transcript	23484909	23494542	1000	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_G0000627;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=CHM13_chrY_T0001791;Name=RBMY2BP
CHM13_chrY	CAT	exon	23484909	23485017	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=exon:CHM13_chrY_T0001791:0;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23485018	23485470	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=intron:CHM13_chrY_T0001791:0;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23485471	23485574	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=exon:CHM13_chrY_T0001791:1;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23485575	23488282	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=intron:CHM13_chrY_T0001791:1;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23488283	23488460	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=exon:CHM13_chrY_T0001791:2;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23488461	23490395	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=intron:CHM13_chrY_T0001791:2;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23490396	23490548	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=exon:CHM13_chrY_T0001791:3;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23490549	23492555	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=intron:CHM13_chrY_T0001791:3;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23492556	23492670	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=exon:CHM13_chrY_T0001791:4;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23492671	23493539	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=intron:CHM13_chrY_T0001791:4;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23493540	23493650	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=exon:CHM13_chrY_T0001791:5;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23493651	23493732	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=intron:CHM13_chrY_T0001791:5;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23493733	23493820	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=exon:CHM13_chrY_T0001791:6;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23493821	23494244	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=intron:CHM13_chrY_T0001791:6;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23494245	23494542	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=CHM13_chrY_T0001791;gene_id=CHM13_chrY_G0000627;Parent=CHM13_chrY_T0001791;transcript_name=CHM13_chrY_T0001791;gene_name=RBMY2BP;ID=exon:CHM13_chrY_T0001791:7;Name=RBMY2BP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23506288	23508531	.	-	.	source_gene_common_name=ENSG00000224917;source_gene=ENSG00000224917.1;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;gene_id=CHM13_chrY_G0000628;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000224917;gene_sources=liftoff;ID=CHM13_chrY_G0000628;Name=ENSG00000224917
CHM13_chrY	CAT	transcript	23506288	23508531	1000	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=CHM13_chrY_T0001792;gene_id=CHM13_chrY_G0000628;Parent=CHM13_chrY_G0000628;transcript_name=CHM13_chrY_T0001792;gene_name=ENSG00000224917;ID=CHM13_chrY_T0001792;Name=ENSG00000224917
CHM13_chrY	CAT	exon	23506288	23506361	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=CHM13_chrY_T0001792;gene_id=CHM13_chrY_G0000628;Parent=CHM13_chrY_T0001792;transcript_name=CHM13_chrY_T0001792;gene_name=ENSG00000224917;ID=exon:CHM13_chrY_T0001792:0;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23506362	23506482	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=CHM13_chrY_T0001792;gene_id=CHM13_chrY_G0000628;Parent=CHM13_chrY_T0001792;transcript_name=CHM13_chrY_T0001792;gene_name=ENSG00000224917;ID=intron:CHM13_chrY_T0001792:0;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23506483	23506542	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=CHM13_chrY_T0001792;gene_id=CHM13_chrY_G0000628;Parent=CHM13_chrY_T0001792;transcript_name=CHM13_chrY_T0001792;gene_name=ENSG00000224917;ID=exon:CHM13_chrY_T0001792:1;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23506543	23506718	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=CHM13_chrY_T0001792;gene_id=CHM13_chrY_G0000628;Parent=CHM13_chrY_T0001792;transcript_name=CHM13_chrY_T0001792;gene_name=ENSG00000224917;ID=intron:CHM13_chrY_T0001792:1;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23506719	23506827	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=CHM13_chrY_T0001792;gene_id=CHM13_chrY_G0000628;Parent=CHM13_chrY_T0001792;transcript_name=CHM13_chrY_T0001792;gene_name=ENSG00000224917;ID=exon:CHM13_chrY_T0001792:2;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23506828	23507042	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=CHM13_chrY_T0001792;gene_id=CHM13_chrY_G0000628;Parent=CHM13_chrY_T0001792;transcript_name=CHM13_chrY_T0001792;gene_name=ENSG00000224917;ID=intron:CHM13_chrY_T0001792:2;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23507043	23507097	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=CHM13_chrY_T0001792;gene_id=CHM13_chrY_G0000628;Parent=CHM13_chrY_T0001792;transcript_name=CHM13_chrY_T0001792;gene_name=ENSG00000224917;ID=exon:CHM13_chrY_T0001792:3;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23507098	23508129	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=CHM13_chrY_T0001792;gene_id=CHM13_chrY_G0000628;Parent=CHM13_chrY_T0001792;transcript_name=CHM13_chrY_T0001792;gene_name=ENSG00000224917;ID=intron:CHM13_chrY_T0001792:3;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23508130	23508531	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=CHM13_chrY_T0001792;gene_id=CHM13_chrY_G0000628;Parent=CHM13_chrY_T0001792;transcript_name=CHM13_chrY_T0001792;gene_name=ENSG00000224917;ID=exon:CHM13_chrY_T0001792:4;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23529604	23607816	.	-	.	source_gene_common_name=ENSG00000306918;source_gene=ENSG00000306918.1;gene_id=CHM13_chrY_G0000629;gene_biotype=lncRNA;gene_name=ENSG00000306918;gene_sources=liftoff;ID=CHM13_chrY_G0000629;Name=ENSG00000306918
CHM13_chrY	CAT	transcript	23529604	23607800	1000	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001793;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_G0000629;transcript_name=CHM13_chrY_T0001793;gene_name=ENSG00000306918;ID=CHM13_chrY_T0001793;Name=ENSG00000306918
CHM13_chrY	CAT	exon	23529604	23529886	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001793;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001793;transcript_name=CHM13_chrY_T0001793;gene_name=ENSG00000306918;ID=exon:CHM13_chrY_T0001793:0;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23529887	23531504	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001793;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001793;transcript_name=CHM13_chrY_T0001793;gene_name=ENSG00000306918;ID=intron:CHM13_chrY_T0001793:0;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23531505	23531548	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001793;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001793;transcript_name=CHM13_chrY_T0001793;gene_name=ENSG00000306918;ID=exon:CHM13_chrY_T0001793:1;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23531549	23595974	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001793;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001793;transcript_name=CHM13_chrY_T0001793;gene_name=ENSG00000306918;ID=intron:CHM13_chrY_T0001793:1;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23595975	23596082	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001793;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001793;transcript_name=CHM13_chrY_T0001793;gene_name=ENSG00000306918;ID=exon:CHM13_chrY_T0001793:2;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23596083	23599230	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001793;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001793;transcript_name=CHM13_chrY_T0001793;gene_name=ENSG00000306918;ID=intron:CHM13_chrY_T0001793:2;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23599231	23599319	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001793;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001793;transcript_name=CHM13_chrY_T0001793;gene_name=ENSG00000306918;ID=exon:CHM13_chrY_T0001793:3;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23599320	23607701	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001793;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001793;transcript_name=CHM13_chrY_T0001793;gene_name=ENSG00000306918;ID=intron:CHM13_chrY_T0001793:3;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23607702	23607800	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001793;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001793;transcript_name=CHM13_chrY_T0001793;gene_name=ENSG00000306918;ID=exon:CHM13_chrY_T0001793:4;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23564790	23607798	1000	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001794;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_G0000629;transcript_name=CHM13_chrY_T0001794;gene_name=ENSG00000306918;ID=CHM13_chrY_T0001794;Name=ENSG00000306918
CHM13_chrY	CAT	exon	23564790	23565186	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001794;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001794;transcript_name=CHM13_chrY_T0001794;gene_name=ENSG00000306918;ID=exon:CHM13_chrY_T0001794:0;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23565187	23595974	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001794;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001794;transcript_name=CHM13_chrY_T0001794;gene_name=ENSG00000306918;ID=intron:CHM13_chrY_T0001794:0;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23595975	23596082	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001794;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001794;transcript_name=CHM13_chrY_T0001794;gene_name=ENSG00000306918;ID=exon:CHM13_chrY_T0001794:1;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23596083	23599230	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001794;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001794;transcript_name=CHM13_chrY_T0001794;gene_name=ENSG00000306918;ID=intron:CHM13_chrY_T0001794:1;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23599231	23599319	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001794;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001794;transcript_name=CHM13_chrY_T0001794;gene_name=ENSG00000306918;ID=exon:CHM13_chrY_T0001794:2;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23599320	23607701	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001794;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001794;transcript_name=CHM13_chrY_T0001794;gene_name=ENSG00000306918;ID=intron:CHM13_chrY_T0001794:2;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23607702	23607798	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001794;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001794;transcript_name=CHM13_chrY_T0001794;gene_name=ENSG00000306918;ID=exon:CHM13_chrY_T0001794:3;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23564790	23607816	1000	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001795;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_G0000629;transcript_name=CHM13_chrY_T0001795;gene_name=ENSG00000306918;ID=CHM13_chrY_T0001795;Name=ENSG00000306918
CHM13_chrY	CAT	exon	23564790	23565186	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001795;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001795;transcript_name=CHM13_chrY_T0001795;gene_name=ENSG00000306918;ID=exon:CHM13_chrY_T0001795:0;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23565187	23595974	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001795;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001795;transcript_name=CHM13_chrY_T0001795;gene_name=ENSG00000306918;ID=intron:CHM13_chrY_T0001795:0;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23595975	23596082	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001795;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001795;transcript_name=CHM13_chrY_T0001795;gene_name=ENSG00000306918;ID=exon:CHM13_chrY_T0001795:1;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23596083	23607701	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001795;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001795;transcript_name=CHM13_chrY_T0001795;gene_name=ENSG00000306918;ID=intron:CHM13_chrY_T0001795:1;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23607702	23607816	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=CHM13_chrY_T0001795;gene_id=CHM13_chrY_G0000629;Parent=CHM13_chrY_T0001795;transcript_name=CHM13_chrY_T0001795;gene_name=ENSG00000306918;ID=exon:CHM13_chrY_T0001795:2;Name=ENSG00000306918;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23598516	23605460	.	-	.	source_gene_common_name=RBMY2WP;source_gene=ENSG00000230727.1;gene_id=CHM13_chrY_G0000630;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2WP;gene_sources=liftoff;ID=CHM13_chrY_G0000630;Name=RBMY2WP
CHM13_chrY	CAT	transcript	23598516	23605460	1000	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=CHM13_chrY_T0001796;gene_id=CHM13_chrY_G0000630;Parent=CHM13_chrY_G0000630;transcript_name=CHM13_chrY_T0001796;gene_name=RBMY2WP;ID=CHM13_chrY_T0001796;Name=RBMY2WP
CHM13_chrY	CAT	exon	23598516	23598817	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=CHM13_chrY_T0001796;gene_id=CHM13_chrY_G0000630;Parent=CHM13_chrY_T0001796;transcript_name=CHM13_chrY_T0001796;gene_name=RBMY2WP;ID=exon:CHM13_chrY_T0001796:0;Name=RBMY2WP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23598818	23599230	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=CHM13_chrY_T0001796;gene_id=CHM13_chrY_G0000630;Parent=CHM13_chrY_T0001796;transcript_name=CHM13_chrY_T0001796;gene_name=RBMY2WP;ID=intron:CHM13_chrY_T0001796:0;Name=RBMY2WP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23599231	23599319	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=CHM13_chrY_T0001796;gene_id=CHM13_chrY_G0000630;Parent=CHM13_chrY_T0001796;transcript_name=CHM13_chrY_T0001796;gene_name=RBMY2WP;ID=exon:CHM13_chrY_T0001796:1;Name=RBMY2WP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23599320	23599400	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=CHM13_chrY_T0001796;gene_id=CHM13_chrY_G0000630;Parent=CHM13_chrY_T0001796;transcript_name=CHM13_chrY_T0001796;gene_name=RBMY2WP;ID=intron:CHM13_chrY_T0001796:1;Name=RBMY2WP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23599401	23599511	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=CHM13_chrY_T0001796;gene_id=CHM13_chrY_G0000630;Parent=CHM13_chrY_T0001796;transcript_name=CHM13_chrY_T0001796;gene_name=RBMY2WP;ID=exon:CHM13_chrY_T0001796:2;Name=RBMY2WP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23599512	23602266	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=CHM13_chrY_T0001796;gene_id=CHM13_chrY_G0000630;Parent=CHM13_chrY_T0001796;transcript_name=CHM13_chrY_T0001796;gene_name=RBMY2WP;ID=intron:CHM13_chrY_T0001796:2;Name=RBMY2WP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23602267	23602443	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=CHM13_chrY_T0001796;gene_id=CHM13_chrY_G0000630;Parent=CHM13_chrY_T0001796;transcript_name=CHM13_chrY_T0001796;gene_name=RBMY2WP;ID=exon:CHM13_chrY_T0001796:3;Name=RBMY2WP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23602444	23604831	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=CHM13_chrY_T0001796;gene_id=CHM13_chrY_G0000630;Parent=CHM13_chrY_T0001796;transcript_name=CHM13_chrY_T0001796;gene_name=RBMY2WP;ID=intron:CHM13_chrY_T0001796:3;Name=RBMY2WP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23604832	23604933	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=CHM13_chrY_T0001796;gene_id=CHM13_chrY_G0000630;Parent=CHM13_chrY_T0001796;transcript_name=CHM13_chrY_T0001796;gene_name=RBMY2WP;ID=exon:CHM13_chrY_T0001796:4;Name=RBMY2WP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23604934	23605347	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=CHM13_chrY_T0001796;gene_id=CHM13_chrY_G0000630;Parent=CHM13_chrY_T0001796;transcript_name=CHM13_chrY_T0001796;gene_name=RBMY2WP;ID=intron:CHM13_chrY_T0001796:4;Name=RBMY2WP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23605348	23605460	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=CHM13_chrY_T0001796;gene_id=CHM13_chrY_G0000630;Parent=CHM13_chrY_T0001796;transcript_name=CHM13_chrY_T0001796;gene_name=RBMY2WP;ID=exon:CHM13_chrY_T0001796:5;Name=RBMY2WP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23652789	23657879	.	-	.	source_gene_common_name=ENSG00000308317;source_gene=ENSG00000308317.1;gene_id=CHM13_chrY_G0000631;gene_biotype=lncRNA;gene_name=ENSG00000308317;gene_sources=liftoff;ID=CHM13_chrY_G0000631;Name=ENSG00000308317
CHM13_chrY	CAT	transcript	23652789	23657879	1000	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=CHM13_chrY_T0001797;gene_id=CHM13_chrY_G0000631;Parent=CHM13_chrY_G0000631;transcript_name=CHM13_chrY_T0001797;gene_name=ENSG00000308317;ID=CHM13_chrY_T0001797;Name=ENSG00000308317
CHM13_chrY	CAT	exon	23652789	23653130	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=CHM13_chrY_T0001797;gene_id=CHM13_chrY_G0000631;Parent=CHM13_chrY_T0001797;transcript_name=CHM13_chrY_T0001797;gene_name=ENSG00000308317;ID=exon:CHM13_chrY_T0001797:0;Name=ENSG00000308317;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23653131	23657782	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=CHM13_chrY_T0001797;gene_id=CHM13_chrY_G0000631;Parent=CHM13_chrY_T0001797;transcript_name=CHM13_chrY_T0001797;gene_name=ENSG00000308317;ID=intron:CHM13_chrY_T0001797:0;Name=ENSG00000308317;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23657783	23657879	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=CHM13_chrY_T0001797;gene_id=CHM13_chrY_G0000631;Parent=CHM13_chrY_T0001797;transcript_name=CHM13_chrY_T0001797;gene_name=ENSG00000308317;ID=exon:CHM13_chrY_T0001797:1;Name=ENSG00000308317;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23687270	23688401	.	+	.	source_gene_common_name=TTTY17A;source_gene=ENSG00000228240.1;gene_id=CHM13_chrY_G0000632;gene_biotype=lncRNA;gene_name=TTTY17A;gene_sources=liftoff;ID=CHM13_chrY_G0000632;Name=TTTY17A
CHM13_chrY	CAT	transcript	23687270	23688401	1000	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;transcript_id=CHM13_chrY_T0001798;gene_id=CHM13_chrY_G0000632;Parent=CHM13_chrY_G0000632;transcript_name=CHM13_chrY_T0001798;gene_name=TTTY17A;ID=CHM13_chrY_T0001798;Name=TTTY17A
CHM13_chrY	CAT	exon	23687270	23687329	.	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;transcript_id=CHM13_chrY_T0001798;gene_id=CHM13_chrY_G0000632;Parent=CHM13_chrY_T0001798;transcript_name=CHM13_chrY_T0001798;gene_name=TTTY17A;ID=exon:CHM13_chrY_T0001798:0;Name=TTTY17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23687330	23688295	.	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;transcript_id=CHM13_chrY_T0001798;gene_id=CHM13_chrY_G0000632;Parent=CHM13_chrY_T0001798;transcript_name=CHM13_chrY_T0001798;gene_name=TTTY17A;ID=intron:CHM13_chrY_T0001798:0;Name=TTTY17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23688296	23688401	.	+	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;transcript_id=CHM13_chrY_T0001798;gene_id=CHM13_chrY_G0000632;Parent=CHM13_chrY_T0001798;transcript_name=CHM13_chrY_T0001798;gene_name=TTTY17A;ID=exon:CHM13_chrY_T0001798:1;Name=TTTY17A;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23696647	23697521	.	-	.	source_gene_common_name=TRIM60P5Y;source_gene=ENSG00000224210.1;gene_id=CHM13_chrY_G0000633;gene_biotype=processed_pseudogene;gene_name=TRIM60P5Y;gene_sources=liftoff;ID=CHM13_chrY_G0000633;Name=TRIM60P5Y
CHM13_chrY	CAT	transcript	23696647	23697521	1000	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=CHM13_chrY_T0001799;gene_id=CHM13_chrY_G0000633;Parent=CHM13_chrY_G0000633;transcript_name=CHM13_chrY_T0001799;gene_name=TRIM60P5Y;ID=CHM13_chrY_T0001799;Name=TRIM60P5Y
CHM13_chrY	CAT	exon	23696647	23696944	.	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=CHM13_chrY_T0001799;gene_id=CHM13_chrY_G0000633;Parent=CHM13_chrY_T0001799;transcript_name=CHM13_chrY_T0001799;gene_name=TRIM60P5Y;ID=exon:CHM13_chrY_T0001799:0;Name=TRIM60P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23696945	23697245	.	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=CHM13_chrY_T0001799;gene_id=CHM13_chrY_G0000633;Parent=CHM13_chrY_T0001799;transcript_name=CHM13_chrY_T0001799;gene_name=TRIM60P5Y;ID=intron:CHM13_chrY_T0001799:0;Name=TRIM60P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23697246	23697521	.	-	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=CHM13_chrY_T0001799;gene_id=CHM13_chrY_G0000633;Parent=CHM13_chrY_T0001799;transcript_name=CHM13_chrY_T0001799;gene_name=TRIM60P5Y;ID=exon:CHM13_chrY_T0001799:1;Name=TRIM60P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23702230	23703442	.	-	.	source_gene_common_name=ZNF736P11Y;source_gene=ENSG00000215537.3;alternative_source_transcripts=ENST00000442535.1,ENST00000442535.1;gene_id=CHM13_chrY_G0000634;gene_biotype=processed_pseudogene;gene_name=ZNF736P11Y;gene_sources=liftoff;ID=CHM13_chrY_G0000634;Name=ZNF736P11Y
CHM13_chrY	CAT	transcript	23702230	23703442	1000	-	.	source_transcript=ENST00000442535.1;source_transcript_name=ZNF736P11Y-201;source_gene=ENSG00000215537.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215537.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442535.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442535.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P11Y;alternative_source_transcripts=ENST00000442535.1,ENST00000442535.1;transcript_id=CHM13_chrY_T0001800;gene_id=CHM13_chrY_G0000634;Parent=CHM13_chrY_G0000634;transcript_name=CHM13_chrY_T0001800;gene_name=ZNF736P11Y;ID=CHM13_chrY_T0001800;Name=ZNF736P11Y
CHM13_chrY	CAT	exon	23702230	23703442	.	-	.	source_transcript=ENST00000442535.1;source_transcript_name=ZNF736P11Y-201;source_gene=ENSG00000215537.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215537.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442535.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442535.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P11Y;alternative_source_transcripts=ENST00000442535.1,ENST00000442535.1;transcript_id=CHM13_chrY_T0001800;gene_id=CHM13_chrY_G0000634;Parent=CHM13_chrY_T0001800;transcript_name=CHM13_chrY_T0001800;gene_name=ZNF736P11Y;ID=exon:CHM13_chrY_T0001800:0;Name=ZNF736P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23772150	23808960	.	+	.	source_gene_common_name=TTTY4;source_gene=ENSG00000226906.1;alternative_source_transcripts=ENST00000436568.1;gene_id=CHM13_chrY_G0000635;gene_biotype=lncRNA;gene_name=TTTY4;gene_sources=liftoff;ID=CHM13_chrY_G0000635;Name=TTTY4
CHM13_chrY	CAT	transcript	23772150	23808960	1000	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=CHM13_chrY_T0001801;gene_id=CHM13_chrY_G0000635;Parent=CHM13_chrY_G0000635;transcript_name=CHM13_chrY_T0001801;gene_name=TTTY4;ID=CHM13_chrY_T0001801;Name=TTTY4
CHM13_chrY	CAT	exon	23772150	23772310	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=CHM13_chrY_T0001801;gene_id=CHM13_chrY_G0000635;Parent=CHM13_chrY_T0001801;transcript_name=CHM13_chrY_T0001801;gene_name=TTTY4;ID=exon:CHM13_chrY_T0001801:0;Name=TTTY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23772311	23799321	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=CHM13_chrY_T0001801;gene_id=CHM13_chrY_G0000635;Parent=CHM13_chrY_T0001801;transcript_name=CHM13_chrY_T0001801;gene_name=TTTY4;ID=intron:CHM13_chrY_T0001801:0;Name=TTTY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23799322	23799397	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=CHM13_chrY_T0001801;gene_id=CHM13_chrY_G0000635;Parent=CHM13_chrY_T0001801;transcript_name=CHM13_chrY_T0001801;gene_name=TTTY4;ID=exon:CHM13_chrY_T0001801:1;Name=TTTY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23799398	23801201	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=CHM13_chrY_T0001801;gene_id=CHM13_chrY_G0000635;Parent=CHM13_chrY_T0001801;transcript_name=CHM13_chrY_T0001801;gene_name=TTTY4;ID=intron:CHM13_chrY_T0001801:1;Name=TTTY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23801202	23801309	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=CHM13_chrY_T0001801;gene_id=CHM13_chrY_G0000635;Parent=CHM13_chrY_T0001801;transcript_name=CHM13_chrY_T0001801;gene_name=TTTY4;ID=exon:CHM13_chrY_T0001801:2;Name=TTTY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23801310	23807959	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=CHM13_chrY_T0001801;gene_id=CHM13_chrY_G0000635;Parent=CHM13_chrY_T0001801;transcript_name=CHM13_chrY_T0001801;gene_name=TTTY4;ID=intron:CHM13_chrY_T0001801:2;Name=TTTY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23807960	23808960	.	+	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000436568.1;transcript_id=CHM13_chrY_T0001801;gene_id=CHM13_chrY_G0000635;Parent=CHM13_chrY_T0001801;transcript_name=CHM13_chrY_T0001801;gene_name=TTTY4;ID=exon:CHM13_chrY_T0001801:3;Name=TTTY4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23809495	23841142	.	+	.	source_gene_common_name=BPY2C;source_gene=ENSG00000185894.8;gene_id=CHM13_chrY_G0000636;gene_biotype=protein_coding;gene_name=BPY2C;gene_sources=liftoff;ID=CHM13_chrY_G0000636;Name=BPY2C
CHM13_chrY	CAT	transcript	23809495	23828052	10000	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001802;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_G0000636;transcript_name=CHM13_chrY_T0001802;gene_name=BPY2C;ID=CHM13_chrY_T0001802;Name=BPY2C
CHM13_chrY	CAT	exon	23809495	23809650	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001802;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001802;transcript_name=CHM13_chrY_T0001802;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001802:0;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23809651	23819823	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001802;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001802;transcript_name=CHM13_chrY_T0001802;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001802:0;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23819824	23819892	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001802;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001802;transcript_name=CHM13_chrY_T0001802;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001802:1;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23819893	23820244	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001802;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001802;transcript_name=CHM13_chrY_T0001802;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001802:1;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23820245	23820367	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001802;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001802;transcript_name=CHM13_chrY_T0001802;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001802:2;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23820368	23823432	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001802;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001802;transcript_name=CHM13_chrY_T0001802;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001802:2;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23823433	23823569	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001802;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001802;transcript_name=CHM13_chrY_T0001802;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001802:3;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23823570	23827978	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001802;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001802;transcript_name=CHM13_chrY_T0001802;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001802:3;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23827979	23828052	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001802;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001802;transcript_name=CHM13_chrY_T0001802;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001802:4;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23828020	23828052	.	+	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001802;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001802;transcript_name=CHM13_chrY_T0001802;gene_name=BPY2C;ID=CDS:CHM13_chrY_T0001802:0;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	23828020	23828022	.	+	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001802;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001802;transcript_name=CHM13_chrY_T0001802;gene_name=BPY2C;ID=start_codon:CHM13_chrY_T0001802;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	23828050	23828052	.	+	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001802;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001802;transcript_name=CHM13_chrY_T0001802;gene_name=BPY2C;ID=stop_codon:CHM13_chrY_T0001802;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23819939	23841142	10000	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_G0000636;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=CHM13_chrY_T0001803;Name=BPY2C
CHM13_chrY	CAT	exon	23819939	23819969	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001803:0;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23819970	23820244	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001803:0;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23820245	23820367	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001803:1;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23820368	23823432	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001803:1;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23823433	23823569	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001803:2;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23823570	23827978	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001803:2;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23827979	23828097	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001803:3;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23828020	23828097	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=CDS:CHM13_chrY_T0001803:0;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	23828020	23828022	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=start_codon:CHM13_chrY_T0001803;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23828098	23830156	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001803:3;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23830157	23830274	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001803:4;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23830157	23830274	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=CDS:CHM13_chrY_T0001803:1;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23830275	23833128	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001803:4;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23833129	23833234	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001803:5;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23833129	23833234	.	+	2	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=CDS:CHM13_chrY_T0001803:2;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23833235	23833926	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001803:5;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23833927	23834051	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001803:6;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23833927	23833945	.	+	1	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=CDS:CHM13_chrY_T0001803:3;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	23833943	23833945	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=stop_codon:CHM13_chrY_T0001803;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23834052	23840601	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001803:6;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23840602	23840726	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001803:7;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23840727	23840820	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001803:7;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23840821	23841142	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001803;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001803;transcript_name=CHM13_chrY_T0001803;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001803:8;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23819963	23841083	1000	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_G0000636;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=CHM13_chrY_T0001804;Name=BPY2C
CHM13_chrY	CAT	exon	23819963	23819969	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001804:0;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23819970	23820244	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001804:0;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23820245	23820367	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001804:1;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23820368	23823432	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001804:1;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23823433	23823569	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001804:2;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23823570	23827978	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001804:2;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23827979	23828097	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001804:3;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23828098	23833128	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001804:3;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23833129	23833234	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001804:4;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23833235	23833926	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001804:4;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23833927	23834051	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001804:5;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23834052	23840601	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001804:5;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23840602	23840731	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001804:6;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23840732	23840820	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001804:6;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23840821	23841083	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001804;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001804;transcript_name=CHM13_chrY_T0001804;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001804:7;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23828020	23833945	10000	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_G0000636;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=CHM13_chrY_T0001805;Name=BPY2C
CHM13_chrY	CAT	exon	23828020	23828097	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001805;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001805:0;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23828020	23828097	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001805;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=CDS:CHM13_chrY_T0001805:0;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	23828020	23828022	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001805;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=start_codon:CHM13_chrY_T0001805;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23828098	23830156	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001805;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001805:0;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23830157	23830274	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001805;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001805:1;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23830157	23830274	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001805;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=CDS:CHM13_chrY_T0001805:1;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23830275	23833128	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001805;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001805:1;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23833129	23833234	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001805;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001805:2;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23833129	23833234	.	+	2	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001805;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=CDS:CHM13_chrY_T0001805:2;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23833235	23833926	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001805;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=intron:CHM13_chrY_T0001805:2;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23833927	23833945	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001805;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=exon:CHM13_chrY_T0001805:3;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23833927	23833945	.	+	1	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001805;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=CDS:CHM13_chrY_T0001805:3;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	23833943	23833945	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=CHM13_chrY_T0001805;gene_id=CHM13_chrY_G0000636;Parent=CHM13_chrY_T0001805;transcript_name=CHM13_chrY_T0001805;gene_name=BPY2C;ID=stop_codon:CHM13_chrY_T0001805;Name=BPY2C;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23852743	23853469	.	+	.	source_gene_common_name=ENSG00000240566;source_gene=ENSG00000240566.1;gene_id=CHM13_chrY_G0000637;gene_biotype=processed_pseudogene;gene_name=ENSG00000240566;gene_sources=liftoff;ID=CHM13_chrY_G0000637;Name=ENSG00000240566
CHM13_chrY	CAT	transcript	23852743	23853469	1000	+	.	source_transcript=ENST00000432862.1;source_transcript_name=ENST00000432862;source_gene=ENSG00000240566.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000240566.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432862.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432862.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000240566;transcript_id=CHM13_chrY_T0001806;gene_id=CHM13_chrY_G0000637;Parent=CHM13_chrY_G0000637;transcript_name=CHM13_chrY_T0001806;gene_name=ENSG00000240566;ID=CHM13_chrY_T0001806;Name=ENSG00000240566
CHM13_chrY	CAT	exon	23852743	23853469	.	+	.	source_transcript=ENST00000432862.1;source_transcript_name=ENST00000432862;source_gene=ENSG00000240566.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000240566.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432862.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432862.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000240566;transcript_id=CHM13_chrY_T0001806;gene_id=CHM13_chrY_G0000637;Parent=CHM13_chrY_T0001806;transcript_name=CHM13_chrY_T0001806;gene_name=ENSG00000240566;ID=exon:CHM13_chrY_T0001806:0;Name=ENSG00000240566;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23861275	23862344	.	+	.	source_gene_common_name=TRIM60P10Y;source_gene=ENSG00000232976.1;gene_id=CHM13_chrY_G0000638;gene_biotype=processed_pseudogene;gene_name=TRIM60P10Y;gene_sources=liftoff;ID=CHM13_chrY_G0000638;Name=TRIM60P10Y
CHM13_chrY	CAT	transcript	23861275	23862344	1000	+	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=CHM13_chrY_T0001807;gene_id=CHM13_chrY_G0000638;Parent=CHM13_chrY_G0000638;transcript_name=CHM13_chrY_T0001807;gene_name=TRIM60P10Y;ID=CHM13_chrY_T0001807;Name=TRIM60P10Y
CHM13_chrY	CAT	exon	23861275	23861505	.	+	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=CHM13_chrY_T0001807;gene_id=CHM13_chrY_G0000638;Parent=CHM13_chrY_T0001807;transcript_name=CHM13_chrY_T0001807;gene_name=TRIM60P10Y;ID=exon:CHM13_chrY_T0001807:0;Name=TRIM60P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23861506	23861824	.	+	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=CHM13_chrY_T0001807;gene_id=CHM13_chrY_G0000638;Parent=CHM13_chrY_T0001807;transcript_name=CHM13_chrY_T0001807;gene_name=TRIM60P10Y;ID=intron:CHM13_chrY_T0001807:0;Name=TRIM60P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23861825	23862344	.	+	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=CHM13_chrY_T0001807;gene_id=CHM13_chrY_G0000638;Parent=CHM13_chrY_T0001807;transcript_name=CHM13_chrY_T0001807;gene_name=TRIM60P10Y;ID=exon:CHM13_chrY_T0001807:1;Name=TRIM60P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23885599	23886877	.	+	.	source_gene_common_name=ZNF736P2Y;source_gene=ENSG00000226270.3;gene_id=CHM13_chrY_G0000639;gene_biotype=processed_pseudogene;gene_name=ZNF736P2Y;gene_sources=liftoff;ID=CHM13_chrY_G0000639;Name=ZNF736P2Y
CHM13_chrY	CAT	transcript	23885599	23886877	1000	+	.	source_transcript=ENST00000416040.1;source_transcript_name=ZNF736P2Y-201;source_gene=ENSG00000226270.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226270.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416040.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P2Y;transcript_id=CHM13_chrY_T0001808;gene_id=CHM13_chrY_G0000639;Parent=CHM13_chrY_G0000639;transcript_name=CHM13_chrY_T0001808;gene_name=ZNF736P2Y;ID=CHM13_chrY_T0001808;Name=ZNF736P2Y
CHM13_chrY	CAT	exon	23885599	23886877	.	+	.	source_transcript=ENST00000416040.1;source_transcript_name=ZNF736P2Y-201;source_gene=ENSG00000226270.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226270.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P2Y;transcript_id=CHM13_chrY_T0001808;gene_id=CHM13_chrY_G0000639;Parent=CHM13_chrY_T0001808;transcript_name=CHM13_chrY_T0001808;gene_name=ZNF736P2Y;ID=exon:CHM13_chrY_T0001808:0;Name=ZNF736P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23893728	23894873	.	+	.	source_gene_common_name=TRIM60P11Y;source_gene=ENSG00000227837.1;gene_id=CHM13_chrY_G0000640;gene_biotype=processed_pseudogene;gene_name=TRIM60P11Y;gene_sources=liftoff;ID=CHM13_chrY_G0000640;Name=TRIM60P11Y
CHM13_chrY	CAT	transcript	23893728	23894873	1000	+	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=CHM13_chrY_T0001809;gene_id=CHM13_chrY_G0000640;Parent=CHM13_chrY_G0000640;transcript_name=CHM13_chrY_T0001809;gene_name=TRIM60P11Y;ID=CHM13_chrY_T0001809;Name=TRIM60P11Y
CHM13_chrY	CAT	exon	23893728	23894016	.	+	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=CHM13_chrY_T0001809;gene_id=CHM13_chrY_G0000640;Parent=CHM13_chrY_T0001809;transcript_name=CHM13_chrY_T0001809;gene_name=TRIM60P11Y;ID=exon:CHM13_chrY_T0001809:0;Name=TRIM60P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23894017	23894357	.	+	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=CHM13_chrY_T0001809;gene_id=CHM13_chrY_G0000640;Parent=CHM13_chrY_T0001809;transcript_name=CHM13_chrY_T0001809;gene_name=TRIM60P11Y;ID=intron:CHM13_chrY_T0001809:0;Name=TRIM60P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23894358	23894873	.	+	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=CHM13_chrY_T0001809;gene_id=CHM13_chrY_G0000640;Parent=CHM13_chrY_T0001809;transcript_name=CHM13_chrY_T0001809;gene_name=TRIM60P11Y;ID=exon:CHM13_chrY_T0001809:1;Name=TRIM60P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	23965003	24026301	.	-	.	source_gene_common_name=DAZ3;source_gene=ENSG00000187191.16;gene_id=CHM13_chrY_G0000641;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=liftoff;ID=CHM13_chrY_G0000641;Name=DAZ3
CHM13_chrY	CAT	transcript	23965003	24026301	9980	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_G0000641;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CHM13_chrY_T0001810;Name=DAZ3
CHM13_chrY	CAT	exon	23965003	23966859	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:0;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23966860	23970832	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:0;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23970833	23970931	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:1;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23970868	23970931	.	-	1	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:0;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	23970868	23970870	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=stop_codon:CHM13_chrY_T0001810;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23970932	23975503	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:1;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23975504	23975538	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:2;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23975504	23975538	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:1;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23975539	23976283	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:2;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23976284	23976355	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:3;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23976284	23976355	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:2;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23976356	23990827	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:3;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23990828	23990899	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:4;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23990828	23990899	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:3;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23990900	23993204	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:4;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23993205	23993276	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:5;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23993205	23993276	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:4;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23993277	23995600	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:5;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23995601	23995672	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:6;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23995601	23995672	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:5;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23995673	23997984	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:6;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23997985	23998056	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:7;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23997985	23998056	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:6;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23998057	24000380	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:7;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24000381	24000452	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:8;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24000381	24000452	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:7;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24000453	24002771	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:8;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24002772	24002843	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:9;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24002772	24002843	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:8;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24002844	24005214	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:9;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24005215	24005286	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:10;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24005215	24005286	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:9;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24005287	24017536	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:10;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24017537	24017676	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:11;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24017537	24017676	.	-	2	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:10;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24017677	24017765	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:11;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24017766	24017829	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:12;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24017766	24017829	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:11;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24017830	24018265	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:12;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24018266	24018317	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:13;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24018266	24018317	.	-	1	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:12;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24018318	24018877	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:13;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24018878	24018969	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:14;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24018878	24018969	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:13;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24018970	24019243	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:14;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24019244	24019390	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:15;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24019244	24019390	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:14;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24019391	24025991	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001810:15;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24025992	24026301	.	-	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001810:16;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24025992	24025994	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001810:15;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	24025992	24025994	.	-	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001810;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001810;transcript_name=CHM13_chrY_T0001810;gene_name=DAZ3;ID=start_codon:CHM13_chrY_T0001810;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23965003	24026278	9980	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_G0000641;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CHM13_chrY_T0001811;Name=DAZ3
CHM13_chrY	CAT	exon	23965003	23966859	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:0;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23966860	23970832	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:0;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23970833	23970931	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:1;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23970868	23970931	.	-	1	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:0;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	23970868	23970870	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=stop_codon:CHM13_chrY_T0001811;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23970932	23975503	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:1;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23975504	23975538	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:2;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23975504	23975538	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:1;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23975539	23976283	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:2;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23976284	23976355	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:3;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23976284	23976355	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:2;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23976356	23986070	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:3;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23986071	23986142	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:4;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23986071	23986142	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:3;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23986143	23990827	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:4;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23990828	23990899	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:5;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23990828	23990899	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:4;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23990900	23995600	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:5;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23995601	23995672	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:6;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23995601	23995672	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:5;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23995673	24000380	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:6;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24000381	24000452	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:7;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24000381	24000452	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:6;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24000453	24002771	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:7;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24002772	24002843	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:8;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24002772	24002843	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:7;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24002844	24005214	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:8;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24005215	24005286	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:9;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24005215	24005286	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:8;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24005287	24017536	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:9;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24017537	24017676	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:10;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24017537	24017676	.	-	2	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:9;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24017677	24017765	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:10;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24017766	24017829	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:11;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24017766	24017829	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:10;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24017830	24018265	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:11;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24018266	24018317	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:12;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24018266	24018317	.	-	1	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:11;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24018318	24018877	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:12;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24018878	24018969	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:13;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24018878	24018969	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:12;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24018970	24019243	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:13;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24019244	24019390	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:14;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24019244	24019390	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:13;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24019391	24025991	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001811:14;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24025992	24026278	.	-	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001811:15;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24025992	24025994	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001811:14;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	24025992	24025994	.	-	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=299.455;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001811;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001811;transcript_name=CHM13_chrY_T0001811;gene_name=DAZ3;ID=start_codon:CHM13_chrY_T0001811;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23965003	24026202	9980	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_G0000641;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CHM13_chrY_T0001812;Name=DAZ3
CHM13_chrY	CAT	exon	23965003	23966859	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:0;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23966860	23970832	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:0;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23970833	23970931	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:1;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23970868	23970931	.	-	1	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:0;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	23970868	23970870	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=stop_codon:CHM13_chrY_T0001812;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23970932	23975503	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:1;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23975504	23975538	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:2;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23975504	23975538	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:1;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23975539	23976283	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:2;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23976284	23976355	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:3;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23976284	23976355	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:2;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23976356	23986070	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:3;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23986071	23986142	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:4;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23986071	23986142	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:3;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23986143	23988447	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:4;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23988448	23988519	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:5;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23988448	23988519	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:4;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23988520	23990827	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:5;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23990828	23990899	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:6;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23990828	23990899	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:5;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23990900	23993204	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:6;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23993205	23993276	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:7;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23993205	23993276	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:6;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23993277	23995600	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:7;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23995601	23995672	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:8;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23995601	23995672	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:7;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23995673	23997984	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:8;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23997985	23998056	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:9;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	23997985	23998056	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:8;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23998057	24000380	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:9;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24000381	24000452	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:10;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24000381	24000452	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:9;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24000453	24002771	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:10;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24002772	24002843	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:11;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24002772	24002843	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:10;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24002844	24005214	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:11;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24005215	24005286	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:12;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24005215	24005286	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:11;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24005287	24017536	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:12;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24017537	24017676	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:13;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24017537	24017676	.	-	2	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:12;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24017677	24017765	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:13;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24017766	24017829	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:14;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24017766	24017829	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:13;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24017830	24018265	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:14;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24018266	24018317	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:15;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24018266	24018317	.	-	1	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:14;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24018318	24018877	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:15;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24018878	24018969	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:16;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24018878	24018969	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:15;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24018970	24019243	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:16;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24019244	24019390	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:17;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24019244	24019390	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:16;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24019391	24025991	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001812:17;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24025992	24026202	.	-	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001812:18;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24025992	24025994	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=CDS:CHM13_chrY_T0001812:17;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	24025992	24025994	.	-	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=299.544;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001812;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001812;transcript_name=CHM13_chrY_T0001812;gene_name=DAZ3;ID=start_codon:CHM13_chrY_T0001812;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23965011	23976470	1000	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001813;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_G0000641;transcript_name=CHM13_chrY_T0001813;gene_name=DAZ3;ID=CHM13_chrY_T0001813;Name=DAZ3
CHM13_chrY	CAT	exon	23965011	23966859	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001813;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001813;transcript_name=CHM13_chrY_T0001813;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001813:0;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23966860	23970832	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001813;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001813;transcript_name=CHM13_chrY_T0001813;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001813:0;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23970833	23970931	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001813;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001813;transcript_name=CHM13_chrY_T0001813;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001813:1;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23970932	23973866	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001813;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001813;transcript_name=CHM13_chrY_T0001813;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001813:1;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23973867	23973938	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001813;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001813;transcript_name=CHM13_chrY_T0001813;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001813:2;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23973939	23975503	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001813;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001813;transcript_name=CHM13_chrY_T0001813;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001813:2;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23975504	23975538	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001813;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001813;transcript_name=CHM13_chrY_T0001813;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001813:3;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23975539	23976283	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001813;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001813;transcript_name=CHM13_chrY_T0001813;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001813:3;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23976284	23976470	.	-	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001813;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001813;transcript_name=CHM13_chrY_T0001813;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001813:4;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	23965691	23976482	1000	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001814;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_G0000641;transcript_name=CHM13_chrY_T0001814;gene_name=DAZ3;ID=CHM13_chrY_T0001814;Name=DAZ3
CHM13_chrY	CAT	exon	23965691	23966859	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001814;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001814;transcript_name=CHM13_chrY_T0001814;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001814:0;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23966860	23970832	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001814;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001814;transcript_name=CHM13_chrY_T0001814;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001814:0;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23970833	23970931	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001814;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001814;transcript_name=CHM13_chrY_T0001814;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001814:1;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23970932	23975503	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001814;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001814;transcript_name=CHM13_chrY_T0001814;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001814:1;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23975504	23975538	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001814;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001814;transcript_name=CHM13_chrY_T0001814;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001814:2;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	23975539	23976283	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001814;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001814;transcript_name=CHM13_chrY_T0001814;gene_name=DAZ3;ID=intron:CHM13_chrY_T0001814:2;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	23976284	23976482	.	-	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=CHM13_chrY_T0001814;gene_id=CHM13_chrY_G0000641;Parent=CHM13_chrY_T0001814;transcript_name=CHM13_chrY_T0001814;gene_name=DAZ3;ID=exon:CHM13_chrY_T0001814:3;Name=DAZ3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24046652	24099471	.	+	.	source_gene_common_name=DAZ4;source_gene=ENSG00000205916.12;gene_id=CHM13_chrY_G0000642;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=liftoff;ID=CHM13_chrY_G0000642;Name=DAZ4
CHM13_chrY	CAT	transcript	24046652	24099471	9920	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_G0000642;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=CHM13_chrY_T0001815;Name=DAZ4
CHM13_chrY	CAT	exon	24046652	24046938	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001815:0;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24046936	24046938	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001815:0;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	24046936	24046938	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=start_codon:CHM13_chrY_T0001815;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24046939	24056793	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001815:0;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24056794	24056865	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001815:1;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24056794	24056865	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001815:1;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24056866	24059236	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001815:1;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24059237	24059308	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001815:2;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24059237	24059308	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001815:2;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24059309	24076196	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001815:2;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24076197	24076268	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001815:3;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24076197	24076268	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001815:3;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24076269	24078581	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001815:3;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24078582	24078653	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001815:4;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24078582	24078653	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001815:4;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24078654	24080965	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001815:4;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24080966	24081037	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001815:5;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24080966	24081037	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001815:5;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24081038	24088117	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001815:5;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24088118	24088189	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001815:6;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24088118	24088189	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001815:6;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24088190	24088934	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001815:6;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24088935	24088969	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001815:7;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24088935	24088969	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001815:7;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24088970	24093541	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001815:7;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24093542	24093640	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001815:8;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24093542	24093605	.	+	1	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001815:8;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	24093603	24093605	.	+	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=stop_codon:CHM13_chrY_T0001815;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24093641	24097614	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001815:8;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24097615	24099471	.	+	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001815;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001815;transcript_name=CHM13_chrY_T0001815;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001815:9;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24046726	24099467	9930	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_G0000642;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CHM13_chrY_T0001816;Name=DAZ4
CHM13_chrY	CAT	exon	24046726	24046938	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:0;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24046936	24046938	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001816:0;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	24046936	24046938	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=start_codon:CHM13_chrY_T0001816;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24046939	24053539	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001816:0;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24053540	24053686	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:1;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24053540	24053686	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001816:1;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24053687	24053960	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001816:1;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24053961	24054052	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:2;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24053961	24054052	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001816:2;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24054053	24054612	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001816:2;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24054613	24054664	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:3;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24054613	24054664	.	+	1	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001816:3;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24054665	24055100	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001816:3;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24055101	24055164	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:4;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24055101	24055164	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001816:4;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24055165	24055253	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001816:4;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24055254	24055393	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:5;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24055254	24055393	.	+	2	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001816:5;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24055394	24056793	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001816:5;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24056794	24056865	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:6;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24056794	24056865	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001816:6;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24056866	24059236	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001816:6;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24059237	24059308	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:7;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24059237	24059308	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001816:7;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24059309	24061626	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001816:7;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24061627	24061698	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:8;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24061627	24061698	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001816:8;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24061699	24064022	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001816:8;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24064023	24064094	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:9;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24064023	24064094	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001816:9;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24064095	24088117	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001816:9;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24088118	24088189	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:10;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24088118	24088189	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001816:10;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24088190	24088934	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001816:10;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24088935	24088969	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:11;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24088935	24088969	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001816:11;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24088970	24093541	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001816:11;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24093542	24093640	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:12;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24093542	24093605	.	+	1	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001816:12;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	24093603	24093605	.	+	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=stop_codon:CHM13_chrY_T0001816;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24093641	24097614	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001816:12;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24097615	24099467	.	+	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001816;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001816;transcript_name=CHM13_chrY_T0001816;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001816:13;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24046726	24099467	9920	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_G0000642;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=CHM13_chrY_T0001817;Name=DAZ4
CHM13_chrY	CAT	exon	24046726	24046938	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001817:0;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24046936	24046938	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001817:0;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	24046936	24046938	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=start_codon:CHM13_chrY_T0001817;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24046939	24056793	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001817:0;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24056794	24056865	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001817:1;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24056794	24056865	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001817:1;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24056866	24059236	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001817:1;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24059237	24059308	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001817:2;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24059237	24059308	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001817:2;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24059309	24061626	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001817:2;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24061627	24061698	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001817:3;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24061627	24061698	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001817:3;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24061699	24064022	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001817:3;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24064023	24064094	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001817:4;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24064023	24064094	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001817:4;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24064095	24088117	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001817:4;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24088118	24088189	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001817:5;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24088118	24088189	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001817:5;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24088190	24088934	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001817:5;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24088935	24088969	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001817:6;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24088935	24088969	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001817:6;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24088970	24093541	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001817:6;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24093542	24093640	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001817:7;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24093542	24093605	.	+	1	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001817:7;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	24093603	24093605	.	+	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=stop_codon:CHM13_chrY_T0001817;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24093641	24097614	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001817:7;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24097615	24099467	.	+	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=189.085;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001817;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001817;transcript_name=CHM13_chrY_T0001817;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001817:8;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24046728	24099471	9940	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_G0000642;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CHM13_chrY_T0001818;Name=DAZ4
CHM13_chrY	CAT	exon	24046728	24046938	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:0;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24046936	24046938	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:0;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	24046936	24046938	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=start_codon:CHM13_chrY_T0001818;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24046939	24053539	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:0;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24053540	24053686	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:1;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24053540	24053686	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:1;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24053687	24053960	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:1;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24053961	24054052	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:2;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24053961	24054052	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:2;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24054053	24054612	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:2;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24054613	24054664	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:3;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24054613	24054664	.	+	1	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:3;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24054665	24055100	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:3;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24055101	24055164	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:4;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24055101	24055164	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:4;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24055165	24055253	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:4;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24055254	24055393	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:5;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24055254	24055393	.	+	2	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:5;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24055394	24056793	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:5;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24056794	24056865	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:6;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24056794	24056865	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:6;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24056866	24059236	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:6;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24059237	24059308	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:7;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24059237	24059308	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:7;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24059309	24061626	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:7;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24061627	24061698	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:8;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24061627	24061698	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:8;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24061699	24064022	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:8;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24064023	24064094	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:9;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24064023	24064094	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:9;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24064095	24076196	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:9;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24076197	24076268	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:10;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24076197	24076268	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:10;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24076269	24078581	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:10;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24078582	24078653	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:11;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24078582	24078653	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:11;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24078654	24080965	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:11;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24080966	24081037	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:12;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24080966	24081037	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:12;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24081038	24083349	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:12;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24083350	24083421	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:13;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24083350	24083421	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:13;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24083422	24085733	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:13;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24085734	24085805	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:14;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24085734	24085805	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:14;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24085806	24088117	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:14;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24088118	24088189	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:15;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24088118	24088189	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:15;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24088190	24088934	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:15;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24088935	24088969	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:16;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24088935	24088969	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:16;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24088970	24093541	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:16;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24093542	24093640	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:17;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24093542	24093605	.	+	1	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=CDS:CHM13_chrY_T0001818:17;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	24093603	24093605	.	+	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=stop_codon:CHM13_chrY_T0001818;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24093641	24097614	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=intron:CHM13_chrY_T0001818:17;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24097615	24099471	.	+	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=CHM13_chrY_T0001818;gene_id=CHM13_chrY_G0000642;Parent=CHM13_chrY_T0001818;transcript_name=CHM13_chrY_T0001818;gene_name=DAZ4;ID=exon:CHM13_chrY_T0001818:18;Name=DAZ4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24169616	24170761	.	-	.	source_gene_common_name=ENSG00000278602;source_gene=ENSG00000278602.1;gene_id=CHM13_chrY_G0000643;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000278602;gene_sources=liftoff;ID=CHM13_chrY_G0000643;Name=ENSG00000278602
CHM13_chrY	CAT	transcript	24169616	24170761	1000	-	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=CHM13_chrY_T0001819;gene_id=CHM13_chrY_G0000643;Parent=CHM13_chrY_G0000643;transcript_name=CHM13_chrY_T0001819;gene_name=ENSG00000278602;ID=CHM13_chrY_T0001819;Name=ENSG00000278602
CHM13_chrY	CAT	exon	24169616	24170139	.	-	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=CHM13_chrY_T0001819;gene_id=CHM13_chrY_G0000643;Parent=CHM13_chrY_T0001819;transcript_name=CHM13_chrY_T0001819;gene_name=ENSG00000278602;ID=exon:CHM13_chrY_T0001819:0;Name=ENSG00000278602;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24170140	24170494	.	-	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=CHM13_chrY_T0001819;gene_id=CHM13_chrY_G0000643;Parent=CHM13_chrY_T0001819;transcript_name=CHM13_chrY_T0001819;gene_name=ENSG00000278602;ID=intron:CHM13_chrY_T0001819:0;Name=ENSG00000278602;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24170495	24170761	.	-	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=CHM13_chrY_T0001819;gene_id=CHM13_chrY_G0000643;Parent=CHM13_chrY_T0001819;transcript_name=CHM13_chrY_T0001819;gene_name=ENSG00000278602;ID=exon:CHM13_chrY_T0001819:1;Name=ENSG00000278602;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24177645	24178920	.	-	.	source_gene_common_name=ZNF736P1Y;source_gene=ENSG00000223978.1;gene_id=CHM13_chrY_G0000644;gene_biotype=processed_pseudogene;gene_name=ZNF736P1Y;gene_sources=liftoff;ID=CHM13_chrY_G0000644;Name=ZNF736P1Y
CHM13_chrY	CAT	transcript	24177645	24178920	1000	-	.	source_transcript=ENST00000440402.1;source_transcript_name=ZNF736P1Y-201;source_gene=ENSG00000223978.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223978.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440402.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440402.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P1Y;transcript_id=CHM13_chrY_T0001820;gene_id=CHM13_chrY_G0000644;Parent=CHM13_chrY_G0000644;transcript_name=CHM13_chrY_T0001820;gene_name=ZNF736P1Y;ID=CHM13_chrY_T0001820;Name=ZNF736P1Y
CHM13_chrY	CAT	exon	24177645	24178920	.	-	.	source_transcript=ENST00000440402.1;source_transcript_name=ZNF736P1Y-201;source_gene=ENSG00000223978.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223978.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440402.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440402.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P1Y;transcript_id=CHM13_chrY_T0001820;gene_id=CHM13_chrY_G0000644;Parent=CHM13_chrY_T0001820;transcript_name=CHM13_chrY_T0001820;gene_name=ZNF736P1Y;ID=exon:CHM13_chrY_T0001820:0;Name=ZNF736P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24202143	24203212	.	-	.	source_gene_common_name=ENSG00000278197;source_gene=ENSG00000278197.1;gene_id=CHM13_chrY_G0000645;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000278197;gene_sources=liftoff;ID=CHM13_chrY_G0000645;Name=ENSG00000278197
CHM13_chrY	CAT	transcript	24202143	24203212	1000	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=CHM13_chrY_T0001821;gene_id=CHM13_chrY_G0000645;Parent=CHM13_chrY_G0000645;transcript_name=CHM13_chrY_T0001821;gene_name=ENSG00000278197;ID=CHM13_chrY_T0001821;Name=ENSG00000278197
CHM13_chrY	CAT	exon	24202143	24202664	.	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=CHM13_chrY_T0001821;gene_id=CHM13_chrY_G0000645;Parent=CHM13_chrY_T0001821;transcript_name=CHM13_chrY_T0001821;gene_name=ENSG00000278197;ID=exon:CHM13_chrY_T0001821:0;Name=ENSG00000278197;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24202665	24202985	.	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=CHM13_chrY_T0001821;gene_id=CHM13_chrY_G0000645;Parent=CHM13_chrY_T0001821;transcript_name=CHM13_chrY_T0001821;gene_name=ENSG00000278197;ID=intron:CHM13_chrY_T0001821:0;Name=ENSG00000278197;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24202986	24203212	.	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=CHM13_chrY_T0001821;gene_id=CHM13_chrY_G0000645;Parent=CHM13_chrY_T0001821;transcript_name=CHM13_chrY_T0001821;gene_name=ENSG00000278197;ID=exon:CHM13_chrY_T0001821:1;Name=ENSG00000278197;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24210988	24211746	.	-	.	source_gene_common_name=ENSG00000244000;source_gene=ENSG00000244000.1;gene_id=CHM13_chrY_G0000646;gene_biotype=processed_pseudogene;gene_name=ENSG00000244000;gene_sources=liftoff;ID=CHM13_chrY_G0000646;Name=ENSG00000244000
CHM13_chrY	CAT	transcript	24210988	24211746	1000	-	.	source_transcript=ENST00000422002.1;source_transcript_name=ENST00000422002;source_gene=ENSG00000244000.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244000.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422002.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000244000;transcript_id=CHM13_chrY_T0001822;gene_id=CHM13_chrY_G0000646;Parent=CHM13_chrY_G0000646;transcript_name=CHM13_chrY_T0001822;gene_name=ENSG00000244000;ID=CHM13_chrY_T0001822;Name=ENSG00000244000
CHM13_chrY	CAT	exon	24210988	24211746	.	-	.	source_transcript=ENST00000422002.1;source_transcript_name=ENST00000422002;source_gene=ENSG00000244000.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244000.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422002.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000244000;transcript_id=CHM13_chrY_T0001822;gene_id=CHM13_chrY_G0000646;Parent=CHM13_chrY_T0001822;transcript_name=CHM13_chrY_T0001822;gene_name=ENSG00000244000;ID=exon:CHM13_chrY_T0001822:0;Name=ENSG00000244000;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24223343	24254990	.	-	.	source_gene_common_name=BPY2B;source_gene=ENSG00000183795.8;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;gene_id=CHM13_chrY_G0000647;gene_biotype=protein_coding;gene_name=BPY2B;gene_sources=liftoff;ID=CHM13_chrY_G0000647;Name=BPY2B
CHM13_chrY	CAT	transcript	24223343	24244546	100	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_G0000647;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=CHM13_chrY_T0001823;Name=BPY2B
CHM13_chrY	CAT	exon	24223343	24223664	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001823:0;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24223665	24223758	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001823:0;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24223759	24223883	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001823:1;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24223884	24230433	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001823:1;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24230434	24230558	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001823:2;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24230540	24230558	.	-	1	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=CDS:CHM13_chrY_T0001823:0;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	24230540	24230542	.	-	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=stop_codon:CHM13_chrY_T0001823;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24230559	24231250	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001823:2;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24231251	24231356	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001823:3;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24231251	24231356	.	-	2	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=CDS:CHM13_chrY_T0001823:1;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24231357	24234210	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001823:3;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24234211	24234328	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001823:4;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24234211	24234328	.	-	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=CDS:CHM13_chrY_T0001823:2;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24234329	24236387	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001823:4;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24236388	24236506	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001823:5;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24236388	24236465	.	-	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=CDS:CHM13_chrY_T0001823:3;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	24236463	24236465	.	-	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=start_codon:CHM13_chrY_T0001823;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24236507	24240915	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001823:5;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24240916	24241052	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001823:6;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24241053	24244117	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001823:6;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24244118	24244240	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001823:7;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24244241	24244515	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001823:7;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24244516	24244546	.	-	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000382392.5;transcript_id=CHM13_chrY_T0001823;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001823;transcript_name=CHM13_chrY_T0001823;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001823:8;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24223402	24244522	1000	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_G0000647;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=CHM13_chrY_T0001824;Name=BPY2B
CHM13_chrY	CAT	exon	24223402	24223664	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001824:0;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24223665	24223753	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001824:0;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24223754	24223883	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001824:1;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24223884	24230433	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001824:1;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24230434	24230558	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001824:2;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24230559	24231250	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001824:2;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24231251	24231356	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001824:3;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24231357	24236387	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001824:3;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24236388	24236506	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001824:4;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24236507	24240915	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001824:4;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24240916	24241052	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001824:5;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24241053	24244117	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001824:5;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24244118	24244240	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001824:6;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24244241	24244515	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001824:6;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24244516	24244522	.	-	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602549.1;transcript_id=CHM13_chrY_T0001824;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001824;transcript_name=CHM13_chrY_T0001824;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001824:7;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24230540	24236465	100	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_G0000647;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=CHM13_chrY_T0001825;Name=BPY2B
CHM13_chrY	CAT	exon	24230540	24230558	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001825;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001825:0;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24230540	24230558	.	-	1	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001825;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=CDS:CHM13_chrY_T0001825:0;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	24230540	24230542	.	-	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001825;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=stop_codon:CHM13_chrY_T0001825;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24230559	24231250	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001825;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001825:0;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24231251	24231356	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001825;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001825:1;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24231251	24231356	.	-	2	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001825;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=CDS:CHM13_chrY_T0001825:1;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24231357	24234210	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001825;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001825:1;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24234211	24234328	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001825;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001825:2;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24234211	24234328	.	-	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001825;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=CDS:CHM13_chrY_T0001825:2;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24234329	24236387	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001825;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001825:2;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24236388	24236465	.	-	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001825;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001825:3;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24236388	24236465	.	-	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001825;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=CDS:CHM13_chrY_T0001825:3;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	24236463	24236465	.	-	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000615850.1;transcript_id=CHM13_chrY_T0001825;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001825;transcript_name=CHM13_chrY_T0001825;gene_name=BPY2B;ID=start_codon:CHM13_chrY_T0001825;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24236433	24254990	100	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=CHM13_chrY_T0001826;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_G0000647;transcript_name=CHM13_chrY_T0001826;gene_name=BPY2B;ID=CHM13_chrY_T0001826;Name=BPY2B
CHM13_chrY	CAT	exon	24236433	24236506	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=CHM13_chrY_T0001826;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001826;transcript_name=CHM13_chrY_T0001826;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001826:0;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24236433	24236465	.	-	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=CHM13_chrY_T0001826;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001826;transcript_name=CHM13_chrY_T0001826;gene_name=BPY2B;ID=CDS:CHM13_chrY_T0001826:0;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	24236433	24236435	.	-	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=CHM13_chrY_T0001826;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001826;transcript_name=CHM13_chrY_T0001826;gene_name=BPY2B;ID=stop_codon:CHM13_chrY_T0001826;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	24236463	24236465	.	-	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=CHM13_chrY_T0001826;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001826;transcript_name=CHM13_chrY_T0001826;gene_name=BPY2B;ID=start_codon:CHM13_chrY_T0001826;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24236507	24240915	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=CHM13_chrY_T0001826;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001826;transcript_name=CHM13_chrY_T0001826;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001826:0;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24240916	24241052	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=CHM13_chrY_T0001826;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001826;transcript_name=CHM13_chrY_T0001826;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001826:1;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24241053	24244117	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=CHM13_chrY_T0001826;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001826;transcript_name=CHM13_chrY_T0001826;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001826:1;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24244118	24244240	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=CHM13_chrY_T0001826;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001826;transcript_name=CHM13_chrY_T0001826;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001826:2;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24244241	24244592	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=CHM13_chrY_T0001826;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001826;transcript_name=CHM13_chrY_T0001826;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001826:2;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24244593	24244661	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=CHM13_chrY_T0001826;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001826;transcript_name=CHM13_chrY_T0001826;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001826:3;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24244662	24254834	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=CHM13_chrY_T0001826;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001826;transcript_name=CHM13_chrY_T0001826;gene_name=BPY2B;ID=intron:CHM13_chrY_T0001826:3;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24254835	24254990	.	-	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602770.5;transcript_id=CHM13_chrY_T0001826;gene_id=CHM13_chrY_G0000647;Parent=CHM13_chrY_T0001826;transcript_name=CHM13_chrY_T0001826;gene_name=BPY2B;ID=exon:CHM13_chrY_T0001826:4;Name=BPY2B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24255525	24292324	.	-	.	source_gene_common_name=TTTY4B;source_gene=ENSG00000235412.1;alternative_source_transcripts=ENST00000420149.1;gene_id=CHM13_chrY_G0000648;gene_biotype=lncRNA;gene_name=TTTY4B;gene_sources=liftoff;ID=CHM13_chrY_G0000648;Name=TTTY4B
CHM13_chrY	CAT	transcript	24255525	24292324	1000	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=CHM13_chrY_T0001827;gene_id=CHM13_chrY_G0000648;Parent=CHM13_chrY_G0000648;transcript_name=CHM13_chrY_T0001827;gene_name=TTTY4B;ID=CHM13_chrY_T0001827;Name=TTTY4B
CHM13_chrY	CAT	exon	24255525	24256525	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=CHM13_chrY_T0001827;gene_id=CHM13_chrY_G0000648;Parent=CHM13_chrY_T0001827;transcript_name=CHM13_chrY_T0001827;gene_name=TTTY4B;ID=exon:CHM13_chrY_T0001827:0;Name=TTTY4B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24256526	24263175	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=CHM13_chrY_T0001827;gene_id=CHM13_chrY_G0000648;Parent=CHM13_chrY_T0001827;transcript_name=CHM13_chrY_T0001827;gene_name=TTTY4B;ID=intron:CHM13_chrY_T0001827:0;Name=TTTY4B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24263176	24263283	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=CHM13_chrY_T0001827;gene_id=CHM13_chrY_G0000648;Parent=CHM13_chrY_T0001827;transcript_name=CHM13_chrY_T0001827;gene_name=TTTY4B;ID=exon:CHM13_chrY_T0001827:1;Name=TTTY4B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24263284	24265087	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=CHM13_chrY_T0001827;gene_id=CHM13_chrY_G0000648;Parent=CHM13_chrY_T0001827;transcript_name=CHM13_chrY_T0001827;gene_name=TTTY4B;ID=intron:CHM13_chrY_T0001827:1;Name=TTTY4B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24265088	24265163	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=CHM13_chrY_T0001827;gene_id=CHM13_chrY_G0000648;Parent=CHM13_chrY_T0001827;transcript_name=CHM13_chrY_T0001827;gene_name=TTTY4B;ID=exon:CHM13_chrY_T0001827:2;Name=TTTY4B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24265164	24292163	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=CHM13_chrY_T0001827;gene_id=CHM13_chrY_G0000648;Parent=CHM13_chrY_T0001827;transcript_name=CHM13_chrY_T0001827;gene_name=TTTY4B;ID=intron:CHM13_chrY_T0001827:2;Name=TTTY4B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24292164	24292324	.	-	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000420149.1;transcript_id=CHM13_chrY_T0001827;gene_id=CHM13_chrY_G0000648;Parent=CHM13_chrY_T0001827;transcript_name=CHM13_chrY_T0001827;gene_name=TTTY4B;ID=exon:CHM13_chrY_T0001827:3;Name=TTTY4B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24361025	24362267	.	+	.	source_gene_common_name=ZNF736P12Y;source_gene=ENSG00000232003.2;alternative_source_transcripts=ENST00000443152.1;gene_id=CHM13_chrY_G0000649;gene_biotype=processed_pseudogene;gene_name=ZNF736P12Y;gene_sources=liftoff;ID=CHM13_chrY_G0000649;Name=ZNF736P12Y
CHM13_chrY	CAT	transcript	24361025	24362267	1000	+	.	source_transcript=ENST00000443152.1;source_transcript_name=ZNF736P12Y-201;source_gene=ENSG00000232003.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232003.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443152.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P12Y;alternative_source_transcripts=ENST00000443152.1;transcript_id=CHM13_chrY_T0001828;gene_id=CHM13_chrY_G0000649;Parent=CHM13_chrY_G0000649;transcript_name=CHM13_chrY_T0001828;gene_name=ZNF736P12Y;ID=CHM13_chrY_T0001828;Name=ZNF736P12Y
CHM13_chrY	CAT	exon	24361025	24362267	.	+	.	source_transcript=ENST00000443152.1;source_transcript_name=ZNF736P12Y-201;source_gene=ENSG00000232003.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232003.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P12Y;alternative_source_transcripts=ENST00000443152.1;transcript_id=CHM13_chrY_T0001828;gene_id=CHM13_chrY_G0000649;Parent=CHM13_chrY_T0001828;transcript_name=CHM13_chrY_T0001828;gene_name=ZNF736P12Y;ID=exon:CHM13_chrY_T0001828:0;Name=ZNF736P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24366948	24367670	.	+	.	source_gene_common_name=ENSG00000276829;source_gene=ENSG00000276829.1;alternative_source_transcripts=ENST00000613297.1;gene_id=CHM13_chrY_G0000650;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000276829;gene_sources=liftoff;ID=CHM13_chrY_G0000650;Name=ENSG00000276829
CHM13_chrY	CAT	transcript	24366948	24367670	1000	+	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1;transcript_id=CHM13_chrY_T0001829;gene_id=CHM13_chrY_G0000650;Parent=CHM13_chrY_G0000650;transcript_name=CHM13_chrY_T0001829;gene_name=ENSG00000276829;ID=CHM13_chrY_T0001829;Name=ENSG00000276829
CHM13_chrY	CAT	exon	24366948	24367238	.	+	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1;transcript_id=CHM13_chrY_T0001829;gene_id=CHM13_chrY_G0000650;Parent=CHM13_chrY_T0001829;transcript_name=CHM13_chrY_T0001829;gene_name=ENSG00000276829;ID=exon:CHM13_chrY_T0001829:0;Name=ENSG00000276829;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24367239	24367509	.	+	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1;transcript_id=CHM13_chrY_T0001829;gene_id=CHM13_chrY_G0000650;Parent=CHM13_chrY_T0001829;transcript_name=CHM13_chrY_T0001829;gene_name=ENSG00000276829;ID=intron:CHM13_chrY_T0001829:0;Name=ENSG00000276829;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24367510	24367670	.	+	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1;transcript_id=CHM13_chrY_T0001829;gene_id=CHM13_chrY_G0000650;Parent=CHM13_chrY_T0001829;transcript_name=CHM13_chrY_T0001829;gene_name=ENSG00000276829;ID=exon:CHM13_chrY_T0001829:1;Name=ENSG00000276829;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24376068	24377200	.	-	.	source_gene_common_name=TTTY17B;source_gene=ENSG00000227439.1;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;gene_id=CHM13_chrY_G0000651;gene_biotype=lncRNA;gene_name=TTTY17B;gene_sources=liftoff;ID=CHM13_chrY_G0000651;Name=TTTY17B
CHM13_chrY	CAT	transcript	24376068	24377200	1000	-	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;transcript_id=CHM13_chrY_T0001830;gene_id=CHM13_chrY_G0000651;Parent=CHM13_chrY_G0000651;transcript_name=CHM13_chrY_T0001830;gene_name=TTTY17B;ID=CHM13_chrY_T0001830;Name=TTTY17B
CHM13_chrY	CAT	exon	24376068	24376173	.	-	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;transcript_id=CHM13_chrY_T0001830;gene_id=CHM13_chrY_G0000651;Parent=CHM13_chrY_T0001830;transcript_name=CHM13_chrY_T0001830;gene_name=TTTY17B;ID=exon:CHM13_chrY_T0001830:0;Name=TTTY17B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24376174	24377140	.	-	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;transcript_id=CHM13_chrY_T0001830;gene_id=CHM13_chrY_G0000651;Parent=CHM13_chrY_T0001830;transcript_name=CHM13_chrY_T0001830;gene_name=TTTY17B;ID=intron:CHM13_chrY_T0001830:0;Name=TTTY17B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24377141	24377200	.	-	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000441906.1;transcript_id=CHM13_chrY_T0001830;gene_id=CHM13_chrY_G0000651;Parent=CHM13_chrY_T0001830;transcript_name=CHM13_chrY_T0001830;gene_name=TTTY17B;ID=exon:CHM13_chrY_T0001830:1;Name=TTTY17B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24406591	24411681	.	+	.	source_gene_common_name=ENSG00000308317;source_gene=ENSG00000308317.1;alternative_source_transcripts=ENST00000833217.1;gene_id=CHM13_chrY_G0000652;gene_biotype=lncRNA;gene_name=ENSG00000308317;gene_sources=liftoff;ID=CHM13_chrY_G0000652;Name=ENSG00000308317
CHM13_chrY	CAT	transcript	24406591	24411681	1000	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=CHM13_chrY_T0001831;gene_id=CHM13_chrY_G0000652;Parent=CHM13_chrY_G0000652;transcript_name=CHM13_chrY_T0001831;gene_name=ENSG00000308317;ID=CHM13_chrY_T0001831;Name=ENSG00000308317
CHM13_chrY	CAT	exon	24406591	24406687	.	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=CHM13_chrY_T0001831;gene_id=CHM13_chrY_G0000652;Parent=CHM13_chrY_T0001831;transcript_name=CHM13_chrY_T0001831;gene_name=ENSG00000308317;ID=exon:CHM13_chrY_T0001831:0;Name=ENSG00000308317;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24406688	24411339	.	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=CHM13_chrY_T0001831;gene_id=CHM13_chrY_G0000652;Parent=CHM13_chrY_T0001831;transcript_name=CHM13_chrY_T0001831;gene_name=ENSG00000308317;ID=intron:CHM13_chrY_T0001831:0;Name=ENSG00000308317;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24411340	24411681	.	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;alternative_source_transcripts=ENST00000833217.1;transcript_id=CHM13_chrY_T0001831;gene_id=CHM13_chrY_G0000652;Parent=CHM13_chrY_T0001831;transcript_name=CHM13_chrY_T0001831;gene_name=ENSG00000308317;ID=exon:CHM13_chrY_T0001831:1;Name=ENSG00000308317;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24459006	24465936	.	+	.	source_gene_common_name=RBMY2XP;source_gene=ENSG00000234399.1;alternative_source_transcripts=ENST00000447471.1;gene_id=CHM13_chrY_G0000653;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2XP;gene_sources=liftoff;ID=CHM13_chrY_G0000653;Name=RBMY2XP
CHM13_chrY	CAT	transcript	24459006	24465936	1000	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=CHM13_chrY_T0001832;gene_id=CHM13_chrY_G0000653;Parent=CHM13_chrY_G0000653;transcript_name=CHM13_chrY_T0001832;gene_name=RBMY2XP;ID=CHM13_chrY_T0001832;Name=RBMY2XP
CHM13_chrY	CAT	exon	24459006	24459114	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=CHM13_chrY_T0001832;gene_id=CHM13_chrY_G0000653;Parent=CHM13_chrY_T0001832;transcript_name=CHM13_chrY_T0001832;gene_name=RBMY2XP;ID=exon:CHM13_chrY_T0001832:0;Name=RBMY2XP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24459115	24459530	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=CHM13_chrY_T0001832;gene_id=CHM13_chrY_G0000653;Parent=CHM13_chrY_T0001832;transcript_name=CHM13_chrY_T0001832;gene_name=RBMY2XP;ID=intron:CHM13_chrY_T0001832:0;Name=RBMY2XP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24459531	24459632	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=CHM13_chrY_T0001832;gene_id=CHM13_chrY_G0000653;Parent=CHM13_chrY_T0001832;transcript_name=CHM13_chrY_T0001832;gene_name=RBMY2XP;ID=exon:CHM13_chrY_T0001832:1;Name=RBMY2XP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24459633	24462020	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=CHM13_chrY_T0001832;gene_id=CHM13_chrY_G0000653;Parent=CHM13_chrY_T0001832;transcript_name=CHM13_chrY_T0001832;gene_name=RBMY2XP;ID=intron:CHM13_chrY_T0001832:1;Name=RBMY2XP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24462021	24462202	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=CHM13_chrY_T0001832;gene_id=CHM13_chrY_G0000653;Parent=CHM13_chrY_T0001832;transcript_name=CHM13_chrY_T0001832;gene_name=RBMY2XP;ID=exon:CHM13_chrY_T0001832:2;Name=RBMY2XP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24462203	24464938	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=CHM13_chrY_T0001832;gene_id=CHM13_chrY_G0000653;Parent=CHM13_chrY_T0001832;transcript_name=CHM13_chrY_T0001832;gene_name=RBMY2XP;ID=intron:CHM13_chrY_T0001832:2;Name=RBMY2XP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24464939	24465049	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=CHM13_chrY_T0001832;gene_id=CHM13_chrY_G0000653;Parent=CHM13_chrY_T0001832;transcript_name=CHM13_chrY_T0001832;gene_name=RBMY2XP;ID=exon:CHM13_chrY_T0001832:3;Name=RBMY2XP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24465050	24465130	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=CHM13_chrY_T0001832;gene_id=CHM13_chrY_G0000653;Parent=CHM13_chrY_T0001832;transcript_name=CHM13_chrY_T0001832;gene_name=RBMY2XP;ID=intron:CHM13_chrY_T0001832:3;Name=RBMY2XP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24465131	24465219	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=CHM13_chrY_T0001832;gene_id=CHM13_chrY_G0000653;Parent=CHM13_chrY_T0001832;transcript_name=CHM13_chrY_T0001832;gene_name=RBMY2XP;ID=exon:CHM13_chrY_T0001832:4;Name=RBMY2XP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24465220	24465634	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=CHM13_chrY_T0001832;gene_id=CHM13_chrY_G0000653;Parent=CHM13_chrY_T0001832;transcript_name=CHM13_chrY_T0001832;gene_name=RBMY2XP;ID=intron:CHM13_chrY_T0001832:4;Name=RBMY2XP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24465635	24465936	.	+	.	source_transcript=ENST00000447471.1;source_transcript_name=RBMY2XP-201;source_gene=ENSG00000234399.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234399.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2XP;alternative_source_transcripts=ENST00000447471.1;transcript_id=CHM13_chrY_T0001832;gene_id=CHM13_chrY_G0000653;Parent=CHM13_chrY_T0001832;transcript_name=CHM13_chrY_T0001832;gene_name=RBMY2XP;ID=exon:CHM13_chrY_T0001832:5;Name=RBMY2XP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24500151	24500225	.	+	.	source_gene_common_name=ENSG00000279274;source_gene=ENSG00000279274.2;alternative_source_transcripts=ENST00000624575.2;gene_id=CHM13_chrY_G0000654;gene_biotype=processed_pseudogene;gene_name=ENSG00000279274;gene_sources=liftoff;ID=CHM13_chrY_G0000654;Name=ENSG00000279274
CHM13_chrY	CAT	transcript	24500151	24500225	1000	+	.	source_transcript=ENST00000624575.2;source_transcript_name=ENST00000624575;source_gene=ENSG00000279274.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279274.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624575.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624575.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279274;alternative_source_transcripts=ENST00000624575.2;transcript_id=CHM13_chrY_T0001833;gene_id=CHM13_chrY_G0000654;Parent=CHM13_chrY_G0000654;transcript_name=CHM13_chrY_T0001833;gene_name=ENSG00000279274;ID=CHM13_chrY_T0001833;Name=ENSG00000279274
CHM13_chrY	CAT	exon	24500151	24500225	.	+	.	source_transcript=ENST00000624575.2;source_transcript_name=ENST00000624575;source_gene=ENSG00000279274.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279274.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624575.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624575.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279274;alternative_source_transcripts=ENST00000624575.2;transcript_id=CHM13_chrY_T0001833;gene_id=CHM13_chrY_G0000654;Parent=CHM13_chrY_T0001833;transcript_name=CHM13_chrY_T0001833;gene_name=ENSG00000279274;ID=exon:CHM13_chrY_T0001833:0;Name=ENSG00000279274;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24540925	24550007	.	+	.	source_gene_common_name=ENSG00000306111;source_gene=ENSG00000306111.1;alternative_source_transcripts=ENST00000815376.1;gene_id=CHM13_chrY_G0000655;gene_biotype=lncRNA;gene_name=ENSG00000306111;gene_sources=liftoff;ID=CHM13_chrY_G0000655;Name=ENSG00000306111
CHM13_chrY	CAT	transcript	24540925	24550007	1000	+	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1;transcript_id=CHM13_chrY_T0001834;gene_id=CHM13_chrY_G0000655;Parent=CHM13_chrY_G0000655;transcript_name=CHM13_chrY_T0001834;gene_name=ENSG00000306111;ID=CHM13_chrY_T0001834;Name=ENSG00000306111
CHM13_chrY	CAT	exon	24540925	24541098	.	+	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1;transcript_id=CHM13_chrY_T0001834;gene_id=CHM13_chrY_G0000655;Parent=CHM13_chrY_T0001834;transcript_name=CHM13_chrY_T0001834;gene_name=ENSG00000306111;ID=exon:CHM13_chrY_T0001834:0;Name=ENSG00000306111;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24541099	24548914	.	+	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1;transcript_id=CHM13_chrY_T0001834;gene_id=CHM13_chrY_G0000655;Parent=CHM13_chrY_T0001834;transcript_name=CHM13_chrY_T0001834;gene_name=ENSG00000306111;ID=intron:CHM13_chrY_T0001834:0;Name=ENSG00000306111;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24548915	24550007	.	+	.	source_transcript=ENST00000815376.1;source_transcript_name=ENST00000815376;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815376.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815376.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815376.1;transcript_id=CHM13_chrY_T0001834;gene_id=CHM13_chrY_G0000655;Parent=CHM13_chrY_T0001834;transcript_name=CHM13_chrY_T0001834;gene_name=ENSG00000306111;ID=exon:CHM13_chrY_T0001834:1;Name=ENSG00000306111;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24541002	24541782	1000	+	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1;transcript_id=CHM13_chrY_T0001835;gene_id=CHM13_chrY_G0000655;Parent=CHM13_chrY_G0000655;transcript_name=CHM13_chrY_T0001835;gene_name=ENSG00000306111;ID=CHM13_chrY_T0001835;Name=ENSG00000306111
CHM13_chrY	CAT	exon	24541002	24541098	.	+	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1;transcript_id=CHM13_chrY_T0001835;gene_id=CHM13_chrY_G0000655;Parent=CHM13_chrY_T0001835;transcript_name=CHM13_chrY_T0001835;gene_name=ENSG00000306111;ID=exon:CHM13_chrY_T0001835:0;Name=ENSG00000306111;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24541099	24541542	.	+	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1;transcript_id=CHM13_chrY_T0001835;gene_id=CHM13_chrY_G0000655;Parent=CHM13_chrY_T0001835;transcript_name=CHM13_chrY_T0001835;gene_name=ENSG00000306111;ID=intron:CHM13_chrY_T0001835:0;Name=ENSG00000306111;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24541543	24541782	.	+	.	source_transcript=ENST00000815377.1;source_transcript_name=ENST00000815377;source_gene=ENSG00000306111.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306111.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000815377.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000815377.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306111;alternative_source_transcripts=ENST00000815377.1;transcript_id=CHM13_chrY_T0001835;gene_id=CHM13_chrY_G0000655;Parent=CHM13_chrY_T0001835;transcript_name=CHM13_chrY_T0001835;gene_name=ENSG00000306111;ID=exon:CHM13_chrY_T0001835:1;Name=ENSG00000306111;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24579347	24579515	.	-	.	source_gene_common_name=SEPTIN14P22;source_gene=ENSG00000248792.2;gene_id=CHM13_chrY_G0000656;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=SEPTIN14P22;gene_sources=liftoff;ID=CHM13_chrY_G0000656;Name=SEPTIN14P22
CHM13_chrY	CAT	transcript	24579347	24579515	1000	-	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;transcript_id=CHM13_chrY_T0001836;gene_id=CHM13_chrY_G0000656;Parent=CHM13_chrY_G0000656;transcript_name=CHM13_chrY_T0001836;gene_name=SEPTIN14P22;ID=CHM13_chrY_T0001836;Name=SEPTIN14P22
CHM13_chrY	CAT	exon	24579347	24579515	.	-	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;transcript_id=CHM13_chrY_T0001836;gene_id=CHM13_chrY_G0000656;Parent=CHM13_chrY_T0001836;transcript_name=CHM13_chrY_T0001836;gene_name=SEPTIN14P22;ID=exon:CHM13_chrY_T0001836:0;Name=SEPTIN14P22;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24581422	24584241	.	+	.	source_gene_common_name=CICP1;source_gene=ENSG00000233652.1;gene_id=CHM13_chrY_G0000657;gene_biotype=processed_pseudogene;gene_name=CICP1;gene_sources=liftoff;ID=CHM13_chrY_G0000657;Name=CICP1
CHM13_chrY	CAT	transcript	24581422	24584241	1000	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;transcript_id=CHM13_chrY_T0001837;gene_id=CHM13_chrY_G0000657;Parent=CHM13_chrY_G0000657;transcript_name=CHM13_chrY_T0001837;gene_name=CICP1;ID=CHM13_chrY_T0001837;Name=CICP1
CHM13_chrY	CAT	exon	24581422	24583704	.	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;transcript_id=CHM13_chrY_T0001837;gene_id=CHM13_chrY_G0000657;Parent=CHM13_chrY_T0001837;transcript_name=CHM13_chrY_T0001837;gene_name=CICP1;ID=exon:CHM13_chrY_T0001837:0;Name=CICP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24583705	24584114	.	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;transcript_id=CHM13_chrY_T0001837;gene_id=CHM13_chrY_G0000657;Parent=CHM13_chrY_T0001837;transcript_name=CHM13_chrY_T0001837;gene_name=CICP1;ID=intron:CHM13_chrY_T0001837:0;Name=CICP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24584115	24584241	.	+	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;transcript_id=CHM13_chrY_T0001837;gene_id=CHM13_chrY_G0000657;Parent=CHM13_chrY_T0001837;transcript_name=CHM13_chrY_T0001837;gene_name=CICP1;ID=exon:CHM13_chrY_T0001837:1;Name=CICP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24585552	24586333	.	-	.	source_gene_common_name=LINC00265-2P;source_gene=ENSG00000224827.1;gene_id=CHM13_chrY_G0000658;gene_biotype=processed_pseudogene;gene_name=LINC00265-2P;gene_sources=transMap_pairwise;ID=CHM13_chrY_G0000658;Name=LINC00265-2P
CHM13_chrY	CAT	transcript	24585552	24586333	1000	-	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000413372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;transcript_id=CHM13_chrY_T0001838;gene_id=CHM13_chrY_G0000658;Parent=CHM13_chrY_G0000658;transcript_name=CHM13_chrY_T0001838;gene_name=LINC00265-2P;ID=CHM13_chrY_T0001838;Name=LINC00265-2P
CHM13_chrY	CAT	exon	24585552	24586333	.	-	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000413372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;transcript_id=CHM13_chrY_T0001838;gene_id=CHM13_chrY_G0000658;Parent=CHM13_chrY_T0001838;transcript_name=CHM13_chrY_T0001838;gene_name=LINC00265-2P;ID=exon:CHM13_chrY_T0001838:0;Name=LINC00265-2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24585584	24586487	.	-	.	source_gene_common_name=LINC00265-3P;source_gene=ENSG00000233944.1;gene_id=CHM13_chrY_G0000659;gene_biotype=processed_pseudogene;gene_name=LINC00265-3P;gene_sources=liftoff;ID=CHM13_chrY_G0000659;Name=LINC00265-3P
CHM13_chrY	CAT	transcript	24585584	24586487	1000	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447588.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;transcript_id=CHM13_chrY_T0001839;gene_id=CHM13_chrY_G0000659;Parent=CHM13_chrY_G0000659;transcript_name=CHM13_chrY_T0001839;gene_name=LINC00265-3P;ID=CHM13_chrY_T0001839;Name=LINC00265-3P
CHM13_chrY	CAT	exon	24585584	24586487	.	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447588.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;transcript_id=CHM13_chrY_T0001839;gene_id=CHM13_chrY_G0000659;Parent=CHM13_chrY_T0001839;transcript_name=CHM13_chrY_T0001839;gene_name=LINC00265-3P;ID=exon:CHM13_chrY_T0001839:0;Name=LINC00265-3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24623590	24629750	.	+	.	source_gene_common_name=UBE2Q2P5Y;source_gene=ENSG00000223636.1;alternative_source_transcripts=ENST00000433767.1;gene_id=CHM13_chrY_G0000660;gene_biotype=unprocessed_pseudogene;gene_name=UBE2Q2P5Y;gene_sources=liftoff;ID=CHM13_chrY_G0000660;Name=UBE2Q2P5Y
CHM13_chrY	CAT	transcript	24623590	24629750	1000	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=CHM13_chrY_T0001840;gene_id=CHM13_chrY_G0000660;Parent=CHM13_chrY_G0000660;transcript_name=CHM13_chrY_T0001840;gene_name=UBE2Q2P5Y;ID=CHM13_chrY_T0001840;Name=UBE2Q2P5Y
CHM13_chrY	CAT	exon	24623590	24623691	.	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=CHM13_chrY_T0001840;gene_id=CHM13_chrY_G0000660;Parent=CHM13_chrY_T0001840;transcript_name=CHM13_chrY_T0001840;gene_name=UBE2Q2P5Y;ID=exon:CHM13_chrY_T0001840:0;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24623692	24629645	.	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=CHM13_chrY_T0001840;gene_id=CHM13_chrY_G0000660;Parent=CHM13_chrY_T0001840;transcript_name=CHM13_chrY_T0001840;gene_name=UBE2Q2P5Y;ID=intron:CHM13_chrY_T0001840:0;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24629646	24629750	.	+	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=CHM13_chrY_T0001840;gene_id=CHM13_chrY_G0000660;Parent=CHM13_chrY_T0001840;transcript_name=CHM13_chrY_T0001840;gene_name=UBE2Q2P5Y;ID=exon:CHM13_chrY_T0001840:1;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24646995	24653007	.	+	.	source_gene_common_name=GOLGA2P3Y;source_gene=ENSG00000172297.7;gene_id=CHM13_chrY_G0000661;gene_biotype=unprocessed_pseudogene;gene_name=GOLGA2P3Y;gene_sources=liftoff;ID=CHM13_chrY_G0000661;Name=GOLGA2P3Y
CHM13_chrY	CAT	transcript	24646995	24653007	1000	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_G0000661;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=CHM13_chrY_T0001841;Name=GOLGA2P3Y
CHM13_chrY	CAT	exon	24646995	24647114	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24647115	24647727	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=intron:CHM13_chrY_T0001841:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24647728	24647787	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24647788	24647973	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=intron:CHM13_chrY_T0001841:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24647974	24648052	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24648053	24649172	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=intron:CHM13_chrY_T0001841:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24649173	24649522	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24649523	24649820	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=intron:CHM13_chrY_T0001841:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24649821	24649878	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24649879	24650908	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=intron:CHM13_chrY_T0001841:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24650909	24650978	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24650979	24650997	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=intron:CHM13_chrY_T0001841:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24650998	24651158	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24651159	24651234	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=intron:CHM13_chrY_T0001841:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24651235	24651309	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24651310	24651729	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=intron:CHM13_chrY_T0001841:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24651730	24651818	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24651819	24652073	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=intron:CHM13_chrY_T0001841:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24652074	24652262	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24652263	24652351	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=intron:CHM13_chrY_T0001841:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24652352	24652444	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24652445	24652526	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=intron:CHM13_chrY_T0001841:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24652527	24652617	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:11;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24652618	24652699	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=intron:CHM13_chrY_T0001841:11;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24652700	24652855	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:12;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24652856	24652945	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=intron:CHM13_chrY_T0001841:12;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24652946	24653007	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=CHM13_chrY_T0001841;gene_id=CHM13_chrY_G0000661;Parent=CHM13_chrY_T0001841;transcript_name=CHM13_chrY_T0001841;gene_name=GOLGA2P3Y;ID=exon:CHM13_chrY_T0001841:13;Name=GOLGA2P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24651361	24651619	.	+	.	source_gene_common_name=RN7SL725P;source_gene=ENSG00000278242.1;alternative_source_transcripts=ENST00000485099.3;gene_id=CHM13_chrY_G0000662;gene_biotype=misc_RNA;gene_name=RN7SL725P;gene_sources=liftoff;ID=CHM13_chrY_G0000662;Name=RN7SL725P
CHM13_chrY	CAT	transcript	24651361	24651619	1000	+	.	source_transcript=ENST00000606439.2;source_transcript_name=RN7SL725P-201;source_gene=ENSG00000278242.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278242.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000606439.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000606439.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL725P;alternative_source_transcripts=ENST00000485099.3;transcript_id=CHM13_chrY_T0001842;gene_id=CHM13_chrY_G0000662;Parent=CHM13_chrY_G0000662;transcript_name=CHM13_chrY_T0001842;gene_name=RN7SL725P;ID=CHM13_chrY_T0001842;Name=RN7SL725P
CHM13_chrY	CAT	exon	24651361	24651619	.	+	.	source_transcript=ENST00000606439.2;source_transcript_name=RN7SL725P-201;source_gene=ENSG00000278242.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278242.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000606439.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000606439.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL725P;alternative_source_transcripts=ENST00000485099.3;transcript_id=CHM13_chrY_T0001842;gene_id=CHM13_chrY_G0000662;Parent=CHM13_chrY_T0001842;transcript_name=CHM13_chrY_T0001842;gene_name=RN7SL725P;ID=exon:CHM13_chrY_T0001842:0;Name=RN7SL725P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24656441	24666054	.	+	.	source_gene_common_name=ENSG00000284071;source_gene=ENSG00000284071.1;gene_id=CHM13_chrY_G0000663;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000284071;gene_sources=liftoff;ID=CHM13_chrY_G0000663;Name=ENSG00000284071
CHM13_chrY	CAT	transcript	24656441	24666054	1000	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=CHM13_chrY_T0001843;gene_id=CHM13_chrY_G0000663;Parent=CHM13_chrY_G0000663;transcript_name=CHM13_chrY_T0001843;gene_name=ENSG00000284071;ID=CHM13_chrY_T0001843;Name=ENSG00000284071
CHM13_chrY	CAT	exon	24656441	24656525	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=CHM13_chrY_T0001843;gene_id=CHM13_chrY_G0000663;Parent=CHM13_chrY_T0001843;transcript_name=CHM13_chrY_T0001843;gene_name=ENSG00000284071;ID=exon:CHM13_chrY_T0001843:0;Name=ENSG00000284071;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24656526	24657946	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=CHM13_chrY_T0001843;gene_id=CHM13_chrY_G0000663;Parent=CHM13_chrY_T0001843;transcript_name=CHM13_chrY_T0001843;gene_name=ENSG00000284071;ID=intron:CHM13_chrY_T0001843:0;Name=ENSG00000284071;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24657947	24658096	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=CHM13_chrY_T0001843;gene_id=CHM13_chrY_G0000663;Parent=CHM13_chrY_T0001843;transcript_name=CHM13_chrY_T0001843;gene_name=ENSG00000284071;ID=exon:CHM13_chrY_T0001843:1;Name=ENSG00000284071;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24658097	24665892	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=CHM13_chrY_T0001843;gene_id=CHM13_chrY_G0000663;Parent=CHM13_chrY_T0001843;transcript_name=CHM13_chrY_T0001843;gene_name=ENSG00000284071;ID=intron:CHM13_chrY_T0001843:1;Name=ENSG00000284071;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24665893	24666054	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=CHM13_chrY_T0001843;gene_id=CHM13_chrY_G0000663;Parent=CHM13_chrY_T0001843;transcript_name=CHM13_chrY_T0001843;gene_name=ENSG00000284071;ID=exon:CHM13_chrY_T0001843:2;Name=ENSG00000284071;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24656533	24673078	.	+	.	source_gene_common_name=ENSG00000296017;source_gene=ENSG00000296017.1;gene_id=CHM13_chrY_G0000664;gene_biotype=lncRNA;gene_name=ENSG00000296017;gene_sources=liftoff;ID=CHM13_chrY_G0000664;Name=ENSG00000296017
CHM13_chrY	CAT	transcript	24656533	24666113	1000	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001844;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_G0000664;transcript_name=CHM13_chrY_T0001844;gene_name=ENSG00000296017;ID=CHM13_chrY_T0001844;Name=ENSG00000296017
CHM13_chrY	CAT	exon	24656533	24656900	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001844;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001844;transcript_name=CHM13_chrY_T0001844;gene_name=ENSG00000296017;ID=exon:CHM13_chrY_T0001844:0;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24656901	24657946	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001844;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001844;transcript_name=CHM13_chrY_T0001844;gene_name=ENSG00000296017;ID=intron:CHM13_chrY_T0001844:0;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24657947	24658096	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001844;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001844;transcript_name=CHM13_chrY_T0001844;gene_name=ENSG00000296017;ID=exon:CHM13_chrY_T0001844:1;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24658097	24665892	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001844;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001844;transcript_name=CHM13_chrY_T0001844;gene_name=ENSG00000296017;ID=intron:CHM13_chrY_T0001844:1;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24665893	24666113	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001844;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001844;transcript_name=CHM13_chrY_T0001844;gene_name=ENSG00000296017;ID=exon:CHM13_chrY_T0001844:2;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24656534	24673078	1000	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001845;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_G0000664;transcript_name=CHM13_chrY_T0001845;gene_name=ENSG00000296017;ID=CHM13_chrY_T0001845;Name=ENSG00000296017
CHM13_chrY	CAT	exon	24656534	24656900	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001845;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001845;transcript_name=CHM13_chrY_T0001845;gene_name=ENSG00000296017;ID=exon:CHM13_chrY_T0001845:0;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24656901	24657917	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001845;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001845;transcript_name=CHM13_chrY_T0001845;gene_name=ENSG00000296017;ID=intron:CHM13_chrY_T0001845:0;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24657918	24658096	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001845;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001845;transcript_name=CHM13_chrY_T0001845;gene_name=ENSG00000296017;ID=exon:CHM13_chrY_T0001845:1;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24658097	24665892	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001845;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001845;transcript_name=CHM13_chrY_T0001845;gene_name=ENSG00000296017;ID=intron:CHM13_chrY_T0001845:1;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24665893	24665997	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001845;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001845;transcript_name=CHM13_chrY_T0001845;gene_name=ENSG00000296017;ID=exon:CHM13_chrY_T0001845:2;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24665998	24670701	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001845;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001845;transcript_name=CHM13_chrY_T0001845;gene_name=ENSG00000296017;ID=intron:CHM13_chrY_T0001845:2;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24670702	24670865	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001845;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001845;transcript_name=CHM13_chrY_T0001845;gene_name=ENSG00000296017;ID=exon:CHM13_chrY_T0001845:3;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24670866	24672503	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001845;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001845;transcript_name=CHM13_chrY_T0001845;gene_name=ENSG00000296017;ID=intron:CHM13_chrY_T0001845:3;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24672504	24673078	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001845;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001845;transcript_name=CHM13_chrY_T0001845;gene_name=ENSG00000296017;ID=exon:CHM13_chrY_T0001845:4;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24656688	24666113	1000	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001846;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_G0000664;transcript_name=CHM13_chrY_T0001846;gene_name=ENSG00000296017;ID=CHM13_chrY_T0001846;Name=ENSG00000296017
CHM13_chrY	CAT	exon	24656688	24656900	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001846;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001846;transcript_name=CHM13_chrY_T0001846;gene_name=ENSG00000296017;ID=exon:CHM13_chrY_T0001846:0;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24656901	24657917	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001846;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001846;transcript_name=CHM13_chrY_T0001846;gene_name=ENSG00000296017;ID=intron:CHM13_chrY_T0001846:0;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24657918	24658096	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001846;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001846;transcript_name=CHM13_chrY_T0001846;gene_name=ENSG00000296017;ID=exon:CHM13_chrY_T0001846:1;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24658097	24665892	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001846;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001846;transcript_name=CHM13_chrY_T0001846;gene_name=ENSG00000296017;ID=intron:CHM13_chrY_T0001846:1;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24665893	24666113	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=CHM13_chrY_T0001846;gene_id=CHM13_chrY_G0000664;Parent=CHM13_chrY_T0001846;transcript_name=CHM13_chrY_T0001846;gene_name=ENSG00000296017;ID=exon:CHM13_chrY_T0001846:2;Name=ENSG00000296017;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24675341	24679138	.	+	.	source_gene_common_name=CSPG4P1Y;source_gene=ENSG00000240450.1;gene_id=CHM13_chrY_G0000665;gene_biotype=lncRNA;gene_name=CSPG4P1Y;gene_sources=liftoff;ID=CHM13_chrY_G0000665;Name=CSPG4P1Y
CHM13_chrY	CAT	transcript	24675341	24679138	1000	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=CHM13_chrY_T0001847;gene_id=CHM13_chrY_G0000665;Parent=CHM13_chrY_G0000665;transcript_name=CHM13_chrY_T0001847;gene_name=CSPG4P1Y;ID=CHM13_chrY_T0001847;Name=CSPG4P1Y
CHM13_chrY	CAT	exon	24675341	24676063	.	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=CHM13_chrY_T0001847;gene_id=CHM13_chrY_G0000665;Parent=CHM13_chrY_T0001847;transcript_name=CHM13_chrY_T0001847;gene_name=CSPG4P1Y;ID=exon:CHM13_chrY_T0001847:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24676064	24679066	.	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=CHM13_chrY_T0001847;gene_id=CHM13_chrY_G0000665;Parent=CHM13_chrY_T0001847;transcript_name=CHM13_chrY_T0001847;gene_name=CSPG4P1Y;ID=intron:CHM13_chrY_T0001847:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24679067	24679138	.	+	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=CHM13_chrY_T0001847;gene_id=CHM13_chrY_G0000665;Parent=CHM13_chrY_T0001847;transcript_name=CHM13_chrY_T0001847;gene_name=CSPG4P1Y;ID=exon:CHM13_chrY_T0001847:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24679073	24679755	.	+	.	source_gene_common_name=DNM1P48;source_gene=ENSG00000239304.1;gene_id=CHM13_chrY_G0000666;gene_biotype=transcribed_processed_pseudogene;gene_name=DNM1P48;gene_sources=liftoff;ID=CHM13_chrY_G0000666;Name=DNM1P48
CHM13_chrY	CAT	transcript	24679073	24679755	1000	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=CHM13_chrY_T0001848;gene_id=CHM13_chrY_G0000666;Parent=CHM13_chrY_G0000666;transcript_name=CHM13_chrY_T0001848;gene_name=DNM1P48;ID=CHM13_chrY_T0001848;Name=DNM1P48
CHM13_chrY	CAT	exon	24679073	24679298	.	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=CHM13_chrY_T0001848;gene_id=CHM13_chrY_G0000666;Parent=CHM13_chrY_T0001848;transcript_name=CHM13_chrY_T0001848;gene_name=DNM1P48;ID=exon:CHM13_chrY_T0001848:0;Name=DNM1P48;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24679299	24679542	.	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=CHM13_chrY_T0001848;gene_id=CHM13_chrY_G0000666;Parent=CHM13_chrY_T0001848;transcript_name=CHM13_chrY_T0001848;gene_name=DNM1P48;ID=intron:CHM13_chrY_T0001848:0;Name=DNM1P48;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24679543	24679755	.	+	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=CHM13_chrY_T0001848;gene_id=CHM13_chrY_G0000666;Parent=CHM13_chrY_T0001848;transcript_name=CHM13_chrY_T0001848;gene_name=DNM1P48;ID=exon:CHM13_chrY_T0001848:1;Name=DNM1P48;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24679717	24680095	.	-	.	source_gene_common_name=ENSG00000233619;source_gene=ENSG00000233619.1;gene_id=CHM13_chrY_G0000667;gene_biotype=processed_pseudogene;gene_name=ENSG00000233619;gene_sources=liftoff;ID=CHM13_chrY_G0000667;Name=ENSG00000233619
CHM13_chrY	CAT	transcript	24679717	24680095	1000	-	.	source_transcript=ENST00000437571.1;source_transcript_name=ENST00000437571;source_gene=ENSG00000233619.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233619.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000437571.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437571.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000233619;transcript_id=CHM13_chrY_T0001849;gene_id=CHM13_chrY_G0000667;Parent=CHM13_chrY_G0000667;transcript_name=CHM13_chrY_T0001849;gene_name=ENSG00000233619;ID=CHM13_chrY_T0001849;Name=ENSG00000233619
CHM13_chrY	CAT	exon	24679717	24680095	.	-	.	source_transcript=ENST00000437571.1;source_transcript_name=ENST00000437571;source_gene=ENSG00000233619.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233619.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000437571.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437571.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000233619;transcript_id=CHM13_chrY_T0001849;gene_id=CHM13_chrY_G0000667;Parent=CHM13_chrY_T0001849;transcript_name=CHM13_chrY_T0001849;gene_name=ENSG00000233619;ID=exon:CHM13_chrY_T0001849:0;Name=ENSG00000233619;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24685367	24690950	.	-	.	source_gene_common_name=ENSG00000307363;source_gene=ENSG00000307363.1;gene_id=CHM13_chrY_G0000668;gene_biotype=lncRNA;gene_name=ENSG00000307363;gene_sources=liftoff;ID=CHM13_chrY_G0000668;Name=ENSG00000307363
CHM13_chrY	CAT	transcript	24685367	24690777	1000	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001850;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001850;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001850;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24685367	24688220	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001850;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001850;transcript_name=CHM13_chrY_T0001850;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001850:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001850;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001850;transcript_name=CHM13_chrY_T0001850;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001850:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001850;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001850;transcript_name=CHM13_chrY_T0001850;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001850:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689584	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001850;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001850;transcript_name=CHM13_chrY_T0001850;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001850:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689585	24689645	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001850;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001850;transcript_name=CHM13_chrY_T0001850;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001850:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24689912	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001850;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001850;transcript_name=CHM13_chrY_T0001850;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001850:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689913	24690777	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001850;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001850;transcript_name=CHM13_chrY_T0001850;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001850:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24687654	24690520	1000	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001851;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001851;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001851;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24687654	24688220	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001851;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001851;transcript_name=CHM13_chrY_T0001851;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001851:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001851;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001851;transcript_name=CHM13_chrY_T0001851;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001851:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001851;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001851;transcript_name=CHM13_chrY_T0001851;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001851:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689567	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001851;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001851;transcript_name=CHM13_chrY_T0001851;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001851:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689568	24689645	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001851;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001851;transcript_name=CHM13_chrY_T0001851;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001851:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24689912	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001851;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001851;transcript_name=CHM13_chrY_T0001851;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001851:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689913	24690520	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001851;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001851;transcript_name=CHM13_chrY_T0001851;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001851:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688055	24688779	1000	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001852;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001852;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001852;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688055	24688220	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001852;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001852;transcript_name=CHM13_chrY_T0001852;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001852:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001852;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001852;transcript_name=CHM13_chrY_T0001852;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001852:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688779	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001852;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001852;transcript_name=CHM13_chrY_T0001852;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001852:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688056	24690300	1000	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001853;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001853;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001853;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688056	24688220	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001853;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001853;transcript_name=CHM13_chrY_T0001853;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001853:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001853;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001853;transcript_name=CHM13_chrY_T0001853;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001853:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001853;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001853;transcript_name=CHM13_chrY_T0001853;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001853:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689567	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001853;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001853;transcript_name=CHM13_chrY_T0001853;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001853:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689568	24689645	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001853;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001853;transcript_name=CHM13_chrY_T0001853;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001853:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24690183	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001853;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001853;transcript_name=CHM13_chrY_T0001853;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001853:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24690184	24690300	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001853;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001853;transcript_name=CHM13_chrY_T0001853;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001853:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688056	24690266	1000	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001854;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001854;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001854;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688056	24688220	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001854;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001854;transcript_name=CHM13_chrY_T0001854;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001854:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001854;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001854;transcript_name=CHM13_chrY_T0001854;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001854:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001854;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001854;transcript_name=CHM13_chrY_T0001854;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001854:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689584	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001854;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001854;transcript_name=CHM13_chrY_T0001854;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001854:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689585	24689645	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001854;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001854;transcript_name=CHM13_chrY_T0001854;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001854:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24690083	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001854;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001854;transcript_name=CHM13_chrY_T0001854;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001854:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24690084	24690266	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001854;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001854;transcript_name=CHM13_chrY_T0001854;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001854:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688056	24689930	1000	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001855;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001855;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001855;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688056	24688220	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001855;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001855;transcript_name=CHM13_chrY_T0001855;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001855:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001855;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001855;transcript_name=CHM13_chrY_T0001855;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001855:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001855;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001855;transcript_name=CHM13_chrY_T0001855;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001855:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689406	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001855;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001855;transcript_name=CHM13_chrY_T0001855;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001855:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689407	24689645	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001855;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001855;transcript_name=CHM13_chrY_T0001855;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001855:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24689756	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001855;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001855;transcript_name=CHM13_chrY_T0001855;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001855:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689757	24689930	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001855;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001855;transcript_name=CHM13_chrY_T0001855;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001855:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688056	24690147	1000	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001856;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001856;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001856;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688056	24688220	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001856;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001856;transcript_name=CHM13_chrY_T0001856;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001856:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001856;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001856;transcript_name=CHM13_chrY_T0001856;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001856:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001856;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001856;transcript_name=CHM13_chrY_T0001856;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001856:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689406	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001856;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001856;transcript_name=CHM13_chrY_T0001856;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001856:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689407	24689645	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001856;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001856;transcript_name=CHM13_chrY_T0001856;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001856:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24689912	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001856;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001856;transcript_name=CHM13_chrY_T0001856;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001856:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689913	24690147	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001856;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001856;transcript_name=CHM13_chrY_T0001856;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001856:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688056	24690348	1000	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001857;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001857;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001857;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688056	24688220	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001857;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001857;transcript_name=CHM13_chrY_T0001857;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001857:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001857;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001857;transcript_name=CHM13_chrY_T0001857;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001857:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001857;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001857;transcript_name=CHM13_chrY_T0001857;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001857:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689406	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001857;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001857;transcript_name=CHM13_chrY_T0001857;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001857:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689407	24689645	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001857;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001857;transcript_name=CHM13_chrY_T0001857;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001857:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24690183	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001857;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001857;transcript_name=CHM13_chrY_T0001857;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001857:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24690184	24690348	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001857;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001857;transcript_name=CHM13_chrY_T0001857;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001857:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688056	24690936	1000	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001858;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001858;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001858;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688056	24688220	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001858;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001858;transcript_name=CHM13_chrY_T0001858;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001858:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001858;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001858;transcript_name=CHM13_chrY_T0001858;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001858:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001858;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001858;transcript_name=CHM13_chrY_T0001858;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001858:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689584	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001858;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001858;transcript_name=CHM13_chrY_T0001858;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001858:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689585	24689645	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001858;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001858;transcript_name=CHM13_chrY_T0001858;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001858:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24690869	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001858;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001858;transcript_name=CHM13_chrY_T0001858;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001858:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24690870	24690936	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001858;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001858;transcript_name=CHM13_chrY_T0001858;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001858:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688056	24690024	1000	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001859;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001859;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001859;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688056	24688220	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001859;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001859;transcript_name=CHM13_chrY_T0001859;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001859:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001859;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001859;transcript_name=CHM13_chrY_T0001859;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001859:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001859;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001859;transcript_name=CHM13_chrY_T0001859;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001859:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689584	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001859;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001859;transcript_name=CHM13_chrY_T0001859;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001859:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689585	24689645	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001859;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001859;transcript_name=CHM13_chrY_T0001859;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001859:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24689756	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001859;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001859;transcript_name=CHM13_chrY_T0001859;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001859:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689757	24690024	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001859;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001859;transcript_name=CHM13_chrY_T0001859;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001859:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688056	24689930	1000	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001860;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001860;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001860;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688056	24688220	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001860;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001860;transcript_name=CHM13_chrY_T0001860;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001860:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001860;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001860;transcript_name=CHM13_chrY_T0001860;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001860:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001860;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001860;transcript_name=CHM13_chrY_T0001860;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001860:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689567	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001860;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001860;transcript_name=CHM13_chrY_T0001860;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001860:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689568	24689645	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001860;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001860;transcript_name=CHM13_chrY_T0001860;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001860:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24689756	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001860;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001860;transcript_name=CHM13_chrY_T0001860;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001860:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689757	24689930	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001860;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001860;transcript_name=CHM13_chrY_T0001860;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001860:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688056	24690356	1000	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001861;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001861;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001861;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688056	24688220	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001861;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001861;transcript_name=CHM13_chrY_T0001861;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001861:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001861;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001861;transcript_name=CHM13_chrY_T0001861;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001861:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001861;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001861;transcript_name=CHM13_chrY_T0001861;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001861:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689584	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001861;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001861;transcript_name=CHM13_chrY_T0001861;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001861:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689585	24689645	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001861;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001861;transcript_name=CHM13_chrY_T0001861;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001861:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24690183	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001861;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001861;transcript_name=CHM13_chrY_T0001861;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001861:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24690184	24690356	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001861;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001861;transcript_name=CHM13_chrY_T0001861;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001861:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688056	24690266	1000	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001862;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001862;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001862;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688056	24688220	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001862;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001862;transcript_name=CHM13_chrY_T0001862;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001862:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001862;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001862;transcript_name=CHM13_chrY_T0001862;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001862:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001862;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001862;transcript_name=CHM13_chrY_T0001862;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001862:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689567	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001862;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001862;transcript_name=CHM13_chrY_T0001862;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001862:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689568	24689645	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001862;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001862;transcript_name=CHM13_chrY_T0001862;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001862:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24690083	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001862;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001862;transcript_name=CHM13_chrY_T0001862;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001862:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24690084	24690266	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001862;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001862;transcript_name=CHM13_chrY_T0001862;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001862:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688056	24690245	1000	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001863;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001863;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001863;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688056	24688220	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001863;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001863;transcript_name=CHM13_chrY_T0001863;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001863:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001863;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001863;transcript_name=CHM13_chrY_T0001863;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001863:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001863;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001863;transcript_name=CHM13_chrY_T0001863;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001863:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689406	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001863;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001863;transcript_name=CHM13_chrY_T0001863;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001863:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689407	24689645	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001863;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001863;transcript_name=CHM13_chrY_T0001863;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001863:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24690083	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001863;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001863;transcript_name=CHM13_chrY_T0001863;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001863:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24690084	24690245	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001863;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001863;transcript_name=CHM13_chrY_T0001863;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001863:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688056	24690950	1000	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001864;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001864;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001864;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688056	24688220	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001864;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001864;transcript_name=CHM13_chrY_T0001864;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001864:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001864;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001864;transcript_name=CHM13_chrY_T0001864;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001864:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001864;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001864;transcript_name=CHM13_chrY_T0001864;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001864:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689406	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001864;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001864;transcript_name=CHM13_chrY_T0001864;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001864:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689407	24689645	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001864;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001864;transcript_name=CHM13_chrY_T0001864;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001864:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24690869	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001864;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001864;transcript_name=CHM13_chrY_T0001864;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001864:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24690870	24690950	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001864;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001864;transcript_name=CHM13_chrY_T0001864;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001864:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24688057	24690186	1000	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001865;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_G0000668;transcript_name=CHM13_chrY_T0001865;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001865;Name=ENSG00000307363
CHM13_chrY	CAT	exon	24688057	24688220	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001865;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001865;transcript_name=CHM13_chrY_T0001865;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001865:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688221	24688429	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001865;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001865;transcript_name=CHM13_chrY_T0001865;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001865:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688430	24688544	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001865;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001865;transcript_name=CHM13_chrY_T0001865;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001865:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688545	24689406	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001865;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001865;transcript_name=CHM13_chrY_T0001865;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001865:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689407	24689645	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001865;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001865;transcript_name=CHM13_chrY_T0001865;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001865:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24689997	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001865;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001865;transcript_name=CHM13_chrY_T0001865;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001865:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689998	24690186	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001865;gene_id=CHM13_chrY_G0000668;Parent=CHM13_chrY_T0001865;transcript_name=CHM13_chrY_T0001865;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001865:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24688088	24694395	.	-	.	source_gene_common_name=GOLGA6L16P;source_gene=ENSG00000197092.5_1;gene_id=CHM13_chrY_G0000669;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA6L16P;gene_sources=liftoff;ID=CHM13_chrY_G0000669;Name=GOLGA6L16P
CHM13_chrY	CAT	transcript	24688088	24694395	1000	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_G0000669;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=CHM13_chrY_T0001866;Name=GOLGA6L16P
CHM13_chrY	CAT	exon	24688088	24688219	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001866:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688220	24688428	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001866:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24688429	24688552	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001866:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24688553	24689574	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001866:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689575	24689645	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001866:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24689646	24689912	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001866:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24689913	24690482	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001866:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24690483	24690887	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001866:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24690888	24690944	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001866:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24690945	24691600	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001866:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24691601	24691681	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001866:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24691682	24691866	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001866:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24691867	24691926	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001866:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24691927	24692548	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001866:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24692549	24692668	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001866:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24692669	24694311	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001866:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24694312	24694395	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001866;gene_id=CHM13_chrY_G0000669;Parent=CHM13_chrY_T0001866;transcript_name=CHM13_chrY_T0001866;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001866:8;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24704738	24720223	.	-	.	source_gene_common_name=ENSG00000235583;source_gene=ENSG00000235583.2;gene_id=CHM13_chrY_G0000670;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000235583;gene_sources=liftoff;ID=CHM13_chrY_G0000670;Name=ENSG00000235583
CHM13_chrY	CAT	transcript	24704738	24720223	1000	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=CHM13_chrY_T0001867;gene_id=CHM13_chrY_G0000670;Parent=CHM13_chrY_G0000670;transcript_name=CHM13_chrY_T0001867;gene_name=ENSG00000235583;ID=CHM13_chrY_T0001867;Name=ENSG00000235583
CHM13_chrY	CAT	exon	24704738	24704833	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=CHM13_chrY_T0001867;gene_id=CHM13_chrY_G0000670;Parent=CHM13_chrY_T0001867;transcript_name=CHM13_chrY_T0001867;gene_name=ENSG00000235583;ID=exon:CHM13_chrY_T0001867:0;Name=ENSG00000235583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24704834	24705561	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=CHM13_chrY_T0001867;gene_id=CHM13_chrY_G0000670;Parent=CHM13_chrY_T0001867;transcript_name=CHM13_chrY_T0001867;gene_name=ENSG00000235583;ID=intron:CHM13_chrY_T0001867:0;Name=ENSG00000235583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24705562	24705610	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=CHM13_chrY_T0001867;gene_id=CHM13_chrY_G0000670;Parent=CHM13_chrY_T0001867;transcript_name=CHM13_chrY_T0001867;gene_name=ENSG00000235583;ID=exon:CHM13_chrY_T0001867:1;Name=ENSG00000235583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24705611	24712115	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=CHM13_chrY_T0001867;gene_id=CHM13_chrY_G0000670;Parent=CHM13_chrY_T0001867;transcript_name=CHM13_chrY_T0001867;gene_name=ENSG00000235583;ID=intron:CHM13_chrY_T0001867:1;Name=ENSG00000235583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24712116	24712174	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=CHM13_chrY_T0001867;gene_id=CHM13_chrY_G0000670;Parent=CHM13_chrY_T0001867;transcript_name=CHM13_chrY_T0001867;gene_name=ENSG00000235583;ID=exon:CHM13_chrY_T0001867:2;Name=ENSG00000235583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24712175	24716457	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=CHM13_chrY_T0001867;gene_id=CHM13_chrY_G0000670;Parent=CHM13_chrY_T0001867;transcript_name=CHM13_chrY_T0001867;gene_name=ENSG00000235583;ID=intron:CHM13_chrY_T0001867:2;Name=ENSG00000235583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24716458	24716547	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=CHM13_chrY_T0001867;gene_id=CHM13_chrY_G0000670;Parent=CHM13_chrY_T0001867;transcript_name=CHM13_chrY_T0001867;gene_name=ENSG00000235583;ID=exon:CHM13_chrY_T0001867:3;Name=ENSG00000235583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24716548	24717640	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=CHM13_chrY_T0001867;gene_id=CHM13_chrY_G0000670;Parent=CHM13_chrY_T0001867;transcript_name=CHM13_chrY_T0001867;gene_name=ENSG00000235583;ID=intron:CHM13_chrY_T0001867:3;Name=ENSG00000235583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24717641	24717725	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=CHM13_chrY_T0001867;gene_id=CHM13_chrY_G0000670;Parent=CHM13_chrY_T0001867;transcript_name=CHM13_chrY_T0001867;gene_name=ENSG00000235583;ID=exon:CHM13_chrY_T0001867:4;Name=ENSG00000235583;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24717726	24720085	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=CHM13_chrY_T0001867;gene_id=CHM13_chrY_G0000670;Parent=CHM13_chrY_T0001867;transcript_name=CHM13_chrY_T0001867;gene_name=ENSG00000235583;ID=intron:CHM13_chrY_T0001867:4;Name=ENSG00000235583;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24720086	24720223	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=CHM13_chrY_T0001867;gene_id=CHM13_chrY_G0000670;Parent=CHM13_chrY_T0001867;transcript_name=CHM13_chrY_T0001867;gene_name=ENSG00000235583;ID=exon:CHM13_chrY_T0001867:5;Name=ENSG00000235583;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24709800	24725195	.	-	.	source_gene_common_name=ENSG00000304207;source_gene=ENSG00000304207.1;gene_id=CHM13_chrY_G0000671;gene_biotype=lncRNA;gene_name=ENSG00000304207;gene_sources=liftoff;ID=CHM13_chrY_G0000671;Name=ENSG00000304207
CHM13_chrY	CAT	transcript	24709800	24725194	1000	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001868;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_G0000671;transcript_name=CHM13_chrY_T0001868;gene_name=ENSG00000304207;ID=CHM13_chrY_T0001868;Name=ENSG00000304207
CHM13_chrY	CAT	exon	24709800	24710235	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001868;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001868;transcript_name=CHM13_chrY_T0001868;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001868:0;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24710236	24716462	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001868;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001868;transcript_name=CHM13_chrY_T0001868;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001868:0;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24716463	24716547	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001868;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001868;transcript_name=CHM13_chrY_T0001868;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001868:1;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24716548	24717640	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001868;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001868;transcript_name=CHM13_chrY_T0001868;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001868:1;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24717641	24717725	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001868;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001868;transcript_name=CHM13_chrY_T0001868;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001868:2;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24717726	24720101	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001868;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001868;transcript_name=CHM13_chrY_T0001868;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001868:2;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24720102	24720223	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001868;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001868;transcript_name=CHM13_chrY_T0001868;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001868:3;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24720224	24724178	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001868;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001868;transcript_name=CHM13_chrY_T0001868;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001868:3;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24724179	24724341	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001868;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001868;transcript_name=CHM13_chrY_T0001868;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001868:4;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24724342	24725089	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001868;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001868;transcript_name=CHM13_chrY_T0001868;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001868:4;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24725090	24725194	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001868;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001868;transcript_name=CHM13_chrY_T0001868;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001868:5;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24709800	24725187	1000	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001869;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_G0000671;transcript_name=CHM13_chrY_T0001869;gene_name=ENSG00000304207;ID=CHM13_chrY_T0001869;Name=ENSG00000304207
CHM13_chrY	CAT	exon	24709800	24710235	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001869;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001869;transcript_name=CHM13_chrY_T0001869;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001869:0;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24710236	24716462	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001869;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001869;transcript_name=CHM13_chrY_T0001869;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001869:0;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24716463	24716547	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001869;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001869;transcript_name=CHM13_chrY_T0001869;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001869:1;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24716548	24720101	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001869;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001869;transcript_name=CHM13_chrY_T0001869;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001869:1;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24720102	24720223	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001869;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001869;transcript_name=CHM13_chrY_T0001869;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001869:2;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24720224	24724178	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001869;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001869;transcript_name=CHM13_chrY_T0001869;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001869:2;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24724179	24724341	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001869;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001869;transcript_name=CHM13_chrY_T0001869;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001869:3;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24724342	24725089	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001869;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001869;transcript_name=CHM13_chrY_T0001869;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001869:3;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24725090	24725187	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001869;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001869;transcript_name=CHM13_chrY_T0001869;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001869:4;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24709800	24725195	1000	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001870;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_G0000671;transcript_name=CHM13_chrY_T0001870;gene_name=ENSG00000304207;ID=CHM13_chrY_T0001870;Name=ENSG00000304207
CHM13_chrY	CAT	exon	24709800	24710235	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001870;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001870;transcript_name=CHM13_chrY_T0001870;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001870:0;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24710236	24716462	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001870;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001870;transcript_name=CHM13_chrY_T0001870;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001870:0;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24716463	24716547	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001870;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001870;transcript_name=CHM13_chrY_T0001870;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001870:1;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24716548	24720085	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001870;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001870;transcript_name=CHM13_chrY_T0001870;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001870:1;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24720086	24720223	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001870;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001870;transcript_name=CHM13_chrY_T0001870;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001870:2;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24720224	24725089	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001870;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001870;transcript_name=CHM13_chrY_T0001870;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001870:2;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24725090	24725195	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001870;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001870;transcript_name=CHM13_chrY_T0001870;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001870:3;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24709813	24725178	1000	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001871;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_G0000671;transcript_name=CHM13_chrY_T0001871;gene_name=ENSG00000304207;ID=CHM13_chrY_T0001871;Name=ENSG00000304207
CHM13_chrY	CAT	exon	24709813	24710235	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001871;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001871;transcript_name=CHM13_chrY_T0001871;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001871:0;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24710236	24716462	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001871;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001871;transcript_name=CHM13_chrY_T0001871;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001871:0;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24716463	24716547	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001871;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001871;transcript_name=CHM13_chrY_T0001871;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001871:1;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24716548	24717640	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001871;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001871;transcript_name=CHM13_chrY_T0001871;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001871:1;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24717641	24717725	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001871;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001871;transcript_name=CHM13_chrY_T0001871;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001871:2;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24717726	24720085	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001871;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001871;transcript_name=CHM13_chrY_T0001871;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001871:2;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24720086	24720223	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001871;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001871;transcript_name=CHM13_chrY_T0001871;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001871:3;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24720224	24725089	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001871;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001871;transcript_name=CHM13_chrY_T0001871;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001871:3;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24725090	24725178	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001871;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001871;transcript_name=CHM13_chrY_T0001871;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001871:4;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24709813	24725136	1000	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001872;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_G0000671;transcript_name=CHM13_chrY_T0001872;gene_name=ENSG00000304207;ID=CHM13_chrY_T0001872;Name=ENSG00000304207
CHM13_chrY	CAT	exon	24709813	24710235	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001872;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001872;transcript_name=CHM13_chrY_T0001872;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001872:0;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24710236	24716462	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001872;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001872;transcript_name=CHM13_chrY_T0001872;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001872:0;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24716463	24716547	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001872;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001872;transcript_name=CHM13_chrY_T0001872;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001872:1;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24716548	24717640	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001872;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001872;transcript_name=CHM13_chrY_T0001872;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001872:1;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24717641	24717725	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001872;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001872;transcript_name=CHM13_chrY_T0001872;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001872:2;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24717726	24720085	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001872;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001872;transcript_name=CHM13_chrY_T0001872;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001872:2;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24720086	24720223	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001872;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001872;transcript_name=CHM13_chrY_T0001872;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001872:3;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24720224	24724178	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001872;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001872;transcript_name=CHM13_chrY_T0001872;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001872:3;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24724179	24724341	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001872;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001872;transcript_name=CHM13_chrY_T0001872;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001872:4;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24724342	24725089	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001872;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001872;transcript_name=CHM13_chrY_T0001872;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001872:4;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24725090	24725136	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001872;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001872;transcript_name=CHM13_chrY_T0001872;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001872:5;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24710046	24724486	1000	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001873;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_G0000671;transcript_name=CHM13_chrY_T0001873;gene_name=ENSG00000304207;ID=CHM13_chrY_T0001873;Name=ENSG00000304207
CHM13_chrY	CAT	exon	24710046	24710235	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001873;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001873;transcript_name=CHM13_chrY_T0001873;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001873:0;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24710236	24716462	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001873;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001873;transcript_name=CHM13_chrY_T0001873;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001873:0;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24716463	24716547	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001873;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001873;transcript_name=CHM13_chrY_T0001873;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001873:1;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24716548	24717640	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001873;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001873;transcript_name=CHM13_chrY_T0001873;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001873:1;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24717641	24717725	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001873;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001873;transcript_name=CHM13_chrY_T0001873;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001873:2;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24717726	24720101	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001873;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001873;transcript_name=CHM13_chrY_T0001873;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001873:2;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24720102	24720223	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001873;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001873;transcript_name=CHM13_chrY_T0001873;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001873:3;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24720224	24724178	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001873;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001873;transcript_name=CHM13_chrY_T0001873;gene_name=ENSG00000304207;ID=intron:CHM13_chrY_T0001873:3;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24724179	24724486	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=CHM13_chrY_T0001873;gene_id=CHM13_chrY_G0000671;Parent=CHM13_chrY_T0001873;transcript_name=CHM13_chrY_T0001873;gene_name=ENSG00000304207;ID=exon:CHM13_chrY_T0001873:4;Name=ENSG00000304207;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24756546	24758457	.	-	.	source_gene_common_name=CDY19P;source_gene=ENSG00000237823.1;gene_id=CHM13_chrY_G0000672;gene_biotype=unprocessed_pseudogene;gene_name=CDY19P;gene_sources=liftoff;ID=CHM13_chrY_G0000672;Name=CDY19P
CHM13_chrY	CAT	transcript	24756546	24758457	1000	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;transcript_id=CHM13_chrY_T0001874;gene_id=CHM13_chrY_G0000672;Parent=CHM13_chrY_G0000672;transcript_name=CHM13_chrY_T0001874;gene_name=CDY19P;ID=CHM13_chrY_T0001874;Name=CDY19P
CHM13_chrY	CAT	exon	24756546	24757987	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;transcript_id=CHM13_chrY_T0001874;gene_id=CHM13_chrY_G0000672;Parent=CHM13_chrY_T0001874;transcript_name=CHM13_chrY_T0001874;gene_name=CDY19P;ID=exon:CHM13_chrY_T0001874:0;Name=CDY19P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24757988	24758286	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;transcript_id=CHM13_chrY_T0001874;gene_id=CHM13_chrY_G0000672;Parent=CHM13_chrY_T0001874;transcript_name=CHM13_chrY_T0001874;gene_name=CDY19P;ID=intron:CHM13_chrY_T0001874:0;Name=CDY19P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24758287	24758457	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;transcript_id=CHM13_chrY_T0001874;gene_id=CHM13_chrY_G0000672;Parent=CHM13_chrY_T0001874;transcript_name=CHM13_chrY_T0001874;gene_name=CDY19P;ID=exon:CHM13_chrY_T0001874:1;Name=CDY19P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24772214	24780868	.	+	.	source_gene_common_name=USP9YP36;source_gene=ENSG00000229709.1;gene_id=CHM13_chrY_G0000673;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP36;gene_sources=liftoff;ID=CHM13_chrY_G0000673;Name=USP9YP36
CHM13_chrY	CAT	transcript	24772214	24780868	1000	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=CHM13_chrY_T0001875;gene_id=CHM13_chrY_G0000673;Parent=CHM13_chrY_G0000673;transcript_name=CHM13_chrY_T0001875;gene_name=USP9YP36;ID=CHM13_chrY_T0001875;Name=USP9YP36
CHM13_chrY	CAT	exon	24772214	24772419	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=CHM13_chrY_T0001875;gene_id=CHM13_chrY_G0000673;Parent=CHM13_chrY_T0001875;transcript_name=CHM13_chrY_T0001875;gene_name=USP9YP36;ID=exon:CHM13_chrY_T0001875:0;Name=USP9YP36;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24772420	24774582	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=CHM13_chrY_T0001875;gene_id=CHM13_chrY_G0000673;Parent=CHM13_chrY_T0001875;transcript_name=CHM13_chrY_T0001875;gene_name=USP9YP36;ID=intron:CHM13_chrY_T0001875:0;Name=USP9YP36;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24774583	24774806	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=CHM13_chrY_T0001875;gene_id=CHM13_chrY_G0000673;Parent=CHM13_chrY_T0001875;transcript_name=CHM13_chrY_T0001875;gene_name=USP9YP36;ID=exon:CHM13_chrY_T0001875:1;Name=USP9YP36;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24774807	24776610	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=CHM13_chrY_T0001875;gene_id=CHM13_chrY_G0000673;Parent=CHM13_chrY_T0001875;transcript_name=CHM13_chrY_T0001875;gene_name=USP9YP36;ID=intron:CHM13_chrY_T0001875:1;Name=USP9YP36;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24776611	24776789	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=CHM13_chrY_T0001875;gene_id=CHM13_chrY_G0000673;Parent=CHM13_chrY_T0001875;transcript_name=CHM13_chrY_T0001875;gene_name=USP9YP36;ID=exon:CHM13_chrY_T0001875:2;Name=USP9YP36;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24776790	24778601	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=CHM13_chrY_T0001875;gene_id=CHM13_chrY_G0000673;Parent=CHM13_chrY_T0001875;transcript_name=CHM13_chrY_T0001875;gene_name=USP9YP36;ID=intron:CHM13_chrY_T0001875:2;Name=USP9YP36;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24778602	24778691	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=CHM13_chrY_T0001875;gene_id=CHM13_chrY_G0000673;Parent=CHM13_chrY_T0001875;transcript_name=CHM13_chrY_T0001875;gene_name=USP9YP36;ID=exon:CHM13_chrY_T0001875:3;Name=USP9YP36;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24778692	24780738	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=CHM13_chrY_T0001875;gene_id=CHM13_chrY_G0000673;Parent=CHM13_chrY_T0001875;transcript_name=CHM13_chrY_T0001875;gene_name=USP9YP36;ID=intron:CHM13_chrY_T0001875:3;Name=USP9YP36;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24780739	24780868	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=CHM13_chrY_T0001875;gene_id=CHM13_chrY_G0000673;Parent=CHM13_chrY_T0001875;transcript_name=CHM13_chrY_T0001875;gene_name=USP9YP36;ID=exon:CHM13_chrY_T0001875:4;Name=USP9YP36;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24782747	24784769	.	-	.	source_gene_common_name=USP9YP33;source_gene=ENSG00000232064.1;gene_id=CHM13_chrY_G0000674;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP33;gene_sources=liftoff;ID=CHM13_chrY_G0000674;Name=USP9YP33
CHM13_chrY	CAT	transcript	24782747	24784769	1000	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;transcript_id=CHM13_chrY_T0001876;gene_id=CHM13_chrY_G0000674;Parent=CHM13_chrY_G0000674;transcript_name=CHM13_chrY_T0001876;gene_name=USP9YP33;ID=CHM13_chrY_T0001876;Name=USP9YP33
CHM13_chrY	CAT	exon	24782747	24782937	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;transcript_id=CHM13_chrY_T0001876;gene_id=CHM13_chrY_G0000674;Parent=CHM13_chrY_T0001876;transcript_name=CHM13_chrY_T0001876;gene_name=USP9YP33;ID=exon:CHM13_chrY_T0001876:0;Name=USP9YP33;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24782938	24784539	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;transcript_id=CHM13_chrY_T0001876;gene_id=CHM13_chrY_G0000674;Parent=CHM13_chrY_T0001876;transcript_name=CHM13_chrY_T0001876;gene_name=USP9YP33;ID=intron:CHM13_chrY_T0001876:0;Name=USP9YP33;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24784540	24784769	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;transcript_id=CHM13_chrY_T0001876;gene_id=CHM13_chrY_G0000674;Parent=CHM13_chrY_T0001876;transcript_name=CHM13_chrY_T0001876;gene_name=USP9YP33;ID=exon:CHM13_chrY_T0001876:1;Name=USP9YP33;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24811073	24812682	.	+	.	source_gene_common_name=CDY20P;source_gene=ENSG00000225609.1;gene_id=CHM13_chrY_G0000675;gene_biotype=unprocessed_pseudogene;gene_name=CDY20P;gene_sources=liftoff;ID=CHM13_chrY_G0000675;Name=CDY20P
CHM13_chrY	CAT	transcript	24811073	24812682	1000	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;transcript_id=CHM13_chrY_T0001877;gene_id=CHM13_chrY_G0000675;Parent=CHM13_chrY_G0000675;transcript_name=CHM13_chrY_T0001877;gene_name=CDY20P;ID=CHM13_chrY_T0001877;Name=CDY20P
CHM13_chrY	CAT	exon	24811073	24811138	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;transcript_id=CHM13_chrY_T0001877;gene_id=CHM13_chrY_G0000675;Parent=CHM13_chrY_T0001877;transcript_name=CHM13_chrY_T0001877;gene_name=CDY20P;ID=exon:CHM13_chrY_T0001877:0;Name=CDY20P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24811139	24811469	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;transcript_id=CHM13_chrY_T0001877;gene_id=CHM13_chrY_G0000675;Parent=CHM13_chrY_T0001877;transcript_name=CHM13_chrY_T0001877;gene_name=CDY20P;ID=intron:CHM13_chrY_T0001877:0;Name=CDY20P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24811470	24812682	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;transcript_id=CHM13_chrY_T0001877;gene_id=CHM13_chrY_G0000675;Parent=CHM13_chrY_T0001877;transcript_name=CHM13_chrY_T0001877;gene_name=CDY20P;ID=exon:CHM13_chrY_T0001877:1;Name=CDY20P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24814546	24817331	.	+	.	source_gene_common_name=CDY1;source_gene=ENSG00000172288.8;gene_id=CHM13_chrY_G0000676;gene_biotype=protein_coding;gene_name=CDY1;gene_sources=liftoff;ID=CHM13_chrY_G0000676;Name=CDY1
CHM13_chrY	CAT	transcript	24814546	24817331	100	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=CHM13_chrY_T0001878;gene_id=CHM13_chrY_G0000676;Parent=CHM13_chrY_G0000676;transcript_name=CHM13_chrY_T0001878;gene_name=CDY1;ID=CHM13_chrY_T0001878;Name=CDY1
CHM13_chrY	CAT	exon	24814546	24816463	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=CHM13_chrY_T0001878;gene_id=CHM13_chrY_G0000676;Parent=CHM13_chrY_T0001878;transcript_name=CHM13_chrY_T0001878;gene_name=CDY1;ID=exon:CHM13_chrY_T0001878:0;Name=CDY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24814872	24816463	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=CHM13_chrY_T0001878;gene_id=CHM13_chrY_G0000676;Parent=CHM13_chrY_T0001878;transcript_name=CHM13_chrY_T0001878;gene_name=CDY1;ID=CDS:CHM13_chrY_T0001878:0;Name=CDY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	24814872	24814874	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=CHM13_chrY_T0001878;gene_id=CHM13_chrY_G0000676;Parent=CHM13_chrY_T0001878;transcript_name=CHM13_chrY_T0001878;gene_name=CDY1;ID=start_codon:CHM13_chrY_T0001878;Name=CDY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24816464	24816883	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=CHM13_chrY_T0001878;gene_id=CHM13_chrY_G0000676;Parent=CHM13_chrY_T0001878;transcript_name=CHM13_chrY_T0001878;gene_name=CDY1;ID=intron:CHM13_chrY_T0001878:0;Name=CDY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24816884	24817331	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=CHM13_chrY_T0001878;gene_id=CHM13_chrY_G0000676;Parent=CHM13_chrY_T0001878;transcript_name=CHM13_chrY_T0001878;gene_name=CDY1;ID=exon:CHM13_chrY_T0001878:1;Name=CDY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24816884	24816956	.	+	1	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=CHM13_chrY_T0001878;gene_id=CHM13_chrY_G0000676;Parent=CHM13_chrY_T0001878;transcript_name=CHM13_chrY_T0001878;gene_name=CDY1;ID=CDS:CHM13_chrY_T0001878:1;Name=CDY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	24816954	24816956	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=CHM13_chrY_T0001878;gene_id=CHM13_chrY_G0000676;Parent=CHM13_chrY_T0001878;transcript_name=CHM13_chrY_T0001878;gene_name=CDY1;ID=stop_codon:CHM13_chrY_T0001878;Name=CDY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	24814591	24816767	100	+	.	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=CHM13_chrY_T0001879;gene_id=CHM13_chrY_G0000676;Parent=CHM13_chrY_G0000676;transcript_name=CHM13_chrY_T0001879;gene_name=CDY1;ID=CHM13_chrY_T0001879;Name=CDY1
CHM13_chrY	CAT	exon	24814591	24816767	.	+	.	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=CHM13_chrY_T0001879;gene_id=CHM13_chrY_G0000676;Parent=CHM13_chrY_T0001879;transcript_name=CHM13_chrY_T0001879;gene_name=CDY1;ID=exon:CHM13_chrY_T0001879:0;Name=CDY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	24814872	24816494	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=CHM13_chrY_T0001879;gene_id=CHM13_chrY_G0000676;Parent=CHM13_chrY_T0001879;transcript_name=CHM13_chrY_T0001879;gene_name=CDY1;ID=CDS:CHM13_chrY_T0001879:0;Name=CDY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	24814872	24814874	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=CHM13_chrY_T0001879;gene_id=CHM13_chrY_G0000676;Parent=CHM13_chrY_T0001879;transcript_name=CHM13_chrY_T0001879;gene_name=CDY1;ID=start_codon:CHM13_chrY_T0001879;Name=CDY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	24816492	24816494	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=CHM13_chrY_T0001879;gene_id=CHM13_chrY_G0000676;Parent=CHM13_chrY_T0001879;transcript_name=CHM13_chrY_T0001879;gene_name=CDY1;ID=stop_codon:CHM13_chrY_T0001879;Name=CDY1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24855342	24855668	.	+	.	source_gene_common_name=ELOCP10;source_gene=ENSG00000234081.1;alternative_source_transcripts=ENST00000440624.1;gene_id=CHM13_chrY_G0000677;gene_biotype=processed_pseudogene;gene_name=ELOCP10;gene_sources=liftoff;ID=CHM13_chrY_G0000677;Name=ELOCP10
CHM13_chrY	CAT	transcript	24855342	24855668	1000	+	.	source_transcript=ENST00000440624.1;source_transcript_name=ELOCP10-201;source_gene=ENSG00000234081.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234081.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP10;alternative_source_transcripts=ENST00000440624.1;transcript_id=CHM13_chrY_T0001880;gene_id=CHM13_chrY_G0000677;Parent=CHM13_chrY_G0000677;transcript_name=CHM13_chrY_T0001880;gene_name=ELOCP10;ID=CHM13_chrY_T0001880;Name=ELOCP10
CHM13_chrY	CAT	exon	24855342	24855668	.	+	.	source_transcript=ENST00000440624.1;source_transcript_name=ELOCP10-201;source_gene=ENSG00000234081.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234081.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP10;alternative_source_transcripts=ENST00000440624.1;transcript_id=CHM13_chrY_T0001880;gene_id=CHM13_chrY_G0000677;Parent=CHM13_chrY_T0001880;transcript_name=CHM13_chrY_T0001880;gene_name=ELOCP10;ID=exon:CHM13_chrY_T0001880:0;Name=ELOCP10;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24867506	24889798	.	-	.	source_gene_common_name=OFD1P13Y;source_gene=ENSG00000225287.1;gene_id=CHM13_chrY_G0000678;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P13Y;gene_sources=liftoff;ID=CHM13_chrY_G0000678;Name=OFD1P13Y
CHM13_chrY	CAT	transcript	24867506	24889798	1000	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_G0000678;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=CHM13_chrY_T0001881;Name=OFD1P13Y
CHM13_chrY	CAT	exon	24867506	24867654	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=exon:CHM13_chrY_T0001881:0;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24867655	24869268	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=intron:CHM13_chrY_T0001881:0;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24869269	24869360	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=exon:CHM13_chrY_T0001881:1;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24869361	24870465	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=intron:CHM13_chrY_T0001881:1;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24870466	24870539	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=exon:CHM13_chrY_T0001881:2;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24870540	24872315	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=intron:CHM13_chrY_T0001881:2;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24872316	24872432	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=exon:CHM13_chrY_T0001881:3;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24872433	24874537	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=intron:CHM13_chrY_T0001881:3;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24874538	24874643	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=exon:CHM13_chrY_T0001881:4;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24874644	24877687	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=intron:CHM13_chrY_T0001881:4;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24877688	24877823	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=exon:CHM13_chrY_T0001881:5;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24877824	24878162	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=intron:CHM13_chrY_T0001881:5;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24878163	24878295	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=exon:CHM13_chrY_T0001881:6;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24878296	24885772	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=intron:CHM13_chrY_T0001881:6;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24885773	24885831	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=exon:CHM13_chrY_T0001881:7;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24885832	24885916	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=intron:CHM13_chrY_T0001881:7;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24885917	24885985	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=exon:CHM13_chrY_T0001881:8;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24885986	24888193	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=intron:CHM13_chrY_T0001881:8;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24888194	24888392	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=exon:CHM13_chrY_T0001881:9;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24888393	24889700	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=intron:CHM13_chrY_T0001881:9;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24889701	24889798	.	-	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=CHM13_chrY_T0001881;gene_id=CHM13_chrY_G0000678;Parent=CHM13_chrY_T0001881;transcript_name=CHM13_chrY_T0001881;gene_name=OFD1P13Y;ID=exon:CHM13_chrY_T0001881:10;Name=OFD1P13Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24891903	24895014	.	+	.	source_gene_common_name=TRAPPC2P5;source_gene=ENSG00000225256.1;gene_id=CHM13_chrY_G0000679;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P5;gene_sources=liftoff;ID=CHM13_chrY_G0000679;Name=TRAPPC2P5
CHM13_chrY	CAT	transcript	24891903	24895014	1000	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=CHM13_chrY_T0001882;gene_id=CHM13_chrY_G0000679;Parent=CHM13_chrY_G0000679;transcript_name=CHM13_chrY_T0001882;gene_name=TRAPPC2P5;ID=CHM13_chrY_T0001882;Name=TRAPPC2P5
CHM13_chrY	CAT	exon	24891903	24891995	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=CHM13_chrY_T0001882;gene_id=CHM13_chrY_G0000679;Parent=CHM13_chrY_T0001882;transcript_name=CHM13_chrY_T0001882;gene_name=TRAPPC2P5;ID=exon:CHM13_chrY_T0001882:0;Name=TRAPPC2P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24891996	24894358	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=CHM13_chrY_T0001882;gene_id=CHM13_chrY_G0000679;Parent=CHM13_chrY_T0001882;transcript_name=CHM13_chrY_T0001882;gene_name=TRAPPC2P5;ID=intron:CHM13_chrY_T0001882:0;Name=TRAPPC2P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24894359	24894493	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=CHM13_chrY_T0001882;gene_id=CHM13_chrY_G0000679;Parent=CHM13_chrY_T0001882;transcript_name=CHM13_chrY_T0001882;gene_name=TRAPPC2P5;ID=exon:CHM13_chrY_T0001882:1;Name=TRAPPC2P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24894494	24894934	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=CHM13_chrY_T0001882;gene_id=CHM13_chrY_G0000679;Parent=CHM13_chrY_T0001882;transcript_name=CHM13_chrY_T0001882;gene_name=TRAPPC2P5;ID=intron:CHM13_chrY_T0001882:1;Name=TRAPPC2P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24894935	24895014	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=CHM13_chrY_T0001882;gene_id=CHM13_chrY_G0000679;Parent=CHM13_chrY_T0001882;transcript_name=CHM13_chrY_T0001882;gene_name=TRAPPC2P5;ID=exon:CHM13_chrY_T0001882:2;Name=TRAPPC2P5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24902360	24906009	.	-	.	source_gene_common_name=RAB9AP2;source_gene=ENSG00000223856.1;gene_id=CHM13_chrY_G0000680;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP2;gene_sources=liftoff;ID=CHM13_chrY_G0000680;Name=RAB9AP2
CHM13_chrY	CAT	transcript	24902360	24906009	1000	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;transcript_id=CHM13_chrY_T0001883;gene_id=CHM13_chrY_G0000680;Parent=CHM13_chrY_G0000680;transcript_name=CHM13_chrY_T0001883;gene_name=RAB9AP2;ID=CHM13_chrY_T0001883;Name=RAB9AP2
CHM13_chrY	CAT	exon	24902360	24902722	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;transcript_id=CHM13_chrY_T0001883;gene_id=CHM13_chrY_G0000680;Parent=CHM13_chrY_T0001883;transcript_name=CHM13_chrY_T0001883;gene_name=RAB9AP2;ID=exon:CHM13_chrY_T0001883:0;Name=RAB9AP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24902723	24905775	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;transcript_id=CHM13_chrY_T0001883;gene_id=CHM13_chrY_G0000680;Parent=CHM13_chrY_T0001883;transcript_name=CHM13_chrY_T0001883;gene_name=RAB9AP2;ID=intron:CHM13_chrY_T0001883:0;Name=RAB9AP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24905776	24906009	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;transcript_id=CHM13_chrY_T0001883;gene_id=CHM13_chrY_G0000680;Parent=CHM13_chrY_T0001883;transcript_name=CHM13_chrY_T0001883;gene_name=RAB9AP2;ID=exon:CHM13_chrY_T0001883:1;Name=RAB9AP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24915473	24916643	.	+	.	source_gene_common_name=USP9YP30;source_gene=ENSG00000235004.1;gene_id=CHM13_chrY_G0000681;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP30;gene_sources=liftoff;ID=CHM13_chrY_G0000681;Name=USP9YP30
CHM13_chrY	CAT	transcript	24915473	24916643	1000	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;transcript_id=CHM13_chrY_T0001884;gene_id=CHM13_chrY_G0000681;Parent=CHM13_chrY_G0000681;transcript_name=CHM13_chrY_T0001884;gene_name=USP9YP30;ID=CHM13_chrY_T0001884;Name=USP9YP30
CHM13_chrY	CAT	exon	24915473	24915638	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;transcript_id=CHM13_chrY_T0001884;gene_id=CHM13_chrY_G0000681;Parent=CHM13_chrY_T0001884;transcript_name=CHM13_chrY_T0001884;gene_name=USP9YP30;ID=exon:CHM13_chrY_T0001884:0;Name=USP9YP30;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24915639	24915973	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;transcript_id=CHM13_chrY_T0001884;gene_id=CHM13_chrY_G0000681;Parent=CHM13_chrY_T0001884;transcript_name=CHM13_chrY_T0001884;gene_name=USP9YP30;ID=intron:CHM13_chrY_T0001884:0;Name=USP9YP30;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24915974	24916167	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;transcript_id=CHM13_chrY_T0001884;gene_id=CHM13_chrY_G0000681;Parent=CHM13_chrY_T0001884;transcript_name=CHM13_chrY_T0001884;gene_name=USP9YP30;ID=exon:CHM13_chrY_T0001884:1;Name=USP9YP30;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24916168	24916548	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;transcript_id=CHM13_chrY_T0001884;gene_id=CHM13_chrY_G0000681;Parent=CHM13_chrY_T0001884;transcript_name=CHM13_chrY_T0001884;gene_name=USP9YP30;ID=intron:CHM13_chrY_T0001884:1;Name=USP9YP30;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24916549	24916643	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;transcript_id=CHM13_chrY_T0001884;gene_id=CHM13_chrY_G0000681;Parent=CHM13_chrY_T0001884;transcript_name=CHM13_chrY_T0001884;gene_name=USP9YP30;ID=exon:CHM13_chrY_T0001884:2;Name=USP9YP30;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24915799	24915952	.	+	.	source_gene_common_name=RNU1-107P;source_gene=ENSG00000252426.1;alternative_source_transcripts=ENST00000516108.1;gene_id=CHM13_chrY_G0000682;gene_biotype=snRNA;gene_name=RNU1-107P;gene_sources=liftoff;ID=CHM13_chrY_G0000682;Name=RNU1-107P
CHM13_chrY	CAT	transcript	24915799	24915952	1000	+	.	source_transcript=ENST00000516617.1;source_transcript_name=RNU1-107P-201;source_gene=ENSG00000252426.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252426.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-107P;alternative_source_transcripts=ENST00000516108.1;transcript_id=CHM13_chrY_T0001885;gene_id=CHM13_chrY_G0000682;Parent=CHM13_chrY_G0000682;transcript_name=CHM13_chrY_T0001885;gene_name=RNU1-107P;ID=CHM13_chrY_T0001885;Name=RNU1-107P
CHM13_chrY	CAT	exon	24915799	24915952	.	+	.	source_transcript=ENST00000516617.1;source_transcript_name=RNU1-107P-201;source_gene=ENSG00000252426.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252426.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-107P;alternative_source_transcripts=ENST00000516108.1;transcript_id=CHM13_chrY_T0001885;gene_id=CHM13_chrY_G0000682;Parent=CHM13_chrY_T0001885;transcript_name=CHM13_chrY_T0001885;gene_name=RNU1-107P;ID=exon:CHM13_chrY_T0001885:0;Name=RNU1-107P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24920947	24925842	.	+	.	source_gene_common_name=TTTY3;source_gene=ENSG00000231141.1;alternative_source_transcripts=ENST00000631331.1;gene_id=CHM13_chrY_G0000683;gene_biotype=lncRNA;gene_name=TTTY3;gene_sources=liftoff;ID=CHM13_chrY_G0000683;Name=TTTY3
CHM13_chrY	CAT	transcript	24920947	24925842	1000	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000631331.1;transcript_id=CHM13_chrY_T0001886;gene_id=CHM13_chrY_G0000683;Parent=CHM13_chrY_G0000683;transcript_name=CHM13_chrY_T0001886;gene_name=TTTY3;ID=CHM13_chrY_T0001886;Name=TTTY3
CHM13_chrY	CAT	exon	24920947	24921050	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000631331.1;transcript_id=CHM13_chrY_T0001886;gene_id=CHM13_chrY_G0000683;Parent=CHM13_chrY_T0001886;transcript_name=CHM13_chrY_T0001886;gene_name=TTTY3;ID=exon:CHM13_chrY_T0001886:0;Name=TTTY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24921051	24923248	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000631331.1;transcript_id=CHM13_chrY_T0001886;gene_id=CHM13_chrY_G0000683;Parent=CHM13_chrY_T0001886;transcript_name=CHM13_chrY_T0001886;gene_name=TTTY3;ID=intron:CHM13_chrY_T0001886:0;Name=TTTY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24923249	24923383	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000631331.1;transcript_id=CHM13_chrY_T0001886;gene_id=CHM13_chrY_G0000683;Parent=CHM13_chrY_T0001886;transcript_name=CHM13_chrY_T0001886;gene_name=TTTY3;ID=exon:CHM13_chrY_T0001886:1;Name=TTTY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24923384	24925737	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000631331.1;transcript_id=CHM13_chrY_T0001886;gene_id=CHM13_chrY_G0000683;Parent=CHM13_chrY_T0001886;transcript_name=CHM13_chrY_T0001886;gene_name=TTTY3;ID=intron:CHM13_chrY_T0001886:1;Name=TTTY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24925738	24925842	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=ENST00000631331.1;transcript_id=CHM13_chrY_T0001886;gene_id=CHM13_chrY_G0000683;Parent=CHM13_chrY_T0001886;transcript_name=CHM13_chrY_T0001886;gene_name=TTTY3;ID=exon:CHM13_chrY_T0001886:2;Name=TTTY3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24922468	24927614	.	-	.	source_gene_common_name=USP9YP9;source_gene=ENSG00000232614.1;gene_id=CHM13_chrY_G0000684;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP9;gene_sources=liftoff;ID=CHM13_chrY_G0000684;Name=USP9YP9
CHM13_chrY	CAT	transcript	24922468	24927614	1000	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=CHM13_chrY_T0001887;gene_id=CHM13_chrY_G0000684;Parent=CHM13_chrY_G0000684;transcript_name=CHM13_chrY_T0001887;gene_name=USP9YP9;ID=CHM13_chrY_T0001887;Name=USP9YP9
CHM13_chrY	CAT	exon	24922468	24922660	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=CHM13_chrY_T0001887;gene_id=CHM13_chrY_G0000684;Parent=CHM13_chrY_T0001887;transcript_name=CHM13_chrY_T0001887;gene_name=USP9YP9;ID=exon:CHM13_chrY_T0001887:0;Name=USP9YP9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24922661	24924293	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=CHM13_chrY_T0001887;gene_id=CHM13_chrY_G0000684;Parent=CHM13_chrY_T0001887;transcript_name=CHM13_chrY_T0001887;gene_name=USP9YP9;ID=intron:CHM13_chrY_T0001887:0;Name=USP9YP9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24924294	24924556	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=CHM13_chrY_T0001887;gene_id=CHM13_chrY_G0000684;Parent=CHM13_chrY_T0001887;transcript_name=CHM13_chrY_T0001887;gene_name=USP9YP9;ID=exon:CHM13_chrY_T0001887:1;Name=USP9YP9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24924557	24925680	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=CHM13_chrY_T0001887;gene_id=CHM13_chrY_G0000684;Parent=CHM13_chrY_T0001887;transcript_name=CHM13_chrY_T0001887;gene_name=USP9YP9;ID=intron:CHM13_chrY_T0001887:1;Name=USP9YP9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24925681	24925902	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=CHM13_chrY_T0001887;gene_id=CHM13_chrY_G0000684;Parent=CHM13_chrY_T0001887;transcript_name=CHM13_chrY_T0001887;gene_name=USP9YP9;ID=exon:CHM13_chrY_T0001887:2;Name=USP9YP9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24925903	24927577	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=CHM13_chrY_T0001887;gene_id=CHM13_chrY_G0000684;Parent=CHM13_chrY_T0001887;transcript_name=CHM13_chrY_T0001887;gene_name=USP9YP9;ID=intron:CHM13_chrY_T0001887:2;Name=USP9YP9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24927578	24927614	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=CHM13_chrY_T0001887;gene_id=CHM13_chrY_G0000684;Parent=CHM13_chrY_T0001887;transcript_name=CHM13_chrY_T0001887;gene_name=USP9YP9;ID=exon:CHM13_chrY_T0001887:3;Name=USP9YP9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24941050	24942661	.	-	.	source_gene_common_name=USP9YP19;source_gene=ENSG00000225326.1;gene_id=CHM13_chrY_G0000685;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP19;gene_sources=liftoff;ID=CHM13_chrY_G0000685;Name=USP9YP19
CHM13_chrY	CAT	transcript	24941050	24942661	1000	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;transcript_id=CHM13_chrY_T0001888;gene_id=CHM13_chrY_G0000685;Parent=CHM13_chrY_G0000685;transcript_name=CHM13_chrY_T0001888;gene_name=USP9YP19;ID=CHM13_chrY_T0001888;Name=USP9YP19
CHM13_chrY	CAT	exon	24941050	24941316	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;transcript_id=CHM13_chrY_T0001888;gene_id=CHM13_chrY_G0000685;Parent=CHM13_chrY_T0001888;transcript_name=CHM13_chrY_T0001888;gene_name=USP9YP19;ID=exon:CHM13_chrY_T0001888:0;Name=USP9YP19;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	24941317	24942443	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;transcript_id=CHM13_chrY_T0001888;gene_id=CHM13_chrY_G0000685;Parent=CHM13_chrY_T0001888;transcript_name=CHM13_chrY_T0001888;gene_name=USP9YP19;ID=intron:CHM13_chrY_T0001888:0;Name=USP9YP19;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	24942444	24942661	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;transcript_id=CHM13_chrY_T0001888;gene_id=CHM13_chrY_G0000685;Parent=CHM13_chrY_T0001888;transcript_name=CHM13_chrY_T0001888;gene_name=USP9YP19;ID=exon:CHM13_chrY_T0001888:1;Name=USP9YP19;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	24944843	24945325	.	+	.	source_gene_common_name=XKRYP4;source_gene=ENSG00000231026.1;alternative_source_transcripts=ENST00000414395.1;gene_id=CHM13_chrY_G0000686;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP4;gene_sources=liftoff;ID=CHM13_chrY_G0000686;Name=XKRYP4
CHM13_chrY	CAT	transcript	24944843	24945325	1000	+	.	source_transcript=ENST00000414395.1;source_transcript_name=XKRYP4-201;source_gene=ENSG00000231026.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231026.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414395.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414395.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP4;alternative_source_transcripts=ENST00000414395.1;transcript_id=CHM13_chrY_T0001889;gene_id=CHM13_chrY_G0000686;Parent=CHM13_chrY_G0000686;transcript_name=CHM13_chrY_T0001889;gene_name=XKRYP4;ID=CHM13_chrY_T0001889;Name=XKRYP4
CHM13_chrY	CAT	exon	24944843	24945325	.	+	.	source_transcript=ENST00000414395.1;source_transcript_name=XKRYP4-201;source_gene=ENSG00000231026.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231026.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414395.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414395.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP4;alternative_source_transcripts=ENST00000414395.1;transcript_id=CHM13_chrY_T0001889;gene_id=CHM13_chrY_G0000686;Parent=CHM13_chrY_T0001889;transcript_name=CHM13_chrY_T0001889;gene_name=XKRYP4;ID=exon:CHM13_chrY_T0001889:0;Name=XKRYP4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25005472	25007025	.	+	.	source_gene_common_name=CDY22P;source_gene=ENSG00000229343.1;gene_id=CHM13_chrY_G0000687;gene_biotype=unprocessed_pseudogene;gene_name=CDY22P;gene_sources=liftoff;ID=CHM13_chrY_G0000687;Name=CDY22P
CHM13_chrY	CAT	transcript	25005472	25007025	1000	+	.	source_transcript=ENST00000451423.1;source_transcript_name=CDY22P-201;source_gene=ENSG00000229343.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229343.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451423.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY22P;transcript_id=CHM13_chrY_T0001890;gene_id=CHM13_chrY_G0000687;Parent=CHM13_chrY_G0000687;transcript_name=CHM13_chrY_T0001890;gene_name=CDY22P;ID=CHM13_chrY_T0001890;Name=CDY22P
CHM13_chrY	CAT	exon	25005472	25007025	.	+	.	source_transcript=ENST00000451423.1;source_transcript_name=CDY22P-201;source_gene=ENSG00000229343.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229343.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY22P;transcript_id=CHM13_chrY_T0001890;gene_id=CHM13_chrY_G0000687;Parent=CHM13_chrY_T0001890;transcript_name=CHM13_chrY_T0001890;gene_name=CDY22P;ID=exon:CHM13_chrY_T0001890:0;Name=CDY22P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25053405	25053730	.	+	.	source_gene_common_name=ELOCP17;source_gene=ENSG00000232695.1;gene_id=CHM13_chrY_G0000688;gene_biotype=processed_pseudogene;gene_name=ELOCP17;gene_sources=liftoff;ID=CHM13_chrY_G0000688;Name=ELOCP17
CHM13_chrY	CAT	transcript	25053405	25053730	1000	+	.	source_transcript=ENST00000414751.1;source_transcript_name=ELOCP17-201;source_gene=ENSG00000232695.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232695.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414751.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP17;transcript_id=CHM13_chrY_T0001891;gene_id=CHM13_chrY_G0000688;Parent=CHM13_chrY_G0000688;transcript_name=CHM13_chrY_T0001891;gene_name=ELOCP17;ID=CHM13_chrY_T0001891;Name=ELOCP17
CHM13_chrY	CAT	exon	25053405	25053730	.	+	.	source_transcript=ENST00000414751.1;source_transcript_name=ELOCP17-201;source_gene=ENSG00000232695.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232695.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP17;transcript_id=CHM13_chrY_T0001891;gene_id=CHM13_chrY_G0000688;Parent=CHM13_chrY_T0001891;transcript_name=CHM13_chrY_T0001891;gene_name=ELOCP17;ID=exon:CHM13_chrY_T0001891:0;Name=ELOCP17;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25064405	25091143	.	-	.	source_gene_common_name=OFD1P18Y;source_gene=ENSG00000235511.1;gene_id=CHM13_chrY_G0000689;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P18Y;gene_sources=liftoff;ID=CHM13_chrY_G0000689;Name=OFD1P18Y
CHM13_chrY	CAT	transcript	25064405	25091143	1000	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_G0000689;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=CHM13_chrY_T0001892;Name=OFD1P18Y
CHM13_chrY	CAT	exon	25064405	25064476	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=exon:CHM13_chrY_T0001892:0;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25064477	25065578	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=intron:CHM13_chrY_T0001892:0;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25065579	25065652	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=exon:CHM13_chrY_T0001892:1;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25065653	25067438	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=intron:CHM13_chrY_T0001892:1;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25067439	25067557	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=exon:CHM13_chrY_T0001892:2;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25067558	25070204	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=intron:CHM13_chrY_T0001892:2;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25070205	25070310	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=exon:CHM13_chrY_T0001892:3;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25070311	25073356	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=intron:CHM13_chrY_T0001892:3;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25073357	25073504	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=exon:CHM13_chrY_T0001892:4;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25073505	25073848	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=intron:CHM13_chrY_T0001892:4;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25073849	25073983	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=exon:CHM13_chrY_T0001892:5;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25073984	25089620	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=intron:CHM13_chrY_T0001892:5;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25089621	25089826	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=exon:CHM13_chrY_T0001892:6;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25089827	25091044	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=intron:CHM13_chrY_T0001892:6;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25091045	25091143	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=CHM13_chrY_T0001892;gene_id=CHM13_chrY_G0000689;Parent=CHM13_chrY_T0001892;transcript_name=CHM13_chrY_T0001892;gene_name=OFD1P18Y;ID=exon:CHM13_chrY_T0001892:7;Name=OFD1P18Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25097011	25099743	.	+	.	source_gene_common_name=TRAPPC2P4;source_gene=ENSG00000232914.1;gene_id=CHM13_chrY_G0000690;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P4;gene_sources=liftoff;ID=CHM13_chrY_G0000690;Name=TRAPPC2P4
CHM13_chrY	CAT	transcript	25097011	25099743	1000	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=CHM13_chrY_T0001893;gene_id=CHM13_chrY_G0000690;Parent=CHM13_chrY_G0000690;transcript_name=CHM13_chrY_T0001893;gene_name=TRAPPC2P4;ID=CHM13_chrY_T0001893;Name=TRAPPC2P4
CHM13_chrY	CAT	exon	25097011	25097103	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=CHM13_chrY_T0001893;gene_id=CHM13_chrY_G0000690;Parent=CHM13_chrY_T0001893;transcript_name=CHM13_chrY_T0001893;gene_name=TRAPPC2P4;ID=exon:CHM13_chrY_T0001893:0;Name=TRAPPC2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25097104	25099057	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=CHM13_chrY_T0001893;gene_id=CHM13_chrY_G0000690;Parent=CHM13_chrY_T0001893;transcript_name=CHM13_chrY_T0001893;gene_name=TRAPPC2P4;ID=intron:CHM13_chrY_T0001893:0;Name=TRAPPC2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25099058	25099202	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=CHM13_chrY_T0001893;gene_id=CHM13_chrY_G0000690;Parent=CHM13_chrY_T0001893;transcript_name=CHM13_chrY_T0001893;gene_name=TRAPPC2P4;ID=exon:CHM13_chrY_T0001893:1;Name=TRAPPC2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25099203	25099650	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=CHM13_chrY_T0001893;gene_id=CHM13_chrY_G0000690;Parent=CHM13_chrY_T0001893;transcript_name=CHM13_chrY_T0001893;gene_name=TRAPPC2P4;ID=intron:CHM13_chrY_T0001893:1;Name=TRAPPC2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25099651	25099743	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=CHM13_chrY_T0001893;gene_id=CHM13_chrY_G0000690;Parent=CHM13_chrY_T0001893;transcript_name=CHM13_chrY_T0001893;gene_name=TRAPPC2P4;ID=exon:CHM13_chrY_T0001893:2;Name=TRAPPC2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25110816	25111388	.	-	.	source_gene_common_name=RAB9AP3;source_gene=ENSG00000223655.1;alternative_source_transcripts=ENST00000449393.1;gene_id=CHM13_chrY_G0000691;gene_biotype=processed_pseudogene;gene_name=RAB9AP3;gene_sources=liftoff;ID=CHM13_chrY_G0000691;Name=RAB9AP3
CHM13_chrY	CAT	transcript	25110816	25111388	1000	-	.	source_transcript=ENST00000412737.1;source_transcript_name=RAB9AP3-201;source_gene=ENSG00000223655.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223655.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000412737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412737.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP3;alternative_source_transcripts=ENST00000449393.1;transcript_id=CHM13_chrY_T0001894;gene_id=CHM13_chrY_G0000691;Parent=CHM13_chrY_G0000691;transcript_name=CHM13_chrY_T0001894;gene_name=RAB9AP3;ID=CHM13_chrY_T0001894;Name=RAB9AP3
CHM13_chrY	CAT	exon	25110816	25111388	.	-	.	source_transcript=ENST00000412737.1;source_transcript_name=RAB9AP3-201;source_gene=ENSG00000223655.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223655.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000412737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP3;alternative_source_transcripts=ENST00000449393.1;transcript_id=CHM13_chrY_T0001894;gene_id=CHM13_chrY_G0000691;Parent=CHM13_chrY_T0001894;transcript_name=CHM13_chrY_T0001894;gene_name=RAB9AP3;ID=exon:CHM13_chrY_T0001894:0;Name=RAB9AP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25115881	25122322	.	+	.	source_gene_common_name=USP9YP20;source_gene=ENSG00000230854.1;gene_id=CHM13_chrY_G0000692;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP20;gene_sources=liftoff;ID=CHM13_chrY_G0000692;Name=USP9YP20
CHM13_chrY	CAT	transcript	25115881	25122322	1000	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=CHM13_chrY_T0001895;gene_id=CHM13_chrY_G0000692;Parent=CHM13_chrY_G0000692;transcript_name=CHM13_chrY_T0001895;gene_name=USP9YP20;ID=CHM13_chrY_T0001895;Name=USP9YP20
CHM13_chrY	CAT	exon	25115881	25116012	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=CHM13_chrY_T0001895;gene_id=CHM13_chrY_G0000692;Parent=CHM13_chrY_T0001895;transcript_name=CHM13_chrY_T0001895;gene_name=USP9YP20;ID=exon:CHM13_chrY_T0001895:0;Name=USP9YP20;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25116013	25121157	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=CHM13_chrY_T0001895;gene_id=CHM13_chrY_G0000692;Parent=CHM13_chrY_T0001895;transcript_name=CHM13_chrY_T0001895;gene_name=USP9YP20;ID=intron:CHM13_chrY_T0001895:0;Name=USP9YP20;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25121158	25121295	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=CHM13_chrY_T0001895;gene_id=CHM13_chrY_G0000692;Parent=CHM13_chrY_T0001895;transcript_name=CHM13_chrY_T0001895;gene_name=USP9YP20;ID=exon:CHM13_chrY_T0001895:1;Name=USP9YP20;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25121296	25121438	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=CHM13_chrY_T0001895;gene_id=CHM13_chrY_G0000692;Parent=CHM13_chrY_T0001895;transcript_name=CHM13_chrY_T0001895;gene_name=USP9YP20;ID=intron:CHM13_chrY_T0001895:1;Name=USP9YP20;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25121439	25121475	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=CHM13_chrY_T0001895;gene_id=CHM13_chrY_G0000692;Parent=CHM13_chrY_T0001895;transcript_name=CHM13_chrY_T0001895;gene_name=USP9YP20;ID=exon:CHM13_chrY_T0001895:2;Name=USP9YP20;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25121476	25121689	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=CHM13_chrY_T0001895;gene_id=CHM13_chrY_G0000692;Parent=CHM13_chrY_T0001895;transcript_name=CHM13_chrY_T0001895;gene_name=USP9YP20;ID=intron:CHM13_chrY_T0001895:2;Name=USP9YP20;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25121690	25121847	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=CHM13_chrY_T0001895;gene_id=CHM13_chrY_G0000692;Parent=CHM13_chrY_T0001895;transcript_name=CHM13_chrY_T0001895;gene_name=USP9YP20;ID=exon:CHM13_chrY_T0001895:3;Name=USP9YP20;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25121848	25122229	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=CHM13_chrY_T0001895;gene_id=CHM13_chrY_G0000692;Parent=CHM13_chrY_T0001895;transcript_name=CHM13_chrY_T0001895;gene_name=USP9YP20;ID=intron:CHM13_chrY_T0001895:3;Name=USP9YP20;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25122230	25122322	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=CHM13_chrY_T0001895;gene_id=CHM13_chrY_G0000692;Parent=CHM13_chrY_T0001895;transcript_name=CHM13_chrY_T0001895;gene_name=USP9YP20;ID=exon:CHM13_chrY_T0001895:4;Name=USP9YP20;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25121475	25121638	.	+	.	source_gene_common_name=RNU1-40P;source_gene=ENSG00000252625.1;gene_id=CHM13_chrY_G0000693;gene_biotype=snRNA;gene_name=RNU1-40P;gene_sources=liftoff;ID=CHM13_chrY_G0000693;Name=RNU1-40P
CHM13_chrY	CAT	transcript	25121475	25121638	1000	+	.	source_transcript=ENST00000516816.1;source_transcript_name=RNU1-40P-201;source_gene=ENSG00000252625.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252625.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-40P;transcript_id=CHM13_chrY_T0001896;gene_id=CHM13_chrY_G0000693;Parent=CHM13_chrY_G0000693;transcript_name=CHM13_chrY_T0001896;gene_name=RNU1-40P;ID=CHM13_chrY_T0001896;Name=RNU1-40P
CHM13_chrY	CAT	exon	25121475	25121638	.	+	.	source_transcript=ENST00000516816.1;source_transcript_name=RNU1-40P-201;source_gene=ENSG00000252625.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252625.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-40P;transcript_id=CHM13_chrY_T0001896;gene_id=CHM13_chrY_G0000693;Parent=CHM13_chrY_T0001896;transcript_name=CHM13_chrY_T0001896;gene_name=RNU1-40P;ID=exon:CHM13_chrY_T0001896:0;Name=RNU1-40P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25126329	25128377	.	-	.	source_gene_common_name=USP9YP21;source_gene=ENSG00000227635.1;gene_id=CHM13_chrY_G0000694;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP21;gene_sources=liftoff;ID=CHM13_chrY_G0000694;Name=USP9YP21
CHM13_chrY	CAT	transcript	25126329	25128377	1000	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=CHM13_chrY_T0001897;gene_id=CHM13_chrY_G0000694;Parent=CHM13_chrY_G0000694;transcript_name=CHM13_chrY_T0001897;gene_name=USP9YP21;ID=CHM13_chrY_T0001897;Name=USP9YP21
CHM13_chrY	CAT	exon	25126329	25126511	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=CHM13_chrY_T0001897;gene_id=CHM13_chrY_G0000694;Parent=CHM13_chrY_T0001897;transcript_name=CHM13_chrY_T0001897;gene_name=USP9YP21;ID=exon:CHM13_chrY_T0001897:0;Name=USP9YP21;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25126512	25128128	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=CHM13_chrY_T0001897;gene_id=CHM13_chrY_G0000694;Parent=CHM13_chrY_T0001897;transcript_name=CHM13_chrY_T0001897;gene_name=USP9YP21;ID=intron:CHM13_chrY_T0001897:0;Name=USP9YP21;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25128129	25128377	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=CHM13_chrY_T0001897;gene_id=CHM13_chrY_G0000694;Parent=CHM13_chrY_T0001897;transcript_name=CHM13_chrY_T0001897;gene_name=USP9YP21;ID=exon:CHM13_chrY_T0001897:1;Name=USP9YP21;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25135764	25146648	.	+	.	source_gene_common_name=XKRYP6;source_gene=ENSG00000237546.1;alternative_source_transcripts=ENST00000442113.1;gene_id=CHM13_chrY_G0000695;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP6;gene_sources=liftoff;ID=CHM13_chrY_G0000695;Name=XKRYP6
CHM13_chrY	CAT	transcript	25135764	25146648	1000	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000442113.1;transcript_id=CHM13_chrY_T0001898;gene_id=CHM13_chrY_G0000695;Parent=CHM13_chrY_G0000695;transcript_name=CHM13_chrY_T0001898;gene_name=XKRYP6;ID=CHM13_chrY_T0001898;Name=XKRYP6
CHM13_chrY	CAT	exon	25135764	25136099	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000442113.1;transcript_id=CHM13_chrY_T0001898;gene_id=CHM13_chrY_G0000695;Parent=CHM13_chrY_T0001898;transcript_name=CHM13_chrY_T0001898;gene_name=XKRYP6;ID=exon:CHM13_chrY_T0001898:0;Name=XKRYP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25136100	25145868	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000442113.1;transcript_id=CHM13_chrY_T0001898;gene_id=CHM13_chrY_G0000695;Parent=CHM13_chrY_T0001898;transcript_name=CHM13_chrY_T0001898;gene_name=XKRYP6;ID=intron:CHM13_chrY_T0001898:0;Name=XKRYP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25145869	25146648	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000442113.1;transcript_id=CHM13_chrY_T0001898;gene_id=CHM13_chrY_G0000695;Parent=CHM13_chrY_T0001898;transcript_name=CHM13_chrY_T0001898;gene_name=XKRYP6;ID=exon:CHM13_chrY_T0001898:1;Name=XKRYP6;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25183737	25184068	.	-	.	source_gene_common_name=ELOCP11;source_gene=ENSG00000227867.1;alternative_source_transcripts=ENST00000444494.1;gene_id=CHM13_chrY_G0000696;gene_biotype=processed_pseudogene;gene_name=ELOCP11;gene_sources=liftoff;ID=CHM13_chrY_G0000696;Name=ELOCP11
CHM13_chrY	CAT	transcript	25183737	25184068	1000	-	.	source_transcript=ENST00000436690.1;source_transcript_name=ELOCP11-201;source_gene=ENSG00000227867.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227867.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436690.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP11;alternative_source_transcripts=ENST00000444494.1;transcript_id=CHM13_chrY_T0001899;gene_id=CHM13_chrY_G0000696;Parent=CHM13_chrY_G0000696;transcript_name=CHM13_chrY_T0001899;gene_name=ELOCP11;ID=CHM13_chrY_T0001899;Name=ELOCP11
CHM13_chrY	CAT	exon	25183737	25184068	.	-	.	source_transcript=ENST00000436690.1;source_transcript_name=ELOCP11-201;source_gene=ENSG00000227867.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227867.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP11;alternative_source_transcripts=ENST00000444494.1;transcript_id=CHM13_chrY_T0001899;gene_id=CHM13_chrY_G0000696;Parent=CHM13_chrY_T0001899;transcript_name=CHM13_chrY_T0001899;gene_name=ELOCP11;ID=exon:CHM13_chrY_T0001899:0;Name=ELOCP11;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25187180	25188193	.	-	.	source_gene_common_name=CDY23P;source_gene=ENSG00000231716.1;alternative_source_transcripts=ENST00000431260.1;gene_id=CHM13_chrY_G0000697;gene_biotype=unprocessed_pseudogene;gene_name=CDY23P;gene_sources=liftoff;ID=CHM13_chrY_G0000697;Name=CDY23P
CHM13_chrY	CAT	transcript	25187180	25188193	1000	-	.	source_transcript=ENST00000451661.1;source_transcript_name=CDY23P-201;source_gene=ENSG00000231716.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231716.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451661.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY23P;alternative_source_transcripts=ENST00000431260.1;transcript_id=CHM13_chrY_T0001900;gene_id=CHM13_chrY_G0000697;Parent=CHM13_chrY_G0000697;transcript_name=CHM13_chrY_T0001900;gene_name=CDY23P;ID=CHM13_chrY_T0001900;Name=CDY23P
CHM13_chrY	CAT	exon	25187180	25188193	.	-	.	source_transcript=ENST00000451661.1;source_transcript_name=CDY23P-201;source_gene=ENSG00000231716.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231716.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451661.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY23P;alternative_source_transcripts=ENST00000431260.1;transcript_id=CHM13_chrY_T0001900;gene_id=CHM13_chrY_G0000697;Parent=CHM13_chrY_T0001900;transcript_name=CHM13_chrY_T0001900;gene_name=CDY23P;ID=exon:CHM13_chrY_T0001900:0;Name=CDY23P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25194752	25201354	.	+	.	source_gene_common_name=USP9YP26;source_gene=ENSG00000234744.1;gene_id=CHM13_chrY_G0000698;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP26;gene_sources=liftoff;ID=CHM13_chrY_G0000698;Name=USP9YP26
CHM13_chrY	CAT	transcript	25194752	25201354	1000	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=CHM13_chrY_T0001901;gene_id=CHM13_chrY_G0000698;Parent=CHM13_chrY_G0000698;transcript_name=CHM13_chrY_T0001901;gene_name=USP9YP26;ID=CHM13_chrY_T0001901;Name=USP9YP26
CHM13_chrY	CAT	exon	25194752	25194974	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=CHM13_chrY_T0001901;gene_id=CHM13_chrY_G0000698;Parent=CHM13_chrY_T0001901;transcript_name=CHM13_chrY_T0001901;gene_name=USP9YP26;ID=exon:CHM13_chrY_T0001901:0;Name=USP9YP26;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25194975	25196772	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=CHM13_chrY_T0001901;gene_id=CHM13_chrY_G0000698;Parent=CHM13_chrY_T0001901;transcript_name=CHM13_chrY_T0001901;gene_name=USP9YP26;ID=intron:CHM13_chrY_T0001901:0;Name=USP9YP26;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25196773	25196891	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=CHM13_chrY_T0001901;gene_id=CHM13_chrY_G0000698;Parent=CHM13_chrY_T0001901;transcript_name=CHM13_chrY_T0001901;gene_name=USP9YP26;ID=exon:CHM13_chrY_T0001901:1;Name=USP9YP26;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25196892	25198677	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=CHM13_chrY_T0001901;gene_id=CHM13_chrY_G0000698;Parent=CHM13_chrY_T0001901;transcript_name=CHM13_chrY_T0001901;gene_name=USP9YP26;ID=intron:CHM13_chrY_T0001901:1;Name=USP9YP26;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25198678	25198867	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=CHM13_chrY_T0001901;gene_id=CHM13_chrY_G0000698;Parent=CHM13_chrY_T0001901;transcript_name=CHM13_chrY_T0001901;gene_name=USP9YP26;ID=exon:CHM13_chrY_T0001901:2;Name=USP9YP26;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25198868	25201225	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=CHM13_chrY_T0001901;gene_id=CHM13_chrY_G0000698;Parent=CHM13_chrY_T0001901;transcript_name=CHM13_chrY_T0001901;gene_name=USP9YP26;ID=intron:CHM13_chrY_T0001901:2;Name=USP9YP26;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25201226	25201354	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=CHM13_chrY_T0001901;gene_id=CHM13_chrY_G0000698;Parent=CHM13_chrY_T0001901;transcript_name=CHM13_chrY_T0001901;gene_name=USP9YP26;ID=exon:CHM13_chrY_T0001901:3;Name=USP9YP26;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25203933	25204735	.	+	.	source_gene_common_name=HSFY8P;source_gene=ENSG00000233156.1;gene_id=CHM13_chrY_G0000699;gene_biotype=unprocessed_pseudogene;gene_name=HSFY8P;gene_sources=liftoff;ID=CHM13_chrY_G0000699;Name=HSFY8P
CHM13_chrY	CAT	transcript	25203933	25204735	1000	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;transcript_id=CHM13_chrY_T0001902;gene_id=CHM13_chrY_G0000699;Parent=CHM13_chrY_G0000699;transcript_name=CHM13_chrY_T0001902;gene_name=HSFY8P;ID=CHM13_chrY_T0001902;Name=HSFY8P
CHM13_chrY	CAT	exon	25203933	25204091	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;transcript_id=CHM13_chrY_T0001902;gene_id=CHM13_chrY_G0000699;Parent=CHM13_chrY_T0001902;transcript_name=CHM13_chrY_T0001902;gene_name=HSFY8P;ID=exon:CHM13_chrY_T0001902:0;Name=HSFY8P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25204092	25204576	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;transcript_id=CHM13_chrY_T0001902;gene_id=CHM13_chrY_G0000699;Parent=CHM13_chrY_T0001902;transcript_name=CHM13_chrY_T0001902;gene_name=HSFY8P;ID=intron:CHM13_chrY_T0001902:0;Name=HSFY8P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25204577	25204735	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;transcript_id=CHM13_chrY_T0001902;gene_id=CHM13_chrY_G0000699;Parent=CHM13_chrY_T0001902;transcript_name=CHM13_chrY_T0001902;gene_name=HSFY8P;ID=exon:CHM13_chrY_T0001902:1;Name=HSFY8P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25221787	25224953	.	-	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;alternative_source_transcripts=ENST00000729927.1;gene_id=CHM13_chrY_G0000700;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=CHM13_chrY_G0000700;Name=ENSG00000295422
CHM13_chrY	CAT	transcript	25221787	25224953	1000	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=CHM13_chrY_T0001903;gene_id=CHM13_chrY_G0000700;Parent=CHM13_chrY_G0000700;transcript_name=CHM13_chrY_T0001903;gene_name=ENSG00000295422;ID=CHM13_chrY_T0001903;Name=ENSG00000295422
CHM13_chrY	CAT	exon	25221787	25223129	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=CHM13_chrY_T0001903;gene_id=CHM13_chrY_G0000700;Parent=CHM13_chrY_T0001903;transcript_name=CHM13_chrY_T0001903;gene_name=ENSG00000295422;ID=exon:CHM13_chrY_T0001903:0;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25223130	25224664	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=CHM13_chrY_T0001903;gene_id=CHM13_chrY_G0000700;Parent=CHM13_chrY_T0001903;transcript_name=CHM13_chrY_T0001903;gene_name=ENSG00000295422;ID=intron:CHM13_chrY_T0001903:0;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25224665	25224725	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=CHM13_chrY_T0001903;gene_id=CHM13_chrY_G0000700;Parent=CHM13_chrY_T0001903;transcript_name=CHM13_chrY_T0001903;gene_name=ENSG00000295422;ID=exon:CHM13_chrY_T0001903:1;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25224726	25224842	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=CHM13_chrY_T0001903;gene_id=CHM13_chrY_G0000700;Parent=CHM13_chrY_T0001903;transcript_name=CHM13_chrY_T0001903;gene_name=ENSG00000295422;ID=intron:CHM13_chrY_T0001903:1;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25224843	25224953	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1;transcript_id=CHM13_chrY_T0001903;gene_id=CHM13_chrY_G0000700;Parent=CHM13_chrY_T0001903;transcript_name=CHM13_chrY_T0001903;gene_name=ENSG00000295422;ID=exon:CHM13_chrY_T0001903:2;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25248278	25280988	.	-	.	source_gene_common_name=OFD1P15Y;source_gene=ENSG00000234888.1;gene_id=CHM13_chrY_G0000701;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P15Y;gene_sources=liftoff;ID=CHM13_chrY_G0000701;Name=OFD1P15Y
CHM13_chrY	CAT	transcript	25248278	25280988	1000	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_G0000701;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=CHM13_chrY_T0001904;Name=OFD1P15Y
CHM13_chrY	CAT	exon	25248278	25248348	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=exon:CHM13_chrY_T0001904:0;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25248349	25249529	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=intron:CHM13_chrY_T0001904:0;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25249530	25249693	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=exon:CHM13_chrY_T0001904:1;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25249694	25256331	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=intron:CHM13_chrY_T0001904:1;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25256332	25256428	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=exon:CHM13_chrY_T0001904:2;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25256429	25275782	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=intron:CHM13_chrY_T0001904:2;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25275783	25275879	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=exon:CHM13_chrY_T0001904:3;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25275880	25276248	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=intron:CHM13_chrY_T0001904:3;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25276249	25276868	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=exon:CHM13_chrY_T0001904:4;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25276869	25278585	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=intron:CHM13_chrY_T0001904:4;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25278586	25278698	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=exon:CHM13_chrY_T0001904:5;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25278699	25279234	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=intron:CHM13_chrY_T0001904:5;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25279235	25279359	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=exon:CHM13_chrY_T0001904:6;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25279360	25280883	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=intron:CHM13_chrY_T0001904:6;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25280884	25280988	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=CHM13_chrY_T0001904;gene_id=CHM13_chrY_G0000701;Parent=CHM13_chrY_T0001904;transcript_name=CHM13_chrY_T0001904;gene_name=OFD1P15Y;ID=exon:CHM13_chrY_T0001904:7;Name=OFD1P15Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25302497	25307951	.	+	.	source_gene_common_name=ENSG00000299625;source_gene=ENSG00000299625.1;gene_id=CHM13_chrY_G0000702;gene_biotype=lncRNA;gene_name=ENSG00000299625;gene_sources=liftoff;ID=CHM13_chrY_G0000702;Name=ENSG00000299625
CHM13_chrY	CAT	transcript	25302497	25307945	1000	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001905;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_G0000702;transcript_name=CHM13_chrY_T0001905;gene_name=ENSG00000299625;ID=CHM13_chrY_T0001905;Name=ENSG00000299625
CHM13_chrY	CAT	exon	25302497	25302836	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001905;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_T0001905;transcript_name=CHM13_chrY_T0001905;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001905:0;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25302837	25306754	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001905;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_T0001905;transcript_name=CHM13_chrY_T0001905;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001905:0;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25306755	25306881	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001905;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_T0001905;transcript_name=CHM13_chrY_T0001905;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001905:1;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25306882	25307245	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001905;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_T0001905;transcript_name=CHM13_chrY_T0001905;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001905:1;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25307246	25307945	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=CHM13_chrY_T0001905;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_T0001905;transcript_name=CHM13_chrY_T0001905;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001905:2;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	25302498	25307951	1000	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=CHM13_chrY_T0001906;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_G0000702;transcript_name=CHM13_chrY_T0001906;gene_name=ENSG00000299625;ID=CHM13_chrY_T0001906;Name=ENSG00000299625
CHM13_chrY	CAT	exon	25302498	25302836	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=CHM13_chrY_T0001906;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_T0001906;transcript_name=CHM13_chrY_T0001906;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001906:0;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25302837	25304752	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=CHM13_chrY_T0001906;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_T0001906;transcript_name=CHM13_chrY_T0001906;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001906:0;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25304753	25304886	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=CHM13_chrY_T0001906;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_T0001906;transcript_name=CHM13_chrY_T0001906;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001906:1;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25304887	25306754	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=CHM13_chrY_T0001906;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_T0001906;transcript_name=CHM13_chrY_T0001906;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001906:1;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25306755	25306881	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=CHM13_chrY_T0001906;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_T0001906;transcript_name=CHM13_chrY_T0001906;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001906:2;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25306882	25307245	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=CHM13_chrY_T0001906;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_T0001906;transcript_name=CHM13_chrY_T0001906;gene_name=ENSG00000299625;ID=intron:CHM13_chrY_T0001906:2;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25307246	25307951	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=CHM13_chrY_T0001906;gene_id=CHM13_chrY_G0000702;Parent=CHM13_chrY_T0001906;transcript_name=CHM13_chrY_T0001906;gene_name=ENSG00000299625;ID=exon:CHM13_chrY_T0001906:3;Name=ENSG00000299625;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25311725	25313306	.	-	.	source_gene_common_name=ENSG00000237968;source_gene=ENSG00000237968.1;gene_id=CHM13_chrY_G0000703;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000237968;gene_sources=liftoff;ID=CHM13_chrY_G0000703;Name=ENSG00000237968
CHM13_chrY	CAT	transcript	25311725	25313306	1000	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=CHM13_chrY_T0001907;gene_id=CHM13_chrY_G0000703;Parent=CHM13_chrY_G0000703;transcript_name=CHM13_chrY_T0001907;gene_name=ENSG00000237968;ID=CHM13_chrY_T0001907;Name=ENSG00000237968
CHM13_chrY	CAT	exon	25311725	25311800	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=CHM13_chrY_T0001907;gene_id=CHM13_chrY_G0000703;Parent=CHM13_chrY_T0001907;transcript_name=CHM13_chrY_T0001907;gene_name=ENSG00000237968;ID=exon:CHM13_chrY_T0001907:0;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25311801	25311917	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=CHM13_chrY_T0001907;gene_id=CHM13_chrY_G0000703;Parent=CHM13_chrY_T0001907;transcript_name=CHM13_chrY_T0001907;gene_name=ENSG00000237968;ID=intron:CHM13_chrY_T0001907:0;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25311918	25312061	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=CHM13_chrY_T0001907;gene_id=CHM13_chrY_G0000703;Parent=CHM13_chrY_T0001907;transcript_name=CHM13_chrY_T0001907;gene_name=ENSG00000237968;ID=exon:CHM13_chrY_T0001907:1;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25312062	25312148	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=CHM13_chrY_T0001907;gene_id=CHM13_chrY_G0000703;Parent=CHM13_chrY_T0001907;transcript_name=CHM13_chrY_T0001907;gene_name=ENSG00000237968;ID=intron:CHM13_chrY_T0001907:1;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25312149	25312258	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=CHM13_chrY_T0001907;gene_id=CHM13_chrY_G0000703;Parent=CHM13_chrY_T0001907;transcript_name=CHM13_chrY_T0001907;gene_name=ENSG00000237968;ID=exon:CHM13_chrY_T0001907:2;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25312259	25312456	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=CHM13_chrY_T0001907;gene_id=CHM13_chrY_G0000703;Parent=CHM13_chrY_T0001907;transcript_name=CHM13_chrY_T0001907;gene_name=ENSG00000237968;ID=intron:CHM13_chrY_T0001907:2;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25312457	25312495	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=CHM13_chrY_T0001907;gene_id=CHM13_chrY_G0000703;Parent=CHM13_chrY_T0001907;transcript_name=CHM13_chrY_T0001907;gene_name=ENSG00000237968;ID=exon:CHM13_chrY_T0001907:3;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25312496	25312974	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=CHM13_chrY_T0001907;gene_id=CHM13_chrY_G0000703;Parent=CHM13_chrY_T0001907;transcript_name=CHM13_chrY_T0001907;gene_name=ENSG00000237968;ID=intron:CHM13_chrY_T0001907:3;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25312975	25313306	.	-	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;transcript_id=CHM13_chrY_T0001907;gene_id=CHM13_chrY_G0000703;Parent=CHM13_chrY_T0001907;transcript_name=CHM13_chrY_T0001907;gene_name=ENSG00000237968;ID=exon:CHM13_chrY_T0001907:4;Name=ENSG00000237968;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25314152	25328283	.	+	.	source_gene_common_name=ENSG00000293280;source_gene=ENSG00000293280.2;gene_id=CHM13_chrY_G0000704;gene_biotype=lncRNA;gene_name=ENSG00000293280;gene_sources=liftoff;ID=CHM13_chrY_G0000704;Name=ENSG00000293280
CHM13_chrY	CAT	transcript	25314152	25322645	1000	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_G0000704;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=CHM13_chrY_T0001908;Name=ENSG00000293280
CHM13_chrY	CAT	exon	25314152	25314315	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001908;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001908:0;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25314316	25315069	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001908;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=intron:CHM13_chrY_T0001908:0;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25315070	25315149	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001908;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001908:1;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25315150	25316163	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001908;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=intron:CHM13_chrY_T0001908:1;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25316164	25316276	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001908;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001908:2;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25316277	25316729	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001908;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=intron:CHM13_chrY_T0001908:2;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25316730	25316833	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001908;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001908:3;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25316834	25319541	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001908;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=intron:CHM13_chrY_T0001908:3;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25319542	25319719	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001908;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001908:4;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25319720	25321654	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001908;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=intron:CHM13_chrY_T0001908:4;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25321655	25321807	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001908;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001908:5;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25321808	25322385	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001908;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=intron:CHM13_chrY_T0001908:5;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25322386	25322645	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001908;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001908;transcript_name=CHM13_chrY_T0001908;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001908:6;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	25314162	25328283	1000	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_G0000704;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=CHM13_chrY_T0001909;Name=ENSG00000293280
CHM13_chrY	CAT	exon	25314162	25314315	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001909:0;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25314316	25315069	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=intron:CHM13_chrY_T0001909:0;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25315070	25315149	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001909:1;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25315150	25316163	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=intron:CHM13_chrY_T0001909:1;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25316164	25316276	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001909:2;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25316277	25316729	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=intron:CHM13_chrY_T0001909:2;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25316730	25316833	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001909:3;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25316834	25319541	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=intron:CHM13_chrY_T0001909:3;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25319542	25319719	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001909:4;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25319720	25321654	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=intron:CHM13_chrY_T0001909:4;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25321655	25321807	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001909:5;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25321808	25323814	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=intron:CHM13_chrY_T0001909:5;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25323815	25323929	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001909:6;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25323930	25327861	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=intron:CHM13_chrY_T0001909:6;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25327862	25328283	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=CHM13_chrY_T0001909;gene_id=CHM13_chrY_G0000704;Parent=CHM13_chrY_T0001909;transcript_name=CHM13_chrY_T0001909;gene_name=ENSG00000293280;ID=exon:CHM13_chrY_T0001909:7;Name=ENSG00000293280;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25316168	25325802	.	+	.	source_gene_common_name=RBMY2DP;source_gene=ENSG00000215507.11;gene_id=CHM13_chrY_G0000705;gene_biotype=transcribed_processed_pseudogene;gene_name=RBMY2DP;gene_sources=liftoff;ID=CHM13_chrY_G0000705;Name=RBMY2DP
CHM13_chrY	CAT	transcript	25316168	25325802	1000	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_G0000705;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=CHM13_chrY_T0001910;Name=RBMY2DP
CHM13_chrY	CAT	exon	25316168	25316276	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=exon:CHM13_chrY_T0001910:0;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25316277	25316729	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=intron:CHM13_chrY_T0001910:0;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25316730	25316833	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=exon:CHM13_chrY_T0001910:1;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25316834	25319541	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=intron:CHM13_chrY_T0001910:1;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25319542	25319719	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=exon:CHM13_chrY_T0001910:2;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25319720	25321654	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=intron:CHM13_chrY_T0001910:2;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25321655	25321807	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=exon:CHM13_chrY_T0001910:3;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25321808	25323814	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=intron:CHM13_chrY_T0001910:3;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25323815	25323929	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=exon:CHM13_chrY_T0001910:4;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25323930	25324798	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=intron:CHM13_chrY_T0001910:4;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25324799	25324909	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=exon:CHM13_chrY_T0001910:5;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25324910	25324991	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=intron:CHM13_chrY_T0001910:5;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25324992	25325079	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=exon:CHM13_chrY_T0001910:6;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25325080	25325503	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=intron:CHM13_chrY_T0001910:6;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25325504	25325802	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=CHM13_chrY_T0001910;gene_id=CHM13_chrY_G0000705;Parent=CHM13_chrY_T0001910;transcript_name=CHM13_chrY_T0001910;gene_name=RBMY2DP;ID=exon:CHM13_chrY_T0001910:7;Name=RBMY2DP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25337545	25339788	.	-	.	source_gene_common_name=ENSG00000224917;source_gene=ENSG00000224917.1;gene_id=CHM13_chrY_G0000706;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000224917;gene_sources=liftoff;ID=CHM13_chrY_G0000706;Name=ENSG00000224917
CHM13_chrY	CAT	transcript	25337545	25339788	1000	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=CHM13_chrY_T0001911;gene_id=CHM13_chrY_G0000706;Parent=CHM13_chrY_G0000706;transcript_name=CHM13_chrY_T0001911;gene_name=ENSG00000224917;ID=CHM13_chrY_T0001911;Name=ENSG00000224917
CHM13_chrY	CAT	exon	25337545	25337618	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=CHM13_chrY_T0001911;gene_id=CHM13_chrY_G0000706;Parent=CHM13_chrY_T0001911;transcript_name=CHM13_chrY_T0001911;gene_name=ENSG00000224917;ID=exon:CHM13_chrY_T0001911:0;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25337619	25337739	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=CHM13_chrY_T0001911;gene_id=CHM13_chrY_G0000706;Parent=CHM13_chrY_T0001911;transcript_name=CHM13_chrY_T0001911;gene_name=ENSG00000224917;ID=intron:CHM13_chrY_T0001911:0;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25337740	25337799	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=CHM13_chrY_T0001911;gene_id=CHM13_chrY_G0000706;Parent=CHM13_chrY_T0001911;transcript_name=CHM13_chrY_T0001911;gene_name=ENSG00000224917;ID=exon:CHM13_chrY_T0001911:1;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25337800	25337975	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=CHM13_chrY_T0001911;gene_id=CHM13_chrY_G0000706;Parent=CHM13_chrY_T0001911;transcript_name=CHM13_chrY_T0001911;gene_name=ENSG00000224917;ID=intron:CHM13_chrY_T0001911:1;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25337976	25338084	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=CHM13_chrY_T0001911;gene_id=CHM13_chrY_G0000706;Parent=CHM13_chrY_T0001911;transcript_name=CHM13_chrY_T0001911;gene_name=ENSG00000224917;ID=exon:CHM13_chrY_T0001911:2;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25338085	25338299	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=CHM13_chrY_T0001911;gene_id=CHM13_chrY_G0000706;Parent=CHM13_chrY_T0001911;transcript_name=CHM13_chrY_T0001911;gene_name=ENSG00000224917;ID=intron:CHM13_chrY_T0001911:2;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25338300	25338354	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=CHM13_chrY_T0001911;gene_id=CHM13_chrY_G0000706;Parent=CHM13_chrY_T0001911;transcript_name=CHM13_chrY_T0001911;gene_name=ENSG00000224917;ID=exon:CHM13_chrY_T0001911:3;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25338355	25339386	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=CHM13_chrY_T0001911;gene_id=CHM13_chrY_G0000706;Parent=CHM13_chrY_T0001911;transcript_name=CHM13_chrY_T0001911;gene_name=ENSG00000224917;ID=intron:CHM13_chrY_T0001911:3;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25339387	25339788	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=CHM13_chrY_T0001911;gene_id=CHM13_chrY_G0000706;Parent=CHM13_chrY_T0001911;transcript_name=CHM13_chrY_T0001911;gene_name=ENSG00000224917;ID=exon:CHM13_chrY_T0001911:4;Name=ENSG00000224917;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25390819	25400635	.	-	.	source_gene_common_name=REREP2Y;source_gene=ENSG00000235014.1;gene_id=CHM13_chrY_G0000707;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=REREP2Y;gene_sources=liftoff;ID=CHM13_chrY_G0000707;Name=REREP2Y
CHM13_chrY	CAT	transcript	25390819	25400635	1000	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=CHM13_chrY_T0001912;gene_id=CHM13_chrY_G0000707;Parent=CHM13_chrY_G0000707;transcript_name=CHM13_chrY_T0001912;gene_name=REREP2Y;ID=CHM13_chrY_T0001912;Name=REREP2Y
CHM13_chrY	CAT	exon	25390819	25390945	.	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=CHM13_chrY_T0001912;gene_id=CHM13_chrY_G0000707;Parent=CHM13_chrY_T0001912;transcript_name=CHM13_chrY_T0001912;gene_name=REREP2Y;ID=exon:CHM13_chrY_T0001912:0;Name=REREP2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25390946	25400562	.	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=CHM13_chrY_T0001912;gene_id=CHM13_chrY_G0000707;Parent=CHM13_chrY_T0001912;transcript_name=CHM13_chrY_T0001912;gene_name=REREP2Y;ID=intron:CHM13_chrY_T0001912:0;Name=REREP2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25400563	25400635	.	-	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=CHM13_chrY_T0001912;gene_id=CHM13_chrY_G0000707;Parent=CHM13_chrY_T0001912;transcript_name=CHM13_chrY_T0001912;gene_name=REREP2Y;ID=exon:CHM13_chrY_T0001912:1;Name=REREP2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25427093	25427194	.	-	.	source_gene_common_name=ENSG00000286744;source_gene=ENSG00000286744.1;alternative_source_transcripts=ENST00000662956.1;gene_id=CHM13_chrY_G0000708;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000286744;gene_sources=liftoff;ID=CHM13_chrY_G0000708;Name=ENSG00000286744
CHM13_chrY	CAT	transcript	25427093	25427194	1000	-	.	source_transcript=ENST00000662956.1;source_transcript_name=ENST00000662956;source_gene=ENSG00000286744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000286744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000662956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662956.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286744;alternative_source_transcripts=ENST00000662956.1;transcript_id=CHM13_chrY_T0001913;gene_id=CHM13_chrY_G0000708;Parent=CHM13_chrY_G0000708;transcript_name=CHM13_chrY_T0001913;gene_name=ENSG00000286744;ID=CHM13_chrY_T0001913;Name=ENSG00000286744
CHM13_chrY	CAT	exon	25427093	25427194	.	-	.	source_transcript=ENST00000662956.1;source_transcript_name=ENST00000662956;source_gene=ENSG00000286744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000286744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000662956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286744;alternative_source_transcripts=ENST00000662956.1;transcript_id=CHM13_chrY_T0001913;gene_id=CHM13_chrY_G0000708;Parent=CHM13_chrY_T0001913;transcript_name=CHM13_chrY_T0001913;gene_name=ENSG00000286744;ID=exon:CHM13_chrY_T0001913:0;Name=ENSG00000286744;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25436828	25437050	.	-	.	source_gene_common_name=ENSG00000225876;source_gene=ENSG00000225876.1;gene_id=CHM13_chrY_G0000709;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000225876;gene_sources=liftoff;ID=CHM13_chrY_G0000709;Name=ENSG00000225876
CHM13_chrY	CAT	transcript	25436828	25437050	1000	-	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;transcript_id=CHM13_chrY_T0001914;gene_id=CHM13_chrY_G0000709;Parent=CHM13_chrY_G0000709;transcript_name=CHM13_chrY_T0001914;gene_name=ENSG00000225876;ID=CHM13_chrY_T0001914;Name=ENSG00000225876
CHM13_chrY	CAT	exon	25436828	25437050	.	-	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;transcript_id=CHM13_chrY_T0001914;gene_id=CHM13_chrY_G0000709;Parent=CHM13_chrY_T0001914;transcript_name=CHM13_chrY_T0001914;gene_name=ENSG00000225876;ID=exon:CHM13_chrY_T0001914:0;Name=ENSG00000225876;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25439861	25439998	.	+	.	source_gene_common_name=SNORA70;source_gene=ENSG00000251925.1;alternative_source_transcripts=ENST00000516116.1;gene_id=CHM13_chrY_G0000710;gene_biotype=snoRNA;gene_name=SNORA70;gene_sources=liftoff;ID=CHM13_chrY_G0000710;Name=SNORA70
CHM13_chrY	CAT	transcript	25439861	25439998	1000	+	.	source_transcript=ENST00000516116.1;source_transcript_name=SNORA70.13-201;source_gene=ENSG00000251925.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251925.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516116.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000516116.1;transcript_id=CHM13_chrY_T0001915;gene_id=CHM13_chrY_G0000710;Parent=CHM13_chrY_G0000710;transcript_name=CHM13_chrY_T0001915;gene_name=SNORA70;ID=CHM13_chrY_T0001915;Name=SNORA70
CHM13_chrY	CAT	exon	25439861	25439998	.	+	.	source_transcript=ENST00000516116.1;source_transcript_name=SNORA70.13-201;source_gene=ENSG00000251925.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251925.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516116.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000516116.1;transcript_id=CHM13_chrY_T0001915;gene_id=CHM13_chrY_G0000710;Parent=CHM13_chrY_T0001915;transcript_name=CHM13_chrY_T0001915;gene_name=SNORA70;ID=exon:CHM13_chrY_T0001915:0;Name=SNORA70;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25470399	25483612	.	-	.	source_gene_common_name=PPP1R12BP2;source_gene=ENSG00000205936.3;gene_id=CHM13_chrY_G0000711;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=PPP1R12BP2;gene_sources=liftoff;ID=CHM13_chrY_G0000711;Name=PPP1R12BP2
CHM13_chrY	CAT	transcript	25470399	25483612	1000	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=CHM13_chrY_T0001916;gene_id=CHM13_chrY_G0000711;Parent=CHM13_chrY_G0000711;transcript_name=CHM13_chrY_T0001916;gene_name=PPP1R12BP2;ID=CHM13_chrY_T0001916;Name=PPP1R12BP2
CHM13_chrY	CAT	exon	25470399	25470440	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=CHM13_chrY_T0001916;gene_id=CHM13_chrY_G0000711;Parent=CHM13_chrY_T0001916;transcript_name=CHM13_chrY_T0001916;gene_name=PPP1R12BP2;ID=exon:CHM13_chrY_T0001916:0;Name=PPP1R12BP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25470441	25471540	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=CHM13_chrY_T0001916;gene_id=CHM13_chrY_G0000711;Parent=CHM13_chrY_T0001916;transcript_name=CHM13_chrY_T0001916;gene_name=PPP1R12BP2;ID=intron:CHM13_chrY_T0001916:0;Name=PPP1R12BP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25471541	25471653	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=CHM13_chrY_T0001916;gene_id=CHM13_chrY_G0000711;Parent=CHM13_chrY_T0001916;transcript_name=CHM13_chrY_T0001916;gene_name=PPP1R12BP2;ID=exon:CHM13_chrY_T0001916:1;Name=PPP1R12BP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25471654	25471741	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=CHM13_chrY_T0001916;gene_id=CHM13_chrY_G0000711;Parent=CHM13_chrY_T0001916;transcript_name=CHM13_chrY_T0001916;gene_name=PPP1R12BP2;ID=intron:CHM13_chrY_T0001916:1;Name=PPP1R12BP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25471742	25471931	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=CHM13_chrY_T0001916;gene_id=CHM13_chrY_G0000711;Parent=CHM13_chrY_T0001916;transcript_name=CHM13_chrY_T0001916;gene_name=PPP1R12BP2;ID=exon:CHM13_chrY_T0001916:2;Name=PPP1R12BP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25471932	25473901	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=CHM13_chrY_T0001916;gene_id=CHM13_chrY_G0000711;Parent=CHM13_chrY_T0001916;transcript_name=CHM13_chrY_T0001916;gene_name=PPP1R12BP2;ID=intron:CHM13_chrY_T0001916:2;Name=PPP1R12BP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25473902	25474105	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=CHM13_chrY_T0001916;gene_id=CHM13_chrY_G0000711;Parent=CHM13_chrY_T0001916;transcript_name=CHM13_chrY_T0001916;gene_name=PPP1R12BP2;ID=exon:CHM13_chrY_T0001916:3;Name=PPP1R12BP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25474106	25483522	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=CHM13_chrY_T0001916;gene_id=CHM13_chrY_G0000711;Parent=CHM13_chrY_T0001916;transcript_name=CHM13_chrY_T0001916;gene_name=PPP1R12BP2;ID=intron:CHM13_chrY_T0001916:3;Name=PPP1R12BP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25483523	25483612	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=CHM13_chrY_T0001916;gene_id=CHM13_chrY_G0000711;Parent=CHM13_chrY_T0001916;transcript_name=CHM13_chrY_T0001916;gene_name=PPP1R12BP2;ID=exon:CHM13_chrY_T0001916:4;Name=PPP1R12BP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25571713	25641374	.	-	.	source_gene_common_name=DAZ1;source_gene=ENSG00000188120.16;gene_id=CHM13_chrY_G0000712;gene_biotype=protein_coding;gene_name=DAZ1;gene_sources=liftoff;ID=CHM13_chrY_G0000712;Name=DAZ1
CHM13_chrY	CAT	transcript	25571713	25641372	100	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_G0000712;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CHM13_chrY_T0001917;Name=DAZ1
CHM13_chrY	CAT	exon	25571713	25573569	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:0;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25573570	25577532	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:0;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25577533	25577631	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:1;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25577568	25577631	.	-	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:0;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	25577568	25577570	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=stop_codon:CHM13_chrY_T0001917;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25577632	25582204	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:1;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25582205	25582239	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:2;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25582205	25582239	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:1;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25582240	25582983	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:2;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25582984	25583055	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:3;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25582984	25583055	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:2;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25583056	25585368	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:3;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25585369	25585440	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:4;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25585369	25585440	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:3;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25585441	25595154	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:4;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25595155	25595226	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:5;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25595155	25595226	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:4;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25595227	25597531	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:5;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25597532	25597603	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:6;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25597532	25597603	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:5;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25597604	25599927	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:6;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25599928	25599999	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:7;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25599928	25599999	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:6;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25600000	25602313	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:7;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25602314	25602385	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:8;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25602314	25602385	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:7;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25602386	25604709	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:8;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25604710	25604781	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:9;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25604710	25604781	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:8;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25604782	25607101	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:9;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25607102	25607173	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:10;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25607102	25607173	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:9;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25607174	25609546	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:10;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25609547	25609618	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:11;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25609547	25609618	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:10;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25609619	25611018	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:11;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25611019	25611158	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:12;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25611019	25611158	.	-	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:11;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25611159	25611247	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:12;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25611248	25611311	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:13;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25611248	25611311	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:12;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25611312	25611747	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:13;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25611748	25611799	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:14;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25611748	25611799	.	-	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:13;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25611800	25612359	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:14;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25612360	25612451	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:15;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25612360	25612451	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:14;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25612452	25612725	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:15;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25612726	25612872	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:16;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25612726	25612872	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:15;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25612873	25621859	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:16;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25621860	25621999	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:17;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25621860	25621999	.	-	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:16;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25622000	25622088	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:17;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25622089	25622152	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:18;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25622089	25622152	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:17;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25622153	25622588	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:18;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25622589	25622640	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:19;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25622589	25622640	.	-	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:18;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25622641	25623200	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:19;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25623201	25623292	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:20;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25623201	25623292	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:19;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25623293	25623566	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:20;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25623567	25623713	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:21;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25623567	25623713	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:20;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25623714	25632707	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:21;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25632708	25632847	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:22;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25632708	25632847	.	-	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:21;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25632848	25632936	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:22;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25632937	25633000	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:23;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25632937	25633000	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:22;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25633001	25633436	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:23;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25633437	25633488	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:24;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25633437	25633488	.	-	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:23;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25633489	25634048	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:24;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25634049	25634140	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:25;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25634049	25634140	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:24;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25634141	25634414	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:25;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25634415	25634561	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:26;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25634415	25634561	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:25;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25634562	25641161	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001917:26;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25641162	25641372	.	-	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001917:27;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25641162	25641164	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001917:26;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	25641162	25641164	.	-	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001917;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001917;transcript_name=CHM13_chrY_T0001917;gene_name=DAZ1;ID=start_codon:CHM13_chrY_T0001917;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	25571720	25641374	100	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_G0000712;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CHM13_chrY_T0001918;Name=DAZ1
CHM13_chrY	CAT	exon	25571720	25573569	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:0;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25573570	25577532	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:0;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25577533	25577631	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:1;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25577568	25577631	.	-	1	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:0;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	25577568	25577570	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=stop_codon:CHM13_chrY_T0001918;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25577632	25582204	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:1;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25582205	25582239	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:2;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25582205	25582239	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:1;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25582240	25582983	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:2;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25582984	25583055	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:3;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25582984	25583055	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:2;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25583056	25595154	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:3;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25595155	25595226	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:4;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25595155	25595226	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:3;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25595227	25597531	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:4;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25597532	25597603	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:5;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25597532	25597603	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:4;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25597604	25599927	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:5;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25599928	25599999	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:6;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25599928	25599999	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:5;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25600000	25602313	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:6;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25602314	25602385	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:7;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25602314	25602385	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:6;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25602386	25604709	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:7;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25604710	25604781	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:8;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25604710	25604781	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:7;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25604782	25607101	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:8;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25607102	25607173	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:9;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25607102	25607173	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:8;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25607174	25609546	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:9;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25609547	25609618	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:10;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25609547	25609618	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:9;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25609619	25632707	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:10;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25632708	25632847	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:11;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25632708	25632847	.	-	2	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:10;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25632848	25632936	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:11;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25632937	25633000	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:12;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25632937	25633000	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:11;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25633001	25633436	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:12;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25633437	25633488	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:13;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25633437	25633488	.	-	1	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:12;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25633489	25634048	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:13;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25634049	25634140	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:14;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25634049	25634140	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:13;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25634141	25634414	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:14;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25634415	25634561	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:15;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25634415	25634561	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:14;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25634562	25641161	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001918:15;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25641162	25641374	.	-	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001918:16;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25641162	25641164	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001918:15;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	25641162	25641164	.	-	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001918;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001918;transcript_name=CHM13_chrY_T0001918;gene_name=DAZ1;ID=start_codon:CHM13_chrY_T0001918;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	25571721	25583170	1000	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001919;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_G0000712;transcript_name=CHM13_chrY_T0001919;gene_name=DAZ1;ID=CHM13_chrY_T0001919;Name=DAZ1
CHM13_chrY	CAT	exon	25571721	25573569	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001919;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001919;transcript_name=CHM13_chrY_T0001919;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001919:0;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25573570	25577532	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001919;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001919;transcript_name=CHM13_chrY_T0001919;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001919:0;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25577533	25577631	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001919;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001919;transcript_name=CHM13_chrY_T0001919;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001919:1;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25577632	25580567	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001919;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001919;transcript_name=CHM13_chrY_T0001919;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001919:1;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25580568	25580639	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001919;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001919;transcript_name=CHM13_chrY_T0001919;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001919:2;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25580640	25582204	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001919;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001919;transcript_name=CHM13_chrY_T0001919;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001919:2;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25582205	25582239	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001919;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001919;transcript_name=CHM13_chrY_T0001919;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001919:3;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25582240	25582983	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001919;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001919;transcript_name=CHM13_chrY_T0001919;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001919:3;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25582984	25583170	.	-	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001919;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001919;transcript_name=CHM13_chrY_T0001919;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001919:4;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	25573068	25641372	100	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_G0000712;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CHM13_chrY_T0001920;Name=DAZ1
CHM13_chrY	CAT	exon	25573068	25573569	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:0;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25573570	25577532	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:0;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25577533	25577631	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:1;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25577568	25577631	.	-	1	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:0;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	25577568	25577570	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=stop_codon:CHM13_chrY_T0001920;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25577632	25582204	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:1;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25582205	25582239	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:2;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25582205	25582239	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:1;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25582240	25582983	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:2;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25582984	25583055	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:3;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25582984	25583055	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:2;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25583056	25585368	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:3;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25585369	25585440	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:4;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25585369	25585440	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:3;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25585441	25595154	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:4;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25595155	25595226	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:5;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25595155	25595226	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:4;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25595227	25599927	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:5;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25599928	25599999	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:6;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25599928	25599999	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:5;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25600000	25604709	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:6;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25604710	25604781	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:7;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25604710	25604781	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:6;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25604782	25607101	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:7;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25607102	25607173	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:8;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25607102	25607173	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:7;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25607174	25609546	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:8;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25609547	25609618	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:9;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25609547	25609618	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:8;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25609619	25632707	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:9;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25632708	25632847	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:10;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25632708	25632847	.	-	2	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:9;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25632848	25632936	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:10;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25632937	25633000	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:11;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25632937	25633000	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:10;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25633001	25633436	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:11;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25633437	25633488	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:12;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25633437	25633488	.	-	1	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:11;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25633489	25634048	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:12;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25634049	25634140	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:13;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25634049	25634140	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:12;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25634141	25634414	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:13;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25634415	25634561	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:14;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25634415	25634561	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:13;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25634562	25641161	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=intron:CHM13_chrY_T0001920:14;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25641162	25641372	.	-	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=exon:CHM13_chrY_T0001920:15;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25641162	25641164	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=CDS:CHM13_chrY_T0001920:14;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	25641162	25641164	.	-	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=CHM13_chrY_T0001920;gene_id=CHM13_chrY_G0000712;Parent=CHM13_chrY_T0001920;transcript_name=CHM13_chrY_T0001920;gene_name=DAZ1;ID=start_codon:CHM13_chrY_T0001920;Name=DAZ1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25661811	25719401	.	+	.	source_gene_common_name=DAZ2;source_gene=ENSG00000205944.12;gene_id=CHM13_chrY_G0000713;gene_biotype=protein_coding;gene_name=DAZ2;gene_sources=liftoff;ID=CHM13_chrY_G0000713;Name=DAZ2
CHM13_chrY	CAT	transcript	25661811	25719401	100	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_G0000713;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CHM13_chrY_T0001921;Name=DAZ2
CHM13_chrY	CAT	exon	25661811	25662107	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:0;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25662105	25662107	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:0;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	25662105	25662107	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=start_codon:CHM13_chrY_T0001921;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25662108	25668707	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:0;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25668708	25668854	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:1;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25668708	25668854	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:1;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25668855	25669128	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:1;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25669129	25669220	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:2;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25669129	25669220	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:2;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25669221	25669780	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:2;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25669781	25669832	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:3;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25669781	25669832	.	+	1	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:3;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25669833	25670268	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:3;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25670269	25670332	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:4;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25670269	25670332	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:4;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25670333	25670421	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:4;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25670422	25670561	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:5;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25670422	25670561	.	+	2	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:5;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25670562	25671961	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:5;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25671962	25672033	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:6;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25671962	25672033	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:6;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25672034	25674404	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:6;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25674405	25674476	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:7;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25674405	25674476	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:7;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25674477	25676795	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:7;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25676796	25676867	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:8;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25676796	25676867	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:8;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25676868	25683970	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:8;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25683971	25684042	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:9;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25683971	25684042	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:9;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25684043	25686347	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:9;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25686348	25686419	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:10;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25686348	25686419	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:10;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25686420	25696136	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:10;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25696137	25696208	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:11;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25696137	25696208	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:11;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25696209	25698520	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:11;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25698521	25698592	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:12;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25698521	25698592	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:12;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25698593	25700904	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:12;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25700905	25700976	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:13;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25700905	25700976	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:13;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25700977	25703289	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:13;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25703290	25703361	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:14;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25703290	25703361	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:14;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25703362	25705673	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:14;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25705674	25705745	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:15;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25705674	25705745	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:15;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25705746	25708058	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:15;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25708059	25708130	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:16;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25708059	25708130	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:16;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25708131	25708874	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:16;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25708875	25708909	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:17;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25708875	25708909	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:17;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25708910	25713482	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:17;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25713483	25713581	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:18;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25713483	25713546	.	+	1	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001921:18;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	25713544	25713546	.	+	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=stop_codon:CHM13_chrY_T0001921;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25713582	25717544	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001921:18;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25717545	25719401	.	+	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001921;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001921;transcript_name=CHM13_chrY_T0001921;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001921:19;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	25661897	25719401	100	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_G0000713;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CHM13_chrY_T0001922;Name=DAZ2
CHM13_chrY	CAT	exon	25661897	25662107	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:0;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25662105	25662107	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:0;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	25662105	25662107	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=start_codon:CHM13_chrY_T0001922;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25662108	25668707	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:0;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25668708	25668854	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:1;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25668708	25668854	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:1;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25668855	25669128	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:1;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25669129	25669220	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:2;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25669129	25669220	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:2;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25669221	25669780	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:2;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25669781	25669832	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:3;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25669781	25669832	.	+	1	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:3;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25669833	25670268	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:3;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25670269	25670332	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:4;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25670269	25670332	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:4;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25670333	25670421	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:4;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25670422	25670561	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:5;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25670422	25670561	.	+	2	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:5;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25670562	25671961	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:5;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25671962	25672033	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:6;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25671962	25672033	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:6;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25672034	25674404	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:6;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25674405	25674476	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:7;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25674405	25674476	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:7;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25674477	25676795	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:7;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25676796	25676867	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:8;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25676796	25676867	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:8;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25676868	25679191	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:8;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25679192	25679263	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:9;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25679192	25679263	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:9;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25679264	25681574	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:9;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25681575	25681646	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:10;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25681575	25681646	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:10;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25681647	25683970	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:10;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25683971	25684042	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:11;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25683971	25684042	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:11;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25684043	25686347	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:11;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25686348	25686419	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:12;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25686348	25686419	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:12;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25686420	25696136	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:12;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25696137	25696208	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:13;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25696137	25696208	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:13;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25696209	25698520	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:13;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25698521	25698592	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:14;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25698521	25698592	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:14;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25698593	25700904	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:14;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25700905	25700976	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:15;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25700905	25700976	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:15;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25700977	25703289	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:15;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25703290	25703361	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:16;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25703290	25703361	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:16;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25703362	25705673	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:16;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25705674	25705745	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:17;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25705674	25705745	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:17;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25705746	25708058	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:17;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25708059	25708130	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:18;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25708059	25708130	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:18;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25708131	25708874	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:18;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25708875	25708909	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:19;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25708875	25708909	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:19;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25708910	25713482	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:19;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25713483	25713581	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:20;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25713483	25713546	.	+	1	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001922:20;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	25713544	25713546	.	+	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=stop_codon:CHM13_chrY_T0001922;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25713582	25717544	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001922:20;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25717545	25719401	.	+	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001922;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001922;transcript_name=CHM13_chrY_T0001922;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001922:21;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	25661912	25718044	100	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_G0000713;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CHM13_chrY_T0001923;Name=DAZ2
CHM13_chrY	CAT	exon	25661912	25662107	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:0;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25662105	25662107	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:0;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	25662105	25662107	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=start_codon:CHM13_chrY_T0001923;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25662108	25668707	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:0;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25668708	25668854	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:1;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25668708	25668854	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:1;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25668855	25669128	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:1;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25669129	25669220	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:2;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25669129	25669220	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:2;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25669221	25669780	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:2;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25669781	25669832	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:3;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25669781	25669832	.	+	1	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:3;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25669833	25670268	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:3;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25670269	25670332	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:4;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25670269	25670332	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:4;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25670333	25670421	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:4;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25670422	25670561	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:5;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25670422	25670561	.	+	2	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:5;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25670562	25671961	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:5;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25671962	25672033	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:6;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25671962	25672033	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:6;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25672034	25674404	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:6;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25674405	25674476	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:7;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25674405	25674476	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:7;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25674477	25676795	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:7;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25676796	25676867	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:8;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25676796	25676867	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:8;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25676868	25686347	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:8;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25686348	25686419	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:9;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25686348	25686419	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:9;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25686420	25696136	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:9;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25696137	25696208	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:10;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25696137	25696208	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:10;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25696209	25698520	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:10;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25698521	25698592	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:11;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25698521	25698592	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:11;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25698593	25700904	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:11;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25700905	25700976	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:12;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25700905	25700976	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:12;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25700977	25703289	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:12;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25703290	25703361	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:13;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25703290	25703361	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:13;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25703362	25705673	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:13;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25705674	25705745	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:14;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25705674	25705745	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:14;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25705746	25708058	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:14;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25708059	25708130	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:15;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25708059	25708130	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:15;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25708131	25708874	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:15;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25708875	25708909	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:16;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25708875	25708909	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:16;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25708910	25713482	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:16;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25713483	25713581	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:17;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25713483	25713546	.	+	1	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=CDS:CHM13_chrY_T0001923:17;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	25713544	25713546	.	+	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=stop_codon:CHM13_chrY_T0001923;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25713582	25717544	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=intron:CHM13_chrY_T0001923:17;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25717545	25718044	.	+	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=CHM13_chrY_T0001923;gene_id=CHM13_chrY_G0000713;Parent=CHM13_chrY_T0001923;transcript_name=CHM13_chrY_T0001923;gene_name=DAZ2;ID=exon:CHM13_chrY_T0001923:18;Name=DAZ2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25789557	25790717	.	-	.	source_gene_common_name=TRIM60P9Y;source_gene=ENSG00000227251.1;gene_id=CHM13_chrY_G0000714;gene_biotype=processed_pseudogene;gene_name=TRIM60P9Y;gene_sources=liftoff;ID=CHM13_chrY_G0000714;Name=TRIM60P9Y
CHM13_chrY	CAT	transcript	25789557	25790717	1000	-	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=CHM13_chrY_T0001924;gene_id=CHM13_chrY_G0000714;Parent=CHM13_chrY_G0000714;transcript_name=CHM13_chrY_T0001924;gene_name=TRIM60P9Y;ID=CHM13_chrY_T0001924;Name=TRIM60P9Y
CHM13_chrY	CAT	exon	25789557	25790072	.	-	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=CHM13_chrY_T0001924;gene_id=CHM13_chrY_G0000714;Parent=CHM13_chrY_T0001924;transcript_name=CHM13_chrY_T0001924;gene_name=TRIM60P9Y;ID=exon:CHM13_chrY_T0001924:0;Name=TRIM60P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25790073	25790417	.	-	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=CHM13_chrY_T0001924;gene_id=CHM13_chrY_G0000714;Parent=CHM13_chrY_T0001924;transcript_name=CHM13_chrY_T0001924;gene_name=TRIM60P9Y;ID=intron:CHM13_chrY_T0001924:0;Name=TRIM60P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25790418	25790717	.	-	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=CHM13_chrY_T0001924;gene_id=CHM13_chrY_G0000714;Parent=CHM13_chrY_T0001924;transcript_name=CHM13_chrY_T0001924;gene_name=TRIM60P9Y;ID=exon:CHM13_chrY_T0001924:1;Name=TRIM60P9Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25797568	25799516	.	-	.	source_gene_common_name=ZNF736P3Y;source_gene=ENSG00000233126.3;gene_id=CHM13_chrY_G0000715;gene_biotype=processed_pseudogene;gene_name=ZNF736P3Y;gene_sources=liftoff;ID=CHM13_chrY_G0000715;Name=ZNF736P3Y
CHM13_chrY	CAT	transcript	25797568	25799516	1000	-	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=CHM13_chrY_T0001925;gene_id=CHM13_chrY_G0000715;Parent=CHM13_chrY_G0000715;transcript_name=CHM13_chrY_T0001925;gene_name=ZNF736P3Y;ID=CHM13_chrY_T0001925;Name=ZNF736P3Y
CHM13_chrY	CAT	exon	25797568	25798861	.	-	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=CHM13_chrY_T0001925;gene_id=CHM13_chrY_G0000715;Parent=CHM13_chrY_T0001925;transcript_name=CHM13_chrY_T0001925;gene_name=ZNF736P3Y;ID=exon:CHM13_chrY_T0001925:0;Name=ZNF736P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25798862	25799026	.	-	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=CHM13_chrY_T0001925;gene_id=CHM13_chrY_G0000715;Parent=CHM13_chrY_T0001925;transcript_name=CHM13_chrY_T0001925;gene_name=ZNF736P3Y;ID=intron:CHM13_chrY_T0001925:0;Name=ZNF736P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25799027	25799083	.	-	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=CHM13_chrY_T0001925;gene_id=CHM13_chrY_G0000715;Parent=CHM13_chrY_T0001925;transcript_name=CHM13_chrY_T0001925;gene_name=ZNF736P3Y;ID=exon:CHM13_chrY_T0001925:1;Name=ZNF736P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25799084	25799402	.	-	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=CHM13_chrY_T0001925;gene_id=CHM13_chrY_G0000715;Parent=CHM13_chrY_T0001925;transcript_name=CHM13_chrY_T0001925;gene_name=ZNF736P3Y;ID=intron:CHM13_chrY_T0001925:1;Name=ZNF736P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25799403	25799516	.	-	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=CHM13_chrY_T0001925;gene_id=CHM13_chrY_G0000715;Parent=CHM13_chrY_T0001925;transcript_name=CHM13_chrY_T0001925;gene_name=ZNF736P3Y;ID=exon:CHM13_chrY_T0001925:2;Name=ZNF736P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25822099	25823168	.	-	.	source_gene_common_name=TRIM60P8Y;source_gene=ENSG00000232764.1;gene_id=CHM13_chrY_G0000716;gene_biotype=processed_pseudogene;gene_name=TRIM60P8Y;gene_sources=liftoff;ID=CHM13_chrY_G0000716;Name=TRIM60P8Y
CHM13_chrY	CAT	transcript	25822099	25823168	1000	-	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=CHM13_chrY_T0001926;gene_id=CHM13_chrY_G0000716;Parent=CHM13_chrY_G0000716;transcript_name=CHM13_chrY_T0001926;gene_name=TRIM60P8Y;ID=CHM13_chrY_T0001926;Name=TRIM60P8Y
CHM13_chrY	CAT	exon	25822099	25822609	.	-	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=CHM13_chrY_T0001926;gene_id=CHM13_chrY_G0000716;Parent=CHM13_chrY_T0001926;transcript_name=CHM13_chrY_T0001926;gene_name=TRIM60P8Y;ID=exon:CHM13_chrY_T0001926:0;Name=TRIM60P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25822610	25822917	.	-	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=CHM13_chrY_T0001926;gene_id=CHM13_chrY_G0000716;Parent=CHM13_chrY_T0001926;transcript_name=CHM13_chrY_T0001926;gene_name=TRIM60P8Y;ID=intron:CHM13_chrY_T0001926:0;Name=TRIM60P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25822918	25823168	.	-	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=CHM13_chrY_T0001926;gene_id=CHM13_chrY_G0000716;Parent=CHM13_chrY_T0001926;transcript_name=CHM13_chrY_T0001926;gene_name=TRIM60P8Y;ID=exon:CHM13_chrY_T0001926:1;Name=TRIM60P8Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25830896	25831699	.	-	.	source_gene_common_name=ZNF736P5Y;source_gene=ENSG00000230819.1;alternative_source_transcripts=ENST00000451173.1;gene_id=CHM13_chrY_G0000717;gene_biotype=processed_pseudogene;gene_name=ZNF736P5Y;gene_sources=liftoff;ID=CHM13_chrY_G0000717;Name=ZNF736P5Y
CHM13_chrY	CAT	transcript	25830896	25831699	1000	-	.	source_transcript=ENST00000451173.1;source_transcript_name=ZNF736P5Y-201;source_gene=ENSG00000230819.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230819.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451173.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P5Y;alternative_source_transcripts=ENST00000451173.1;transcript_id=CHM13_chrY_T0001927;gene_id=CHM13_chrY_G0000717;Parent=CHM13_chrY_G0000717;transcript_name=CHM13_chrY_T0001927;gene_name=ZNF736P5Y;ID=CHM13_chrY_T0001927;Name=ZNF736P5Y
CHM13_chrY	CAT	exon	25830896	25831699	.	-	.	source_transcript=ENST00000451173.1;source_transcript_name=ZNF736P5Y-201;source_gene=ENSG00000230819.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230819.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P5Y;alternative_source_transcripts=ENST00000451173.1;transcript_id=CHM13_chrY_T0001927;gene_id=CHM13_chrY_G0000717;Parent=CHM13_chrY_T0001927;transcript_name=CHM13_chrY_T0001927;gene_name=ZNF736P5Y;ID=exon:CHM13_chrY_T0001927:0;Name=ZNF736P5Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25843297	25874944	.	-	.	source_gene_common_name=BPY2;source_gene=ENSG00000183753.10;gene_id=CHM13_chrY_G0000718;gene_biotype=protein_coding;gene_name=BPY2;gene_sources=liftoff;ID=CHM13_chrY_G0000718;Name=BPY2
CHM13_chrY	CAT	transcript	25843297	25864500	100	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_G0000718;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=CHM13_chrY_T0001928;Name=BPY2
CHM13_chrY	CAT	exon	25843297	25843618	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=exon:CHM13_chrY_T0001928:0;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25843619	25843712	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=intron:CHM13_chrY_T0001928:0;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25843713	25843837	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=exon:CHM13_chrY_T0001928:1;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25843838	25850387	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=intron:CHM13_chrY_T0001928:1;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25850388	25850512	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=exon:CHM13_chrY_T0001928:2;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25850494	25850512	.	-	1	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=CDS:CHM13_chrY_T0001928:0;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	25850494	25850496	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=stop_codon:CHM13_chrY_T0001928;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25850513	25851204	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=intron:CHM13_chrY_T0001928:2;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25851205	25851310	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=exon:CHM13_chrY_T0001928:3;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25851205	25851310	.	-	2	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=CDS:CHM13_chrY_T0001928:1;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25851311	25854164	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=intron:CHM13_chrY_T0001928:3;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25854165	25854282	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=exon:CHM13_chrY_T0001928:4;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25854165	25854282	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=CDS:CHM13_chrY_T0001928:2;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25854283	25856341	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=intron:CHM13_chrY_T0001928:4;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25856342	25856460	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=exon:CHM13_chrY_T0001928:5;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25856342	25856419	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=CDS:CHM13_chrY_T0001928:3;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	25856417	25856419	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=start_codon:CHM13_chrY_T0001928;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25856461	25860869	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=intron:CHM13_chrY_T0001928:5;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25860870	25861006	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=exon:CHM13_chrY_T0001928:6;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25861007	25864071	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=intron:CHM13_chrY_T0001928:6;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25864072	25864194	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=exon:CHM13_chrY_T0001928:7;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25864195	25864469	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=intron:CHM13_chrY_T0001928:7;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25864470	25864500	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001928;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001928;transcript_name=CHM13_chrY_T0001928;gene_name=BPY2;ID=exon:CHM13_chrY_T0001928:8;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	25843356	25864476	1000	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_G0000718;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=CHM13_chrY_T0001929;Name=BPY2
CHM13_chrY	CAT	exon	25843356	25843618	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=exon:CHM13_chrY_T0001929:0;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25843619	25843707	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=intron:CHM13_chrY_T0001929:0;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25843708	25843837	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=exon:CHM13_chrY_T0001929:1;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25843838	25850387	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=intron:CHM13_chrY_T0001929:1;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25850388	25850512	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=exon:CHM13_chrY_T0001929:2;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25850513	25851204	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=intron:CHM13_chrY_T0001929:2;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25851205	25851310	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=exon:CHM13_chrY_T0001929:3;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25851311	25856341	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=intron:CHM13_chrY_T0001929:3;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25856342	25856460	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=exon:CHM13_chrY_T0001929:4;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25856461	25860869	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=intron:CHM13_chrY_T0001929:4;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25860870	25861006	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=exon:CHM13_chrY_T0001929:5;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25861007	25864071	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=intron:CHM13_chrY_T0001929:5;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25864072	25864194	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=exon:CHM13_chrY_T0001929:6;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25864195	25864469	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=intron:CHM13_chrY_T0001929:6;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25864470	25864476	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001929;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001929;transcript_name=CHM13_chrY_T0001929;gene_name=BPY2;ID=exon:CHM13_chrY_T0001929:7;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	25850494	25856419	100	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_G0000718;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=CHM13_chrY_T0001930;Name=BPY2
CHM13_chrY	CAT	exon	25850494	25850512	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001930;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=exon:CHM13_chrY_T0001930:0;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25850494	25850512	.	-	1	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001930;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=CDS:CHM13_chrY_T0001930:0;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	25850494	25850496	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001930;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=stop_codon:CHM13_chrY_T0001930;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25850513	25851204	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001930;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=intron:CHM13_chrY_T0001930:0;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25851205	25851310	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001930;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=exon:CHM13_chrY_T0001930:1;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25851205	25851310	.	-	2	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001930;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=CDS:CHM13_chrY_T0001930:1;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25851311	25854164	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001930;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=intron:CHM13_chrY_T0001930:1;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25854165	25854282	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001930;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=exon:CHM13_chrY_T0001930:2;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25854165	25854282	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001930;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=CDS:CHM13_chrY_T0001930:2;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25854283	25856341	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001930;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=intron:CHM13_chrY_T0001930:2;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25856342	25856419	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001930;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=exon:CHM13_chrY_T0001930:3;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25856342	25856419	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001930;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=CDS:CHM13_chrY_T0001930:3;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	25856417	25856419	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001930;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001930;transcript_name=CHM13_chrY_T0001930;gene_name=BPY2;ID=start_codon:CHM13_chrY_T0001930;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	25856387	25874944	100	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001931;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_G0000718;transcript_name=CHM13_chrY_T0001931;gene_name=BPY2;ID=CHM13_chrY_T0001931;Name=BPY2
CHM13_chrY	CAT	exon	25856387	25856460	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001931;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001931;transcript_name=CHM13_chrY_T0001931;gene_name=BPY2;ID=exon:CHM13_chrY_T0001931:0;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	25856387	25856419	.	-	0	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001931;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001931;transcript_name=CHM13_chrY_T0001931;gene_name=BPY2;ID=CDS:CHM13_chrY_T0001931:0;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	25856417	25856419	.	-	0	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001931;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001931;transcript_name=CHM13_chrY_T0001931;gene_name=BPY2;ID=start_codon:CHM13_chrY_T0001931;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25856461	25860869	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001931;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001931;transcript_name=CHM13_chrY_T0001931;gene_name=BPY2;ID=intron:CHM13_chrY_T0001931:0;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25860870	25861006	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001931;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001931;transcript_name=CHM13_chrY_T0001931;gene_name=BPY2;ID=exon:CHM13_chrY_T0001931:1;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25861007	25864071	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001931;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001931;transcript_name=CHM13_chrY_T0001931;gene_name=BPY2;ID=intron:CHM13_chrY_T0001931:1;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25864072	25864194	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001931;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001931;transcript_name=CHM13_chrY_T0001931;gene_name=BPY2;ID=exon:CHM13_chrY_T0001931:2;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25864195	25864546	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001931;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001931;transcript_name=CHM13_chrY_T0001931;gene_name=BPY2;ID=intron:CHM13_chrY_T0001931:2;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25864547	25864615	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001931;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001931;transcript_name=CHM13_chrY_T0001931;gene_name=BPY2;ID=exon:CHM13_chrY_T0001931:3;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25864616	25874788	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001931;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001931;transcript_name=CHM13_chrY_T0001931;gene_name=BPY2;ID=intron:CHM13_chrY_T0001931:3;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25874789	25874944	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=CHM13_chrY_T0001931;gene_id=CHM13_chrY_G0000718;Parent=CHM13_chrY_T0001931;transcript_name=CHM13_chrY_T0001931;gene_name=BPY2;ID=exon:CHM13_chrY_T0001931:4;Name=BPY2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25875479	25912299	.	-	.	source_gene_common_name=TTTY4C;source_gene=ENSG00000228296.1;gene_id=CHM13_chrY_G0000719;gene_biotype=lncRNA;gene_name=TTTY4C;gene_sources=liftoff;ID=CHM13_chrY_G0000719;Name=TTTY4C
CHM13_chrY	CAT	transcript	25875479	25912299	1000	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=CHM13_chrY_T0001932;gene_id=CHM13_chrY_G0000719;Parent=CHM13_chrY_G0000719;transcript_name=CHM13_chrY_T0001932;gene_name=TTTY4C;ID=CHM13_chrY_T0001932;Name=TTTY4C
CHM13_chrY	CAT	exon	25875479	25876479	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=CHM13_chrY_T0001932;gene_id=CHM13_chrY_G0000719;Parent=CHM13_chrY_T0001932;transcript_name=CHM13_chrY_T0001932;gene_name=TTTY4C;ID=exon:CHM13_chrY_T0001932:0;Name=TTTY4C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25876480	25883147	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=CHM13_chrY_T0001932;gene_id=CHM13_chrY_G0000719;Parent=CHM13_chrY_T0001932;transcript_name=CHM13_chrY_T0001932;gene_name=TTTY4C;ID=intron:CHM13_chrY_T0001932:0;Name=TTTY4C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25883148	25883255	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=CHM13_chrY_T0001932;gene_id=CHM13_chrY_G0000719;Parent=CHM13_chrY_T0001932;transcript_name=CHM13_chrY_T0001932;gene_name=TTTY4C;ID=exon:CHM13_chrY_T0001932:1;Name=TTTY4C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25883256	25885059	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=CHM13_chrY_T0001932;gene_id=CHM13_chrY_G0000719;Parent=CHM13_chrY_T0001932;transcript_name=CHM13_chrY_T0001932;gene_name=TTTY4C;ID=intron:CHM13_chrY_T0001932:1;Name=TTTY4C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25885060	25885135	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=CHM13_chrY_T0001932;gene_id=CHM13_chrY_G0000719;Parent=CHM13_chrY_T0001932;transcript_name=CHM13_chrY_T0001932;gene_name=TTTY4C;ID=exon:CHM13_chrY_T0001932:2;Name=TTTY4C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25885136	25912138	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=CHM13_chrY_T0001932;gene_id=CHM13_chrY_G0000719;Parent=CHM13_chrY_T0001932;transcript_name=CHM13_chrY_T0001932;gene_name=TTTY4C;ID=intron:CHM13_chrY_T0001932:2;Name=TTTY4C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25912139	25912299	.	-	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=CHM13_chrY_T0001932;gene_id=CHM13_chrY_G0000719;Parent=CHM13_chrY_T0001932;transcript_name=CHM13_chrY_T0001932;gene_name=TTTY4C;ID=exon:CHM13_chrY_T0001932:3;Name=TTTY4C;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25981007	25982249	.	+	.	source_gene_common_name=ZNF736P4Y;source_gene=ENSG00000236379.2;alternative_source_transcripts=ENST00000454995.1;gene_id=CHM13_chrY_G0000720;gene_biotype=processed_pseudogene;gene_name=ZNF736P4Y;gene_sources=liftoff;ID=CHM13_chrY_G0000720;Name=ZNF736P4Y
CHM13_chrY	CAT	transcript	25981007	25982249	1000	+	.	source_transcript=ENST00000454995.1;source_transcript_name=ZNF736P4Y-201;source_gene=ENSG00000236379.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236379.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P4Y;alternative_source_transcripts=ENST00000454995.1;transcript_id=CHM13_chrY_T0001933;gene_id=CHM13_chrY_G0000720;Parent=CHM13_chrY_G0000720;transcript_name=CHM13_chrY_T0001933;gene_name=ZNF736P4Y;ID=CHM13_chrY_T0001933;Name=ZNF736P4Y
CHM13_chrY	CAT	exon	25981007	25982249	.	+	.	source_transcript=ENST00000454995.1;source_transcript_name=ZNF736P4Y-201;source_gene=ENSG00000236379.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236379.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P4Y;alternative_source_transcripts=ENST00000454995.1;transcript_id=CHM13_chrY_T0001933;gene_id=CHM13_chrY_G0000720;Parent=CHM13_chrY_T0001933;transcript_name=CHM13_chrY_T0001933;gene_name=ZNF736P4Y;ID=exon:CHM13_chrY_T0001933:0;Name=ZNF736P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25986928	25987645	.	+	.	source_gene_common_name=ENSG00000274899;source_gene=ENSG00000274899.1;gene_id=CHM13_chrY_G0000721;gene_biotype=processed_pseudogene;gene_name=ENSG00000274899;gene_sources=liftoff;ID=CHM13_chrY_G0000721;Name=ENSG00000274899
CHM13_chrY	CAT	transcript	25986928	25987645	1000	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=CHM13_chrY_T0001934;gene_id=CHM13_chrY_G0000721;Parent=CHM13_chrY_G0000721;transcript_name=CHM13_chrY_T0001934;gene_name=ENSG00000274899;ID=CHM13_chrY_T0001934;Name=ENSG00000274899
CHM13_chrY	CAT	exon	25986928	25987200	.	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=CHM13_chrY_T0001934;gene_id=CHM13_chrY_G0000721;Parent=CHM13_chrY_T0001934;transcript_name=CHM13_chrY_T0001934;gene_name=ENSG00000274899;ID=exon:CHM13_chrY_T0001934:0;Name=ENSG00000274899;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25987201	25987503	.	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=CHM13_chrY_T0001934;gene_id=CHM13_chrY_G0000721;Parent=CHM13_chrY_T0001934;transcript_name=CHM13_chrY_T0001934;gene_name=ENSG00000274899;ID=intron:CHM13_chrY_T0001934:0;Name=ENSG00000274899;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25987504	25987645	.	+	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=CHM13_chrY_T0001934;gene_id=CHM13_chrY_G0000721;Parent=CHM13_chrY_T0001934;transcript_name=CHM13_chrY_T0001934;gene_name=ENSG00000274899;ID=exon:CHM13_chrY_T0001934:1;Name=ENSG00000274899;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	25994676	26026263	.	-	.	source_gene_common_name=TTTY17C;source_gene=ENSG00000223641.3;gene_id=CHM13_chrY_G0000722;gene_biotype=lncRNA;gene_name=TTTY17C;gene_sources=liftoff;ID=CHM13_chrY_G0000722;Name=TTTY17C
CHM13_chrY	CAT	transcript	25994676	26026131	1000	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001935;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_G0000722;transcript_name=CHM13_chrY_T0001935;gene_name=TTTY17C;ID=CHM13_chrY_T0001935;Name=TTTY17C
CHM13_chrY	CAT	exon	25994676	25994996	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001935;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001935;transcript_name=CHM13_chrY_T0001935;gene_name=TTTY17C;ID=exon:CHM13_chrY_T0001935:0;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25994997	25995996	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001935;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001935;transcript_name=CHM13_chrY_T0001935;gene_name=TTTY17C;ID=intron:CHM13_chrY_T0001935:0;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25995997	25996157	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001935;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001935;transcript_name=CHM13_chrY_T0001935;gene_name=TTTY17C;ID=exon:CHM13_chrY_T0001935:1;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25996158	25997123	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001935;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001935;transcript_name=CHM13_chrY_T0001935;gene_name=TTTY17C;ID=intron:CHM13_chrY_T0001935:1;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25997124	25997248	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001935;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001935;transcript_name=CHM13_chrY_T0001935;gene_name=TTTY17C;ID=exon:CHM13_chrY_T0001935:2;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25997249	26013013	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001935;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001935;transcript_name=CHM13_chrY_T0001935;gene_name=TTTY17C;ID=intron:CHM13_chrY_T0001935:2;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26013014	26013122	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001935;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001935;transcript_name=CHM13_chrY_T0001935;gene_name=TTTY17C;ID=exon:CHM13_chrY_T0001935:3;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26013123	26025729	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001935;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001935;transcript_name=CHM13_chrY_T0001935;gene_name=TTTY17C;ID=intron:CHM13_chrY_T0001935:3;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26025730	26025799	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001935;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001935;transcript_name=CHM13_chrY_T0001935;gene_name=TTTY17C;ID=exon:CHM13_chrY_T0001935:4;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26025800	26026085	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001935;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001935;transcript_name=CHM13_chrY_T0001935;gene_name=TTTY17C;ID=intron:CHM13_chrY_T0001935:4;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26026086	26026131	.	-	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001935;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001935;transcript_name=CHM13_chrY_T0001935;gene_name=TTTY17C;ID=exon:CHM13_chrY_T0001935:5;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	25994676	26026263	1000	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001936;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_G0000722;transcript_name=CHM13_chrY_T0001936;gene_name=TTTY17C;ID=CHM13_chrY_T0001936;Name=TTTY17C
CHM13_chrY	CAT	exon	25994676	25994996	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001936;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001936;transcript_name=CHM13_chrY_T0001936;gene_name=TTTY17C;ID=exon:CHM13_chrY_T0001936:0;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25994997	25995996	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001936;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001936;transcript_name=CHM13_chrY_T0001936;gene_name=TTTY17C;ID=intron:CHM13_chrY_T0001936:0;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25995997	25996157	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001936;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001936;transcript_name=CHM13_chrY_T0001936;gene_name=TTTY17C;ID=exon:CHM13_chrY_T0001936:1;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25996158	25997123	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001936;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001936;transcript_name=CHM13_chrY_T0001936;gene_name=TTTY17C;ID=intron:CHM13_chrY_T0001936:1;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	25997124	25997248	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001936;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001936;transcript_name=CHM13_chrY_T0001936;gene_name=TTTY17C;ID=exon:CHM13_chrY_T0001936:2;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	25997249	26007374	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001936;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001936;transcript_name=CHM13_chrY_T0001936;gene_name=TTTY17C;ID=intron:CHM13_chrY_T0001936:2;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26007375	26007491	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001936;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001936;transcript_name=CHM13_chrY_T0001936;gene_name=TTTY17C;ID=exon:CHM13_chrY_T0001936:3;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26007492	26025729	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001936;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001936;transcript_name=CHM13_chrY_T0001936;gene_name=TTTY17C;ID=intron:CHM13_chrY_T0001936:3;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26025730	26025799	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001936;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001936;transcript_name=CHM13_chrY_T0001936;gene_name=TTTY17C;ID=exon:CHM13_chrY_T0001936:4;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26025800	26026193	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001936;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001936;transcript_name=CHM13_chrY_T0001936;gene_name=TTTY17C;ID=intron:CHM13_chrY_T0001936:4;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26026194	26026263	.	-	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=CHM13_chrY_T0001936;gene_id=CHM13_chrY_G0000722;Parent=CHM13_chrY_T0001936;transcript_name=CHM13_chrY_T0001936;gene_name=TTTY17C;ID=exon:CHM13_chrY_T0001936:5;Name=TTTY17C;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26026577	26031667	.	+	.	source_gene_common_name=ENSG00000294545;source_gene=ENSG00000294545.1;alternative_source_transcripts=ENST00000724319.1;gene_id=CHM13_chrY_G0000723;gene_biotype=lncRNA;gene_name=ENSG00000294545;gene_sources=liftoff;ID=CHM13_chrY_G0000723;Name=ENSG00000294545
CHM13_chrY	CAT	transcript	26026577	26031667	1000	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=CHM13_chrY_T0001937;gene_id=CHM13_chrY_G0000723;Parent=CHM13_chrY_G0000723;transcript_name=CHM13_chrY_T0001937;gene_name=ENSG00000294545;ID=CHM13_chrY_T0001937;Name=ENSG00000294545
CHM13_chrY	CAT	exon	26026577	26026673	.	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=CHM13_chrY_T0001937;gene_id=CHM13_chrY_G0000723;Parent=CHM13_chrY_T0001937;transcript_name=CHM13_chrY_T0001937;gene_name=ENSG00000294545;ID=exon:CHM13_chrY_T0001937:0;Name=ENSG00000294545;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26026674	26031325	.	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=CHM13_chrY_T0001937;gene_id=CHM13_chrY_G0000723;Parent=CHM13_chrY_T0001937;transcript_name=CHM13_chrY_T0001937;gene_name=ENSG00000294545;ID=intron:CHM13_chrY_T0001937:0;Name=ENSG00000294545;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26031326	26031667	.	+	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000724319.1;transcript_id=CHM13_chrY_T0001937;gene_id=CHM13_chrY_G0000723;Parent=CHM13_chrY_T0001937;transcript_name=CHM13_chrY_T0001937;gene_name=ENSG00000294545;ID=exon:CHM13_chrY_T0001937:1;Name=ENSG00000294545;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26076650	26161231	.	+	.	source_gene_common_name=ENSG00000306715;source_gene=ENSG00000306715.1;alternative_source_transcripts=ENST00000820371.1;gene_id=CHM13_chrY_G0000724;gene_biotype=lncRNA;gene_name=ENSG00000306715;gene_sources=liftoff;ID=CHM13_chrY_G0000724;Name=ENSG00000306715
CHM13_chrY	CAT	transcript	26076650	26161231	1000	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=CHM13_chrY_T0001938;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_G0000724;transcript_name=CHM13_chrY_T0001938;gene_name=ENSG00000306715;ID=CHM13_chrY_T0001938;Name=ENSG00000306715
CHM13_chrY	CAT	exon	26076650	26076748	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=CHM13_chrY_T0001938;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001938;transcript_name=CHM13_chrY_T0001938;gene_name=ENSG00000306715;ID=exon:CHM13_chrY_T0001938:0;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26076749	26088355	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=CHM13_chrY_T0001938;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001938;transcript_name=CHM13_chrY_T0001938;gene_name=ENSG00000306715;ID=intron:CHM13_chrY_T0001938:0;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26088356	26088463	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=CHM13_chrY_T0001938;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001938;transcript_name=CHM13_chrY_T0001938;gene_name=ENSG00000306715;ID=exon:CHM13_chrY_T0001938:1;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26088464	26102903	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=CHM13_chrY_T0001938;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001938;transcript_name=CHM13_chrY_T0001938;gene_name=ENSG00000306715;ID=intron:CHM13_chrY_T0001938:1;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26102904	26103008	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=CHM13_chrY_T0001938;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001938;transcript_name=CHM13_chrY_T0001938;gene_name=ENSG00000306715;ID=exon:CHM13_chrY_T0001938:2;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26103009	26160819	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=CHM13_chrY_T0001938;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001938;transcript_name=CHM13_chrY_T0001938;gene_name=ENSG00000306715;ID=intron:CHM13_chrY_T0001938:2;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26160820	26161231	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820371.1;transcript_id=CHM13_chrY_T0001938;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001938;transcript_name=CHM13_chrY_T0001938;gene_name=ENSG00000306715;ID=exon:CHM13_chrY_T0001938:3;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26076681	26108292	1000	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=CHM13_chrY_T0001939;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_G0000724;transcript_name=CHM13_chrY_T0001939;gene_name=ENSG00000306715;ID=CHM13_chrY_T0001939;Name=ENSG00000306715
CHM13_chrY	CAT	exon	26076681	26076748	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=CHM13_chrY_T0001939;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001939;transcript_name=CHM13_chrY_T0001939;gene_name=ENSG00000306715;ID=exon:CHM13_chrY_T0001939:0;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26076749	26088355	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=CHM13_chrY_T0001939;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001939;transcript_name=CHM13_chrY_T0001939;gene_name=ENSG00000306715;ID=intron:CHM13_chrY_T0001939:0;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26088356	26088463	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=CHM13_chrY_T0001939;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001939;transcript_name=CHM13_chrY_T0001939;gene_name=ENSG00000306715;ID=exon:CHM13_chrY_T0001939:1;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26088464	26102903	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=CHM13_chrY_T0001939;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001939;transcript_name=CHM13_chrY_T0001939;gene_name=ENSG00000306715;ID=intron:CHM13_chrY_T0001939:1;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26102904	26103008	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=CHM13_chrY_T0001939;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001939;transcript_name=CHM13_chrY_T0001939;gene_name=ENSG00000306715;ID=exon:CHM13_chrY_T0001939:2;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26103009	26107637	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=CHM13_chrY_T0001939;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001939;transcript_name=CHM13_chrY_T0001939;gene_name=ENSG00000306715;ID=intron:CHM13_chrY_T0001939:2;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26107638	26108292	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=CHM13_chrY_T0001939;gene_id=CHM13_chrY_G0000724;Parent=CHM13_chrY_T0001939;transcript_name=CHM13_chrY_T0001939;gene_name=ENSG00000306715;ID=exon:CHM13_chrY_T0001939:3;Name=ENSG00000306715;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26078990	26085937	.	+	.	source_gene_common_name=RBMY2YP;source_gene=ENSG00000227633.1;alternative_source_transcripts=ENST00000423333.1;gene_id=CHM13_chrY_G0000725;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2YP;gene_sources=liftoff;ID=CHM13_chrY_G0000725;Name=RBMY2YP
CHM13_chrY	CAT	transcript	26078990	26085937	1000	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=CHM13_chrY_T0001940;gene_id=CHM13_chrY_G0000725;Parent=CHM13_chrY_G0000725;transcript_name=CHM13_chrY_T0001940;gene_name=RBMY2YP;ID=CHM13_chrY_T0001940;Name=RBMY2YP
CHM13_chrY	CAT	exon	26078990	26079102	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=CHM13_chrY_T0001940;gene_id=CHM13_chrY_G0000725;Parent=CHM13_chrY_T0001940;transcript_name=CHM13_chrY_T0001940;gene_name=RBMY2YP;ID=exon:CHM13_chrY_T0001940:0;Name=RBMY2YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26079103	26079514	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=CHM13_chrY_T0001940;gene_id=CHM13_chrY_G0000725;Parent=CHM13_chrY_T0001940;transcript_name=CHM13_chrY_T0001940;gene_name=RBMY2YP;ID=intron:CHM13_chrY_T0001940:0;Name=RBMY2YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26079515	26079616	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=CHM13_chrY_T0001940;gene_id=CHM13_chrY_G0000725;Parent=CHM13_chrY_T0001940;transcript_name=CHM13_chrY_T0001940;gene_name=RBMY2YP;ID=exon:CHM13_chrY_T0001940:1;Name=RBMY2YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26079617	26082004	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=CHM13_chrY_T0001940;gene_id=CHM13_chrY_G0000725;Parent=CHM13_chrY_T0001940;transcript_name=CHM13_chrY_T0001940;gene_name=RBMY2YP;ID=intron:CHM13_chrY_T0001940:1;Name=RBMY2YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26082005	26082186	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=CHM13_chrY_T0001940;gene_id=CHM13_chrY_G0000725;Parent=CHM13_chrY_T0001940;transcript_name=CHM13_chrY_T0001940;gene_name=RBMY2YP;ID=exon:CHM13_chrY_T0001940:2;Name=RBMY2YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26082187	26084928	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=CHM13_chrY_T0001940;gene_id=CHM13_chrY_G0000725;Parent=CHM13_chrY_T0001940;transcript_name=CHM13_chrY_T0001940;gene_name=RBMY2YP;ID=intron:CHM13_chrY_T0001940:2;Name=RBMY2YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26084929	26085039	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=CHM13_chrY_T0001940;gene_id=CHM13_chrY_G0000725;Parent=CHM13_chrY_T0001940;transcript_name=CHM13_chrY_T0001940;gene_name=RBMY2YP;ID=exon:CHM13_chrY_T0001940:3;Name=RBMY2YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26085040	26085120	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=CHM13_chrY_T0001940;gene_id=CHM13_chrY_G0000725;Parent=CHM13_chrY_T0001940;transcript_name=CHM13_chrY_T0001940;gene_name=RBMY2YP;ID=intron:CHM13_chrY_T0001940:3;Name=RBMY2YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26085121	26085209	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=CHM13_chrY_T0001940;gene_id=CHM13_chrY_G0000725;Parent=CHM13_chrY_T0001940;transcript_name=CHM13_chrY_T0001940;gene_name=RBMY2YP;ID=exon:CHM13_chrY_T0001940:4;Name=RBMY2YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26085210	26085622	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=CHM13_chrY_T0001940;gene_id=CHM13_chrY_G0000725;Parent=CHM13_chrY_T0001940;transcript_name=CHM13_chrY_T0001940;gene_name=RBMY2YP;ID=intron:CHM13_chrY_T0001940:4;Name=RBMY2YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26085623	26085937	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;alternative_source_transcripts=ENST00000423333.1;transcript_id=CHM13_chrY_T0001940;gene_id=CHM13_chrY_G0000725;Parent=CHM13_chrY_T0001940;transcript_name=CHM13_chrY_T0001940;gene_name=RBMY2YP;ID=exon:CHM13_chrY_T0001940:5;Name=RBMY2YP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26120141	26120215	.	+	.	source_gene_common_name=ENSG00000279115;source_gene=ENSG00000279115.2;alternative_source_transcripts=ENST00000624491.2;gene_id=CHM13_chrY_G0000726;gene_biotype=processed_pseudogene;gene_name=ENSG00000279115;gene_sources=liftoff;ID=CHM13_chrY_G0000726;Name=ENSG00000279115
CHM13_chrY	CAT	transcript	26120141	26120215	1000	+	.	source_transcript=ENST00000624491.2;source_transcript_name=ENST00000624491;source_gene=ENSG00000279115.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279115.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624491.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624491.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279115;alternative_source_transcripts=ENST00000624491.2;transcript_id=CHM13_chrY_T0001941;gene_id=CHM13_chrY_G0000726;Parent=CHM13_chrY_G0000726;transcript_name=CHM13_chrY_T0001941;gene_name=ENSG00000279115;ID=CHM13_chrY_T0001941;Name=ENSG00000279115
CHM13_chrY	CAT	exon	26120141	26120215	.	+	.	source_transcript=ENST00000624491.2;source_transcript_name=ENST00000624491;source_gene=ENSG00000279115.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279115.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624491.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624491.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279115;alternative_source_transcripts=ENST00000624491.2;transcript_id=CHM13_chrY_T0001941;gene_id=CHM13_chrY_G0000726;Parent=CHM13_chrY_T0001941;transcript_name=CHM13_chrY_T0001941;gene_name=ENSG00000279115;ID=exon:CHM13_chrY_T0001941:0;Name=ENSG00000279115;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26189938	26207105	.	-	.	source_gene_common_name=ENSG00000293927;source_gene=ENSG00000293927.1;gene_id=CHM13_chrY_G0000727;gene_biotype=lncRNA;gene_name=ENSG00000293927;gene_sources=liftoff;ID=CHM13_chrY_G0000727;Name=ENSG00000293927
CHM13_chrY	CAT	transcript	26189938	26207105	1000	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=CHM13_chrY_T0001942;gene_id=CHM13_chrY_G0000727;Parent=CHM13_chrY_G0000727;transcript_name=CHM13_chrY_T0001942;gene_name=ENSG00000293927;ID=CHM13_chrY_T0001942;Name=ENSG00000293927
CHM13_chrY	CAT	exon	26189938	26191260	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=CHM13_chrY_T0001942;gene_id=CHM13_chrY_G0000727;Parent=CHM13_chrY_T0001942;transcript_name=CHM13_chrY_T0001942;gene_name=ENSG00000293927;ID=exon:CHM13_chrY_T0001942:0;Name=ENSG00000293927;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26191261	26199296	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=CHM13_chrY_T0001942;gene_id=CHM13_chrY_G0000727;Parent=CHM13_chrY_T0001942;transcript_name=CHM13_chrY_T0001942;gene_name=ENSG00000293927;ID=intron:CHM13_chrY_T0001942:0;Name=ENSG00000293927;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26199297	26199465	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=CHM13_chrY_T0001942;gene_id=CHM13_chrY_G0000727;Parent=CHM13_chrY_T0001942;transcript_name=CHM13_chrY_T0001942;gene_name=ENSG00000293927;ID=exon:CHM13_chrY_T0001942:1;Name=ENSG00000293927;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26199466	26207006	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=CHM13_chrY_T0001942;gene_id=CHM13_chrY_G0000727;Parent=CHM13_chrY_T0001942;transcript_name=CHM13_chrY_T0001942;gene_name=ENSG00000293927;ID=intron:CHM13_chrY_T0001942:1;Name=ENSG00000293927;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26207007	26207105	.	-	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=CHM13_chrY_T0001942;gene_id=CHM13_chrY_G0000727;Parent=CHM13_chrY_T0001942;transcript_name=CHM13_chrY_T0001942;gene_name=ENSG00000293927;ID=exon:CHM13_chrY_T0001942:2;Name=ENSG00000293927;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26199297	26199465	.	-	.	source_gene_common_name=SEPTIN14P22;source_gene=ENSG00000248792.2;gene_id=CHM13_chrY_G0000728;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=SEPTIN14P22;gene_sources=liftoff;ID=CHM13_chrY_G0000728;Name=SEPTIN14P22
CHM13_chrY	CAT	transcript	26199297	26199465	1000	-	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;transcript_id=CHM13_chrY_T0001943;gene_id=CHM13_chrY_G0000728;Parent=CHM13_chrY_G0000728;transcript_name=CHM13_chrY_T0001943;gene_name=SEPTIN14P22;ID=CHM13_chrY_T0001943;Name=SEPTIN14P22
CHM13_chrY	CAT	exon	26199297	26199465	.	-	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;transcript_id=CHM13_chrY_T0001943;gene_id=CHM13_chrY_G0000728;Parent=CHM13_chrY_T0001943;transcript_name=CHM13_chrY_T0001943;gene_name=SEPTIN14P22;ID=exon:CHM13_chrY_T0001943:0;Name=SEPTIN14P22;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26201386	26204190	.	+	.	source_gene_common_name=CICP2;source_gene=ENSG00000233740.1;gene_id=CHM13_chrY_G0000729;gene_biotype=processed_pseudogene;gene_name=CICP2;gene_sources=liftoff;ID=CHM13_chrY_G0000729;Name=CICP2
CHM13_chrY	CAT	transcript	26201386	26204190	1000	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=CHM13_chrY_T0001944;gene_id=CHM13_chrY_G0000729;Parent=CHM13_chrY_G0000729;transcript_name=CHM13_chrY_T0001944;gene_name=CICP2;ID=CHM13_chrY_T0001944;Name=CICP2
CHM13_chrY	CAT	exon	26201386	26203165	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=CHM13_chrY_T0001944;gene_id=CHM13_chrY_G0000729;Parent=CHM13_chrY_T0001944;transcript_name=CHM13_chrY_T0001944;gene_name=CICP2;ID=exon:CHM13_chrY_T0001944:0;Name=CICP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26203166	26203231	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=CHM13_chrY_T0001944;gene_id=CHM13_chrY_G0000729;Parent=CHM13_chrY_T0001944;transcript_name=CHM13_chrY_T0001944;gene_name=CICP2;ID=intron:CHM13_chrY_T0001944:0;Name=CICP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26203232	26203653	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=CHM13_chrY_T0001944;gene_id=CHM13_chrY_G0000729;Parent=CHM13_chrY_T0001944;transcript_name=CHM13_chrY_T0001944;gene_name=CICP2;ID=exon:CHM13_chrY_T0001944:1;Name=CICP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26203654	26204063	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=CHM13_chrY_T0001944;gene_id=CHM13_chrY_G0000729;Parent=CHM13_chrY_T0001944;transcript_name=CHM13_chrY_T0001944;gene_name=CICP2;ID=intron:CHM13_chrY_T0001944:1;Name=CICP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26204064	26204190	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=CHM13_chrY_T0001944;gene_id=CHM13_chrY_G0000729;Parent=CHM13_chrY_T0001944;transcript_name=CHM13_chrY_T0001944;gene_name=CICP2;ID=exon:CHM13_chrY_T0001944:2;Name=CICP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26205502	26206283	.	-	.	source_gene_common_name=LINC00265-2P;source_gene=ENSG00000224827.1;gene_id=CHM13_chrY_G0000730;gene_biotype=processed_pseudogene;gene_name=LINC00265-2P;gene_sources=liftoff;ID=CHM13_chrY_G0000730;Name=LINC00265-2P
CHM13_chrY	CAT	transcript	26205502	26206283	1000	-	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;transcript_id=CHM13_chrY_T0001945;gene_id=CHM13_chrY_G0000730;Parent=CHM13_chrY_G0000730;transcript_name=CHM13_chrY_T0001945;gene_name=LINC00265-2P;ID=CHM13_chrY_T0001945;Name=LINC00265-2P
CHM13_chrY	CAT	exon	26205502	26206283	.	-	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;transcript_id=CHM13_chrY_T0001945;gene_id=CHM13_chrY_G0000730;Parent=CHM13_chrY_T0001945;transcript_name=CHM13_chrY_T0001945;gene_name=LINC00265-2P;ID=exon:CHM13_chrY_T0001945:0;Name=LINC00265-2P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26205534	26206437	.	-	.	source_gene_common_name=LINC00265-3P;source_gene=ENSG00000233944.1;gene_id=CHM13_chrY_G0000731;gene_biotype=processed_pseudogene;gene_name=LINC00265-3P;gene_sources=transMap_pairwise;ID=CHM13_chrY_G0000731;Name=LINC00265-3P
CHM13_chrY	CAT	transcript	26205534	26206437	1000	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447588.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;transcript_id=CHM13_chrY_T0001946;gene_id=CHM13_chrY_G0000731;Parent=CHM13_chrY_G0000731;transcript_name=CHM13_chrY_T0001946;gene_name=LINC00265-3P;ID=CHM13_chrY_T0001946;Name=LINC00265-3P
CHM13_chrY	CAT	exon	26205534	26206437	.	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447588.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;transcript_id=CHM13_chrY_T0001946;gene_id=CHM13_chrY_G0000731;Parent=CHM13_chrY_T0001946;transcript_name=CHM13_chrY_T0001946;gene_name=LINC00265-3P;ID=exon:CHM13_chrY_T0001946:0;Name=LINC00265-3P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26243536	26249694	.	+	.	source_gene_common_name=UBE2Q2P4Y;source_gene=ENSG00000225491.1;alternative_source_transcripts=ENST00000413867.1;gene_id=CHM13_chrY_G0000732;gene_biotype=unprocessed_pseudogene;gene_name=UBE2Q2P4Y;gene_sources=liftoff;ID=CHM13_chrY_G0000732;Name=UBE2Q2P4Y
CHM13_chrY	CAT	transcript	26243536	26249694	1000	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=CHM13_chrY_T0001947;gene_id=CHM13_chrY_G0000732;Parent=CHM13_chrY_G0000732;transcript_name=CHM13_chrY_T0001947;gene_name=UBE2Q2P4Y;ID=CHM13_chrY_T0001947;Name=UBE2Q2P4Y
CHM13_chrY	CAT	exon	26243536	26243637	.	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=CHM13_chrY_T0001947;gene_id=CHM13_chrY_G0000732;Parent=CHM13_chrY_T0001947;transcript_name=CHM13_chrY_T0001947;gene_name=UBE2Q2P4Y;ID=exon:CHM13_chrY_T0001947:0;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26243638	26249589	.	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=CHM13_chrY_T0001947;gene_id=CHM13_chrY_G0000732;Parent=CHM13_chrY_T0001947;transcript_name=CHM13_chrY_T0001947;gene_name=UBE2Q2P4Y;ID=intron:CHM13_chrY_T0001947:0;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26249590	26249694	.	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;alternative_source_transcripts=ENST00000413867.1;transcript_id=CHM13_chrY_T0001947;gene_id=CHM13_chrY_G0000732;Parent=CHM13_chrY_T0001947;transcript_name=CHM13_chrY_T0001947;gene_name=UBE2Q2P4Y;ID=exon:CHM13_chrY_T0001947:1;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26266940	26272954	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=ENSG00000239533.7;gene_id=CHM13_chrY_G0000733;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=CHM13_chrY_G0000733;Name=GOLGA2P2Y
CHM13_chrY	CAT	transcript	26266940	26272954	1000	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_G0000733;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=CHM13_chrY_T0001948;Name=GOLGA2P2Y
CHM13_chrY	CAT	exon	26266940	26267059	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001948:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26267060	26267672	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001948:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26267673	26267732	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001948:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26267733	26267916	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001948:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26267917	26267997	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001948:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26267998	26268638	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001948:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26268639	26268728	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001948:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26268729	26269115	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001948:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26269116	26269466	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001948:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26269467	26269764	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001948:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26269765	26269822	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001948:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26269823	26271178	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001948:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26271179	26271253	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001948:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26271254	26271673	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001948:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26271674	26271762	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001948:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26271763	26272017	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001948:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26272018	26272206	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001948:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26272207	26272295	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001948:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26272296	26272388	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001948:9;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26272389	26272470	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001948:9;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26272471	26272566	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001948:10;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26272567	26272649	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001948:10;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26272650	26272796	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001948:11;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26272797	26272897	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001948:11;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26272898	26272954	.	+	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001948;gene_id=CHM13_chrY_G0000733;Parent=CHM13_chrY_T0001948;transcript_name=CHM13_chrY_T0001948;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001948:12;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26267690	26272554	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=ENSG00000291016.1;gene_id=CHM13_chrY_G0000734;gene_biotype=lncRNA;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=CHM13_chrY_G0000734;Name=GOLGA2P2Y
CHM13_chrY	CAT	transcript	26267690	26272554	1000	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_G0000734;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=CHM13_chrY_T0001949;Name=GOLGA2P2Y
CHM13_chrY	CAT	exon	26267690	26267732	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001949:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26267733	26267918	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001949:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26267919	26267997	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001949:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26267998	26269116	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001949:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26269117	26269466	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001949:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26269467	26269764	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001949:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26269765	26269822	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001949:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26269823	26271178	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001949:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26271179	26271253	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001949:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26271254	26271673	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001949:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26271674	26271762	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001949:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26271763	26272017	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001949:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26272018	26272206	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001949:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26272207	26272295	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001949:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26272296	26272388	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001949:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26272389	26272470	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=intron:CHM13_chrY_T0001949:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26272471	26272554	.	+	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=CHM13_chrY_T0001949;gene_id=CHM13_chrY_G0000734;Parent=CHM13_chrY_T0001949;transcript_name=CHM13_chrY_T0001949;gene_name=GOLGA2P2Y;ID=exon:CHM13_chrY_T0001949:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26271305	26271563	.	+	.	source_gene_common_name=RN7SL818P;source_gene=ENSG00000274234.1;alternative_source_transcripts=ENST00000606439.2;gene_id=CHM13_chrY_G0000735;gene_biotype=misc_RNA;gene_name=RN7SL818P;gene_sources=liftoff;ID=CHM13_chrY_G0000735;Name=RN7SL818P
CHM13_chrY	CAT	transcript	26271305	26271563	1000	+	.	source_transcript=ENST00000485099.3;source_transcript_name=RN7SL818P-201;source_gene=ENSG00000274234.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000274234.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000485099.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000485099.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL818P;alternative_source_transcripts=ENST00000606439.2;transcript_id=CHM13_chrY_T0001950;gene_id=CHM13_chrY_G0000735;Parent=CHM13_chrY_G0000735;transcript_name=CHM13_chrY_T0001950;gene_name=RN7SL818P;ID=CHM13_chrY_T0001950;Name=RN7SL818P
CHM13_chrY	CAT	exon	26271305	26271563	.	+	.	source_transcript=ENST00000485099.3;source_transcript_name=RN7SL818P-201;source_gene=ENSG00000274234.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000274234.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000485099.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000485099.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL818P;alternative_source_transcripts=ENST00000606439.2;transcript_id=CHM13_chrY_T0001950;gene_id=CHM13_chrY_G0000735;Parent=CHM13_chrY_T0001950;transcript_name=CHM13_chrY_T0001950;gene_name=RN7SL818P;ID=exon:CHM13_chrY_T0001950:0;Name=RN7SL818P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26276391	26286010	.	+	.	source_gene_common_name=ENSG00000284380;source_gene=ENSG00000284380.1;gene_id=CHM13_chrY_G0000736;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000284380;gene_sources=liftoff;ID=CHM13_chrY_G0000736;Name=ENSG00000284380
CHM13_chrY	CAT	transcript	26276391	26286010	1000	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=CHM13_chrY_T0001951;gene_id=CHM13_chrY_G0000736;Parent=CHM13_chrY_G0000736;transcript_name=CHM13_chrY_T0001951;gene_name=ENSG00000284380;ID=CHM13_chrY_T0001951;Name=ENSG00000284380
CHM13_chrY	CAT	exon	26276391	26276475	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=CHM13_chrY_T0001951;gene_id=CHM13_chrY_G0000736;Parent=CHM13_chrY_T0001951;transcript_name=CHM13_chrY_T0001951;gene_name=ENSG00000284380;ID=exon:CHM13_chrY_T0001951:0;Name=ENSG00000284380;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26276476	26277896	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=CHM13_chrY_T0001951;gene_id=CHM13_chrY_G0000736;Parent=CHM13_chrY_T0001951;transcript_name=CHM13_chrY_T0001951;gene_name=ENSG00000284380;ID=intron:CHM13_chrY_T0001951:0;Name=ENSG00000284380;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26277897	26278046	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=CHM13_chrY_T0001951;gene_id=CHM13_chrY_G0000736;Parent=CHM13_chrY_T0001951;transcript_name=CHM13_chrY_T0001951;gene_name=ENSG00000284380;ID=exon:CHM13_chrY_T0001951:1;Name=ENSG00000284380;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26278047	26285848	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=CHM13_chrY_T0001951;gene_id=CHM13_chrY_G0000736;Parent=CHM13_chrY_T0001951;transcript_name=CHM13_chrY_T0001951;gene_name=ENSG00000284380;ID=intron:CHM13_chrY_T0001951:1;Name=ENSG00000284380;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26285849	26286010	.	+	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;transcript_id=CHM13_chrY_T0001951;gene_id=CHM13_chrY_G0000736;Parent=CHM13_chrY_T0001951;transcript_name=CHM13_chrY_T0001951;gene_name=ENSG00000284380;ID=exon:CHM13_chrY_T0001951:2;Name=ENSG00000284380;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26276483	26286069	.	+	.	source_gene_common_name=ENSG00000310249;source_gene=ENSG00000310249.1;gene_id=CHM13_chrY_G0000737;gene_biotype=lncRNA;gene_name=ENSG00000310249;gene_sources=liftoff;ID=CHM13_chrY_G0000737;Name=ENSG00000310249
CHM13_chrY	CAT	transcript	26276483	26286069	1000	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001952;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_G0000737;transcript_name=CHM13_chrY_T0001952;gene_name=ENSG00000310249;ID=CHM13_chrY_T0001952;Name=ENSG00000310249
CHM13_chrY	CAT	exon	26276483	26276850	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001952;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_T0001952;transcript_name=CHM13_chrY_T0001952;gene_name=ENSG00000310249;ID=exon:CHM13_chrY_T0001952:0;Name=ENSG00000310249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26276851	26277896	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001952;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_T0001952;transcript_name=CHM13_chrY_T0001952;gene_name=ENSG00000310249;ID=intron:CHM13_chrY_T0001952:0;Name=ENSG00000310249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26277897	26278046	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001952;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_T0001952;transcript_name=CHM13_chrY_T0001952;gene_name=ENSG00000310249;ID=exon:CHM13_chrY_T0001952:1;Name=ENSG00000310249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26278047	26285848	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001952;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_T0001952;transcript_name=CHM13_chrY_T0001952;gene_name=ENSG00000310249;ID=intron:CHM13_chrY_T0001952:1;Name=ENSG00000310249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26285849	26286069	.	+	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001952;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_T0001952;transcript_name=CHM13_chrY_T0001952;gene_name=ENSG00000310249;ID=exon:CHM13_chrY_T0001952:2;Name=ENSG00000310249;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26276739	26286069	1000	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001953;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_G0000737;transcript_name=CHM13_chrY_T0001953;gene_name=ENSG00000310249;ID=CHM13_chrY_T0001953;Name=ENSG00000310249
CHM13_chrY	CAT	exon	26276739	26276850	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001953;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_T0001953;transcript_name=CHM13_chrY_T0001953;gene_name=ENSG00000310249;ID=exon:CHM13_chrY_T0001953:0;Name=ENSG00000310249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26276851	26277867	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001953;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_T0001953;transcript_name=CHM13_chrY_T0001953;gene_name=ENSG00000310249;ID=intron:CHM13_chrY_T0001953:0;Name=ENSG00000310249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26277868	26278046	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001953;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_T0001953;transcript_name=CHM13_chrY_T0001953;gene_name=ENSG00000310249;ID=exon:CHM13_chrY_T0001953:1;Name=ENSG00000310249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26278047	26285848	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001953;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_T0001953;transcript_name=CHM13_chrY_T0001953;gene_name=ENSG00000310249;ID=intron:CHM13_chrY_T0001953:1;Name=ENSG00000310249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26285849	26286069	.	+	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001953;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_T0001953;transcript_name=CHM13_chrY_T0001953;gene_name=ENSG00000310249;ID=exon:CHM13_chrY_T0001953:2;Name=ENSG00000310249;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26277867	26285948	1000	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001954;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_G0000737;transcript_name=CHM13_chrY_T0001954;gene_name=ENSG00000310249;ID=CHM13_chrY_T0001954;Name=ENSG00000310249
CHM13_chrY	CAT	exon	26277867	26278046	.	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001954;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_T0001954;transcript_name=CHM13_chrY_T0001954;gene_name=ENSG00000310249;ID=exon:CHM13_chrY_T0001954:0;Name=ENSG00000310249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26278047	26285848	.	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001954;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_T0001954;transcript_name=CHM13_chrY_T0001954;gene_name=ENSG00000310249;ID=intron:CHM13_chrY_T0001954:0;Name=ENSG00000310249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26285849	26285948	.	+	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=CHM13_chrY_T0001954;gene_id=CHM13_chrY_G0000737;Parent=CHM13_chrY_T0001954;transcript_name=CHM13_chrY_T0001954;gene_name=ENSG00000310249;ID=exon:CHM13_chrY_T0001954:1;Name=ENSG00000310249;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26290658	26296017	.	+	.	source_gene_common_name=CSPG4P3Y;source_gene=ENSG00000172342.5;gene_id=CHM13_chrY_G0000738;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=CSPG4P3Y;gene_sources=liftoff;ID=CHM13_chrY_G0000738;Name=CSPG4P3Y
CHM13_chrY	CAT	transcript	26290658	26296017	1000	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=CHM13_chrY_T0001955;gene_id=CHM13_chrY_G0000738;Parent=CHM13_chrY_G0000738;transcript_name=CHM13_chrY_T0001955;gene_name=CSPG4P3Y;ID=CHM13_chrY_T0001955;Name=CSPG4P3Y
CHM13_chrY	CAT	exon	26290658	26290821	.	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=CHM13_chrY_T0001955;gene_id=CHM13_chrY_G0000738;Parent=CHM13_chrY_T0001955;transcript_name=CHM13_chrY_T0001955;gene_name=CSPG4P3Y;ID=exon:CHM13_chrY_T0001955:0;Name=CSPG4P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26290822	26292457	.	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=CHM13_chrY_T0001955;gene_id=CHM13_chrY_G0000738;Parent=CHM13_chrY_T0001955;transcript_name=CHM13_chrY_T0001955;gene_name=CSPG4P3Y;ID=intron:CHM13_chrY_T0001955:0;Name=CSPG4P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26292458	26296017	.	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=CHM13_chrY_T0001955;gene_id=CHM13_chrY_G0000738;Parent=CHM13_chrY_T0001955;transcript_name=CHM13_chrY_T0001955;gene_name=CSPG4P3Y;ID=exon:CHM13_chrY_T0001955:1;Name=CSPG4P3Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26295295	26299092	.	+	.	source_gene_common_name=CSPG4P2Y;source_gene=ENSG00000244231.1;gene_id=CHM13_chrY_G0000739;gene_biotype=lncRNA;gene_name=CSPG4P2Y;gene_sources=liftoff;ID=CHM13_chrY_G0000739;Name=CSPG4P2Y
CHM13_chrY	CAT	transcript	26295295	26299092	1000	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=CHM13_chrY_T0001956;gene_id=CHM13_chrY_G0000739;Parent=CHM13_chrY_G0000739;transcript_name=CHM13_chrY_T0001956;gene_name=CSPG4P2Y;ID=CHM13_chrY_T0001956;Name=CSPG4P2Y
CHM13_chrY	CAT	exon	26295295	26296017	.	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=CHM13_chrY_T0001956;gene_id=CHM13_chrY_G0000739;Parent=CHM13_chrY_T0001956;transcript_name=CHM13_chrY_T0001956;gene_name=CSPG4P2Y;ID=exon:CHM13_chrY_T0001956:0;Name=CSPG4P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26296018	26299020	.	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=CHM13_chrY_T0001956;gene_id=CHM13_chrY_G0000739;Parent=CHM13_chrY_T0001956;transcript_name=CHM13_chrY_T0001956;gene_name=CSPG4P2Y;ID=intron:CHM13_chrY_T0001956:0;Name=CSPG4P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26299021	26299092	.	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=CHM13_chrY_T0001956;gene_id=CHM13_chrY_G0000739;Parent=CHM13_chrY_T0001956;transcript_name=CHM13_chrY_T0001956;gene_name=CSPG4P2Y;ID=exon:CHM13_chrY_T0001956:1;Name=CSPG4P2Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26299021	26303210	.	+	.	source_gene_common_name=DNM1P24;source_gene=ENSG00000242854.1;gene_id=CHM13_chrY_G0000740;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=DNM1P24;gene_sources=liftoff;ID=CHM13_chrY_G0000740;Name=DNM1P24
CHM13_chrY	CAT	transcript	26299021	26303210	1000	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=CHM13_chrY_T0001957;gene_id=CHM13_chrY_G0000740;Parent=CHM13_chrY_G0000740;transcript_name=CHM13_chrY_T0001957;gene_name=DNM1P24;ID=CHM13_chrY_T0001957;Name=DNM1P24
CHM13_chrY	CAT	exon	26299021	26299252	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=CHM13_chrY_T0001957;gene_id=CHM13_chrY_G0000740;Parent=CHM13_chrY_T0001957;transcript_name=CHM13_chrY_T0001957;gene_name=DNM1P24;ID=exon:CHM13_chrY_T0001957:0;Name=DNM1P24;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26299253	26299503	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=CHM13_chrY_T0001957;gene_id=CHM13_chrY_G0000740;Parent=CHM13_chrY_T0001957;transcript_name=CHM13_chrY_T0001957;gene_name=DNM1P24;ID=intron:CHM13_chrY_T0001957:0;Name=DNM1P24;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26299504	26299708	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=CHM13_chrY_T0001957;gene_id=CHM13_chrY_G0000740;Parent=CHM13_chrY_T0001957;transcript_name=CHM13_chrY_T0001957;gene_name=DNM1P24;ID=exon:CHM13_chrY_T0001957:1;Name=DNM1P24;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26299709	26303157	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=CHM13_chrY_T0001957;gene_id=CHM13_chrY_G0000740;Parent=CHM13_chrY_T0001957;transcript_name=CHM13_chrY_T0001957;gene_name=DNM1P24;ID=intron:CHM13_chrY_T0001957:1;Name=DNM1P24;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26303158	26303210	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=CHM13_chrY_T0001957;gene_id=CHM13_chrY_G0000740;Parent=CHM13_chrY_T0001957;transcript_name=CHM13_chrY_T0001957;gene_name=DNM1P24;ID=exon:CHM13_chrY_T0001957:2;Name=DNM1P24;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26299455	26300049	.	-	.	source_gene_common_name=ENSG00000230977;source_gene=ENSG00000230977.1;gene_id=CHM13_chrY_G0000741;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000230977;gene_sources=liftoff;ID=CHM13_chrY_G0000741;Name=ENSG00000230977
CHM13_chrY	CAT	transcript	26299455	26300049	1000	-	.	source_transcript=ENST00000418278.1;source_transcript_name=ENST00000418278;source_gene=ENSG00000230977.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230977.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418278.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230977;transcript_id=CHM13_chrY_T0001958;gene_id=CHM13_chrY_G0000741;Parent=CHM13_chrY_G0000741;transcript_name=CHM13_chrY_T0001958;gene_name=ENSG00000230977;ID=CHM13_chrY_T0001958;Name=ENSG00000230977
CHM13_chrY	CAT	exon	26299455	26300049	.	-	.	source_transcript=ENST00000418278.1;source_transcript_name=ENST00000418278;source_gene=ENSG00000230977.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230977.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418278.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230977;transcript_id=CHM13_chrY_T0001958;gene_id=CHM13_chrY_G0000741;Parent=CHM13_chrY_T0001958;transcript_name=CHM13_chrY_T0001958;gene_name=ENSG00000230977;ID=exon:CHM13_chrY_T0001958:0;Name=ENSG00000230977;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26305317	26310901	.	-	.	source_gene_common_name=ENSG00000307363;source_gene=ENSG00000307363.1;gene_id=CHM13_chrY_G0000742;gene_biotype=lncRNA;gene_name=ENSG00000307363;gene_sources=liftoff;ID=CHM13_chrY_G0000742;Name=ENSG00000307363
CHM13_chrY	CAT	transcript	26305317	26310728	1000	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001959;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001959;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001959;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26305317	26308171	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001959;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001959;transcript_name=CHM13_chrY_T0001959;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001959:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001959;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001959;transcript_name=CHM13_chrY_T0001959;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001959:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001959;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001959;transcript_name=CHM13_chrY_T0001959;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001959:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309535	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001959;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001959;transcript_name=CHM13_chrY_T0001959;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001959:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309536	26309596	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001959;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001959;transcript_name=CHM13_chrY_T0001959;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001959:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26309863	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001959;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001959;transcript_name=CHM13_chrY_T0001959;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001959:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309864	26310728	.	-	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001959;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001959;transcript_name=CHM13_chrY_T0001959;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001959:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26307604	26310471	1000	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001960;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001960;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001960;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26307604	26308171	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001960;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001960;transcript_name=CHM13_chrY_T0001960;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001960:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001960;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001960;transcript_name=CHM13_chrY_T0001960;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001960:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001960;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001960;transcript_name=CHM13_chrY_T0001960;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001960:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309518	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001960;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001960;transcript_name=CHM13_chrY_T0001960;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001960:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309519	26309596	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001960;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001960;transcript_name=CHM13_chrY_T0001960;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001960:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26309863	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001960;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001960;transcript_name=CHM13_chrY_T0001960;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001960:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309864	26310471	.	-	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001960;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001960;transcript_name=CHM13_chrY_T0001960;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001960:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308005	26308730	1000	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001961;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001961;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001961;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308005	26308171	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001961;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001961;transcript_name=CHM13_chrY_T0001961;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001961:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001961;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001961;transcript_name=CHM13_chrY_T0001961;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001961:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308730	.	-	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001961;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001961;transcript_name=CHM13_chrY_T0001961;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001961:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308006	26309881	1000	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001962;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001962;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001962;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308006	26308171	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001962;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001962;transcript_name=CHM13_chrY_T0001962;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001962:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001962;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001962;transcript_name=CHM13_chrY_T0001962;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001962:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001962;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001962;transcript_name=CHM13_chrY_T0001962;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001962:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309518	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001962;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001962;transcript_name=CHM13_chrY_T0001962;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001962:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309519	26309596	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001962;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001962;transcript_name=CHM13_chrY_T0001962;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001962:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26309707	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001962;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001962;transcript_name=CHM13_chrY_T0001962;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001962:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309708	26309881	.	-	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001962;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001962;transcript_name=CHM13_chrY_T0001962;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001962:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308006	26309881	1000	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001963;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001963;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001963;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308006	26308171	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001963;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001963;transcript_name=CHM13_chrY_T0001963;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001963:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001963;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001963;transcript_name=CHM13_chrY_T0001963;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001963:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001963;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001963;transcript_name=CHM13_chrY_T0001963;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001963:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309357	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001963;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001963;transcript_name=CHM13_chrY_T0001963;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001963:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309358	26309596	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001963;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001963;transcript_name=CHM13_chrY_T0001963;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001963:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26309707	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001963;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001963;transcript_name=CHM13_chrY_T0001963;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001963:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309708	26309881	.	-	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001963;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001963;transcript_name=CHM13_chrY_T0001963;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001963:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308006	26310196	1000	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001964;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001964;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001964;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308006	26308171	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001964;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001964;transcript_name=CHM13_chrY_T0001964;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001964:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001964;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001964;transcript_name=CHM13_chrY_T0001964;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001964:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001964;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001964;transcript_name=CHM13_chrY_T0001964;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001964:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309357	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001964;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001964;transcript_name=CHM13_chrY_T0001964;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001964:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309358	26309596	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001964;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001964;transcript_name=CHM13_chrY_T0001964;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001964:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26310034	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001964;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001964;transcript_name=CHM13_chrY_T0001964;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001964:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26310035	26310196	.	-	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001964;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001964;transcript_name=CHM13_chrY_T0001964;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001964:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308006	26309975	1000	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001965;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001965;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001965;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308006	26308171	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001965;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001965;transcript_name=CHM13_chrY_T0001965;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001965:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001965;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001965;transcript_name=CHM13_chrY_T0001965;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001965:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001965;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001965;transcript_name=CHM13_chrY_T0001965;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001965:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309535	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001965;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001965;transcript_name=CHM13_chrY_T0001965;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001965:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309536	26309596	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001965;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001965;transcript_name=CHM13_chrY_T0001965;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001965:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26309707	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001965;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001965;transcript_name=CHM13_chrY_T0001965;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001965:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309708	26309975	.	-	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001965;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001965;transcript_name=CHM13_chrY_T0001965;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001965:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308006	26310887	1000	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001966;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001966;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001966;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308006	26308171	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001966;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001966;transcript_name=CHM13_chrY_T0001966;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001966:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001966;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001966;transcript_name=CHM13_chrY_T0001966;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001966:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001966;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001966;transcript_name=CHM13_chrY_T0001966;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001966:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309535	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001966;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001966;transcript_name=CHM13_chrY_T0001966;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001966:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309536	26309596	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001966;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001966;transcript_name=CHM13_chrY_T0001966;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001966:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26310820	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001966;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001966;transcript_name=CHM13_chrY_T0001966;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001966:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26310821	26310887	.	-	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001966;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001966;transcript_name=CHM13_chrY_T0001966;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001966:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308006	26310307	1000	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001967;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001967;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001967;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308006	26308171	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001967;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001967;transcript_name=CHM13_chrY_T0001967;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001967:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001967;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001967;transcript_name=CHM13_chrY_T0001967;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001967:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001967;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001967;transcript_name=CHM13_chrY_T0001967;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001967:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309535	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001967;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001967;transcript_name=CHM13_chrY_T0001967;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001967:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309536	26309596	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001967;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001967;transcript_name=CHM13_chrY_T0001967;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001967:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26310134	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001967;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001967;transcript_name=CHM13_chrY_T0001967;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001967:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26310135	26310307	.	-	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001967;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001967;transcript_name=CHM13_chrY_T0001967;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001967:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308006	26310299	1000	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001968;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001968;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001968;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308006	26308171	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001968;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001968;transcript_name=CHM13_chrY_T0001968;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001968:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001968;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001968;transcript_name=CHM13_chrY_T0001968;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001968:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001968;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001968;transcript_name=CHM13_chrY_T0001968;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001968:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309357	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001968;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001968;transcript_name=CHM13_chrY_T0001968;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001968:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309358	26309596	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001968;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001968;transcript_name=CHM13_chrY_T0001968;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001968:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26310134	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001968;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001968;transcript_name=CHM13_chrY_T0001968;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001968:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26310135	26310299	.	-	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001968;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001968;transcript_name=CHM13_chrY_T0001968;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001968:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308006	26310217	1000	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001969;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001969;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001969;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308006	26308171	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001969;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001969;transcript_name=CHM13_chrY_T0001969;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001969:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001969;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001969;transcript_name=CHM13_chrY_T0001969;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001969:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001969;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001969;transcript_name=CHM13_chrY_T0001969;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001969:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309518	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001969;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001969;transcript_name=CHM13_chrY_T0001969;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001969:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309519	26309596	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001969;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001969;transcript_name=CHM13_chrY_T0001969;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001969:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26310034	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001969;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001969;transcript_name=CHM13_chrY_T0001969;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001969:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26310035	26310217	.	-	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001969;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001969;transcript_name=CHM13_chrY_T0001969;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001969:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308006	26310251	1000	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001970;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001970;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001970;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308006	26308171	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001970;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001970;transcript_name=CHM13_chrY_T0001970;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001970:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001970;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001970;transcript_name=CHM13_chrY_T0001970;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001970:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001970;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001970;transcript_name=CHM13_chrY_T0001970;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001970:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309518	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001970;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001970;transcript_name=CHM13_chrY_T0001970;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001970:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309519	26309596	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001970;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001970;transcript_name=CHM13_chrY_T0001970;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001970:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26310134	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001970;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001970;transcript_name=CHM13_chrY_T0001970;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001970:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26310135	26310251	.	-	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001970;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001970;transcript_name=CHM13_chrY_T0001970;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001970:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308006	26310217	1000	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001971;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001971;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001971;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308006	26308171	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001971;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001971;transcript_name=CHM13_chrY_T0001971;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001971:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001971;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001971;transcript_name=CHM13_chrY_T0001971;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001971:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001971;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001971;transcript_name=CHM13_chrY_T0001971;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001971:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309535	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001971;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001971;transcript_name=CHM13_chrY_T0001971;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001971:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309536	26309596	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001971;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001971;transcript_name=CHM13_chrY_T0001971;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001971:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26310034	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001971;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001971;transcript_name=CHM13_chrY_T0001971;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001971:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26310035	26310217	.	-	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001971;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001971;transcript_name=CHM13_chrY_T0001971;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001971:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308006	26310098	1000	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001972;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001972;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001972;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308006	26308171	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001972;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001972;transcript_name=CHM13_chrY_T0001972;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001972:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001972;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001972;transcript_name=CHM13_chrY_T0001972;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001972:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001972;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001972;transcript_name=CHM13_chrY_T0001972;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001972:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309357	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001972;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001972;transcript_name=CHM13_chrY_T0001972;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001972:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309358	26309596	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001972;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001972;transcript_name=CHM13_chrY_T0001972;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001972:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26309863	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001972;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001972;transcript_name=CHM13_chrY_T0001972;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001972:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309864	26310098	.	-	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001972;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001972;transcript_name=CHM13_chrY_T0001972;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001972:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308006	26310901	1000	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001973;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001973;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001973;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308006	26308171	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001973;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001973;transcript_name=CHM13_chrY_T0001973;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001973:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001973;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001973;transcript_name=CHM13_chrY_T0001973;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001973:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001973;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001973;transcript_name=CHM13_chrY_T0001973;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001973:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309357	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001973;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001973;transcript_name=CHM13_chrY_T0001973;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001973:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309358	26309596	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001973;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001973;transcript_name=CHM13_chrY_T0001973;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001973:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26310820	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001973;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001973;transcript_name=CHM13_chrY_T0001973;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001973:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26310821	26310901	.	-	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001973;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001973;transcript_name=CHM13_chrY_T0001973;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001973:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26308008	26310137	1000	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001974;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_G0000742;transcript_name=CHM13_chrY_T0001974;gene_name=ENSG00000307363;ID=CHM13_chrY_T0001974;Name=ENSG00000307363
CHM13_chrY	CAT	exon	26308008	26308171	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001974;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001974;transcript_name=CHM13_chrY_T0001974;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001974:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308172	26308380	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001974;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001974;transcript_name=CHM13_chrY_T0001974;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001974:0;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308381	26308495	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001974;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001974;transcript_name=CHM13_chrY_T0001974;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001974:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308496	26309357	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001974;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001974;transcript_name=CHM13_chrY_T0001974;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001974:1;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309358	26309596	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001974;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001974;transcript_name=CHM13_chrY_T0001974;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001974:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26309948	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001974;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001974;transcript_name=CHM13_chrY_T0001974;gene_name=ENSG00000307363;ID=intron:CHM13_chrY_T0001974:2;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309949	26310137	.	-	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=CHM13_chrY_T0001974;gene_id=CHM13_chrY_G0000742;Parent=CHM13_chrY_T0001974;transcript_name=CHM13_chrY_T0001974;gene_name=ENSG00000307363;ID=exon:CHM13_chrY_T0001974:3;Name=ENSG00000307363;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26308039	26314346	.	-	.	source_gene_common_name=GOLGA6L16P;source_gene=ENSG00000197092.5;gene_id=CHM13_chrY_G0000743;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA6L16P;gene_sources=liftoff;ID=CHM13_chrY_G0000743;Name=GOLGA6L16P
CHM13_chrY	CAT	transcript	26308039	26314346	1000	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_G0000743;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=CHM13_chrY_T0001975;Name=GOLGA6L16P
CHM13_chrY	CAT	exon	26308039	26308170	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001975:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308171	26308379	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001975:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26308380	26308503	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001975:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26308504	26309525	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001975:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309526	26309596	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001975:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26309597	26309863	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001975:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26309864	26310433	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001975:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26310434	26310838	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001975:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26310839	26310895	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001975:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26310896	26311551	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001975:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26311552	26311632	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001975:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26311633	26311817	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001975:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26311818	26311877	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001975:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26311878	26312499	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001975:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26312500	26312619	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001975:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26312620	26314262	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=intron:CHM13_chrY_T0001975:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26314263	26314346	.	-	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=CHM13_chrY_T0001975;gene_id=CHM13_chrY_G0000743;Parent=CHM13_chrY_T0001975;transcript_name=CHM13_chrY_T0001975;gene_name=GOLGA6L16P;ID=exon:CHM13_chrY_T0001975:8;Name=GOLGA6L16P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26324689	26340177	.	-	.	source_gene_common_name=ENSG00000235981;source_gene=ENSG00000235981.2;gene_id=CHM13_chrY_G0000744;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000235981;gene_sources=liftoff;ID=CHM13_chrY_G0000744;Name=ENSG00000235981
CHM13_chrY	CAT	transcript	26324689	26340177	1000	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=CHM13_chrY_T0001976;gene_id=CHM13_chrY_G0000744;Parent=CHM13_chrY_G0000744;transcript_name=CHM13_chrY_T0001976;gene_name=ENSG00000235981;ID=CHM13_chrY_T0001976;Name=ENSG00000235981
CHM13_chrY	CAT	exon	26324689	26324784	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=CHM13_chrY_T0001976;gene_id=CHM13_chrY_G0000744;Parent=CHM13_chrY_T0001976;transcript_name=CHM13_chrY_T0001976;gene_name=ENSG00000235981;ID=exon:CHM13_chrY_T0001976:0;Name=ENSG00000235981;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26324785	26325513	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=CHM13_chrY_T0001976;gene_id=CHM13_chrY_G0000744;Parent=CHM13_chrY_T0001976;transcript_name=CHM13_chrY_T0001976;gene_name=ENSG00000235981;ID=intron:CHM13_chrY_T0001976:0;Name=ENSG00000235981;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26325514	26325562	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=CHM13_chrY_T0001976;gene_id=CHM13_chrY_G0000744;Parent=CHM13_chrY_T0001976;transcript_name=CHM13_chrY_T0001976;gene_name=ENSG00000235981;ID=exon:CHM13_chrY_T0001976:1;Name=ENSG00000235981;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26325563	26332069	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=CHM13_chrY_T0001976;gene_id=CHM13_chrY_G0000744;Parent=CHM13_chrY_T0001976;transcript_name=CHM13_chrY_T0001976;gene_name=ENSG00000235981;ID=intron:CHM13_chrY_T0001976:1;Name=ENSG00000235981;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26332070	26332128	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=CHM13_chrY_T0001976;gene_id=CHM13_chrY_G0000744;Parent=CHM13_chrY_T0001976;transcript_name=CHM13_chrY_T0001976;gene_name=ENSG00000235981;ID=exon:CHM13_chrY_T0001976:2;Name=ENSG00000235981;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26332129	26336416	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=CHM13_chrY_T0001976;gene_id=CHM13_chrY_G0000744;Parent=CHM13_chrY_T0001976;transcript_name=CHM13_chrY_T0001976;gene_name=ENSG00000235981;ID=intron:CHM13_chrY_T0001976:2;Name=ENSG00000235981;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26336417	26336501	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=CHM13_chrY_T0001976;gene_id=CHM13_chrY_G0000744;Parent=CHM13_chrY_T0001976;transcript_name=CHM13_chrY_T0001976;gene_name=ENSG00000235981;ID=exon:CHM13_chrY_T0001976:3;Name=ENSG00000235981;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26336502	26337594	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=CHM13_chrY_T0001976;gene_id=CHM13_chrY_G0000744;Parent=CHM13_chrY_T0001976;transcript_name=CHM13_chrY_T0001976;gene_name=ENSG00000235981;ID=intron:CHM13_chrY_T0001976:3;Name=ENSG00000235981;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26337595	26337679	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=CHM13_chrY_T0001976;gene_id=CHM13_chrY_G0000744;Parent=CHM13_chrY_T0001976;transcript_name=CHM13_chrY_T0001976;gene_name=ENSG00000235981;ID=exon:CHM13_chrY_T0001976:4;Name=ENSG00000235981;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26337680	26340039	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=CHM13_chrY_T0001976;gene_id=CHM13_chrY_G0000744;Parent=CHM13_chrY_T0001976;transcript_name=CHM13_chrY_T0001976;gene_name=ENSG00000235981;ID=intron:CHM13_chrY_T0001976:4;Name=ENSG00000235981;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26340040	26340177	.	-	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=CHM13_chrY_T0001976;gene_id=CHM13_chrY_G0000744;Parent=CHM13_chrY_T0001976;transcript_name=CHM13_chrY_T0001976;gene_name=ENSG00000235981;ID=exon:CHM13_chrY_T0001976:5;Name=ENSG00000235981;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26329169	26345149	.	-	.	source_gene_common_name=ENSG00000299288;source_gene=ENSG00000299288.1;gene_id=CHM13_chrY_G0000745;gene_biotype=lncRNA;gene_name=ENSG00000299288;gene_sources=liftoff;ID=CHM13_chrY_G0000745;Name=ENSG00000299288
CHM13_chrY	CAT	transcript	26329169	26344369	1000	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001977;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_G0000745;transcript_name=CHM13_chrY_T0001977;gene_name=ENSG00000299288;ID=CHM13_chrY_T0001977;Name=ENSG00000299288
CHM13_chrY	CAT	exon	26329169	26330187	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001977;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001977;transcript_name=CHM13_chrY_T0001977;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001977:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26330188	26336416	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001977;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001977;transcript_name=CHM13_chrY_T0001977;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001977:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26336417	26336501	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001977;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001977;transcript_name=CHM13_chrY_T0001977;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001977:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26336502	26340039	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001977;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001977;transcript_name=CHM13_chrY_T0001977;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001977:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26340040	26340177	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001977;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001977;transcript_name=CHM13_chrY_T0001977;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001977:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26340178	26344133	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001977;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001977;transcript_name=CHM13_chrY_T0001977;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001977:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26344134	26344369	.	-	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001977;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001977;transcript_name=CHM13_chrY_T0001977;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001977:3;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26329169	26344594	1000	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001978;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_G0000745;transcript_name=CHM13_chrY_T0001978;gene_name=ENSG00000299288;ID=CHM13_chrY_T0001978;Name=ENSG00000299288
CHM13_chrY	CAT	exon	26329169	26330187	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001978;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001978;transcript_name=CHM13_chrY_T0001978;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001978:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26330188	26336416	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001978;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001978;transcript_name=CHM13_chrY_T0001978;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001978:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26336417	26336501	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001978;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001978;transcript_name=CHM13_chrY_T0001978;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001978:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26336502	26337594	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001978;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001978;transcript_name=CHM13_chrY_T0001978;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001978:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26337595	26337679	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001978;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001978;transcript_name=CHM13_chrY_T0001978;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001978:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26337680	26340055	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001978;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001978;transcript_name=CHM13_chrY_T0001978;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001978:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26340056	26340177	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001978;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001978;transcript_name=CHM13_chrY_T0001978;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001978:3;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26340178	26344133	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001978;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001978;transcript_name=CHM13_chrY_T0001978;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001978:3;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26344134	26344594	.	-	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001978;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001978;transcript_name=CHM13_chrY_T0001978;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001978:4;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26329752	26345149	1000	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001979;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_G0000745;transcript_name=CHM13_chrY_T0001979;gene_name=ENSG00000299288;ID=CHM13_chrY_T0001979;Name=ENSG00000299288
CHM13_chrY	CAT	exon	26329752	26330187	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001979;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001979;transcript_name=CHM13_chrY_T0001979;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001979:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26330188	26336416	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001979;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001979;transcript_name=CHM13_chrY_T0001979;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001979:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26336417	26336501	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001979;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001979;transcript_name=CHM13_chrY_T0001979;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001979:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26336502	26340039	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001979;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001979;transcript_name=CHM13_chrY_T0001979;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001979:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26340040	26340177	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001979;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001979;transcript_name=CHM13_chrY_T0001979;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001979:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26340178	26345044	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001979;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001979;transcript_name=CHM13_chrY_T0001979;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001979:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26345045	26345149	.	-	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001979;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001979;transcript_name=CHM13_chrY_T0001979;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001979:3;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26329752	26345149	1000	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001980;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_G0000745;transcript_name=CHM13_chrY_T0001980;gene_name=ENSG00000299288;ID=CHM13_chrY_T0001980;Name=ENSG00000299288
CHM13_chrY	CAT	exon	26329752	26330187	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001980;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001980;transcript_name=CHM13_chrY_T0001980;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001980:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26330188	26336416	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001980;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001980;transcript_name=CHM13_chrY_T0001980;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001980:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26336417	26336501	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001980;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001980;transcript_name=CHM13_chrY_T0001980;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001980:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26336502	26337594	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001980;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001980;transcript_name=CHM13_chrY_T0001980;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001980:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26337595	26337679	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001980;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001980;transcript_name=CHM13_chrY_T0001980;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001980:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26337680	26340055	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001980;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001980;transcript_name=CHM13_chrY_T0001980;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001980:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26340056	26340177	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001980;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001980;transcript_name=CHM13_chrY_T0001980;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001980:3;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26340178	26344133	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001980;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001980;transcript_name=CHM13_chrY_T0001980;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001980:3;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26344134	26344296	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001980;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001980;transcript_name=CHM13_chrY_T0001980;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001980:4;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26344297	26345044	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001980;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001980;transcript_name=CHM13_chrY_T0001980;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001980:4;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26345045	26345149	.	-	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001980;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001980;transcript_name=CHM13_chrY_T0001980;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001980:5;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26329752	26345149	1000	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001981;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_G0000745;transcript_name=CHM13_chrY_T0001981;gene_name=ENSG00000299288;ID=CHM13_chrY_T0001981;Name=ENSG00000299288
CHM13_chrY	CAT	exon	26329752	26330187	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001981;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001981;transcript_name=CHM13_chrY_T0001981;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001981:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26330188	26336416	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001981;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001981;transcript_name=CHM13_chrY_T0001981;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001981:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26336417	26336501	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001981;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001981;transcript_name=CHM13_chrY_T0001981;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001981:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26336502	26337594	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001981;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001981;transcript_name=CHM13_chrY_T0001981;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001981:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26337595	26337679	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001981;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001981;transcript_name=CHM13_chrY_T0001981;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001981:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26337680	26340039	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001981;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001981;transcript_name=CHM13_chrY_T0001981;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001981:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26340040	26340177	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001981;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001981;transcript_name=CHM13_chrY_T0001981;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001981:3;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26340178	26344133	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001981;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001981;transcript_name=CHM13_chrY_T0001981;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001981:3;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26344134	26344296	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001981;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001981;transcript_name=CHM13_chrY_T0001981;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001981:4;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26344297	26345044	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001981;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001981;transcript_name=CHM13_chrY_T0001981;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001981:4;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26345045	26345149	.	-	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001981;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001981;transcript_name=CHM13_chrY_T0001981;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001981:5;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26329765	26345142	1000	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001982;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_G0000745;transcript_name=CHM13_chrY_T0001982;gene_name=ENSG00000299288;ID=CHM13_chrY_T0001982;Name=ENSG00000299288
CHM13_chrY	CAT	exon	26329765	26330187	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001982;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001982;transcript_name=CHM13_chrY_T0001982;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001982:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26330188	26336416	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001982;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001982;transcript_name=CHM13_chrY_T0001982;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001982:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26336417	26336501	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001982;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001982;transcript_name=CHM13_chrY_T0001982;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001982:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26336502	26340039	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001982;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001982;transcript_name=CHM13_chrY_T0001982;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001982:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26340040	26340177	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001982;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001982;transcript_name=CHM13_chrY_T0001982;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001982:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26340178	26344133	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001982;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001982;transcript_name=CHM13_chrY_T0001982;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001982:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26344134	26344296	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001982;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001982;transcript_name=CHM13_chrY_T0001982;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001982:3;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26344297	26345044	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001982;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001982;transcript_name=CHM13_chrY_T0001982;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001982:3;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26345045	26345142	.	-	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001982;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001982;transcript_name=CHM13_chrY_T0001982;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001982:4;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26329765	26344545	1000	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001983;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_G0000745;transcript_name=CHM13_chrY_T0001983;gene_name=ENSG00000299288;ID=CHM13_chrY_T0001983;Name=ENSG00000299288
CHM13_chrY	CAT	exon	26329765	26330187	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001983;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001983;transcript_name=CHM13_chrY_T0001983;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001983:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26330188	26336416	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001983;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001983;transcript_name=CHM13_chrY_T0001983;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001983:0;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26336417	26336501	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001983;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001983;transcript_name=CHM13_chrY_T0001983;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001983:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26336502	26340055	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001983;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001983;transcript_name=CHM13_chrY_T0001983;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001983:1;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26340056	26340177	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001983;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001983;transcript_name=CHM13_chrY_T0001983;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001983:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26340178	26344133	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001983;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001983;transcript_name=CHM13_chrY_T0001983;gene_name=ENSG00000299288;ID=intron:CHM13_chrY_T0001983:2;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26344134	26344545	.	-	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=CHM13_chrY_T0001983;gene_id=CHM13_chrY_G0000745;Parent=CHM13_chrY_T0001983;transcript_name=CHM13_chrY_T0001983;gene_name=ENSG00000299288;ID=exon:CHM13_chrY_T0001983:3;Name=ENSG00000299288;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26376510	26378421	.	-	.	source_gene_common_name=CDY18P;source_gene=ENSG00000232205.1;gene_id=CHM13_chrY_G0000746;gene_biotype=unprocessed_pseudogene;gene_name=CDY18P;gene_sources=liftoff;ID=CHM13_chrY_G0000746;Name=CDY18P
CHM13_chrY	CAT	transcript	26376510	26378421	1000	-	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;transcript_id=CHM13_chrY_T0001984;gene_id=CHM13_chrY_G0000746;Parent=CHM13_chrY_G0000746;transcript_name=CHM13_chrY_T0001984;gene_name=CDY18P;ID=CHM13_chrY_T0001984;Name=CDY18P
CHM13_chrY	CAT	exon	26376510	26377924	.	-	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;transcript_id=CHM13_chrY_T0001984;gene_id=CHM13_chrY_G0000746;Parent=CHM13_chrY_T0001984;transcript_name=CHM13_chrY_T0001984;gene_name=CDY18P;ID=exon:CHM13_chrY_T0001984:0;Name=CDY18P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26377925	26378227	.	-	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;transcript_id=CHM13_chrY_T0001984;gene_id=CHM13_chrY_G0000746;Parent=CHM13_chrY_T0001984;transcript_name=CHM13_chrY_T0001984;gene_name=CDY18P;ID=intron:CHM13_chrY_T0001984:0;Name=CDY18P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26378228	26378421	.	-	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;transcript_id=CHM13_chrY_T0001984;gene_id=CHM13_chrY_G0000746;Parent=CHM13_chrY_T0001984;transcript_name=CHM13_chrY_T0001984;gene_name=CDY18P;ID=exon:CHM13_chrY_T0001984:1;Name=CDY18P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26392180	26400821	.	+	.	source_gene_common_name=USP9YP31;source_gene=ENSG00000229250.1;gene_id=CHM13_chrY_G0000747;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP31;gene_sources=liftoff;ID=CHM13_chrY_G0000747;Name=USP9YP31
CHM13_chrY	CAT	transcript	26392180	26400821	1000	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=CHM13_chrY_T0001985;gene_id=CHM13_chrY_G0000747;Parent=CHM13_chrY_G0000747;transcript_name=CHM13_chrY_T0001985;gene_name=USP9YP31;ID=CHM13_chrY_T0001985;Name=USP9YP31
CHM13_chrY	CAT	exon	26392180	26392401	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=CHM13_chrY_T0001985;gene_id=CHM13_chrY_G0000747;Parent=CHM13_chrY_T0001985;transcript_name=CHM13_chrY_T0001985;gene_name=USP9YP31;ID=exon:CHM13_chrY_T0001985:0;Name=USP9YP31;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26392402	26394546	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=CHM13_chrY_T0001985;gene_id=CHM13_chrY_G0000747;Parent=CHM13_chrY_T0001985;transcript_name=CHM13_chrY_T0001985;gene_name=USP9YP31;ID=intron:CHM13_chrY_T0001985:0;Name=USP9YP31;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26394547	26394766	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=CHM13_chrY_T0001985;gene_id=CHM13_chrY_G0000747;Parent=CHM13_chrY_T0001985;transcript_name=CHM13_chrY_T0001985;gene_name=USP9YP31;ID=exon:CHM13_chrY_T0001985:1;Name=USP9YP31;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26394767	26396564	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=CHM13_chrY_T0001985;gene_id=CHM13_chrY_G0000747;Parent=CHM13_chrY_T0001985;transcript_name=CHM13_chrY_T0001985;gene_name=USP9YP31;ID=intron:CHM13_chrY_T0001985:1;Name=USP9YP31;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26396565	26396754	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=CHM13_chrY_T0001985;gene_id=CHM13_chrY_G0000747;Parent=CHM13_chrY_T0001985;transcript_name=CHM13_chrY_T0001985;gene_name=USP9YP31;ID=exon:CHM13_chrY_T0001985:2;Name=USP9YP31;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26396755	26398569	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=CHM13_chrY_T0001985;gene_id=CHM13_chrY_G0000747;Parent=CHM13_chrY_T0001985;transcript_name=CHM13_chrY_T0001985;gene_name=USP9YP31;ID=intron:CHM13_chrY_T0001985:2;Name=USP9YP31;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26398570	26398698	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=CHM13_chrY_T0001985;gene_id=CHM13_chrY_G0000747;Parent=CHM13_chrY_T0001985;transcript_name=CHM13_chrY_T0001985;gene_name=USP9YP31;ID=exon:CHM13_chrY_T0001985:3;Name=USP9YP31;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26398699	26400701	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=CHM13_chrY_T0001985;gene_id=CHM13_chrY_G0000747;Parent=CHM13_chrY_T0001985;transcript_name=CHM13_chrY_T0001985;gene_name=USP9YP31;ID=intron:CHM13_chrY_T0001985:3;Name=USP9YP31;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26400702	26400821	.	+	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;transcript_id=CHM13_chrY_T0001985;gene_id=CHM13_chrY_G0000747;Parent=CHM13_chrY_T0001985;transcript_name=CHM13_chrY_T0001985;gene_name=USP9YP31;ID=exon:CHM13_chrY_T0001985:4;Name=USP9YP31;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26402713	26404726	.	-	.	source_gene_common_name=USP9YP35;source_gene=ENSG00000237467.1;gene_id=CHM13_chrY_G0000748;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP35;gene_sources=liftoff;ID=CHM13_chrY_G0000748;Name=USP9YP35
CHM13_chrY	CAT	transcript	26402713	26404726	1000	-	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;transcript_id=CHM13_chrY_T0001986;gene_id=CHM13_chrY_G0000748;Parent=CHM13_chrY_G0000748;transcript_name=CHM13_chrY_T0001986;gene_name=USP9YP35;ID=CHM13_chrY_T0001986;Name=USP9YP35
CHM13_chrY	CAT	exon	26402713	26402902	.	-	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;transcript_id=CHM13_chrY_T0001986;gene_id=CHM13_chrY_G0000748;Parent=CHM13_chrY_T0001986;transcript_name=CHM13_chrY_T0001986;gene_name=USP9YP35;ID=exon:CHM13_chrY_T0001986:0;Name=USP9YP35;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26402903	26404504	.	-	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;transcript_id=CHM13_chrY_T0001986;gene_id=CHM13_chrY_G0000748;Parent=CHM13_chrY_T0001986;transcript_name=CHM13_chrY_T0001986;gene_name=USP9YP35;ID=intron:CHM13_chrY_T0001986:0;Name=USP9YP35;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26404505	26404726	.	-	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;transcript_id=CHM13_chrY_T0001986;gene_id=CHM13_chrY_G0000748;Parent=CHM13_chrY_T0001986;transcript_name=CHM13_chrY_T0001986;gene_name=USP9YP35;ID=exon:CHM13_chrY_T0001986:1;Name=USP9YP35;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26431037	26432646	.	+	.	source_gene_common_name=CDY17P;source_gene=ENSG00000231375.1;gene_id=CHM13_chrY_G0000749;gene_biotype=unprocessed_pseudogene;gene_name=CDY17P;gene_sources=liftoff;ID=CHM13_chrY_G0000749;Name=CDY17P
CHM13_chrY	CAT	transcript	26431037	26432646	1000	+	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;transcript_id=CHM13_chrY_T0001987;gene_id=CHM13_chrY_G0000749;Parent=CHM13_chrY_G0000749;transcript_name=CHM13_chrY_T0001987;gene_name=CDY17P;ID=CHM13_chrY_T0001987;Name=CDY17P
CHM13_chrY	CAT	exon	26431037	26431102	.	+	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;transcript_id=CHM13_chrY_T0001987;gene_id=CHM13_chrY_G0000749;Parent=CHM13_chrY_T0001987;transcript_name=CHM13_chrY_T0001987;gene_name=CDY17P;ID=exon:CHM13_chrY_T0001987:0;Name=CDY17P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26431103	26431430	.	+	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;transcript_id=CHM13_chrY_T0001987;gene_id=CHM13_chrY_G0000749;Parent=CHM13_chrY_T0001987;transcript_name=CHM13_chrY_T0001987;gene_name=CDY17P;ID=intron:CHM13_chrY_T0001987:0;Name=CDY17P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26431431	26432646	.	+	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;transcript_id=CHM13_chrY_T0001987;gene_id=CHM13_chrY_G0000749;Parent=CHM13_chrY_T0001987;transcript_name=CHM13_chrY_T0001987;gene_name=CDY17P;ID=exon:CHM13_chrY_T0001987:1;Name=CDY17P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26434505	26437295	.	+	.	source_gene_common_name=CDY1B;source_gene=ENSG00000172352.5;gene_id=CHM13_chrY_G0000750;gene_biotype=protein_coding;gene_name=CDY1B;gene_sources=liftoff;ID=CHM13_chrY_G0000750;Name=CDY1B
CHM13_chrY	CAT	transcript	26434505	26436731	100	+	.	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=CHM13_chrY_T0001988;gene_id=CHM13_chrY_G0000750;Parent=CHM13_chrY_G0000750;transcript_name=CHM13_chrY_T0001988;gene_name=CDY1B;ID=CHM13_chrY_T0001988;Name=CDY1B
CHM13_chrY	CAT	exon	26434505	26436731	.	+	.	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=CHM13_chrY_T0001988;gene_id=CHM13_chrY_G0000750;Parent=CHM13_chrY_T0001988;transcript_name=CHM13_chrY_T0001988;gene_name=CDY1B;ID=exon:CHM13_chrY_T0001988:0;Name=CDY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	26434836	26436458	.	+	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=CHM13_chrY_T0001988;gene_id=CHM13_chrY_G0000750;Parent=CHM13_chrY_T0001988;transcript_name=CHM13_chrY_T0001988;gene_name=CDY1B;ID=CDS:CHM13_chrY_T0001988:0;Name=CDY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	26434836	26434838	.	+	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=CHM13_chrY_T0001988;gene_id=CHM13_chrY_G0000750;Parent=CHM13_chrY_T0001988;transcript_name=CHM13_chrY_T0001988;gene_name=CDY1B;ID=start_codon:CHM13_chrY_T0001988;Name=CDY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	26436456	26436458	.	+	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=CHM13_chrY_T0001988;gene_id=CHM13_chrY_G0000750;Parent=CHM13_chrY_T0001988;transcript_name=CHM13_chrY_T0001988;gene_name=CDY1B;ID=stop_codon:CHM13_chrY_T0001988;Name=CDY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26434555	26437295	100	+	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=CHM13_chrY_T0001989;gene_id=CHM13_chrY_G0000750;Parent=CHM13_chrY_G0000750;transcript_name=CHM13_chrY_T0001989;gene_name=CDY1B;ID=CHM13_chrY_T0001989;Name=CDY1B
CHM13_chrY	CAT	exon	26434555	26436427	.	+	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=CHM13_chrY_T0001989;gene_id=CHM13_chrY_G0000750;Parent=CHM13_chrY_T0001989;transcript_name=CHM13_chrY_T0001989;gene_name=CDY1B;ID=exon:CHM13_chrY_T0001989:0;Name=CDY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	26434836	26436427	.	+	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=CHM13_chrY_T0001989;gene_id=CHM13_chrY_G0000750;Parent=CHM13_chrY_T0001989;transcript_name=CHM13_chrY_T0001989;gene_name=CDY1B;ID=CDS:CHM13_chrY_T0001989:0;Name=CDY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	26434836	26434838	.	+	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=CHM13_chrY_T0001989;gene_id=CHM13_chrY_G0000750;Parent=CHM13_chrY_T0001989;transcript_name=CHM13_chrY_T0001989;gene_name=CDY1B;ID=start_codon:CHM13_chrY_T0001989;Name=CDY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26436428	26436847	.	+	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=CHM13_chrY_T0001989;gene_id=CHM13_chrY_G0000750;Parent=CHM13_chrY_T0001989;transcript_name=CHM13_chrY_T0001989;gene_name=CDY1B;ID=intron:CHM13_chrY_T0001989:0;Name=CDY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26436848	26437295	.	+	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=CHM13_chrY_T0001989;gene_id=CHM13_chrY_G0000750;Parent=CHM13_chrY_T0001989;transcript_name=CHM13_chrY_T0001989;gene_name=CDY1B;ID=exon:CHM13_chrY_T0001989:1;Name=CDY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	26436848	26436920	.	+	1	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=CHM13_chrY_T0001989;gene_id=CHM13_chrY_G0000750;Parent=CHM13_chrY_T0001989;transcript_name=CHM13_chrY_T0001989;gene_name=CDY1B;ID=CDS:CHM13_chrY_T0001989:1;Name=CDY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	26436918	26436920	.	+	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=CHM13_chrY_T0001989;gene_id=CHM13_chrY_G0000750;Parent=CHM13_chrY_T0001989;transcript_name=CHM13_chrY_T0001989;gene_name=CDY1B;ID=stop_codon:CHM13_chrY_T0001989;Name=CDY1B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26475298	26475624	.	+	.	source_gene_common_name=ELOCP34;source_gene=ENSG00000270535.1;alternative_source_transcripts=ENST00000604436.1;gene_id=CHM13_chrY_G0000751;gene_biotype=processed_pseudogene;gene_name=ELOCP34;gene_sources=liftoff;ID=CHM13_chrY_G0000751;Name=ELOCP34
CHM13_chrY	CAT	transcript	26475298	26475624	1000	+	.	source_transcript=ENST00000604436.1;source_transcript_name=ELOCP34-201;source_gene=ENSG00000270535.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270535.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP34;alternative_source_transcripts=ENST00000604436.1;transcript_id=CHM13_chrY_T0001990;gene_id=CHM13_chrY_G0000751;Parent=CHM13_chrY_G0000751;transcript_name=CHM13_chrY_T0001990;gene_name=ELOCP34;ID=CHM13_chrY_T0001990;Name=ELOCP34
CHM13_chrY	CAT	exon	26475298	26475624	.	+	.	source_transcript=ENST00000604436.1;source_transcript_name=ELOCP34-201;source_gene=ENSG00000270535.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270535.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP34;alternative_source_transcripts=ENST00000604436.1;transcript_id=CHM13_chrY_T0001990;gene_id=CHM13_chrY_G0000751;Parent=CHM13_chrY_T0001990;transcript_name=CHM13_chrY_T0001990;gene_name=ELOCP34;ID=exon:CHM13_chrY_T0001990:0;Name=ELOCP34;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26487442	26509743	.	-	.	source_gene_common_name=OFD1P12Y;source_gene=ENSG00000232585.1;gene_id=CHM13_chrY_G0000752;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P12Y;gene_sources=liftoff;ID=CHM13_chrY_G0000752;Name=OFD1P12Y
CHM13_chrY	CAT	transcript	26487442	26509743	1000	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_G0000752;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=CHM13_chrY_T0001991;Name=OFD1P12Y
CHM13_chrY	CAT	exon	26487442	26487590	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=exon:CHM13_chrY_T0001991:0;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26487591	26489205	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=intron:CHM13_chrY_T0001991:0;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26489206	26489297	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=exon:CHM13_chrY_T0001991:1;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26489298	26490402	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=intron:CHM13_chrY_T0001991:1;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26490403	26490476	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=exon:CHM13_chrY_T0001991:2;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26490477	26492252	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=intron:CHM13_chrY_T0001991:2;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26492253	26492365	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=exon:CHM13_chrY_T0001991:3;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26492366	26494471	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=intron:CHM13_chrY_T0001991:3;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26494472	26494580	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=exon:CHM13_chrY_T0001991:4;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26494581	26497624	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=intron:CHM13_chrY_T0001991:4;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26497625	26497760	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=exon:CHM13_chrY_T0001991:5;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26497761	26498098	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=intron:CHM13_chrY_T0001991:5;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26498099	26498232	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=exon:CHM13_chrY_T0001991:6;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26498233	26505736	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=intron:CHM13_chrY_T0001991:6;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26505737	26505769	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=exon:CHM13_chrY_T0001991:7;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26505770	26505854	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=intron:CHM13_chrY_T0001991:7;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26505855	26505922	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=exon:CHM13_chrY_T0001991:8;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26505923	26508129	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=intron:CHM13_chrY_T0001991:8;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26508130	26508329	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=exon:CHM13_chrY_T0001991:9;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26508330	26509644	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=intron:CHM13_chrY_T0001991:9;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26509645	26509743	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=CHM13_chrY_T0001991;gene_id=CHM13_chrY_G0000752;Parent=CHM13_chrY_T0001991;transcript_name=CHM13_chrY_T0001991;gene_name=OFD1P12Y;ID=exon:CHM13_chrY_T0001991:10;Name=OFD1P12Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26511829	26514959	.	+	.	source_gene_common_name=TRAPPC2P10;source_gene=ENSG00000228465.1;gene_id=CHM13_chrY_G0000753;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P10;gene_sources=liftoff;ID=CHM13_chrY_G0000753;Name=TRAPPC2P10
CHM13_chrY	CAT	transcript	26511829	26514959	1000	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;transcript_id=CHM13_chrY_T0001992;gene_id=CHM13_chrY_G0000753;Parent=CHM13_chrY_G0000753;transcript_name=CHM13_chrY_T0001992;gene_name=TRAPPC2P10;ID=CHM13_chrY_T0001992;Name=TRAPPC2P10
CHM13_chrY	CAT	exon	26511829	26511940	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;transcript_id=CHM13_chrY_T0001992;gene_id=CHM13_chrY_G0000753;Parent=CHM13_chrY_T0001992;transcript_name=CHM13_chrY_T0001992;gene_name=TRAPPC2P10;ID=exon:CHM13_chrY_T0001992:0;Name=TRAPPC2P10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26511941	26514304	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;transcript_id=CHM13_chrY_T0001992;gene_id=CHM13_chrY_G0000753;Parent=CHM13_chrY_T0001992;transcript_name=CHM13_chrY_T0001992;gene_name=TRAPPC2P10;ID=intron:CHM13_chrY_T0001992:0;Name=TRAPPC2P10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26514305	26514436	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;transcript_id=CHM13_chrY_T0001992;gene_id=CHM13_chrY_G0000753;Parent=CHM13_chrY_T0001992;transcript_name=CHM13_chrY_T0001992;gene_name=TRAPPC2P10;ID=exon:CHM13_chrY_T0001992:1;Name=TRAPPC2P10;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26514437	26514880	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;transcript_id=CHM13_chrY_T0001992;gene_id=CHM13_chrY_G0000753;Parent=CHM13_chrY_T0001992;transcript_name=CHM13_chrY_T0001992;gene_name=TRAPPC2P10;ID=intron:CHM13_chrY_T0001992:1;Name=TRAPPC2P10;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26514881	26514959	.	+	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;transcript_id=CHM13_chrY_T0001992;gene_id=CHM13_chrY_G0000753;Parent=CHM13_chrY_T0001992;transcript_name=CHM13_chrY_T0001992;gene_name=TRAPPC2P10;ID=exon:CHM13_chrY_T0001992:2;Name=TRAPPC2P10;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26522305	26525954	.	-	.	source_gene_common_name=RAB9AP5;source_gene=ENSG00000231423.1;gene_id=CHM13_chrY_G0000754;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP5;gene_sources=liftoff;ID=CHM13_chrY_G0000754;Name=RAB9AP5
CHM13_chrY	CAT	transcript	26522305	26525954	1000	-	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;transcript_id=CHM13_chrY_T0001993;gene_id=CHM13_chrY_G0000754;Parent=CHM13_chrY_G0000754;transcript_name=CHM13_chrY_T0001993;gene_name=RAB9AP5;ID=CHM13_chrY_T0001993;Name=RAB9AP5
CHM13_chrY	CAT	exon	26522305	26522673	.	-	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;transcript_id=CHM13_chrY_T0001993;gene_id=CHM13_chrY_G0000754;Parent=CHM13_chrY_T0001993;transcript_name=CHM13_chrY_T0001993;gene_name=RAB9AP5;ID=exon:CHM13_chrY_T0001993:0;Name=RAB9AP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26522674	26525726	.	-	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;transcript_id=CHM13_chrY_T0001993;gene_id=CHM13_chrY_G0000754;Parent=CHM13_chrY_T0001993;transcript_name=CHM13_chrY_T0001993;gene_name=RAB9AP5;ID=intron:CHM13_chrY_T0001993:0;Name=RAB9AP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26525727	26525954	.	-	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;transcript_id=CHM13_chrY_T0001993;gene_id=CHM13_chrY_G0000754;Parent=CHM13_chrY_T0001993;transcript_name=CHM13_chrY_T0001993;gene_name=RAB9AP5;ID=exon:CHM13_chrY_T0001993:1;Name=RAB9AP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26530227	26536593	.	+	.	source_gene_common_name=USP9YP12;source_gene=ENSG00000227871.1;gene_id=CHM13_chrY_G0000755;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP12;gene_sources=liftoff;ID=CHM13_chrY_G0000755;Name=USP9YP12
CHM13_chrY	CAT	transcript	26530227	26536593	1000	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=CHM13_chrY_T0001994;gene_id=CHM13_chrY_G0000755;Parent=CHM13_chrY_G0000755;transcript_name=CHM13_chrY_T0001994;gene_name=USP9YP12;ID=CHM13_chrY_T0001994;Name=USP9YP12
CHM13_chrY	CAT	exon	26530227	26530358	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=CHM13_chrY_T0001994;gene_id=CHM13_chrY_G0000755;Parent=CHM13_chrY_T0001994;transcript_name=CHM13_chrY_T0001994;gene_name=USP9YP12;ID=exon:CHM13_chrY_T0001994:0;Name=USP9YP12;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26530359	26535419	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=CHM13_chrY_T0001994;gene_id=CHM13_chrY_G0000755;Parent=CHM13_chrY_T0001994;transcript_name=CHM13_chrY_T0001994;gene_name=USP9YP12;ID=intron:CHM13_chrY_T0001994:0;Name=USP9YP12;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26535420	26535573	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=CHM13_chrY_T0001994;gene_id=CHM13_chrY_G0000755;Parent=CHM13_chrY_T0001994;transcript_name=CHM13_chrY_T0001994;gene_name=USP9YP12;ID=exon:CHM13_chrY_T0001994:1;Name=USP9YP12;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26535574	26535928	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=CHM13_chrY_T0001994;gene_id=CHM13_chrY_G0000755;Parent=CHM13_chrY_T0001994;transcript_name=CHM13_chrY_T0001994;gene_name=USP9YP12;ID=intron:CHM13_chrY_T0001994:1;Name=USP9YP12;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26535929	26536116	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=CHM13_chrY_T0001994;gene_id=CHM13_chrY_G0000755;Parent=CHM13_chrY_T0001994;transcript_name=CHM13_chrY_T0001994;gene_name=USP9YP12;ID=exon:CHM13_chrY_T0001994:2;Name=USP9YP12;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26536117	26536497	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=CHM13_chrY_T0001994;gene_id=CHM13_chrY_G0000755;Parent=CHM13_chrY_T0001994;transcript_name=CHM13_chrY_T0001994;gene_name=USP9YP12;ID=intron:CHM13_chrY_T0001994:2;Name=USP9YP12;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26536498	26536593	.	+	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;transcript_id=CHM13_chrY_T0001994;gene_id=CHM13_chrY_G0000755;Parent=CHM13_chrY_T0001994;transcript_name=CHM13_chrY_T0001994;gene_name=USP9YP12;ID=exon:CHM13_chrY_T0001994:3;Name=USP9YP12;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26535749	26535902	.	+	.	source_gene_common_name=RNU1-86P;source_gene=ENSG00000251917.1;alternative_source_transcripts=ENST00000516617.1;gene_id=CHM13_chrY_G0000756;gene_biotype=snRNA;gene_name=RNU1-86P;gene_sources=liftoff;ID=CHM13_chrY_G0000756;Name=RNU1-86P
CHM13_chrY	CAT	transcript	26535749	26535902	1000	+	.	source_transcript=ENST00000516108.1;source_transcript_name=RNU1-86P-201;source_gene=ENSG00000251917.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251917.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516108.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516108.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-86P;alternative_source_transcripts=ENST00000516617.1;transcript_id=CHM13_chrY_T0001995;gene_id=CHM13_chrY_G0000756;Parent=CHM13_chrY_G0000756;transcript_name=CHM13_chrY_T0001995;gene_name=RNU1-86P;ID=CHM13_chrY_T0001995;Name=RNU1-86P
CHM13_chrY	CAT	exon	26535749	26535902	.	+	.	source_transcript=ENST00000516108.1;source_transcript_name=RNU1-86P-201;source_gene=ENSG00000251917.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251917.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516108.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516108.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-86P;alternative_source_transcripts=ENST00000516617.1;transcript_id=CHM13_chrY_T0001995;gene_id=CHM13_chrY_G0000756;Parent=CHM13_chrY_T0001995;transcript_name=CHM13_chrY_T0001995;gene_name=RNU1-86P;ID=exon:CHM13_chrY_T0001995:0;Name=RNU1-86P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26540897	26545792	.	+	.	source_gene_common_name=TTTY3B;source_gene=ENSG00000280961.1;alternative_source_transcripts=ENST00000417334.1;gene_id=CHM13_chrY_G0000757;gene_biotype=lncRNA;gene_name=TTTY3B;gene_sources=liftoff;ID=CHM13_chrY_G0000757;Name=TTTY3B
CHM13_chrY	CAT	transcript	26540897	26545792	1000	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000417334.1;transcript_id=CHM13_chrY_T0001996;gene_id=CHM13_chrY_G0000757;Parent=CHM13_chrY_G0000757;transcript_name=CHM13_chrY_T0001996;gene_name=TTTY3B;ID=CHM13_chrY_T0001996;Name=TTTY3B
CHM13_chrY	CAT	exon	26540897	26541000	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000417334.1;transcript_id=CHM13_chrY_T0001996;gene_id=CHM13_chrY_G0000757;Parent=CHM13_chrY_T0001996;transcript_name=CHM13_chrY_T0001996;gene_name=TTTY3B;ID=exon:CHM13_chrY_T0001996:0;Name=TTTY3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26541001	26543198	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000417334.1;transcript_id=CHM13_chrY_T0001996;gene_id=CHM13_chrY_G0000757;Parent=CHM13_chrY_T0001996;transcript_name=CHM13_chrY_T0001996;gene_name=TTTY3B;ID=intron:CHM13_chrY_T0001996:0;Name=TTTY3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26543199	26543333	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000417334.1;transcript_id=CHM13_chrY_T0001996;gene_id=CHM13_chrY_G0000757;Parent=CHM13_chrY_T0001996;transcript_name=CHM13_chrY_T0001996;gene_name=TTTY3B;ID=exon:CHM13_chrY_T0001996:1;Name=TTTY3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26543334	26545687	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000417334.1;transcript_id=CHM13_chrY_T0001996;gene_id=CHM13_chrY_G0000757;Parent=CHM13_chrY_T0001996;transcript_name=CHM13_chrY_T0001996;gene_name=TTTY3B;ID=intron:CHM13_chrY_T0001996:1;Name=TTTY3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26545688	26545792	.	+	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000417334.1;transcript_id=CHM13_chrY_T0001996;gene_id=CHM13_chrY_G0000757;Parent=CHM13_chrY_T0001996;transcript_name=CHM13_chrY_T0001996;gene_name=TTTY3B;ID=exon:CHM13_chrY_T0001996:2;Name=TTTY3B;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26542418	26547566	.	-	.	source_gene_common_name=USP9YP11;source_gene=ENSG00000226369.1;gene_id=CHM13_chrY_G0000758;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP11;gene_sources=liftoff;ID=CHM13_chrY_G0000758;Name=USP9YP11
CHM13_chrY	CAT	transcript	26542418	26547566	1000	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=CHM13_chrY_T0001997;gene_id=CHM13_chrY_G0000758;Parent=CHM13_chrY_G0000758;transcript_name=CHM13_chrY_T0001997;gene_name=USP9YP11;ID=CHM13_chrY_T0001997;Name=USP9YP11
CHM13_chrY	CAT	exon	26542418	26542608	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=CHM13_chrY_T0001997;gene_id=CHM13_chrY_G0000758;Parent=CHM13_chrY_T0001997;transcript_name=CHM13_chrY_T0001997;gene_name=USP9YP11;ID=exon:CHM13_chrY_T0001997:0;Name=USP9YP11;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26542609	26544243	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=CHM13_chrY_T0001997;gene_id=CHM13_chrY_G0000758;Parent=CHM13_chrY_T0001997;transcript_name=CHM13_chrY_T0001997;gene_name=USP9YP11;ID=intron:CHM13_chrY_T0001997:0;Name=USP9YP11;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26544244	26544506	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=CHM13_chrY_T0001997;gene_id=CHM13_chrY_G0000758;Parent=CHM13_chrY_T0001997;transcript_name=CHM13_chrY_T0001997;gene_name=USP9YP11;ID=exon:CHM13_chrY_T0001997:1;Name=USP9YP11;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26544507	26545629	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=CHM13_chrY_T0001997;gene_id=CHM13_chrY_G0000758;Parent=CHM13_chrY_T0001997;transcript_name=CHM13_chrY_T0001997;gene_name=USP9YP11;ID=intron:CHM13_chrY_T0001997:1;Name=USP9YP11;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26545630	26545853	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=CHM13_chrY_T0001997;gene_id=CHM13_chrY_G0000758;Parent=CHM13_chrY_T0001997;transcript_name=CHM13_chrY_T0001997;gene_name=USP9YP11;ID=exon:CHM13_chrY_T0001997:2;Name=USP9YP11;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26545854	26547527	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=CHM13_chrY_T0001997;gene_id=CHM13_chrY_G0000758;Parent=CHM13_chrY_T0001997;transcript_name=CHM13_chrY_T0001997;gene_name=USP9YP11;ID=intron:CHM13_chrY_T0001997:2;Name=USP9YP11;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26547528	26547566	.	-	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;transcript_id=CHM13_chrY_T0001997;gene_id=CHM13_chrY_G0000758;Parent=CHM13_chrY_T0001997;transcript_name=CHM13_chrY_T0001997;gene_name=USP9YP11;ID=exon:CHM13_chrY_T0001997:3;Name=USP9YP11;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26561001	26562606	.	-	.	source_gene_common_name=USP9YP13;source_gene=ENSG00000224571.1;gene_id=CHM13_chrY_G0000759;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP13;gene_sources=liftoff;ID=CHM13_chrY_G0000759;Name=USP9YP13
CHM13_chrY	CAT	transcript	26561001	26562606	1000	-	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;transcript_id=CHM13_chrY_T0001998;gene_id=CHM13_chrY_G0000759;Parent=CHM13_chrY_G0000759;transcript_name=CHM13_chrY_T0001998;gene_name=USP9YP13;ID=CHM13_chrY_T0001998;Name=USP9YP13
CHM13_chrY	CAT	exon	26561001	26561260	.	-	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;transcript_id=CHM13_chrY_T0001998;gene_id=CHM13_chrY_G0000759;Parent=CHM13_chrY_T0001998;transcript_name=CHM13_chrY_T0001998;gene_name=USP9YP13;ID=exon:CHM13_chrY_T0001998:0;Name=USP9YP13;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26561261	26562386	.	-	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;transcript_id=CHM13_chrY_T0001998;gene_id=CHM13_chrY_G0000759;Parent=CHM13_chrY_T0001998;transcript_name=CHM13_chrY_T0001998;gene_name=USP9YP13;ID=intron:CHM13_chrY_T0001998:0;Name=USP9YP13;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26562387	26562606	.	-	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;transcript_id=CHM13_chrY_T0001998;gene_id=CHM13_chrY_G0000759;Parent=CHM13_chrY_T0001998;transcript_name=CHM13_chrY_T0001998;gene_name=USP9YP13;ID=exon:CHM13_chrY_T0001998:1;Name=USP9YP13;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26564788	26565270	.	+	.	source_gene_common_name=XKRYP5;source_gene=ENSG00000223406.1;alternative_source_transcripts=ENST00000449659.1;gene_id=CHM13_chrY_G0000760;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP5;gene_sources=liftoff;ID=CHM13_chrY_G0000760;Name=XKRYP5
CHM13_chrY	CAT	transcript	26564788	26565270	1000	+	.	source_transcript=ENST00000449659.1;source_transcript_name=XKRYP5-201;source_gene=ENSG00000223406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449659.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP5;alternative_source_transcripts=ENST00000449659.1;transcript_id=CHM13_chrY_T0001999;gene_id=CHM13_chrY_G0000760;Parent=CHM13_chrY_G0000760;transcript_name=CHM13_chrY_T0001999;gene_name=XKRYP5;ID=CHM13_chrY_T0001999;Name=XKRYP5
CHM13_chrY	CAT	exon	26564788	26565270	.	+	.	source_transcript=ENST00000449659.1;source_transcript_name=XKRYP5-201;source_gene=ENSG00000223406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP5;alternative_source_transcripts=ENST00000449659.1;transcript_id=CHM13_chrY_T0001999;gene_id=CHM13_chrY_G0000760;Parent=CHM13_chrY_T0001999;transcript_name=CHM13_chrY_T0001999;gene_name=XKRYP5;ID=exon:CHM13_chrY_T0001999:0;Name=XKRYP5;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26625419	26626988	.	+	.	source_gene_common_name=CDY15P;source_gene=ENSG00000223362.1;gene_id=CHM13_chrY_G0000761;gene_biotype=unprocessed_pseudogene;gene_name=CDY15P;gene_sources=liftoff;ID=CHM13_chrY_G0000761;Name=CDY15P
CHM13_chrY	CAT	transcript	26625419	26626988	1000	+	.	source_transcript=ENST00000421995.1;source_transcript_name=CDY15P-201;source_gene=ENSG00000223362.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223362.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY15P;transcript_id=CHM13_chrY_T0002000;gene_id=CHM13_chrY_G0000761;Parent=CHM13_chrY_G0000761;transcript_name=CHM13_chrY_T0002000;gene_name=CDY15P;ID=CHM13_chrY_T0002000;Name=CDY15P
CHM13_chrY	CAT	exon	26625419	26626988	.	+	.	source_transcript=ENST00000421995.1;source_transcript_name=CDY15P-201;source_gene=ENSG00000223362.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223362.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY15P;transcript_id=CHM13_chrY_T0002000;gene_id=CHM13_chrY_G0000761;Parent=CHM13_chrY_T0002000;transcript_name=CHM13_chrY_T0002000;gene_name=CDY15P;ID=exon:CHM13_chrY_T0002000:0;Name=CDY15P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26673446	26673684	.	+	.	source_gene_common_name=ELOCP9;source_gene=ENSG00000231540.1;gene_id=CHM13_chrY_G0000762;gene_biotype=processed_pseudogene;gene_name=ELOCP9;gene_sources=liftoff;ID=CHM13_chrY_G0000762;Name=ELOCP9
CHM13_chrY	CAT	transcript	26673446	26673684	1000	+	.	source_transcript=ENST00000418624.1;source_transcript_name=ELOCP9-201;source_gene=ENSG00000231540.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231540.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP9;transcript_id=CHM13_chrY_T0002001;gene_id=CHM13_chrY_G0000762;Parent=CHM13_chrY_G0000762;transcript_name=CHM13_chrY_T0002001;gene_name=ELOCP9;ID=CHM13_chrY_T0002001;Name=ELOCP9
CHM13_chrY	CAT	exon	26673446	26673684	.	+	.	source_transcript=ENST00000418624.1;source_transcript_name=ELOCP9-201;source_gene=ENSG00000231540.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231540.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP9;transcript_id=CHM13_chrY_T0002001;gene_id=CHM13_chrY_G0000762;Parent=CHM13_chrY_T0002001;transcript_name=CHM13_chrY_T0002001;gene_name=ELOCP9;ID=exon:CHM13_chrY_T0002001:0;Name=ELOCP9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26684355	26711285	.	-	.	source_gene_common_name=OFD1P11Y;source_gene=ENSG00000237302.1;gene_id=CHM13_chrY_G0000763;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P11Y;gene_sources=liftoff;ID=CHM13_chrY_G0000763;Name=OFD1P11Y
CHM13_chrY	CAT	transcript	26684355	26711285	1000	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_G0000763;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=CHM13_chrY_T0002002;Name=OFD1P11Y
CHM13_chrY	CAT	exon	26684355	26684426	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=exon:CHM13_chrY_T0002002:0;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26684427	26685528	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=intron:CHM13_chrY_T0002002:0;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26685529	26685602	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=exon:CHM13_chrY_T0002002:1;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26685603	26687388	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=intron:CHM13_chrY_T0002002:1;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26687389	26687507	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=exon:CHM13_chrY_T0002002:2;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26687508	26690155	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=intron:CHM13_chrY_T0002002:2;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26690156	26690262	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=exon:CHM13_chrY_T0002002:3;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26690263	26693308	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=intron:CHM13_chrY_T0002002:3;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26693309	26693454	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=exon:CHM13_chrY_T0002002:4;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26693455	26693798	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=intron:CHM13_chrY_T0002002:4;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26693799	26693933	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=exon:CHM13_chrY_T0002002:5;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26693934	26697779	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=intron:CHM13_chrY_T0002002:5;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26697780	26697903	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=exon:CHM13_chrY_T0002002:6;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26697904	26698693	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=intron:CHM13_chrY_T0002002:6;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26698694	26698724	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=exon:CHM13_chrY_T0002002:7;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26698725	26698808	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=intron:CHM13_chrY_T0002002:7;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26698809	26698877	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=exon:CHM13_chrY_T0002002:8;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26698878	26709567	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=intron:CHM13_chrY_T0002002:8;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26709568	26709769	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=exon:CHM13_chrY_T0002002:9;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26709770	26711187	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=intron:CHM13_chrY_T0002002:9;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26711188	26711285	.	-	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=CHM13_chrY_T0002002;gene_id=CHM13_chrY_G0000763;Parent=CHM13_chrY_T0002002;transcript_name=CHM13_chrY_T0002002;gene_name=OFD1P11Y;ID=exon:CHM13_chrY_T0002002:10;Name=OFD1P11Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26716934	26719679	.	+	.	source_gene_common_name=TRAPPC2P9;source_gene=ENSG00000232845.1;gene_id=CHM13_chrY_G0000764;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P9;gene_sources=liftoff;ID=CHM13_chrY_G0000764;Name=TRAPPC2P9
CHM13_chrY	CAT	transcript	26716934	26719679	1000	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;transcript_id=CHM13_chrY_T0002003;gene_id=CHM13_chrY_G0000764;Parent=CHM13_chrY_G0000764;transcript_name=CHM13_chrY_T0002003;gene_name=TRAPPC2P9;ID=CHM13_chrY_T0002003;Name=TRAPPC2P9
CHM13_chrY	CAT	exon	26716934	26717045	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;transcript_id=CHM13_chrY_T0002003;gene_id=CHM13_chrY_G0000764;Parent=CHM13_chrY_T0002003;transcript_name=CHM13_chrY_T0002003;gene_name=TRAPPC2P9;ID=exon:CHM13_chrY_T0002003:0;Name=TRAPPC2P9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26717046	26718999	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;transcript_id=CHM13_chrY_T0002003;gene_id=CHM13_chrY_G0000764;Parent=CHM13_chrY_T0002003;transcript_name=CHM13_chrY_T0002003;gene_name=TRAPPC2P9;ID=intron:CHM13_chrY_T0002003:0;Name=TRAPPC2P9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26719000	26719144	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;transcript_id=CHM13_chrY_T0002003;gene_id=CHM13_chrY_G0000764;Parent=CHM13_chrY_T0002003;transcript_name=CHM13_chrY_T0002003;gene_name=TRAPPC2P9;ID=exon:CHM13_chrY_T0002003:1;Name=TRAPPC2P9;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26719145	26719593	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;transcript_id=CHM13_chrY_T0002003;gene_id=CHM13_chrY_G0000764;Parent=CHM13_chrY_T0002003;transcript_name=CHM13_chrY_T0002003;gene_name=TRAPPC2P9;ID=intron:CHM13_chrY_T0002003:1;Name=TRAPPC2P9;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26719594	26719679	.	+	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;transcript_id=CHM13_chrY_T0002003;gene_id=CHM13_chrY_G0000764;Parent=CHM13_chrY_T0002003;transcript_name=CHM13_chrY_T0002003;gene_name=TRAPPC2P9;ID=exon:CHM13_chrY_T0002003:2;Name=TRAPPC2P9;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26730757	26731329	.	-	.	source_gene_common_name=RAB9AP1;source_gene=ENSG00000232910.1;alternative_source_transcripts=ENST00000412737.1;gene_id=CHM13_chrY_G0000765;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP1;gene_sources=liftoff;ID=CHM13_chrY_G0000765;Name=RAB9AP1
CHM13_chrY	CAT	transcript	26730757	26731329	1000	-	.	source_transcript=ENST00000449393.1;source_transcript_name=RAB9AP1-201;source_gene=ENSG00000232910.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232910.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449393.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP1;alternative_source_transcripts=ENST00000412737.1;transcript_id=CHM13_chrY_T0002004;gene_id=CHM13_chrY_G0000765;Parent=CHM13_chrY_G0000765;transcript_name=CHM13_chrY_T0002004;gene_name=RAB9AP1;ID=CHM13_chrY_T0002004;Name=RAB9AP1
CHM13_chrY	CAT	exon	26730757	26731329	.	-	.	source_transcript=ENST00000449393.1;source_transcript_name=RAB9AP1-201;source_gene=ENSG00000232910.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232910.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449393.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP1;alternative_source_transcripts=ENST00000412737.1;transcript_id=CHM13_chrY_T0002004;gene_id=CHM13_chrY_G0000765;Parent=CHM13_chrY_T0002004;transcript_name=CHM13_chrY_T0002004;gene_name=RAB9AP1;ID=exon:CHM13_chrY_T0002004:0;Name=RAB9AP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26735824	26742263	.	+	.	source_gene_common_name=USP9YP29;source_gene=ENSG00000232424.1;gene_id=CHM13_chrY_G0000766;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP29;gene_sources=liftoff;ID=CHM13_chrY_G0000766;Name=USP9YP29
CHM13_chrY	CAT	transcript	26735824	26742263	1000	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=CHM13_chrY_T0002005;gene_id=CHM13_chrY_G0000766;Parent=CHM13_chrY_G0000766;transcript_name=CHM13_chrY_T0002005;gene_name=USP9YP29;ID=CHM13_chrY_T0002005;Name=USP9YP29
CHM13_chrY	CAT	exon	26735824	26735951	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=CHM13_chrY_T0002005;gene_id=CHM13_chrY_G0000766;Parent=CHM13_chrY_T0002005;transcript_name=CHM13_chrY_T0002005;gene_name=USP9YP29;ID=exon:CHM13_chrY_T0002005:0;Name=USP9YP29;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26735952	26741087	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=CHM13_chrY_T0002005;gene_id=CHM13_chrY_G0000766;Parent=CHM13_chrY_T0002005;transcript_name=CHM13_chrY_T0002005;gene_name=USP9YP29;ID=intron:CHM13_chrY_T0002005:0;Name=USP9YP29;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26741088	26741237	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=CHM13_chrY_T0002005;gene_id=CHM13_chrY_G0000766;Parent=CHM13_chrY_T0002005;transcript_name=CHM13_chrY_T0002005;gene_name=USP9YP29;ID=exon:CHM13_chrY_T0002005:1;Name=USP9YP29;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26741238	26741386	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=CHM13_chrY_T0002005;gene_id=CHM13_chrY_G0000766;Parent=CHM13_chrY_T0002005;transcript_name=CHM13_chrY_T0002005;gene_name=USP9YP29;ID=intron:CHM13_chrY_T0002005:1;Name=USP9YP29;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26741387	26741416	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=CHM13_chrY_T0002005;gene_id=CHM13_chrY_G0000766;Parent=CHM13_chrY_T0002005;transcript_name=CHM13_chrY_T0002005;gene_name=USP9YP29;ID=exon:CHM13_chrY_T0002005:2;Name=USP9YP29;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26741417	26741626	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=CHM13_chrY_T0002005;gene_id=CHM13_chrY_G0000766;Parent=CHM13_chrY_T0002005;transcript_name=CHM13_chrY_T0002005;gene_name=USP9YP29;ID=intron:CHM13_chrY_T0002005:2;Name=USP9YP29;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26741627	26741785	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=CHM13_chrY_T0002005;gene_id=CHM13_chrY_G0000766;Parent=CHM13_chrY_T0002005;transcript_name=CHM13_chrY_T0002005;gene_name=USP9YP29;ID=exon:CHM13_chrY_T0002005:3;Name=USP9YP29;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26741786	26742167	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=CHM13_chrY_T0002005;gene_id=CHM13_chrY_G0000766;Parent=CHM13_chrY_T0002005;transcript_name=CHM13_chrY_T0002005;gene_name=USP9YP29;ID=intron:CHM13_chrY_T0002005:3;Name=USP9YP29;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26742168	26742263	.	+	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=CHM13_chrY_T0002005;gene_id=CHM13_chrY_G0000766;Parent=CHM13_chrY_T0002005;transcript_name=CHM13_chrY_T0002005;gene_name=USP9YP29;ID=exon:CHM13_chrY_T0002005:4;Name=USP9YP29;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26741416	26741579	.	+	.	source_gene_common_name=RNU1-97P;source_gene=ENSG00000252681.1;gene_id=CHM13_chrY_G0000767;gene_biotype=snRNA;gene_name=RNU1-97P;gene_sources=liftoff;ID=CHM13_chrY_G0000767;Name=RNU1-97P
CHM13_chrY	CAT	transcript	26741416	26741579	1000	+	.	source_transcript=ENST00000516872.1;source_transcript_name=RNU1-97P-201;source_gene=ENSG00000252681.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252681.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516872.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516872.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-97P;transcript_id=CHM13_chrY_T0002006;gene_id=CHM13_chrY_G0000767;Parent=CHM13_chrY_G0000767;transcript_name=CHM13_chrY_T0002006;gene_name=RNU1-97P;ID=CHM13_chrY_T0002006;Name=RNU1-97P
CHM13_chrY	CAT	exon	26741416	26741579	.	+	.	source_transcript=ENST00000516872.1;source_transcript_name=RNU1-97P-201;source_gene=ENSG00000252681.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252681.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516872.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516872.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-97P;transcript_id=CHM13_chrY_T0002006;gene_id=CHM13_chrY_G0000767;Parent=CHM13_chrY_T0002006;transcript_name=CHM13_chrY_T0002006;gene_name=RNU1-97P;ID=exon:CHM13_chrY_T0002006:0;Name=RNU1-97P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26746272	26748328	.	-	.	source_gene_common_name=USP9YP25;source_gene=ENSG00000224866.1;gene_id=CHM13_chrY_G0000768;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP25;gene_sources=liftoff;ID=CHM13_chrY_G0000768;Name=USP9YP25
CHM13_chrY	CAT	transcript	26746272	26748328	1000	-	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=CHM13_chrY_T0002007;gene_id=CHM13_chrY_G0000768;Parent=CHM13_chrY_G0000768;transcript_name=CHM13_chrY_T0002007;gene_name=USP9YP25;ID=CHM13_chrY_T0002007;Name=USP9YP25
CHM13_chrY	CAT	exon	26746272	26746463	.	-	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=CHM13_chrY_T0002007;gene_id=CHM13_chrY_G0000768;Parent=CHM13_chrY_T0002007;transcript_name=CHM13_chrY_T0002007;gene_name=USP9YP25;ID=exon:CHM13_chrY_T0002007:0;Name=USP9YP25;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26746464	26748077	.	-	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=CHM13_chrY_T0002007;gene_id=CHM13_chrY_G0000768;Parent=CHM13_chrY_T0002007;transcript_name=CHM13_chrY_T0002007;gene_name=USP9YP25;ID=intron:CHM13_chrY_T0002007:0;Name=USP9YP25;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26748078	26748328	.	-	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=CHM13_chrY_T0002007;gene_id=CHM13_chrY_G0000768;Parent=CHM13_chrY_T0002007;transcript_name=CHM13_chrY_T0002007;gene_name=USP9YP25;ID=exon:CHM13_chrY_T0002007:1;Name=USP9YP25;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26755713	26766599	.	+	.	source_gene_common_name=XKRYP3;source_gene=ENSG00000236620.1;alternative_source_transcripts=ENST00000440468.1;gene_id=CHM13_chrY_G0000769;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP3;gene_sources=liftoff;ID=CHM13_chrY_G0000769;Name=XKRYP3
CHM13_chrY	CAT	transcript	26755713	26766599	1000	+	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000440468.1;transcript_id=CHM13_chrY_T0002008;gene_id=CHM13_chrY_G0000769;Parent=CHM13_chrY_G0000769;transcript_name=CHM13_chrY_T0002008;gene_name=XKRYP3;ID=CHM13_chrY_T0002008;Name=XKRYP3
CHM13_chrY	CAT	exon	26755713	26756048	.	+	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000440468.1;transcript_id=CHM13_chrY_T0002008;gene_id=CHM13_chrY_G0000769;Parent=CHM13_chrY_T0002008;transcript_name=CHM13_chrY_T0002008;gene_name=XKRYP3;ID=exon:CHM13_chrY_T0002008:0;Name=XKRYP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26756049	26765819	.	+	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000440468.1;transcript_id=CHM13_chrY_T0002008;gene_id=CHM13_chrY_G0000769;Parent=CHM13_chrY_T0002008;transcript_name=CHM13_chrY_T0002008;gene_name=XKRYP3;ID=intron:CHM13_chrY_T0002008:0;Name=XKRYP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26765820	26766599	.	+	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000440468.1;transcript_id=CHM13_chrY_T0002008;gene_id=CHM13_chrY_G0000769;Parent=CHM13_chrY_T0002008;transcript_name=CHM13_chrY_T0002008;gene_name=XKRYP3;ID=exon:CHM13_chrY_T0002008:1;Name=XKRYP3;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26803687	26804018	.	-	.	source_gene_common_name=ELOCP16;source_gene=ENSG00000227915.1;alternative_source_transcripts=ENST00000436690.1;gene_id=CHM13_chrY_G0000770;gene_biotype=unprocessed_pseudogene;gene_name=ELOCP16;gene_sources=liftoff;ID=CHM13_chrY_G0000770;Name=ELOCP16
CHM13_chrY	CAT	transcript	26803687	26804018	1000	-	.	source_transcript=ENST00000444494.1;source_transcript_name=ELOCP16-201;source_gene=ENSG00000227915.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227915.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444494.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444494.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP16;alternative_source_transcripts=ENST00000436690.1;transcript_id=CHM13_chrY_T0002009;gene_id=CHM13_chrY_G0000770;Parent=CHM13_chrY_G0000770;transcript_name=CHM13_chrY_T0002009;gene_name=ELOCP16;ID=CHM13_chrY_T0002009;Name=ELOCP16
CHM13_chrY	CAT	exon	26803687	26804018	.	-	.	source_transcript=ENST00000444494.1;source_transcript_name=ELOCP16-201;source_gene=ENSG00000227915.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227915.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444494.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP16;alternative_source_transcripts=ENST00000436690.1;transcript_id=CHM13_chrY_T0002009;gene_id=CHM13_chrY_G0000770;Parent=CHM13_chrY_T0002009;transcript_name=CHM13_chrY_T0002009;gene_name=ELOCP16;ID=exon:CHM13_chrY_T0002009:0;Name=ELOCP16;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26807130	26808143	.	-	.	source_gene_common_name=CDY14P;source_gene=ENSG00000226873.1;alternative_source_transcripts=ENST00000451661.1;gene_id=CHM13_chrY_G0000771;gene_biotype=unprocessed_pseudogene;gene_name=CDY14P;gene_sources=liftoff;ID=CHM13_chrY_G0000771;Name=CDY14P
CHM13_chrY	CAT	transcript	26807130	26808143	1000	-	.	source_transcript=ENST00000431260.1;source_transcript_name=CDY14P-201;source_gene=ENSG00000226873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431260.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY14P;alternative_source_transcripts=ENST00000451661.1;transcript_id=CHM13_chrY_T0002010;gene_id=CHM13_chrY_G0000771;Parent=CHM13_chrY_G0000771;transcript_name=CHM13_chrY_T0002010;gene_name=CDY14P;ID=CHM13_chrY_T0002010;Name=CDY14P
CHM13_chrY	CAT	exon	26807130	26808143	.	-	.	source_transcript=ENST00000431260.1;source_transcript_name=CDY14P-201;source_gene=ENSG00000226873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431260.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY14P;alternative_source_transcripts=ENST00000451661.1;transcript_id=CHM13_chrY_T0002010;gene_id=CHM13_chrY_G0000771;Parent=CHM13_chrY_T0002010;transcript_name=CHM13_chrY_T0002010;gene_name=CDY14P;ID=exon:CHM13_chrY_T0002010:0;Name=CDY14P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26814700	26823056	.	+	.	source_gene_common_name=USP9YP18;source_gene=ENSG00000223407.1;gene_id=CHM13_chrY_G0000772;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP18;gene_sources=liftoff;ID=CHM13_chrY_G0000772;Name=USP9YP18
CHM13_chrY	CAT	transcript	26814700	26823056	1000	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=CHM13_chrY_T0002011;gene_id=CHM13_chrY_G0000772;Parent=CHM13_chrY_G0000772;transcript_name=CHM13_chrY_T0002011;gene_name=USP9YP18;ID=CHM13_chrY_T0002011;Name=USP9YP18
CHM13_chrY	CAT	exon	26814700	26814920	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=CHM13_chrY_T0002011;gene_id=CHM13_chrY_G0000772;Parent=CHM13_chrY_T0002011;transcript_name=CHM13_chrY_T0002011;gene_name=USP9YP18;ID=exon:CHM13_chrY_T0002011:0;Name=USP9YP18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26814921	26816723	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=CHM13_chrY_T0002011;gene_id=CHM13_chrY_G0000772;Parent=CHM13_chrY_T0002011;transcript_name=CHM13_chrY_T0002011;gene_name=USP9YP18;ID=intron:CHM13_chrY_T0002011:0;Name=USP9YP18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26816724	26816839	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=CHM13_chrY_T0002011;gene_id=CHM13_chrY_G0000772;Parent=CHM13_chrY_T0002011;transcript_name=CHM13_chrY_T0002011;gene_name=USP9YP18;ID=exon:CHM13_chrY_T0002011:1;Name=USP9YP18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26816840	26818625	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=CHM13_chrY_T0002011;gene_id=CHM13_chrY_G0000772;Parent=CHM13_chrY_T0002011;transcript_name=CHM13_chrY_T0002011;gene_name=USP9YP18;ID=intron:CHM13_chrY_T0002011:1;Name=USP9YP18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26818626	26818814	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=CHM13_chrY_T0002011;gene_id=CHM13_chrY_G0000772;Parent=CHM13_chrY_T0002011;transcript_name=CHM13_chrY_T0002011;gene_name=USP9YP18;ID=exon:CHM13_chrY_T0002011:2;Name=USP9YP18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26818815	26821172	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=CHM13_chrY_T0002011;gene_id=CHM13_chrY_G0000772;Parent=CHM13_chrY_T0002011;transcript_name=CHM13_chrY_T0002011;gene_name=USP9YP18;ID=intron:CHM13_chrY_T0002011:2;Name=USP9YP18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26821173	26821302	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=CHM13_chrY_T0002011;gene_id=CHM13_chrY_G0000772;Parent=CHM13_chrY_T0002011;transcript_name=CHM13_chrY_T0002011;gene_name=USP9YP18;ID=exon:CHM13_chrY_T0002011:3;Name=USP9YP18;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26821303	26823017	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=CHM13_chrY_T0002011;gene_id=CHM13_chrY_G0000772;Parent=CHM13_chrY_T0002011;transcript_name=CHM13_chrY_T0002011;gene_name=USP9YP18;ID=intron:CHM13_chrY_T0002011:3;Name=USP9YP18;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26823018	26823056	.	+	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=CHM13_chrY_T0002011;gene_id=CHM13_chrY_G0000772;Parent=CHM13_chrY_T0002011;transcript_name=CHM13_chrY_T0002011;gene_name=USP9YP18;ID=exon:CHM13_chrY_T0002011:4;Name=USP9YP18;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26823464	26824683	.	+	.	source_gene_common_name=HSFY6P;source_gene=ENSG00000224169.1;gene_id=CHM13_chrY_G0000773;gene_biotype=unprocessed_pseudogene;gene_name=HSFY6P;gene_sources=liftoff;ID=CHM13_chrY_G0000773;Name=HSFY6P
CHM13_chrY	CAT	transcript	26823464	26824683	1000	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=CHM13_chrY_T0002012;gene_id=CHM13_chrY_G0000773;Parent=CHM13_chrY_G0000773;transcript_name=CHM13_chrY_T0002012;gene_name=HSFY6P;ID=CHM13_chrY_T0002012;Name=HSFY6P
CHM13_chrY	CAT	exon	26823464	26823547	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=CHM13_chrY_T0002012;gene_id=CHM13_chrY_G0000773;Parent=CHM13_chrY_T0002012;transcript_name=CHM13_chrY_T0002012;gene_name=HSFY6P;ID=exon:CHM13_chrY_T0002012:0;Name=HSFY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26823548	26823879	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=CHM13_chrY_T0002012;gene_id=CHM13_chrY_G0000773;Parent=CHM13_chrY_T0002012;transcript_name=CHM13_chrY_T0002012;gene_name=HSFY6P;ID=intron:CHM13_chrY_T0002012:0;Name=HSFY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26823880	26824039	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=CHM13_chrY_T0002012;gene_id=CHM13_chrY_G0000773;Parent=CHM13_chrY_T0002012;transcript_name=CHM13_chrY_T0002012;gene_name=HSFY6P;ID=exon:CHM13_chrY_T0002012:1;Name=HSFY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26824040	26824524	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=CHM13_chrY_T0002012;gene_id=CHM13_chrY_G0000773;Parent=CHM13_chrY_T0002012;transcript_name=CHM13_chrY_T0002012;gene_name=HSFY6P;ID=intron:CHM13_chrY_T0002012:1;Name=HSFY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26824525	26824683	.	+	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=CHM13_chrY_T0002012;gene_id=CHM13_chrY_G0000773;Parent=CHM13_chrY_T0002012;transcript_name=CHM13_chrY_T0002012;gene_name=HSFY6P;ID=exon:CHM13_chrY_T0002012:2;Name=HSFY6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26841733	26844899	.	-	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=CHM13_chrY_G0000774;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=CHM13_chrY_G0000774;Name=ENSG00000295422
CHM13_chrY	CAT	transcript	26841733	26844899	1000	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0002013;gene_id=CHM13_chrY_G0000774;Parent=CHM13_chrY_G0000774;transcript_name=CHM13_chrY_T0002013;gene_name=ENSG00000295422;ID=CHM13_chrY_T0002013;Name=ENSG00000295422
CHM13_chrY	CAT	exon	26841733	26843075	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0002013;gene_id=CHM13_chrY_G0000774;Parent=CHM13_chrY_T0002013;transcript_name=CHM13_chrY_T0002013;gene_name=ENSG00000295422;ID=exon:CHM13_chrY_T0002013:0;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26843076	26844610	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0002013;gene_id=CHM13_chrY_G0000774;Parent=CHM13_chrY_T0002013;transcript_name=CHM13_chrY_T0002013;gene_name=ENSG00000295422;ID=intron:CHM13_chrY_T0002013:0;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26844611	26844671	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0002013;gene_id=CHM13_chrY_G0000774;Parent=CHM13_chrY_T0002013;transcript_name=CHM13_chrY_T0002013;gene_name=ENSG00000295422;ID=exon:CHM13_chrY_T0002013:1;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26844672	26844788	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0002013;gene_id=CHM13_chrY_G0000774;Parent=CHM13_chrY_T0002013;transcript_name=CHM13_chrY_T0002013;gene_name=ENSG00000295422;ID=intron:CHM13_chrY_T0002013:1;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26844789	26844899	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=CHM13_chrY_T0002013;gene_id=CHM13_chrY_G0000774;Parent=CHM13_chrY_T0002013;transcript_name=CHM13_chrY_T0002013;gene_name=ENSG00000295422;ID=exon:CHM13_chrY_T0002013:2;Name=ENSG00000295422;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26867886	26900931	.	-	.	source_gene_common_name=OFD1P10Y;source_gene=ENSG00000225466.1;gene_id=CHM13_chrY_G0000775;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P10Y;gene_sources=liftoff;ID=CHM13_chrY_G0000775;Name=OFD1P10Y
CHM13_chrY	CAT	transcript	26867886	26900931	1000	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_G0000775;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=CHM13_chrY_T0002014;Name=OFD1P10Y
CHM13_chrY	CAT	exon	26867886	26867917	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=exon:CHM13_chrY_T0002014:0;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26867918	26868216	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=intron:CHM13_chrY_T0002014:0;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26868217	26868298	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=exon:CHM13_chrY_T0002014:1;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26868299	26869486	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=intron:CHM13_chrY_T0002014:1;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26869487	26869641	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=exon:CHM13_chrY_T0002014:2;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26869642	26876275	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=intron:CHM13_chrY_T0002014:2;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26876276	26876376	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=exon:CHM13_chrY_T0002014:3;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26876377	26895721	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=intron:CHM13_chrY_T0002014:3;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26895722	26895826	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=exon:CHM13_chrY_T0002014:4;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26895827	26896199	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=intron:CHM13_chrY_T0002014:4;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26896200	26896815	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=exon:CHM13_chrY_T0002014:5;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26896816	26898532	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=intron:CHM13_chrY_T0002014:5;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26898533	26898642	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=exon:CHM13_chrY_T0002014:6;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26898643	26899178	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=intron:CHM13_chrY_T0002014:6;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26899179	26899303	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=exon:CHM13_chrY_T0002014:7;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26899304	26900824	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=intron:CHM13_chrY_T0002014:7;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26900825	26900931	.	-	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;transcript_id=CHM13_chrY_T0002014;gene_id=CHM13_chrY_G0000775;Parent=CHM13_chrY_T0002014;transcript_name=CHM13_chrY_T0002014;gene_name=OFD1P10Y;ID=exon:CHM13_chrY_T0002014:8;Name=OFD1P10Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26921916	26927371	.	+	.	source_gene_common_name=ENSG00000305658;source_gene=ENSG00000305658.1;alternative_source_transcripts=ENST00000765189.1;gene_id=CHM13_chrY_G0000776;gene_biotype=lncRNA;gene_name=ENSG00000305658;gene_sources=liftoff;ID=CHM13_chrY_G0000776;Name=ENSG00000305658
CHM13_chrY	CAT	transcript	26921916	26927371	1000	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=CHM13_chrY_T0002015;gene_id=CHM13_chrY_G0000776;Parent=CHM13_chrY_G0000776;transcript_name=CHM13_chrY_T0002015;gene_name=ENSG00000305658;ID=CHM13_chrY_T0002015;Name=ENSG00000305658
CHM13_chrY	CAT	exon	26921916	26922254	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=CHM13_chrY_T0002015;gene_id=CHM13_chrY_G0000776;Parent=CHM13_chrY_T0002015;transcript_name=CHM13_chrY_T0002015;gene_name=ENSG00000305658;ID=exon:CHM13_chrY_T0002015:0;Name=ENSG00000305658;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26922255	26924172	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=CHM13_chrY_T0002015;gene_id=CHM13_chrY_G0000776;Parent=CHM13_chrY_T0002015;transcript_name=CHM13_chrY_T0002015;gene_name=ENSG00000305658;ID=intron:CHM13_chrY_T0002015:0;Name=ENSG00000305658;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26924173	26924306	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=CHM13_chrY_T0002015;gene_id=CHM13_chrY_G0000776;Parent=CHM13_chrY_T0002015;transcript_name=CHM13_chrY_T0002015;gene_name=ENSG00000305658;ID=exon:CHM13_chrY_T0002015:1;Name=ENSG00000305658;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26924307	26926174	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=CHM13_chrY_T0002015;gene_id=CHM13_chrY_G0000776;Parent=CHM13_chrY_T0002015;transcript_name=CHM13_chrY_T0002015;gene_name=ENSG00000305658;ID=intron:CHM13_chrY_T0002015:1;Name=ENSG00000305658;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26926175	26926301	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=CHM13_chrY_T0002015;gene_id=CHM13_chrY_G0000776;Parent=CHM13_chrY_T0002015;transcript_name=CHM13_chrY_T0002015;gene_name=ENSG00000305658;ID=exon:CHM13_chrY_T0002015:2;Name=ENSG00000305658;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26926302	26926665	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=CHM13_chrY_T0002015;gene_id=CHM13_chrY_G0000776;Parent=CHM13_chrY_T0002015;transcript_name=CHM13_chrY_T0002015;gene_name=ENSG00000305658;ID=intron:CHM13_chrY_T0002015:2;Name=ENSG00000305658;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26926666	26927371	.	+	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;alternative_source_transcripts=ENST00000765189.1;transcript_id=CHM13_chrY_T0002015;gene_id=CHM13_chrY_G0000776;Parent=CHM13_chrY_T0002015;transcript_name=CHM13_chrY_T0002015;gene_name=ENSG00000305658;ID=exon:CHM13_chrY_T0002015:3;Name=ENSG00000305658;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26931145	26932721	.	-	.	source_gene_common_name=ENSG00000236647;source_gene=ENSG00000236647.1;gene_id=CHM13_chrY_G0000777;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236647;gene_sources=liftoff;ID=CHM13_chrY_G0000777;Name=ENSG00000236647
CHM13_chrY	CAT	transcript	26931145	26932721	1000	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=CHM13_chrY_T0002016;gene_id=CHM13_chrY_G0000777;Parent=CHM13_chrY_G0000777;transcript_name=CHM13_chrY_T0002016;gene_name=ENSG00000236647;ID=CHM13_chrY_T0002016;Name=ENSG00000236647
CHM13_chrY	CAT	exon	26931145	26931220	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=CHM13_chrY_T0002016;gene_id=CHM13_chrY_G0000777;Parent=CHM13_chrY_T0002016;transcript_name=CHM13_chrY_T0002016;gene_name=ENSG00000236647;ID=exon:CHM13_chrY_T0002016:0;Name=ENSG00000236647;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26931221	26931337	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=CHM13_chrY_T0002016;gene_id=CHM13_chrY_G0000777;Parent=CHM13_chrY_T0002016;transcript_name=CHM13_chrY_T0002016;gene_name=ENSG00000236647;ID=intron:CHM13_chrY_T0002016:0;Name=ENSG00000236647;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26931338	26931477	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=CHM13_chrY_T0002016;gene_id=CHM13_chrY_G0000777;Parent=CHM13_chrY_T0002016;transcript_name=CHM13_chrY_T0002016;gene_name=ENSG00000236647;ID=exon:CHM13_chrY_T0002016:1;Name=ENSG00000236647;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26931478	26931572	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=CHM13_chrY_T0002016;gene_id=CHM13_chrY_G0000777;Parent=CHM13_chrY_T0002016;transcript_name=CHM13_chrY_T0002016;gene_name=ENSG00000236647;ID=intron:CHM13_chrY_T0002016:1;Name=ENSG00000236647;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26931573	26931647	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=CHM13_chrY_T0002016;gene_id=CHM13_chrY_G0000777;Parent=CHM13_chrY_T0002016;transcript_name=CHM13_chrY_T0002016;gene_name=ENSG00000236647;ID=exon:CHM13_chrY_T0002016:2;Name=ENSG00000236647;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26931648	26931876	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=CHM13_chrY_T0002016;gene_id=CHM13_chrY_G0000777;Parent=CHM13_chrY_T0002016;transcript_name=CHM13_chrY_T0002016;gene_name=ENSG00000236647;ID=intron:CHM13_chrY_T0002016:2;Name=ENSG00000236647;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26931877	26931915	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=CHM13_chrY_T0002016;gene_id=CHM13_chrY_G0000777;Parent=CHM13_chrY_T0002016;transcript_name=CHM13_chrY_T0002016;gene_name=ENSG00000236647;ID=exon:CHM13_chrY_T0002016:3;Name=ENSG00000236647;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26931916	26932379	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=CHM13_chrY_T0002016;gene_id=CHM13_chrY_G0000777;Parent=CHM13_chrY_T0002016;transcript_name=CHM13_chrY_T0002016;gene_name=ENSG00000236647;ID=intron:CHM13_chrY_T0002016:3;Name=ENSG00000236647;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26932380	26932721	.	-	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;transcript_id=CHM13_chrY_T0002016;gene_id=CHM13_chrY_G0000777;Parent=CHM13_chrY_T0002016;transcript_name=CHM13_chrY_T0002016;gene_name=ENSG00000236647;ID=exon:CHM13_chrY_T0002016:4;Name=ENSG00000236647;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26933586	26943432	.	+	.	source_gene_common_name=ENSG00000293249;source_gene=ENSG00000293249.2;gene_id=CHM13_chrY_G0000778;gene_biotype=lncRNA;gene_name=ENSG00000293249;gene_sources=liftoff;ID=CHM13_chrY_G0000778;Name=ENSG00000293249
CHM13_chrY	CAT	transcript	26933586	26943432	1000	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_G0000778;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=CHM13_chrY_T0002017;Name=ENSG00000293249
CHM13_chrY	CAT	exon	26933586	26933735	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002017;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002017:0;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26933736	26934489	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002017;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002017:0;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26934490	26934569	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002017;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002017:1;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26934570	26935583	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002017;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002017:1;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26935584	26935696	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002017;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002017:2;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26935697	26936149	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002017;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002017:2;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26936150	26936253	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002017;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002017:3;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26936254	26938961	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002017;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002017:3;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26938962	26939139	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002017;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002017:4;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26939140	26941074	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002017;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002017:4;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26941075	26941227	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002017;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002017:5;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26941228	26943234	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002017;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002017:5;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26943235	26943432	.	+	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002017;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002017;transcript_name=CHM13_chrY_T0002017;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002017:6;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26933605	26942065	1000	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_G0000778;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=CHM13_chrY_T0002018;Name=ENSG00000293249
CHM13_chrY	CAT	exon	26933605	26933735	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002018;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002018:0;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26933736	26934489	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002018;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002018:0;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26934490	26934569	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002018;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002018:1;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26934570	26935583	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002018;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002018:1;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26935584	26935696	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002018;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002018:2;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26935697	26936149	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002018;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002018:2;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26936150	26936253	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002018;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002018:3;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26936254	26938961	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002018;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002018:3;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26938962	26939139	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002018;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002018:4;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26939140	26941074	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002018;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002018:4;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26941075	26941227	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002018;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002018:5;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26941228	26941805	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002018;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002018:5;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26941806	26942065	.	+	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002018;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002018;transcript_name=CHM13_chrY_T0002018;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002018:6;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	26933614	26942065	1000	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_G0000778;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=CHM13_chrY_T0002019;Name=ENSG00000293249
CHM13_chrY	CAT	exon	26933614	26933735	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002019;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002019:0;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26933736	26934386	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002019;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002019:0;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26934387	26934569	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002019;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002019:1;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26934570	26935583	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002019;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002019:1;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26935584	26935696	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002019;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002019:2;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26935697	26936149	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002019;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002019:2;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26936150	26936253	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002019;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002019:3;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26936254	26938961	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002019;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002019:3;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26938962	26939139	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002019;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002019:4;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26939140	26941074	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002019;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002019:4;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26941075	26941227	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002019;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002019:5;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26941228	26941805	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002019;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=intron:CHM13_chrY_T0002019:5;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26941806	26942065	.	+	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;transcript_id=CHM13_chrY_T0002019;gene_id=CHM13_chrY_G0000778;Parent=CHM13_chrY_T0002019;transcript_name=CHM13_chrY_T0002019;gene_name=ENSG00000293249;ID=exon:CHM13_chrY_T0002019:6;Name=ENSG00000293249;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26935588	26945222	.	+	.	source_gene_common_name=RBMY2CP;source_gene=ENSG00000215540.11;gene_id=CHM13_chrY_G0000779;gene_biotype=transcribed_processed_pseudogene;gene_name=RBMY2CP;gene_sources=liftoff;ID=CHM13_chrY_G0000779;Name=RBMY2CP
CHM13_chrY	CAT	transcript	26935588	26945222	1000	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_G0000779;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=CHM13_chrY_T0002020;Name=RBMY2CP
CHM13_chrY	CAT	exon	26935588	26935696	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=exon:CHM13_chrY_T0002020:0;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26935697	26936149	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=intron:CHM13_chrY_T0002020:0;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26936150	26936253	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=exon:CHM13_chrY_T0002020:1;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26936254	26938961	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=intron:CHM13_chrY_T0002020:1;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26938962	26939139	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=exon:CHM13_chrY_T0002020:2;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26939140	26941074	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=intron:CHM13_chrY_T0002020:2;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26941075	26941227	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=exon:CHM13_chrY_T0002020:3;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26941228	26943234	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=intron:CHM13_chrY_T0002020:3;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26943235	26943349	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=exon:CHM13_chrY_T0002020:4;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26943350	26944218	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=intron:CHM13_chrY_T0002020:4;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26944219	26944329	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=exon:CHM13_chrY_T0002020:5;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26944330	26944411	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=intron:CHM13_chrY_T0002020:5;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26944412	26944499	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=exon:CHM13_chrY_T0002020:6;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26944500	26944923	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=intron:CHM13_chrY_T0002020:6;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26944924	26945222	.	+	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=CHM13_chrY_T0002020;gene_id=CHM13_chrY_G0000779;Parent=CHM13_chrY_T0002020;transcript_name=CHM13_chrY_T0002020;gene_name=RBMY2CP;ID=exon:CHM13_chrY_T0002020:7;Name=RBMY2CP;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	26957161	26959209	.	-	.	source_gene_common_name=ENSG00000230073;source_gene=ENSG00000230073.1;gene_id=CHM13_chrY_G0000780;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000230073;gene_sources=liftoff;ID=CHM13_chrY_G0000780;Name=ENSG00000230073
CHM13_chrY	CAT	transcript	26957161	26959209	1000	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=CHM13_chrY_T0002021;gene_id=CHM13_chrY_G0000780;Parent=CHM13_chrY_G0000780;transcript_name=CHM13_chrY_T0002021;gene_name=ENSG00000230073;ID=CHM13_chrY_T0002021;Name=ENSG00000230073
CHM13_chrY	CAT	exon	26957161	26957304	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=CHM13_chrY_T0002021;gene_id=CHM13_chrY_G0000780;Parent=CHM13_chrY_T0002021;transcript_name=CHM13_chrY_T0002021;gene_name=ENSG00000230073;ID=exon:CHM13_chrY_T0002021:0;Name=ENSG00000230073;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26957305	26957396	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=CHM13_chrY_T0002021;gene_id=CHM13_chrY_G0000780;Parent=CHM13_chrY_T0002021;transcript_name=CHM13_chrY_T0002021;gene_name=ENSG00000230073;ID=intron:CHM13_chrY_T0002021:0;Name=ENSG00000230073;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26957397	26957520	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=CHM13_chrY_T0002021;gene_id=CHM13_chrY_G0000780;Parent=CHM13_chrY_T0002021;transcript_name=CHM13_chrY_T0002021;gene_name=ENSG00000230073;ID=exon:CHM13_chrY_T0002021:1;Name=ENSG00000230073;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26957521	26957720	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=CHM13_chrY_T0002021;gene_id=CHM13_chrY_G0000780;Parent=CHM13_chrY_T0002021;transcript_name=CHM13_chrY_T0002021;gene_name=ENSG00000230073;ID=intron:CHM13_chrY_T0002021:1;Name=ENSG00000230073;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26957721	26957777	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=CHM13_chrY_T0002021;gene_id=CHM13_chrY_G0000780;Parent=CHM13_chrY_T0002021;transcript_name=CHM13_chrY_T0002021;gene_name=ENSG00000230073;ID=exon:CHM13_chrY_T0002021:2;Name=ENSG00000230073;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	26957778	26958807	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=CHM13_chrY_T0002021;gene_id=CHM13_chrY_G0000780;Parent=CHM13_chrY_T0002021;transcript_name=CHM13_chrY_T0002021;gene_name=ENSG00000230073;ID=intron:CHM13_chrY_T0002021:2;Name=ENSG00000230073;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	26958808	26959209	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=CHM13_chrY_T0002021;gene_id=CHM13_chrY_G0000780;Parent=CHM13_chrY_T0002021;transcript_name=CHM13_chrY_T0002021;gene_name=ENSG00000230073;ID=exon:CHM13_chrY_T0002021:3;Name=ENSG00000230073;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27010241	27020056	.	-	.	source_gene_common_name=REREP1Y;source_gene=ENSG00000225189.1;gene_id=CHM13_chrY_G0000781;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=REREP1Y;gene_sources=liftoff;ID=CHM13_chrY_G0000781;Name=REREP1Y
CHM13_chrY	CAT	transcript	27010241	27020056	1000	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=CHM13_chrY_T0002022;gene_id=CHM13_chrY_G0000781;Parent=CHM13_chrY_G0000781;transcript_name=CHM13_chrY_T0002022;gene_name=REREP1Y;ID=CHM13_chrY_T0002022;Name=REREP1Y
CHM13_chrY	CAT	exon	27010241	27010367	.	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=CHM13_chrY_T0002022;gene_id=CHM13_chrY_G0000781;Parent=CHM13_chrY_T0002022;transcript_name=CHM13_chrY_T0002022;gene_name=REREP1Y;ID=exon:CHM13_chrY_T0002022:0;Name=REREP1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27010368	27019985	.	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=CHM13_chrY_T0002022;gene_id=CHM13_chrY_G0000781;Parent=CHM13_chrY_T0002022;transcript_name=CHM13_chrY_T0002022;gene_name=REREP1Y;ID=intron:CHM13_chrY_T0002022:0;Name=REREP1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27019986	27020056	.	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=CHM13_chrY_T0002022;gene_id=CHM13_chrY_G0000781;Parent=CHM13_chrY_T0002022;transcript_name=CHM13_chrY_T0002022;gene_name=REREP1Y;ID=exon:CHM13_chrY_T0002022:1;Name=REREP1Y;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27046517	27046618	.	-	.	source_gene_common_name=ENSG00000289705;source_gene=ENSG00000289705.1;alternative_source_transcripts=ENST00000696462.1;gene_id=CHM13_chrY_G0000782;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000289705;gene_sources=liftoff;ID=CHM13_chrY_G0000782;Name=ENSG00000289705
CHM13_chrY	CAT	transcript	27046517	27046618	1000	-	.	source_transcript=ENST00000696462.1;source_transcript_name=ENST00000696462;source_gene=ENSG00000289705.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289705.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289705;alternative_source_transcripts=ENST00000696462.1;transcript_id=CHM13_chrY_T0002023;gene_id=CHM13_chrY_G0000782;Parent=CHM13_chrY_G0000782;transcript_name=CHM13_chrY_T0002023;gene_name=ENSG00000289705;ID=CHM13_chrY_T0002023;Name=ENSG00000289705
CHM13_chrY	CAT	exon	27046517	27046618	.	-	.	source_transcript=ENST00000696462.1;source_transcript_name=ENST00000696462;source_gene=ENSG00000289705.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289705.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289705;alternative_source_transcripts=ENST00000696462.1;transcript_id=CHM13_chrY_T0002023;gene_id=CHM13_chrY_G0000782;Parent=CHM13_chrY_T0002023;transcript_name=CHM13_chrY_T0002023;gene_name=ENSG00000289705;ID=exon:CHM13_chrY_T0002023:0;Name=ENSG00000289705;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27056252	27056474	.	-	.	source_gene_common_name=ENSG00000225876;source_gene=ENSG00000225876.1;alternative_source_transcripts=ENST00000426199.1;gene_id=CHM13_chrY_G0000783;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000225876;gene_sources=liftoff;ID=CHM13_chrY_G0000783;Name=ENSG00000225876
CHM13_chrY	CAT	transcript	27056252	27056474	1000	-	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;alternative_source_transcripts=ENST00000426199.1;transcript_id=CHM13_chrY_T0002024;gene_id=CHM13_chrY_G0000783;Parent=CHM13_chrY_G0000783;transcript_name=CHM13_chrY_T0002024;gene_name=ENSG00000225876;ID=CHM13_chrY_T0002024;Name=ENSG00000225876
CHM13_chrY	CAT	exon	27056252	27056474	.	-	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;alternative_source_transcripts=ENST00000426199.1;transcript_id=CHM13_chrY_T0002024;gene_id=CHM13_chrY_G0000783;Parent=CHM13_chrY_T0002024;transcript_name=CHM13_chrY_T0002024;gene_name=ENSG00000225876;ID=exon:CHM13_chrY_T0002024:0;Name=ENSG00000225876;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27059285	27059422	.	+	.	source_gene_common_name=SNORA70;source_gene=ENSG00000251796.1;alternative_source_transcripts=ENST00000515987.1;gene_id=CHM13_chrY_G0000784;gene_biotype=snoRNA;gene_name=SNORA70;gene_sources=liftoff;ID=CHM13_chrY_G0000784;Name=SNORA70
CHM13_chrY	CAT	transcript	27059285	27059422	1000	+	.	source_transcript=ENST00000515987.1;source_transcript_name=SNORA70.11-201;source_gene=ENSG00000251796.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251796.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000515987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515987.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000515987.1;transcript_id=CHM13_chrY_T0002025;gene_id=CHM13_chrY_G0000784;Parent=CHM13_chrY_G0000784;transcript_name=CHM13_chrY_T0002025;gene_name=SNORA70;ID=CHM13_chrY_T0002025;Name=SNORA70
CHM13_chrY	CAT	exon	27059285	27059422	.	+	.	source_transcript=ENST00000515987.1;source_transcript_name=SNORA70.11-201;source_gene=ENSG00000251796.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251796.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000515987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515987.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000515987.1;transcript_id=CHM13_chrY_T0002025;gene_id=CHM13_chrY_G0000784;Parent=CHM13_chrY_T0002025;transcript_name=CHM13_chrY_T0002025;gene_name=SNORA70;ID=exon:CHM13_chrY_T0002025:0;Name=SNORA70;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27089824	27166319	.	-	.	source_gene_common_name=PPP1R12BP1;source_gene=ENSG00000229238.3;gene_id=CHM13_chrY_G0000785;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=PPP1R12BP1;gene_sources=liftoff;ID=CHM13_chrY_G0000785;Name=PPP1R12BP1
CHM13_chrY	CAT	transcript	27089824	27166319	1000	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_G0000785;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=CHM13_chrY_T0002026;Name=PPP1R12BP1
CHM13_chrY	CAT	exon	27089824	27089865	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=exon:CHM13_chrY_T0002026:0;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27089866	27090965	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=intron:CHM13_chrY_T0002026:0;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27090966	27091078	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=exon:CHM13_chrY_T0002026:1;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27091079	27091166	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=intron:CHM13_chrY_T0002026:1;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27091167	27091356	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=exon:CHM13_chrY_T0002026:2;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27091357	27093326	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=intron:CHM13_chrY_T0002026:2;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27093327	27093530	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=exon:CHM13_chrY_T0002026:3;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27093531	27102947	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=intron:CHM13_chrY_T0002026:3;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27102948	27103037	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=exon:CHM13_chrY_T0002026:4;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27103038	27140850	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=intron:CHM13_chrY_T0002026:4;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27140851	27141033	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=exon:CHM13_chrY_T0002026:5;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27141034	27144830	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=intron:CHM13_chrY_T0002026:5;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27144831	27144970	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=exon:CHM13_chrY_T0002026:6;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27144971	27145626	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=intron:CHM13_chrY_T0002026:6;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27145627	27145706	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=exon:CHM13_chrY_T0002026:7;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27145707	27147547	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=intron:CHM13_chrY_T0002026:7;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27147548	27147621	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=exon:CHM13_chrY_T0002026:8;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27147622	27149278	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=intron:CHM13_chrY_T0002026:8;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27149279	27149423	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=exon:CHM13_chrY_T0002026:9;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27149424	27150736	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=intron:CHM13_chrY_T0002026:9;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27150737	27150896	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=exon:CHM13_chrY_T0002026:10;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27150897	27160361	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=intron:CHM13_chrY_T0002026:10;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27160362	27160480	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=exon:CHM13_chrY_T0002026:11;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27160481	27166188	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=intron:CHM13_chrY_T0002026:11;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27166189	27166319	.	-	.	source_transcript=ENST00000367272.4;source_transcript_name=PPP1R12BP1-201;source_gene=ENSG00000229238.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229238.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000367272.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000367272.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP1;transcript_id=CHM13_chrY_T0002026;gene_id=CHM13_chrY_G0000785;Parent=CHM13_chrY_T0002026;transcript_name=CHM13_chrY_T0002026;gene_name=PPP1R12BP1;ID=exon:CHM13_chrY_T0002026:12;Name=PPP1R12BP1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27172890	27172993	.	+	.	source_gene_common_name=RNU6-1314P;source_gene=ENSG00000252948.1;alternative_source_transcripts=ENST00000517139.1;gene_id=CHM13_chrY_G0000786;gene_biotype=snRNA;gene_name=RNU6-1314P;gene_sources=liftoff;ID=CHM13_chrY_G0000786;Name=RNU6-1314P
CHM13_chrY	CAT	transcript	27172890	27172993	1000	+	.	source_transcript=ENST00000517139.1;source_transcript_name=RNU6-1314P-201;source_gene=ENSG00000252948.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252948.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517139.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1314P;alternative_source_transcripts=ENST00000517139.1;transcript_id=CHM13_chrY_T0002027;gene_id=CHM13_chrY_G0000786;Parent=CHM13_chrY_G0000786;transcript_name=CHM13_chrY_T0002027;gene_name=RNU6-1314P;ID=CHM13_chrY_T0002027;Name=RNU6-1314P
CHM13_chrY	CAT	exon	27172890	27172993	.	+	.	source_transcript=ENST00000517139.1;source_transcript_name=RNU6-1314P-201;source_gene=ENSG00000252948.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252948.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517139.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1314P;alternative_source_transcripts=ENST00000517139.1;transcript_id=CHM13_chrY_T0002027;gene_id=CHM13_chrY_G0000786;Parent=CHM13_chrY_T0002027;transcript_name=CHM13_chrY_T0002027;gene_name=RNU6-1314P;ID=exon:CHM13_chrY_T0002027:0;Name=RNU6-1314P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27212512	27213131	.	+	.	source_gene_common_name=CYCSP48;source_gene=ENSG00000233843.1;alternative_source_transcripts=ENST00000417124.1;gene_id=CHM13_chrY_G0000787;gene_biotype=processed_pseudogene;gene_name=CYCSP48;gene_sources=liftoff;ID=CHM13_chrY_G0000787;Name=CYCSP48
CHM13_chrY	CAT	transcript	27212512	27213131	1000	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1;transcript_id=CHM13_chrY_T0002028;gene_id=CHM13_chrY_G0000787;Parent=CHM13_chrY_G0000787;transcript_name=CHM13_chrY_T0002028;gene_name=CYCSP48;ID=CHM13_chrY_T0002028;Name=CYCSP48
CHM13_chrY	CAT	exon	27212512	27212562	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1;transcript_id=CHM13_chrY_T0002028;gene_id=CHM13_chrY_G0000787;Parent=CHM13_chrY_T0002028;transcript_name=CHM13_chrY_T0002028;gene_name=CYCSP48;ID=exon:CHM13_chrY_T0002028:0;Name=CYCSP48;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27212563	27212859	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1;transcript_id=CHM13_chrY_T0002028;gene_id=CHM13_chrY_G0000787;Parent=CHM13_chrY_T0002028;transcript_name=CHM13_chrY_T0002028;gene_name=CYCSP48;ID=intron:CHM13_chrY_T0002028:0;Name=CYCSP48;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27212860	27213131	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1;transcript_id=CHM13_chrY_T0002028;gene_id=CHM13_chrY_G0000787;Parent=CHM13_chrY_T0002028;transcript_name=CHM13_chrY_T0002028;gene_name=CYCSP48;ID=exon:CHM13_chrY_T0002028:1;Name=CYCSP48;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27221060	27320187	.	+	.	source_gene_common_name=ENSG00000294742;source_gene=ENSG00000294742.1;gene_id=CHM13_chrY_G0000788;gene_biotype=lncRNA;gene_name=ENSG00000294742;gene_sources=liftoff;ID=CHM13_chrY_G0000788;Name=ENSG00000294742
CHM13_chrY	CAT	transcript	27221060	27266021	1000	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002029;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_G0000788;transcript_name=CHM13_chrY_T0002029;gene_name=ENSG00000294742;ID=CHM13_chrY_T0002029;Name=ENSG00000294742
CHM13_chrY	CAT	exon	27221060	27221152	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002029;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002029;transcript_name=CHM13_chrY_T0002029;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002029:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221153	27221600	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002029;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002029;transcript_name=CHM13_chrY_T0002029;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002029:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27221601	27221847	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002029;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002029;transcript_name=CHM13_chrY_T0002029;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002029:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221848	27248864	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002029;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002029;transcript_name=CHM13_chrY_T0002029;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002029:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27248865	27248893	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002029;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002029;transcript_name=CHM13_chrY_T0002029;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002029:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27248894	27248987	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002029;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002029;transcript_name=CHM13_chrY_T0002029;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002029:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27248988	27249060	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002029;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002029;transcript_name=CHM13_chrY_T0002029;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002029:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27249061	27265917	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002029;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002029;transcript_name=CHM13_chrY_T0002029;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002029:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27265918	27266021	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002029;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002029;transcript_name=CHM13_chrY_T0002029;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002029:4;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	27221076	27250938	1000	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002030;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_G0000788;transcript_name=CHM13_chrY_T0002030;gene_name=ENSG00000294742;ID=CHM13_chrY_T0002030;Name=ENSG00000294742
CHM13_chrY	CAT	exon	27221076	27221152	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002030;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002030;transcript_name=CHM13_chrY_T0002030;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002030:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221153	27221600	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002030;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002030;transcript_name=CHM13_chrY_T0002030;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002030:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27221601	27221847	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002030;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002030;transcript_name=CHM13_chrY_T0002030;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002030:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221848	27248864	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002030;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002030;transcript_name=CHM13_chrY_T0002030;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002030:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27248865	27248893	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002030;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002030;transcript_name=CHM13_chrY_T0002030;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002030:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27248894	27250742	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002030;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002030;transcript_name=CHM13_chrY_T0002030;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002030:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27250743	27250938	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002030;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002030;transcript_name=CHM13_chrY_T0002030;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002030:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	27221081	27250872	1000	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002031;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_G0000788;transcript_name=CHM13_chrY_T0002031;gene_name=ENSG00000294742;ID=CHM13_chrY_T0002031;Name=ENSG00000294742
CHM13_chrY	CAT	exon	27221081	27221152	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002031;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002031;transcript_name=CHM13_chrY_T0002031;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002031:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221153	27221600	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002031;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002031;transcript_name=CHM13_chrY_T0002031;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002031:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27221601	27221847	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002031;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002031;transcript_name=CHM13_chrY_T0002031;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002031:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221848	27234910	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002031;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002031;transcript_name=CHM13_chrY_T0002031;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002031:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27234911	27234978	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002031;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002031;transcript_name=CHM13_chrY_T0002031;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002031:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27234979	27248864	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002031;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002031;transcript_name=CHM13_chrY_T0002031;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002031:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27248865	27248893	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002031;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002031;transcript_name=CHM13_chrY_T0002031;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002031:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27248894	27250742	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002031;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002031;transcript_name=CHM13_chrY_T0002031;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002031:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27250743	27250872	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002031;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002031;transcript_name=CHM13_chrY_T0002031;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002031:4;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	27221081	27250941	1000	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002032;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_G0000788;transcript_name=CHM13_chrY_T0002032;gene_name=ENSG00000294742;ID=CHM13_chrY_T0002032;Name=ENSG00000294742
CHM13_chrY	CAT	exon	27221081	27221152	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002032;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002032;transcript_name=CHM13_chrY_T0002032;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002032:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221153	27221600	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002032;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002032;transcript_name=CHM13_chrY_T0002032;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002032:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27221601	27221847	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002032;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002032;transcript_name=CHM13_chrY_T0002032;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002032:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221848	27248864	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002032;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002032;transcript_name=CHM13_chrY_T0002032;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002032:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27248865	27248893	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002032;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002032;transcript_name=CHM13_chrY_T0002032;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002032:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27248894	27248987	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002032;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002032;transcript_name=CHM13_chrY_T0002032;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002032:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27248988	27249060	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002032;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002032;transcript_name=CHM13_chrY_T0002032;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002032:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27249061	27250742	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002032;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002032;transcript_name=CHM13_chrY_T0002032;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002032:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27250743	27250941	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002032;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002032;transcript_name=CHM13_chrY_T0002032;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002032:4;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	27221081	27320187	1000	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_G0000788;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=CHM13_chrY_T0002033;Name=ENSG00000294742
CHM13_chrY	CAT	exon	27221081	27221152	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002033:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221153	27221600	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002033:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27221601	27221847	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002033:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221848	27248864	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002033:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27248865	27248893	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002033:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27248894	27250864	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002033:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27250865	27250937	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002033:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27250938	27252703	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002033:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27252704	27252734	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002033:4;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27252735	27254519	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002033:4;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27254520	27254695	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002033:5;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27254696	27265917	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002033:5;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27265918	27266021	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002033:6;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27266022	27320153	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002033:6;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27320154	27320187	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002033;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002033;transcript_name=CHM13_chrY_T0002033;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002033:7;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	27221103	27266006	1000	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002034;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_G0000788;transcript_name=CHM13_chrY_T0002034;gene_name=ENSG00000294742;ID=CHM13_chrY_T0002034;Name=ENSG00000294742
CHM13_chrY	CAT	exon	27221103	27221152	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002034;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002034;transcript_name=CHM13_chrY_T0002034;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002034:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221153	27221600	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002034;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002034;transcript_name=CHM13_chrY_T0002034;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002034:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27221601	27221847	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002034;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002034;transcript_name=CHM13_chrY_T0002034;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002034:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221848	27248864	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002034;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002034;transcript_name=CHM13_chrY_T0002034;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002034:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27248865	27248893	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002034;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002034;transcript_name=CHM13_chrY_T0002034;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002034:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27248894	27265917	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002034;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002034;transcript_name=CHM13_chrY_T0002034;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002034:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27265918	27266006	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002034;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002034;transcript_name=CHM13_chrY_T0002034;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002034:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	27221107	27250882	1000	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_G0000788;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=CHM13_chrY_T0002035;Name=ENSG00000294742
CHM13_chrY	CAT	exon	27221107	27221152	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002035:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221153	27221600	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002035:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27221601	27221847	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002035:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221848	27232323	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002035:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27232324	27232461	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002035:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27232462	27234910	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002035:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27234911	27234978	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002035:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27234979	27238336	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002035:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27238337	27238493	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002035:4;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27238494	27248864	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002035:4;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27248865	27248893	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002035:5;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27248894	27248987	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002035:5;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27248988	27249060	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002035:6;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27249061	27250742	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002035:6;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27250743	27250882	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002035;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002035;transcript_name=CHM13_chrY_T0002035;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002035:7;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	27221155	27250926	1000	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002036;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_G0000788;transcript_name=CHM13_chrY_T0002036;gene_name=ENSG00000294742;ID=CHM13_chrY_T0002036;Name=ENSG00000294742
CHM13_chrY	CAT	exon	27221155	27221252	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002036;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002036;transcript_name=CHM13_chrY_T0002036;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002036:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221253	27221600	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002036;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002036;transcript_name=CHM13_chrY_T0002036;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002036:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27221601	27221847	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002036;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002036;transcript_name=CHM13_chrY_T0002036;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002036:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221848	27248864	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002036;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002036;transcript_name=CHM13_chrY_T0002036;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002036:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27248865	27248893	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002036;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002036;transcript_name=CHM13_chrY_T0002036;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002036:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27248894	27250742	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002036;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002036;transcript_name=CHM13_chrY_T0002036;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002036:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27250743	27250926	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002036;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002036;transcript_name=CHM13_chrY_T0002036;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002036:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	27221600	27266008	1000	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002037;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_G0000788;transcript_name=CHM13_chrY_T0002037;gene_name=ENSG00000294742;ID=CHM13_chrY_T0002037;Name=ENSG00000294742
CHM13_chrY	CAT	exon	27221600	27221847	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002037;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002037;transcript_name=CHM13_chrY_T0002037;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002037:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221848	27248864	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002037;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002037;transcript_name=CHM13_chrY_T0002037;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002037:0;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27248865	27248893	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002037;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002037;transcript_name=CHM13_chrY_T0002037;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002037:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27248894	27250864	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002037;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002037;transcript_name=CHM13_chrY_T0002037;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002037:1;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27250865	27250937	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002037;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002037;transcript_name=CHM13_chrY_T0002037;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002037:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27250938	27252703	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002037;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002037;transcript_name=CHM13_chrY_T0002037;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002037:2;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27252704	27252734	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002037;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002037;transcript_name=CHM13_chrY_T0002037;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002037:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27252735	27254516	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002037;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002037;transcript_name=CHM13_chrY_T0002037;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002037:3;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27254517	27254695	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002037;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002037;transcript_name=CHM13_chrY_T0002037;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002037:4;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27254696	27265917	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002037;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002037;transcript_name=CHM13_chrY_T0002037;gene_name=ENSG00000294742;ID=intron:CHM13_chrY_T0002037:4;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27265918	27266008	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=CHM13_chrY_T0002037;gene_id=CHM13_chrY_G0000788;Parent=CHM13_chrY_T0002037;transcript_name=CHM13_chrY_T0002037;gene_name=ENSG00000294742;ID=exon:CHM13_chrY_T0002037:5;Name=ENSG00000294742;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27221717	27232465	.	+	.	source_gene_common_name=ANKRD36P1;source_gene=ENSG00000188399.5;gene_id=CHM13_chrY_G0000789;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ANKRD36P1;gene_sources=liftoff;ID=CHM13_chrY_G0000789;Name=ANKRD36P1
CHM13_chrY	CAT	transcript	27221717	27232465	1000	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=CHM13_chrY_T0002038;gene_id=CHM13_chrY_G0000789;Parent=CHM13_chrY_G0000789;transcript_name=CHM13_chrY_T0002038;gene_name=ANKRD36P1;ID=CHM13_chrY_T0002038;Name=ANKRD36P1
CHM13_chrY	CAT	exon	27221717	27221847	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=CHM13_chrY_T0002038;gene_id=CHM13_chrY_G0000789;Parent=CHM13_chrY_T0002038;transcript_name=CHM13_chrY_T0002038;gene_name=ANKRD36P1;ID=exon:CHM13_chrY_T0002038:0;Name=ANKRD36P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27221848	27225949	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=CHM13_chrY_T0002038;gene_id=CHM13_chrY_G0000789;Parent=CHM13_chrY_T0002038;transcript_name=CHM13_chrY_T0002038;gene_name=ANKRD36P1;ID=intron:CHM13_chrY_T0002038:0;Name=ANKRD36P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27225950	27226064	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=CHM13_chrY_T0002038;gene_id=CHM13_chrY_G0000789;Parent=CHM13_chrY_T0002038;transcript_name=CHM13_chrY_T0002038;gene_name=ANKRD36P1;ID=exon:CHM13_chrY_T0002038:1;Name=ANKRD36P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27226065	27226230	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=CHM13_chrY_T0002038;gene_id=CHM13_chrY_G0000789;Parent=CHM13_chrY_T0002038;transcript_name=CHM13_chrY_T0002038;gene_name=ANKRD36P1;ID=intron:CHM13_chrY_T0002038:1;Name=ANKRD36P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27226231	27226404	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=CHM13_chrY_T0002038;gene_id=CHM13_chrY_G0000789;Parent=CHM13_chrY_T0002038;transcript_name=CHM13_chrY_T0002038;gene_name=ANKRD36P1;ID=exon:CHM13_chrY_T0002038:2;Name=ANKRD36P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27226405	27230745	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=CHM13_chrY_T0002038;gene_id=CHM13_chrY_G0000789;Parent=CHM13_chrY_T0002038;transcript_name=CHM13_chrY_T0002038;gene_name=ANKRD36P1;ID=intron:CHM13_chrY_T0002038:2;Name=ANKRD36P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27230746	27230842	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=CHM13_chrY_T0002038;gene_id=CHM13_chrY_G0000789;Parent=CHM13_chrY_T0002038;transcript_name=CHM13_chrY_T0002038;gene_name=ANKRD36P1;ID=exon:CHM13_chrY_T0002038:3;Name=ANKRD36P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27230843	27232323	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=CHM13_chrY_T0002038;gene_id=CHM13_chrY_G0000789;Parent=CHM13_chrY_T0002038;transcript_name=CHM13_chrY_T0002038;gene_name=ANKRD36P1;ID=intron:CHM13_chrY_T0002038:3;Name=ANKRD36P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27232324	27232465	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=CHM13_chrY_T0002038;gene_id=CHM13_chrY_G0000789;Parent=CHM13_chrY_T0002038;transcript_name=CHM13_chrY_T0002038;gene_name=ANKRD36P1;ID=exon:CHM13_chrY_T0002038:4;Name=ANKRD36P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27265915	27266025	.	+	.	source_gene_common_name=ENSG00000277146;source_gene=ENSG00000277146.1;gene_id=CHM13_chrY_G0000790;gene_biotype=transcribed_processed_pseudogene;gene_name=ENSG00000277146;gene_sources=liftoff;ID=CHM13_chrY_G0000790;Name=ENSG00000277146
CHM13_chrY	CAT	transcript	27265915	27266025	1000	+	.	source_transcript=ENST00000619329.1;source_transcript_name=ENST00000619329;source_gene=ENSG00000277146.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000277146.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000619329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277146;transcript_id=CHM13_chrY_T0002039;gene_id=CHM13_chrY_G0000790;Parent=CHM13_chrY_G0000790;transcript_name=CHM13_chrY_T0002039;gene_name=ENSG00000277146;ID=CHM13_chrY_T0002039;Name=ENSG00000277146
CHM13_chrY	CAT	exon	27265915	27266025	.	+	.	source_transcript=ENST00000619329.1;source_transcript_name=ENST00000619329;source_gene=ENSG00000277146.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000277146.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000619329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277146;transcript_id=CHM13_chrY_T0002039;gene_id=CHM13_chrY_G0000790;Parent=CHM13_chrY_T0002039;transcript_name=CHM13_chrY_T0002039;gene_name=ENSG00000277146;ID=exon:CHM13_chrY_T0002039:0;Name=ENSG00000277146;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27305531	27309491	.	+	.	source_gene_common_name=ENSG00000294758;source_gene=ENSG00000294758.1;alternative_source_transcripts=ENST00000725774.1;gene_id=CHM13_chrY_G0000791;gene_biotype=lncRNA;gene_name=ENSG00000294758;gene_sources=liftoff;ID=CHM13_chrY_G0000791;Name=ENSG00000294758
CHM13_chrY	CAT	transcript	27305531	27309491	1000	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=CHM13_chrY_T0002040;gene_id=CHM13_chrY_G0000791;Parent=CHM13_chrY_G0000791;transcript_name=CHM13_chrY_T0002040;gene_name=ENSG00000294758;ID=CHM13_chrY_T0002040;Name=ENSG00000294758
CHM13_chrY	CAT	exon	27305531	27305569	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=CHM13_chrY_T0002040;gene_id=CHM13_chrY_G0000791;Parent=CHM13_chrY_T0002040;transcript_name=CHM13_chrY_T0002040;gene_name=ENSG00000294758;ID=exon:CHM13_chrY_T0002040:0;Name=ENSG00000294758;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27305570	27308811	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=CHM13_chrY_T0002040;gene_id=CHM13_chrY_G0000791;Parent=CHM13_chrY_T0002040;transcript_name=CHM13_chrY_T0002040;gene_name=ENSG00000294758;ID=intron:CHM13_chrY_T0002040:0;Name=ENSG00000294758;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27308812	27308868	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=CHM13_chrY_T0002040;gene_id=CHM13_chrY_G0000791;Parent=CHM13_chrY_T0002040;transcript_name=CHM13_chrY_T0002040;gene_name=ENSG00000294758;ID=exon:CHM13_chrY_T0002040:1;Name=ENSG00000294758;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27308869	27309227	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=CHM13_chrY_T0002040;gene_id=CHM13_chrY_G0000791;Parent=CHM13_chrY_T0002040;transcript_name=CHM13_chrY_T0002040;gene_name=ENSG00000294758;ID=intron:CHM13_chrY_T0002040:1;Name=ENSG00000294758;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27309228	27309491	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1;transcript_id=CHM13_chrY_T0002040;gene_id=CHM13_chrY_G0000791;Parent=CHM13_chrY_T0002040;transcript_name=CHM13_chrY_T0002040;gene_name=ENSG00000294758;ID=exon:CHM13_chrY_T0002040:2;Name=ENSG00000294758;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27320154	27391639	.	+	.	source_gene_common_name=TPTE2P4;source_gene=ENSG00000215506.5;gene_id=CHM13_chrY_G0000792;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TPTE2P4;gene_sources=liftoff;ID=CHM13_chrY_G0000792;Name=TPTE2P4
CHM13_chrY	CAT	transcript	27320154	27391639	1000	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_G0000792;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=CHM13_chrY_T0002041;Name=TPTE2P4
CHM13_chrY	CAT	exon	27320154	27320207	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:0;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27320208	27326996	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:0;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27326997	27327050	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:1;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27327051	27327595	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:1;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27327596	27327649	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:2;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27327650	27337791	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:2;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27337792	27337851	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:3;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27337852	27344724	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:3;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27344725	27344775	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:4;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27344776	27346263	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:4;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27346264	27346425	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:5;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27346426	27352909	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:5;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27352910	27353029	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:6;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27353030	27354682	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:6;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27354683	27354782	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:7;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27354783	27354928	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:7;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27354929	27354991	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:8;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27354992	27355723	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:8;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27355724	27355788	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:9;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27355789	27368937	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:9;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27368938	27369002	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:10;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27369003	27369823	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:10;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27369824	27369898	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:11;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27369899	27369996	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:11;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27369997	27370085	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:12;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27370086	27376267	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:12;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27376268	27376328	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:13;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27376329	27378129	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:13;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27378130	27378211	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:14;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27378212	27381811	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:14;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27381812	27381917	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:15;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27381918	27383834	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:15;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27383835	27383914	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:16;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27383915	27387875	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:16;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27387876	27387966	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:17;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27387967	27389375	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:17;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27389376	27389446	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:18;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27389447	27391537	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=intron:CHM13_chrY_T0002041:18;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27391538	27391639	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=CHM13_chrY_T0002041;gene_id=CHM13_chrY_G0000792;Parent=CHM13_chrY_T0002041;transcript_name=CHM13_chrY_T0002041;gene_name=TPTE2P4;ID=exon:CHM13_chrY_T0002041:19;Name=TPTE2P4;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27361365	27361683	.	+	.	source_gene_common_name=CYCSP49;source_gene=ENSG00000224240.1;alternative_source_transcripts=ENST00000420810.1;gene_id=CHM13_chrY_G0000793;gene_biotype=processed_pseudogene;gene_name=CYCSP49;gene_sources=liftoff;ID=CHM13_chrY_G0000793;Name=CYCSP49
CHM13_chrY	CAT	transcript	27361365	27361683	1000	+	.	source_transcript=ENST00000420810.1;source_transcript_name=CYCSP49-201;source_gene=ENSG00000224240.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224240.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420810.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP49;alternative_source_transcripts=ENST00000420810.1;transcript_id=CHM13_chrY_T0002042;gene_id=CHM13_chrY_G0000793;Parent=CHM13_chrY_G0000793;transcript_name=CHM13_chrY_T0002042;gene_name=CYCSP49;ID=CHM13_chrY_T0002042;Name=CYCSP49
CHM13_chrY	CAT	exon	27361365	27361683	.	+	.	source_transcript=ENST00000420810.1;source_transcript_name=CYCSP49-201;source_gene=ENSG00000224240.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224240.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP49;alternative_source_transcripts=ENST00000420810.1;transcript_id=CHM13_chrY_T0002042;gene_id=CHM13_chrY_G0000793;Parent=CHM13_chrY_T0002042;transcript_name=CHM13_chrY_T0002042;gene_name=CYCSP49;ID=exon:CHM13_chrY_T0002042:0;Name=CYCSP49;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27398593	27403552	.	-	.	source_gene_common_name=SLC25A15P1;source_gene=ENSG00000227629.1;alternative_source_transcripts=ENST00000456738.1;gene_id=CHM13_chrY_G0000794;gene_biotype=unprocessed_pseudogene;gene_name=SLC25A15P1;gene_sources=liftoff;ID=CHM13_chrY_G0000794;Name=SLC25A15P1
CHM13_chrY	CAT	transcript	27398593	27403552	1000	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=CHM13_chrY_T0002043;gene_id=CHM13_chrY_G0000794;Parent=CHM13_chrY_G0000794;transcript_name=CHM13_chrY_T0002043;gene_name=SLC25A15P1;ID=CHM13_chrY_T0002043;Name=SLC25A15P1
CHM13_chrY	CAT	exon	27398593	27398717	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=CHM13_chrY_T0002043;gene_id=CHM13_chrY_G0000794;Parent=CHM13_chrY_T0002043;transcript_name=CHM13_chrY_T0002043;gene_name=SLC25A15P1;ID=exon:CHM13_chrY_T0002043:0;Name=SLC25A15P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27398718	27399348	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=CHM13_chrY_T0002043;gene_id=CHM13_chrY_G0000794;Parent=CHM13_chrY_T0002043;transcript_name=CHM13_chrY_T0002043;gene_name=SLC25A15P1;ID=intron:CHM13_chrY_T0002043:0;Name=SLC25A15P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27399349	27399511	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=CHM13_chrY_T0002043;gene_id=CHM13_chrY_G0000794;Parent=CHM13_chrY_T0002043;transcript_name=CHM13_chrY_T0002043;gene_name=SLC25A15P1;ID=exon:CHM13_chrY_T0002043:1;Name=SLC25A15P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27399512	27403498	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=CHM13_chrY_T0002043;gene_id=CHM13_chrY_G0000794;Parent=CHM13_chrY_T0002043;transcript_name=CHM13_chrY_T0002043;gene_name=SLC25A15P1;ID=intron:CHM13_chrY_T0002043:1;Name=SLC25A15P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27403499	27403552	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1;transcript_id=CHM13_chrY_T0002043;gene_id=CHM13_chrY_G0000794;Parent=CHM13_chrY_T0002043;transcript_name=CHM13_chrY_T0002043;gene_name=SLC25A15P1;ID=exon:CHM13_chrY_T0002043:2;Name=SLC25A15P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27406802	27446608	.	-	.	source_gene_common_name=PARP4P1;source_gene=ENSG00000237917.1;alternative_source_transcripts=ENST00000435945.1;gene_id=CHM13_chrY_G0000795;gene_biotype=unprocessed_pseudogene;gene_name=PARP4P1;gene_sources=liftoff;ID=CHM13_chrY_G0000795;Name=PARP4P1
CHM13_chrY	CAT	transcript	27406802	27446608	1000	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_G0000795;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=CHM13_chrY_T0002044;Name=PARP4P1
CHM13_chrY	CAT	exon	27406802	27406996	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=exon:CHM13_chrY_T0002044:0;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27406997	27412841	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=intron:CHM13_chrY_T0002044:0;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27412842	27412973	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=exon:CHM13_chrY_T0002044:1;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27412974	27423664	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=intron:CHM13_chrY_T0002044:1;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27423665	27423759	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=exon:CHM13_chrY_T0002044:2;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27423760	27426105	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=intron:CHM13_chrY_T0002044:2;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27426106	27426914	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=exon:CHM13_chrY_T0002044:3;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27426915	27427246	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=intron:CHM13_chrY_T0002044:3;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27427247	27427484	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=exon:CHM13_chrY_T0002044:4;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27427485	27433726	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=intron:CHM13_chrY_T0002044:4;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27433727	27433849	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=exon:CHM13_chrY_T0002044:5;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27433850	27434465	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=intron:CHM13_chrY_T0002044:5;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27434466	27434562	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=exon:CHM13_chrY_T0002044:6;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27434563	27435539	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=intron:CHM13_chrY_T0002044:6;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27435540	27435620	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=exon:CHM13_chrY_T0002044:7;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27435621	27439896	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=intron:CHM13_chrY_T0002044:7;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27439897	27439976	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=exon:CHM13_chrY_T0002044:8;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27439977	27440224	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=intron:CHM13_chrY_T0002044:8;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27440225	27440391	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=exon:CHM13_chrY_T0002044:9;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27440392	27442600	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=intron:CHM13_chrY_T0002044:9;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27442601	27442703	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=exon:CHM13_chrY_T0002044:10;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27442704	27445300	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=intron:CHM13_chrY_T0002044:10;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27445301	27445387	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=exon:CHM13_chrY_T0002044:11;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	27445388	27446478	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=intron:CHM13_chrY_T0002044:11;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	27446479	27446608	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1;transcript_id=CHM13_chrY_T0002044;gene_id=CHM13_chrY_G0000795;Parent=CHM13_chrY_T0002044;transcript_name=CHM13_chrY_T0002044;gene_name=PARP4P1;ID=exon:CHM13_chrY_T0002044:12;Name=PARP4P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	27438474	27439113	.	-	.	source_gene_common_name=CCNQP2;source_gene=ENSG00000231514.1;alternative_source_transcripts=ENST00000435741.1;gene_id=CHM13_chrY_G0000796;gene_biotype=processed_pseudogene;gene_name=CCNQP2;gene_sources=liftoff;ID=CHM13_chrY_G0000796;Name=CCNQP2
CHM13_chrY	CAT	transcript	27438474	27439113	1000	-	.	source_transcript=ENST00000435741.1;source_transcript_name=CCNQP2-201;source_gene=ENSG00000231514.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231514.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435741.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CCNQP2;alternative_source_transcripts=ENST00000435741.1;transcript_id=CHM13_chrY_T0002045;gene_id=CHM13_chrY_G0000796;Parent=CHM13_chrY_G0000796;transcript_name=CHM13_chrY_T0002045;gene_name=CCNQP2;ID=CHM13_chrY_T0002045;Name=CCNQP2
CHM13_chrY	CAT	exon	27438474	27439113	.	-	.	source_transcript=ENST00000435741.1;source_transcript_name=CCNQP2-201;source_gene=ENSG00000231514.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231514.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CCNQP2;alternative_source_transcripts=ENST00000435741.1;transcript_id=CHM13_chrY_T0002045;gene_id=CHM13_chrY_G0000796;Parent=CHM13_chrY_T0002045;transcript_name=CHM13_chrY_T0002045;gene_name=CCNQP2;ID=exon:CHM13_chrY_T0002045:0;Name=CCNQP2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62090907	62091151	.	+	.	source_gene_common_name=CTBP2P1;source_gene=ENSG00000235857.1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;gene_id=CHM13_chrY_G0000797;gene_biotype=processed_pseudogene;gene_name=CTBP2P1;gene_sources=liftoff;ID=CHM13_chrY_G0000797;Name=CTBP2P1
CHM13_chrY	CAT	transcript	62090907	62091151	1000	+	.	source_transcript=ENST00000431853.1;source_transcript_name=CTBP2P1-201;source_gene=ENSG00000235857.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235857.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431853.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CTBP2P1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;transcript_id=CHM13_chrY_T0002046;gene_id=CHM13_chrY_G0000797;Parent=CHM13_chrY_G0000797;transcript_name=CHM13_chrY_T0002046;gene_name=CTBP2P1;ID=CHM13_chrY_T0002046;Name=CTBP2P1
CHM13_chrY	CAT	exon	62090907	62091151	.	+	.	source_transcript=ENST00000431853.1;source_transcript_name=CTBP2P1-201;source_gene=ENSG00000235857.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235857.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431853.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CTBP2P1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;transcript_id=CHM13_chrY_T0002046;gene_id=CHM13_chrY_G0000797;Parent=CHM13_chrY_T0002046;transcript_name=CHM13_chrY_T0002046;gene_name=CTBP2P1;ID=exon:CHM13_chrY_T0002046:0;Name=CTBP2P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62117513	62117779	.	+	.	source_gene_common_name=ENSG00000305394;source_gene=ENSG00000305394.1;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;gene_id=CHM13_chrY_G0000798;gene_biotype=lncRNA;gene_name=ENSG00000305394;gene_sources=liftoff;ID=CHM13_chrY_G0000798;Name=ENSG00000305394
CHM13_chrY	CAT	transcript	62117513	62117779	1000	+	.	source_transcript=ENST00000810723.1;source_transcript_name=ENST00000810723;source_gene=ENSG00000305394.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305394.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000810723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000810723.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305394;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;transcript_id=CHM13_chrY_T0002047;gene_id=CHM13_chrY_G0000798;Parent=CHM13_chrY_G0000798;transcript_name=CHM13_chrY_T0002047;gene_name=ENSG00000305394;ID=CHM13_chrY_T0002047;Name=ENSG00000305394
CHM13_chrY	CAT	exon	62117513	62117779	.	+	.	source_transcript=ENST00000810723.1;source_transcript_name=ENST00000810723;source_gene=ENSG00000305394.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305394.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000810723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000810723.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305394;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;transcript_id=CHM13_chrY_T0002047;gene_id=CHM13_chrY_G0000798;Parent=CHM13_chrY_T0002047;transcript_name=CHM13_chrY_T0002047;gene_name=ENSG00000305394;ID=exon:CHM13_chrY_T0002047:0;Name=ENSG00000305394;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62155111	62189746	.	-	.	source_gene_common_name=ENSG00000310550;source_gene=ENSG00000310550.1;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;gene_id=CHM13_chrY_G0000799;gene_biotype=lncRNA;gene_name=ENSG00000310550;gene_sources=liftoff;ID=CHM13_chrY_G0000799;Name=ENSG00000310550
CHM13_chrY	CAT	transcript	62155111	62189751	1000	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=CHM13_chrY_T0002048;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_G0000799;transcript_name=CHM13_chrY_T0002048;gene_name=ENSG00000310550;ID=CHM13_chrY_T0002048;Name=ENSG00000310550
CHM13_chrY	CAT	exon	62155111	62155214	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=CHM13_chrY_T0002048;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002048;transcript_name=CHM13_chrY_T0002048;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002048:0;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62155215	62159420	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=CHM13_chrY_T0002048;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002048;transcript_name=CHM13_chrY_T0002048;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002048:0;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62159421	62159556	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=CHM13_chrY_T0002048;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002048;transcript_name=CHM13_chrY_T0002048;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002048:1;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62159557	62161750	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=CHM13_chrY_T0002048;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002048;transcript_name=CHM13_chrY_T0002048;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002048:1;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62161751	62161927	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=CHM13_chrY_T0002048;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002048;transcript_name=CHM13_chrY_T0002048;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002048:2;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62161928	62180699	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=CHM13_chrY_T0002048;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002048;transcript_name=CHM13_chrY_T0002048;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002048:2;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62180700	62180850	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=CHM13_chrY_T0002048;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002048;transcript_name=CHM13_chrY_T0002048;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002048:3;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62180851	62189622	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=CHM13_chrY_T0002048;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002048;transcript_name=CHM13_chrY_T0002048;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002048:3;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62189623	62189751	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=CHM13_chrY_T0002048;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002048;transcript_name=CHM13_chrY_T0002048;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002048:4;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62155118	62189746	1000	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=CHM13_chrY_T0002049;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_G0000799;transcript_name=CHM13_chrY_T0002049;gene_name=ENSG00000310550;ID=CHM13_chrY_T0002049;Name=ENSG00000310550
CHM13_chrY	CAT	exon	62155118	62155214	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=CHM13_chrY_T0002049;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002049;transcript_name=CHM13_chrY_T0002049;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002049:0;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62155215	62159420	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=CHM13_chrY_T0002049;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002049;transcript_name=CHM13_chrY_T0002049;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002049:0;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62159421	62159556	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=CHM13_chrY_T0002049;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002049;transcript_name=CHM13_chrY_T0002049;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002049:1;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62159557	62161750	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=CHM13_chrY_T0002049;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002049;transcript_name=CHM13_chrY_T0002049;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002049:1;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62161751	62161927	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=CHM13_chrY_T0002049;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002049;transcript_name=CHM13_chrY_T0002049;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002049:2;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62161928	62180699	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=CHM13_chrY_T0002049;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002049;transcript_name=CHM13_chrY_T0002049;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002049:2;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62180700	62180850	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=CHM13_chrY_T0002049;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002049;transcript_name=CHM13_chrY_T0002049;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002049:3;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62180851	62189651	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=CHM13_chrY_T0002049;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002049;transcript_name=CHM13_chrY_T0002049;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002049:3;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62189652	62189746	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=CHM13_chrY_T0002049;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002049;transcript_name=CHM13_chrY_T0002049;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002049:4;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62155121	62189746	1000	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=CHM13_chrY_T0002050;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_G0000799;transcript_name=CHM13_chrY_T0002050;gene_name=ENSG00000310550;ID=CHM13_chrY_T0002050;Name=ENSG00000310550
CHM13_chrY	CAT	exon	62155121	62155214	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=CHM13_chrY_T0002050;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002050;transcript_name=CHM13_chrY_T0002050;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002050:0;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62155215	62159420	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=CHM13_chrY_T0002050;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002050;transcript_name=CHM13_chrY_T0002050;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002050:0;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62159421	62159556	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=CHM13_chrY_T0002050;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002050;transcript_name=CHM13_chrY_T0002050;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002050:1;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62159557	62161587	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=CHM13_chrY_T0002050;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002050;transcript_name=CHM13_chrY_T0002050;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002050:1;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62161588	62161927	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=CHM13_chrY_T0002050;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002050;transcript_name=CHM13_chrY_T0002050;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002050:2;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62161928	62189622	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=CHM13_chrY_T0002050;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002050;transcript_name=CHM13_chrY_T0002050;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002050:2;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62189623	62189746	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=CHM13_chrY_T0002050;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002050;transcript_name=CHM13_chrY_T0002050;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002050:3;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62155121	62189692	1000	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=CHM13_chrY_T0002051;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_G0000799;transcript_name=CHM13_chrY_T0002051;gene_name=ENSG00000310550;ID=CHM13_chrY_T0002051;Name=ENSG00000310550
CHM13_chrY	CAT	exon	62155121	62155214	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=CHM13_chrY_T0002051;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002051;transcript_name=CHM13_chrY_T0002051;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002051:0;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62155215	62159420	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=CHM13_chrY_T0002051;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002051;transcript_name=CHM13_chrY_T0002051;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002051:0;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62159421	62159556	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=CHM13_chrY_T0002051;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002051;transcript_name=CHM13_chrY_T0002051;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002051:1;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62159557	62161750	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=CHM13_chrY_T0002051;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002051;transcript_name=CHM13_chrY_T0002051;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002051:1;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62161751	62161927	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=CHM13_chrY_T0002051;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002051;transcript_name=CHM13_chrY_T0002051;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002051:2;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62161928	62189622	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=CHM13_chrY_T0002051;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002051;transcript_name=CHM13_chrY_T0002051;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002051:2;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62189623	62189692	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=CHM13_chrY_T0002051;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002051;transcript_name=CHM13_chrY_T0002051;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002051:3;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62188766	62189838	1000	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=CHM13_chrY_T0002052;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_G0000799;transcript_name=CHM13_chrY_T0002052;gene_name=ENSG00000310550;ID=CHM13_chrY_T0002052;Name=ENSG00000310550
CHM13_chrY	CAT	exon	62188766	62188978	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=CHM13_chrY_T0002052;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002052;transcript_name=CHM13_chrY_T0002052;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002052:0;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62188979	62189293	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=CHM13_chrY_T0002052;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002052;transcript_name=CHM13_chrY_T0002052;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002052:0;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62189294	62189383	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=CHM13_chrY_T0002052;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002052;transcript_name=CHM13_chrY_T0002052;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002052:1;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62189384	62189622	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=CHM13_chrY_T0002052;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002052;transcript_name=CHM13_chrY_T0002052;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002052:1;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62189623	62189838	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=CHM13_chrY_T0002052;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002052;transcript_name=CHM13_chrY_T0002052;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002052:2;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62188776	62189723	1000	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=CHM13_chrY_T0002053;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_G0000799;transcript_name=CHM13_chrY_T0002053;gene_name=ENSG00000310550;ID=CHM13_chrY_T0002053;Name=ENSG00000310550
CHM13_chrY	CAT	exon	62188776	62188978	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=CHM13_chrY_T0002053;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002053;transcript_name=CHM13_chrY_T0002053;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002053:0;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62188979	62189293	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=CHM13_chrY_T0002053;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002053;transcript_name=CHM13_chrY_T0002053;gene_name=ENSG00000310550;ID=intron:CHM13_chrY_T0002053:0;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62189294	62189723	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=CHM13_chrY_T0002053;gene_id=CHM13_chrY_G0000799;Parent=CHM13_chrY_T0002053;transcript_name=CHM13_chrY_T0002053;gene_name=ENSG00000310550;ID=exon:CHM13_chrY_T0002053:1;Name=ENSG00000310550;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62226911	62227789	.	-	.	source_gene_common_name=TRPC6P1;source_gene=ENSG00000292368.1;gene_id=CHM13_chrY_G0000800;gene_biotype=processed_pseudogene;gene_name=TRPC6P1;gene_sources=liftoff;ID=CHM13_chrY_G0000800;Name=TRPC6P1
CHM13_chrY	CAT	transcript	62226911	62227789	1000	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;transcript_id=CHM13_chrY_T0002054;gene_id=CHM13_chrY_G0000800;Parent=CHM13_chrY_G0000800;transcript_name=CHM13_chrY_T0002054;gene_name=TRPC6P1;ID=CHM13_chrY_T0002054;Name=TRPC6P1
CHM13_chrY	CAT	exon	62226911	62227789	.	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;transcript_id=CHM13_chrY_T0002054;gene_id=CHM13_chrY_G0000800;Parent=CHM13_chrY_T0002054;transcript_name=CHM13_chrY_T0002054;gene_name=TRPC6P1;ID=exon:CHM13_chrY_T0002054:0;Name=TRPC6P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62253532	62254523	.	-	.	source_gene_common_name=AMD1P2;source_gene=ENSG00000292364.1;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;gene_id=CHM13_chrY_G0000801;gene_biotype=processed_pseudogene;gene_name=AMD1P2;gene_sources=liftoff;ID=CHM13_chrY_G0000801;Name=AMD1P2
CHM13_chrY	CAT	transcript	62253532	62254523	1000	-	.	source_transcript=ENST00000711258.1;source_transcript_name=AMD1P2-202;source_gene=ENSG00000292364.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292364.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711258.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711258.1;transcript_score=199.899;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMD1P2;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;transcript_id=CHM13_chrY_T0002055;gene_id=CHM13_chrY_G0000801;Parent=CHM13_chrY_G0000801;transcript_name=CHM13_chrY_T0002055;gene_name=AMD1P2;ID=CHM13_chrY_T0002055;Name=AMD1P2
CHM13_chrY	CAT	exon	62253532	62254523	.	-	.	source_transcript=ENST00000711258.1;source_transcript_name=AMD1P2-202;source_gene=ENSG00000292364.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292364.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711258.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711258.1;transcript_score=199.899;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMD1P2;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;transcript_id=CHM13_chrY_T0002055;gene_id=CHM13_chrY_G0000801;Parent=CHM13_chrY_T0002055;transcript_name=CHM13_chrY_T0002055;gene_name=AMD1P2;ID=exon:CHM13_chrY_T0002055:0;Name=AMD1P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62300583	62300832	.	+	.	source_gene_common_name=DPH3P2;source_gene=ENSG00000292365.1;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;gene_id=CHM13_chrY_G0000802;gene_biotype=processed_pseudogene;gene_name=DPH3P2;gene_sources=liftoff;ID=CHM13_chrY_G0000802;Name=DPH3P2
CHM13_chrY	CAT	transcript	62300583	62300832	1000	+	.	source_transcript=ENST00000711259.1;source_transcript_name=DPH3P2-202;source_gene=ENSG00000292365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711259.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711259.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPH3P2;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;transcript_id=CHM13_chrY_T0002056;gene_id=CHM13_chrY_G0000802;Parent=CHM13_chrY_G0000802;transcript_name=CHM13_chrY_T0002056;gene_name=DPH3P2;ID=CHM13_chrY_T0002056;Name=DPH3P2
CHM13_chrY	CAT	exon	62300583	62300832	.	+	.	source_transcript=ENST00000711259.1;source_transcript_name=DPH3P2-202;source_gene=ENSG00000292365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711259.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711259.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPH3P2;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;transcript_id=CHM13_chrY_T0002056;gene_id=CHM13_chrY_G0000802;Parent=CHM13_chrY_T0002056;transcript_name=CHM13_chrY_T0002056;gene_name=DPH3P2;ID=exon:CHM13_chrY_T0002056:0;Name=DPH3P2;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62306325	62368760	.	+	.	source_gene_common_name=VAMP7;source_gene=ENSG00000292366.1;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;gene_id=CHM13_chrY_G0000803;gene_biotype=protein_coding;gene_name=VAMP7;gene_sources=liftoff;ID=CHM13_chrY_G0000803;Name=VAMP7
CHM13_chrY	CAT	transcript	62306325	62368760	100	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_G0000803;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=CHM13_chrY_T0002057;Name=VAMP7
CHM13_chrY	CAT	exon	62306325	62306428	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002057:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62306429	62314438	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002057:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62314439	62314593	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002057:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62314448	62314593	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002057:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	62314448	62314450	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=start_codon:CHM13_chrY_T0002057;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62314594	62320606	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002057:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62320607	62320664	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002057:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62320607	62320664	.	+	1	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002057:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62320665	62323095	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002057:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62323096	62323233	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002057:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62323096	62323233	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002057:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62323234	62325483	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002057:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62325484	62325574	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002057:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62325484	62325574	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002057:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62325575	62344807	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002057:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62344808	62344875	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002057:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62344808	62344875	.	+	2	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002057:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62344876	62364692	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002057:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62364693	62364785	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002057:6;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62364693	62364785	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002057:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62364786	62366873	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002057:6;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62366874	62368760	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002057:7;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62366874	62366942	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002057:6;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	62366940	62366942	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=CHM13_chrY_T0002057;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002057;transcript_name=CHM13_chrY_T0002057;gene_name=VAMP7;ID=stop_codon:CHM13_chrY_T0002057;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62306338	62366900	1000	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_G0000803;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=CHM13_chrY_T0002058;Name=VAMP7
CHM13_chrY	CAT	exon	62306338	62306428	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002058:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62306429	62314438	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002058:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62314439	62314614	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002058:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62314615	62320606	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002058:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62320607	62320664	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002058:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62320665	62323095	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002058:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62323096	62323233	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002058:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62323234	62325483	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002058:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62325484	62325574	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002058:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62325575	62344807	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002058:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62344808	62344875	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002058:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62344876	62364692	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002058:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62364693	62364785	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002058:6;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62364786	62366873	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002058:6;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62366874	62366900	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=299.865;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=CHM13_chrY_T0002058;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002058;transcript_name=CHM13_chrY_T0002058;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002058:7;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62306340	62366935	1000	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_G0000803;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=CHM13_chrY_T0002059;Name=VAMP7
CHM13_chrY	CAT	exon	62306340	62306428	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002059:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62306429	62314438	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002059:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62314439	62314593	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002059:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62314448	62314593	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002059:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	62314448	62314450	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=start_codon:CHM13_chrY_T0002059;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62314594	62323095	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002059:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62323096	62323233	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002059:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62323096	62323129	.	+	1	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002059:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	62323127	62323129	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=stop_codon:CHM13_chrY_T0002059;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62323234	62325483	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002059:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62325484	62325574	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002059:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62325575	62344807	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002059:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62344808	62344875	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002059:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62344876	62364692	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002059:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62364693	62364785	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002059:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62364786	62366873	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002059:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62366874	62366935	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=CHM13_chrY_T0002059;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002059;transcript_name=CHM13_chrY_T0002059;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002059:6;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62306352	62364782	1000	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_G0000803;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=CHM13_chrY_T0002060;Name=VAMP7
CHM13_chrY	CAT	exon	62306352	62306428	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002060;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002060:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62306429	62314438	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002060;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002060:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62314439	62314589	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002060;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002060:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62314590	62320606	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002060;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002060:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62320607	62320664	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002060;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002060:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62320665	62323095	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002060;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002060:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62323096	62323233	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002060;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002060:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62323234	62325483	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002060;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002060:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62325484	62325574	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002060;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002060:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62325575	62344807	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002060;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002060:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62344808	62344875	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002060;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002060:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62344876	62364692	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002060;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002060:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62364693	62364782	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=CHM13_chrY_T0002060;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002060;transcript_name=CHM13_chrY_T0002060;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002060:6;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62306355	62368760	100	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_G0000803;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=CHM13_chrY_T0002061;Name=VAMP7
CHM13_chrY	CAT	exon	62306355	62306428	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002061:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62306429	62314438	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002061:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62314439	62314593	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002061:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62314448	62314593	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002061:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	62314448	62314450	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=start_codon:CHM13_chrY_T0002061;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62314594	62320606	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002061:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62320607	62320664	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002061:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62320607	62320664	.	+	1	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002061:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62320665	62323095	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002061:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62323096	62323233	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002061:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62323096	62323233	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002061:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62323234	62325483	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002061:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62325484	62325574	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002061:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62325484	62325574	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002061:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62325575	62364692	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002061:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62364693	62364785	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002061:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62364693	62364785	.	+	2	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002061:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62364786	62366873	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002061:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62366874	62368760	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002061:6;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62366874	62367130	.	+	2	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002061:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	62367128	62367130	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=CHM13_chrY_T0002061;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002061;transcript_name=CHM13_chrY_T0002061;gene_name=VAMP7;ID=stop_codon:CHM13_chrY_T0002061;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62306358	62366980	100	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_G0000803;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=CHM13_chrY_T0002062;Name=VAMP7
CHM13_chrY	CAT	exon	62306358	62306428	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002062:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62306429	62314438	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002062:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62314439	62314528	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002062:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62314448	62314528	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002062:0;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	62314448	62314450	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=start_codon:CHM13_chrY_T0002062;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62314529	62323095	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002062:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62323096	62323233	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002062:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62323096	62323233	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002062:1;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62323234	62325483	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002062:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62325484	62325574	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002062:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62325484	62325574	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002062:2;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62325575	62344807	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002062:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62344808	62344875	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002062:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62344808	62344875	.	+	2	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002062:3;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62344876	62364692	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002062:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62364693	62364785	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002062:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62364693	62364785	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002062:4;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62364786	62366873	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=intron:CHM13_chrY_T0002062:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62366874	62366980	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=exon:CHM13_chrY_T0002062:6;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62366874	62366942	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=CDS:CHM13_chrY_T0002062:5;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	62366940	62366942	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=CHM13_chrY_T0002062;gene_id=CHM13_chrY_G0000803;Parent=CHM13_chrY_T0002062;transcript_name=CHM13_chrY_T0002062;gene_name=VAMP7;ID=stop_codon:CHM13_chrY_T0002062;Name=VAMP7;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62377109	62384316	.	-	.	source_gene_common_name=ENSG00000310555;source_gene=ENSG00000310555.1;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;gene_id=CHM13_chrY_G0000804;gene_biotype=lncRNA;gene_name=ENSG00000310555;gene_sources=liftoff;ID=CHM13_chrY_G0000804;Name=ENSG00000310555
CHM13_chrY	CAT	transcript	62377109	62384316	1000	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=299.119;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=CHM13_chrY_T0002063;gene_id=CHM13_chrY_G0000804;Parent=CHM13_chrY_G0000804;transcript_name=CHM13_chrY_T0002063;gene_name=ENSG00000310555;ID=CHM13_chrY_T0002063;Name=ENSG00000310555
CHM13_chrY	CAT	exon	62377109	62377391	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=299.119;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=CHM13_chrY_T0002063;gene_id=CHM13_chrY_G0000804;Parent=CHM13_chrY_T0002063;transcript_name=CHM13_chrY_T0002063;gene_name=ENSG00000310555;ID=exon:CHM13_chrY_T0002063:0;Name=ENSG00000310555;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62377392	62384145	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=299.119;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=CHM13_chrY_T0002063;gene_id=CHM13_chrY_G0000804;Parent=CHM13_chrY_T0002063;transcript_name=CHM13_chrY_T0002063;gene_name=ENSG00000310555;ID=intron:CHM13_chrY_T0002063:0;Name=ENSG00000310555;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62384146	62384316	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=299.119;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=CHM13_chrY_T0002063;gene_id=CHM13_chrY_G0000804;Parent=CHM13_chrY_T0002063;transcript_name=CHM13_chrY_T0002063;gene_name=ENSG00000310555;ID=exon:CHM13_chrY_T0002063:1;Name=ENSG00000310555;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62403984	62404317	.	-	.	source_gene_common_name=ELOCP24;source_gene=ENSG00000292367.1;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;gene_id=CHM13_chrY_G0000805;gene_biotype=processed_pseudogene;gene_name=ELOCP24;gene_sources=liftoff;ID=CHM13_chrY_G0000805;Name=ELOCP24
CHM13_chrY	CAT	transcript	62403984	62404317	1000	-	.	source_transcript=ENST00000711266.1;source_transcript_name=ELOCP24-202;source_gene=ENSG00000292367.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292367.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711266.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711266.1;transcript_score=199.701;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP24;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;transcript_id=CHM13_chrY_T0002064;gene_id=CHM13_chrY_G0000805;Parent=CHM13_chrY_G0000805;transcript_name=CHM13_chrY_T0002064;gene_name=ELOCP24;ID=CHM13_chrY_T0002064;Name=ELOCP24
CHM13_chrY	CAT	exon	62403984	62404317	.	-	.	source_transcript=ENST00000711266.1;source_transcript_name=ELOCP24-202;source_gene=ENSG00000292367.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292367.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711266.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711266.1;transcript_score=199.701;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP24;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;transcript_id=CHM13_chrY_T0002064;gene_id=CHM13_chrY_G0000805;Parent=CHM13_chrY_T0002064;transcript_name=CHM13_chrY_T0002064;gene_name=ELOCP24;ID=exon:CHM13_chrY_T0002064:0;Name=ELOCP24;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62410362	62411240	.	-	.	source_gene_common_name=TRPC6P1;source_gene=ENSG00000292368.1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;gene_id=CHM13_chrY_G0000806;gene_biotype=processed_pseudogene;gene_name=TRPC6P1;gene_sources=liftoff;ID=CHM13_chrY_G0000806;Name=TRPC6P1
CHM13_chrY	CAT	transcript	62410362	62411240	1000	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=199.772;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;transcript_id=CHM13_chrY_T0002065;gene_id=CHM13_chrY_G0000806;Parent=CHM13_chrY_G0000806;transcript_name=CHM13_chrY_T0002065;gene_name=TRPC6P1;ID=CHM13_chrY_T0002065;Name=TRPC6P1
CHM13_chrY	CAT	exon	62410362	62411240	.	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=199.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;transcript_id=CHM13_chrY_T0002065;gene_id=CHM13_chrY_G0000806;Parent=CHM13_chrY_T0002065;transcript_name=CHM13_chrY_T0002065;gene_name=TRPC6P1;ID=exon:CHM13_chrY_T0002065:0;Name=TRPC6P1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62422687	62438005	.	+	.	source_gene_common_name=IL9R;source_gene=ENSG00000292373.2;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;gene_id=CHM13_chrY_G0000807;gene_biotype=protein_coding;gene_name=IL9R;gene_sources=liftoff;ID=CHM13_chrY_G0000807;Name=IL9R
CHM13_chrY	CAT	transcript	62422687	62435805	100	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_G0000807;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=CHM13_chrY_T0002066;Name=IL9R
CHM13_chrY	CAT	exon	62422687	62422778	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=exon:CHM13_chrY_T0002066:0;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62422751	62422778	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002066:0;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	62422751	62422753	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=start_codon:CHM13_chrY_T0002066;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62422779	62427900	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=intron:CHM13_chrY_T0002066:0;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62427901	62428014	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=exon:CHM13_chrY_T0002066:1;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62427901	62428014	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002066:1;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62428015	62428443	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=intron:CHM13_chrY_T0002066:1;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62428444	62428555	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=exon:CHM13_chrY_T0002066:2;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62428444	62428555	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002066:2;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62428556	62428671	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=intron:CHM13_chrY_T0002066:2;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62428672	62428850	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=exon:CHM13_chrY_T0002066:3;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62428672	62428850	.	+	1	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002066:3;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62428851	62429414	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=intron:CHM13_chrY_T0002066:3;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62429415	62429560	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=exon:CHM13_chrY_T0002066:4;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62429415	62429560	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002066:4;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62429561	62430272	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=intron:CHM13_chrY_T0002066:4;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62430273	62430474	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=exon:CHM13_chrY_T0002066:5;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62430273	62430474	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002066:5;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62430475	62431077	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=intron:CHM13_chrY_T0002066:5;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62431078	62431183	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=exon:CHM13_chrY_T0002066:6;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62431078	62431183	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002066:6;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62431184	62432518	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=intron:CHM13_chrY_T0002066:6;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62432519	62432603	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=exon:CHM13_chrY_T0002066:7;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62432519	62432603	.	+	1	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002066:7;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62432604	62434803	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=intron:CHM13_chrY_T0002066:7;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62434804	62435805	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=exon:CHM13_chrY_T0002066:8;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62434804	62435397	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002066:8;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	62435395	62435397	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=CHM13_chrY_T0002066;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002066;transcript_name=CHM13_chrY_T0002066;gene_name=IL9R;ID=stop_codon:CHM13_chrY_T0002066;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62422697	62438005	100	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_G0000807;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=CHM13_chrY_T0002067;Name=IL9R
CHM13_chrY	CAT	exon	62422697	62422778	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=exon:CHM13_chrY_T0002067:0;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62422735	62422778	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002067:0;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	62422735	62422737	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=start_codon:CHM13_chrY_T0002067;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62422779	62426398	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=intron:CHM13_chrY_T0002067:0;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62426399	62426499	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=exon:CHM13_chrY_T0002067:1;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62426399	62426499	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002067:1;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62426500	62427876	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=intron:CHM13_chrY_T0002067:1;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62427877	62428014	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=exon:CHM13_chrY_T0002067:2;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62427877	62428014	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002067:2;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62428015	62428443	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=intron:CHM13_chrY_T0002067:2;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62428444	62428555	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=exon:CHM13_chrY_T0002067:3;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62428444	62428555	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002067:3;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62428556	62428678	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=intron:CHM13_chrY_T0002067:3;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62428679	62428850	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=exon:CHM13_chrY_T0002067:4;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62428679	62428850	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002067:4;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62428851	62429443	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=intron:CHM13_chrY_T0002067:4;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62429444	62429560	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=exon:CHM13_chrY_T0002067:5;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62429444	62429560	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002067:5;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62429561	62430272	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=intron:CHM13_chrY_T0002067:5;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62430273	62430474	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=exon:CHM13_chrY_T0002067:6;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62430273	62430474	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002067:6;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62430475	62431077	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=intron:CHM13_chrY_T0002067:6;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62431078	62431183	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=exon:CHM13_chrY_T0002067:7;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62431078	62431183	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002067:7;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62431184	62434803	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=intron:CHM13_chrY_T0002067:7;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62434804	62438005	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=exon:CHM13_chrY_T0002067:8;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62434804	62434840	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=CDS:CHM13_chrY_T0002067:8;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	62434838	62434840	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=CHM13_chrY_T0002067;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002067;transcript_name=CHM13_chrY_T0002067;gene_name=IL9R;ID=stop_codon:CHM13_chrY_T0002067;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62422725	62427965	1000	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=CHM13_chrY_T0002068;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_G0000807;transcript_name=CHM13_chrY_T0002068;gene_name=IL9R;ID=CHM13_chrY_T0002068;Name=IL9R
CHM13_chrY	CAT	exon	62422725	62422778	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=CHM13_chrY_T0002068;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002068;transcript_name=CHM13_chrY_T0002068;gene_name=IL9R;ID=exon:CHM13_chrY_T0002068:0;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62422779	62426320	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=CHM13_chrY_T0002068;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002068;transcript_name=CHM13_chrY_T0002068;gene_name=IL9R;ID=intron:CHM13_chrY_T0002068:0;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62426321	62426499	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=CHM13_chrY_T0002068;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002068;transcript_name=CHM13_chrY_T0002068;gene_name=IL9R;ID=exon:CHM13_chrY_T0002068:1;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62426500	62427900	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=CHM13_chrY_T0002068;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002068;transcript_name=CHM13_chrY_T0002068;gene_name=IL9R;ID=intron:CHM13_chrY_T0002068:1;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62427901	62427965	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=CHM13_chrY_T0002068;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002068;transcript_name=CHM13_chrY_T0002068;gene_name=IL9R;ID=exon:CHM13_chrY_T0002068:2;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62431109	62433041	1000	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=CHM13_chrY_T0002070;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_G0000807;transcript_name=CHM13_chrY_T0002070;gene_name=IL9R;ID=CHM13_chrY_T0002070;Name=IL9R
CHM13_chrY	CAT	exon	62431109	62431183	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=CHM13_chrY_T0002070;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002070;transcript_name=CHM13_chrY_T0002070;gene_name=IL9R;ID=exon:CHM13_chrY_T0002070:0;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62431184	62432518	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=CHM13_chrY_T0002070;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002070;transcript_name=CHM13_chrY_T0002070;gene_name=IL9R;ID=intron:CHM13_chrY_T0002070:0;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62432519	62432603	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=CHM13_chrY_T0002070;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002070;transcript_name=CHM13_chrY_T0002070;gene_name=IL9R;ID=exon:CHM13_chrY_T0002070:1;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62432604	62432893	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=CHM13_chrY_T0002070;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002070;transcript_name=CHM13_chrY_T0002070;gene_name=IL9R;ID=intron:CHM13_chrY_T0002070:1;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62432894	62433041	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=CHM13_chrY_T0002070;gene_id=CHM13_chrY_G0000807;Parent=CHM13_chrY_T0002070;transcript_name=CHM13_chrY_T0002070;gene_name=IL9R;ID=exon:CHM13_chrY_T0002070:2;Name=IL9R;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62429213	62432603	.	+	.	source_gene_common_name=ENSG00000292369;source_gene=ENSG00000292369.1;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;gene_id=CHM13_chrY_G0000808;gene_biotype=lncRNA;gene_name=ENSG00000292369;gene_sources=liftoff;ID=CHM13_chrY_G0000808;Name=ENSG00000292369
CHM13_chrY	CAT	transcript	62429213	62432603	1000	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=CHM13_chrY_T0002069;gene_id=CHM13_chrY_G0000808;Parent=CHM13_chrY_G0000808;transcript_name=CHM13_chrY_T0002069;gene_name=ENSG00000292369;ID=CHM13_chrY_T0002069;Name=ENSG00000292369
CHM13_chrY	CAT	exon	62429213	62429560	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=CHM13_chrY_T0002069;gene_id=CHM13_chrY_G0000808;Parent=CHM13_chrY_T0002069;transcript_name=CHM13_chrY_T0002069;gene_name=ENSG00000292369;ID=exon:CHM13_chrY_T0002069:0;Name=ENSG00000292369;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62429561	62432518	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=CHM13_chrY_T0002069;gene_id=CHM13_chrY_G0000808;Parent=CHM13_chrY_T0002069;transcript_name=CHM13_chrY_T0002069;gene_name=ENSG00000292369;ID=intron:CHM13_chrY_T0002069:0;Name=ENSG00000292369;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62432519	62432603	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=256.01599999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=CHM13_chrY_T0002069;gene_id=CHM13_chrY_G0000808;Parent=CHM13_chrY_T0002069;transcript_name=CHM13_chrY_T0002069;gene_name=ENSG00000292369;ID=exon:CHM13_chrY_T0002069:1;Name=ENSG00000292369;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62439604	62441877	.	-	.	source_gene_common_name=WASIR1;source_gene=ENSG00000292370.2;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;gene_id=CHM13_chrY_G0000809;gene_biotype=lncRNA;gene_name=WASIR1;gene_sources=liftoff;ID=CHM13_chrY_G0000809;Name=WASIR1
CHM13_chrY	CAT	transcript	62439604	62441870	1000	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=CHM13_chrY_T0002071;gene_id=CHM13_chrY_G0000809;Parent=CHM13_chrY_G0000809;transcript_name=CHM13_chrY_T0002071;gene_name=WASIR1;ID=CHM13_chrY_T0002071;Name=WASIR1
CHM13_chrY	CAT	exon	62439604	62440614	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=CHM13_chrY_T0002071;gene_id=CHM13_chrY_G0000809;Parent=CHM13_chrY_T0002071;transcript_name=CHM13_chrY_T0002071;gene_name=WASIR1;ID=exon:CHM13_chrY_T0002071:0;Name=WASIR1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62440615	62441653	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=CHM13_chrY_T0002071;gene_id=CHM13_chrY_G0000809;Parent=CHM13_chrY_T0002071;transcript_name=CHM13_chrY_T0002071;gene_name=WASIR1;ID=intron:CHM13_chrY_T0002071:0;Name=WASIR1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62441654	62441870	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=CHM13_chrY_T0002071;gene_id=CHM13_chrY_G0000809;Parent=CHM13_chrY_T0002071;transcript_name=CHM13_chrY_T0002071;gene_name=WASIR1;ID=exon:CHM13_chrY_T0002071:1;Name=WASIR1;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62439604	62441877	1000	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=CHM13_chrY_T0002072;gene_id=CHM13_chrY_G0000809;Parent=CHM13_chrY_G0000809;transcript_name=CHM13_chrY_T0002072;gene_name=WASIR1;ID=CHM13_chrY_T0002072;Name=WASIR1
CHM13_chrY	CAT	exon	62439604	62440489	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=CHM13_chrY_T0002072;gene_id=CHM13_chrY_G0000809;Parent=CHM13_chrY_T0002072;transcript_name=CHM13_chrY_T0002072;gene_name=WASIR1;ID=exon:CHM13_chrY_T0002072:0;Name=WASIR1;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62440490	62441653	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=CHM13_chrY_T0002072;gene_id=CHM13_chrY_G0000809;Parent=CHM13_chrY_T0002072;transcript_name=CHM13_chrY_T0002072;gene_name=WASIR1;ID=intron:CHM13_chrY_T0002072:0;Name=WASIR1;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62441654	62441877	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.73;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=CHM13_chrY_T0002072;gene_id=CHM13_chrY_G0000809;Parent=CHM13_chrY_T0002072;transcript_name=CHM13_chrY_T0002072;gene_name=WASIR1;ID=exon:CHM13_chrY_T0002072:1;Name=WASIR1;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62445802	62449436	.	+	.	source_gene_common_name=WASH6P;source_gene=ENSG00000292372.1;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;gene_id=CHM13_chrY_G0000810;gene_biotype=protein_coding;gene_name=WASH6P;gene_sources=liftoff;ID=CHM13_chrY_G0000810;Name=WASH6P
CHM13_chrY	CAT	transcript	62445802	62446540	1000	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.392;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=CHM13_chrY_T0002073;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002073;gene_name=WASH6P;ID=CHM13_chrY_T0002073;Name=WASH6P
CHM13_chrY	CAT	exon	62445802	62446124	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.392;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=CHM13_chrY_T0002073;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002073;transcript_name=CHM13_chrY_T0002073;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002073:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446125	62446482	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.392;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=CHM13_chrY_T0002073;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002073;transcript_name=CHM13_chrY_T0002073;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002073:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62446483	62446540	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=252.392;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=CHM13_chrY_T0002073;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002073;transcript_name=CHM13_chrY_T0002073;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002073:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62445937	62449100	100	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=CHM13_chrY_T0002074;Name=WASH6P
CHM13_chrY	CAT	exon	62445937	62446124	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002074:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62445937	62446124	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=CDS:CHM13_chrY_T0002074:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	start_codon	62445937	62445939	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=start_codon:CHM13_chrY_T0002074;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446125	62446555	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002074:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62446556	62446560	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002074:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62446556	62446560	.	+	1	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=CDS:CHM13_chrY_T0002074:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446561	62446737	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002074:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62446738	62446939	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002074:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62446738	62446939	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=CDS:CHM13_chrY_T0002074:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446940	62447027	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002074:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62447028	62447186	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002074:3;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62447028	62447186	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=CDS:CHM13_chrY_T0002074:3;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62447187	62447845	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002074:3;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62447846	62447998	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002074:4;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62447846	62447998	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=CDS:CHM13_chrY_T0002074:4;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62447999	62448757	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002074:4;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62448758	62448826	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002074:5;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62448758	62448826	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=CDS:CHM13_chrY_T0002074:5;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62448827	62448966	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002074:5;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62448967	62449100	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002074:6;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	CDS	62448967	62449100	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=CDS:CHM13_chrY_T0002074:6;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	stop_codon	62449098	62449100	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002074;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002074;transcript_name=CHM13_chrY_T0002074;gene_name=WASH6P;ID=stop_codon:CHM13_chrY_T0002074;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62446304	62449389	1000	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.763;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=CHM13_chrY_T0002075;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002075;gene_name=WASH6P;ID=CHM13_chrY_T0002075;Name=WASH6P
CHM13_chrY	CAT	exon	62446304	62446935	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.763;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=CHM13_chrY_T0002075;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002075;transcript_name=CHM13_chrY_T0002075;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002075:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446936	62447027	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.763;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=CHM13_chrY_T0002075;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002075;transcript_name=CHM13_chrY_T0002075;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002075:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62447028	62449389	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=240.763;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=CHM13_chrY_T0002075;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002075;transcript_name=CHM13_chrY_T0002075;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002075:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62446422	62446933	1000	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002076;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002076;gene_name=WASH6P;ID=CHM13_chrY_T0002076;Name=WASH6P
CHM13_chrY	CAT	exon	62446422	62446555	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002076;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002076;transcript_name=CHM13_chrY_T0002076;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002076:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446556	62446737	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002076;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002076;transcript_name=CHM13_chrY_T0002076;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002076:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62446738	62446933	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002076;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002076;transcript_name=CHM13_chrY_T0002076;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002076:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62446556	62449392	1000	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=CHM13_chrY_T0002077;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002077;gene_name=WASH6P;ID=CHM13_chrY_T0002077;Name=WASH6P
CHM13_chrY	CAT	exon	62446556	62446560	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=CHM13_chrY_T0002077;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002077;transcript_name=CHM13_chrY_T0002077;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002077:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446561	62446737	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=CHM13_chrY_T0002077;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002077;transcript_name=CHM13_chrY_T0002077;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002077:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62446738	62446935	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=CHM13_chrY_T0002077;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002077;transcript_name=CHM13_chrY_T0002077;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002077:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446936	62447027	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=CHM13_chrY_T0002077;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002077;transcript_name=CHM13_chrY_T0002077;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002077:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62447028	62447186	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=CHM13_chrY_T0002077;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002077;transcript_name=CHM13_chrY_T0002077;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002077:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62447187	62447845	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=CHM13_chrY_T0002077;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002077;transcript_name=CHM13_chrY_T0002077;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002077:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62447846	62447998	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=CHM13_chrY_T0002077;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002077;transcript_name=CHM13_chrY_T0002077;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002077:3;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62447999	62448757	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=CHM13_chrY_T0002077;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002077;transcript_name=CHM13_chrY_T0002077;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002077:3;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62448758	62448826	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=CHM13_chrY_T0002077;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002077;transcript_name=CHM13_chrY_T0002077;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002077:4;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62448827	62448966	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=CHM13_chrY_T0002077;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002077;transcript_name=CHM13_chrY_T0002077;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002077:4;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62448967	62449392	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=256.5;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=CHM13_chrY_T0002077;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002077;transcript_name=CHM13_chrY_T0002077;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002077:5;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62446556	62449392	1000	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=CHM13_chrY_T0002078;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002078;gene_name=WASH6P;ID=CHM13_chrY_T0002078;Name=WASH6P
CHM13_chrY	CAT	exon	62446556	62446560	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=CHM13_chrY_T0002078;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002078;transcript_name=CHM13_chrY_T0002078;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002078:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446561	62446737	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=CHM13_chrY_T0002078;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002078;transcript_name=CHM13_chrY_T0002078;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002078:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62446738	62446935	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=CHM13_chrY_T0002078;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002078;transcript_name=CHM13_chrY_T0002078;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002078:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446936	62447027	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=CHM13_chrY_T0002078;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002078;transcript_name=CHM13_chrY_T0002078;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002078:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62447028	62448826	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=CHM13_chrY_T0002078;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002078;transcript_name=CHM13_chrY_T0002078;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002078:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62448827	62448966	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=CHM13_chrY_T0002078;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002078;transcript_name=CHM13_chrY_T0002078;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002078:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62448967	62449392	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=275.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=CHM13_chrY_T0002078;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002078;transcript_name=CHM13_chrY_T0002078;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002078:3;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62446556	62449436	1000	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=CHM13_chrY_T0002079;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002079;gene_name=WASH6P;ID=CHM13_chrY_T0002079;Name=WASH6P
CHM13_chrY	CAT	exon	62446556	62446560	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=CHM13_chrY_T0002079;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002079;transcript_name=CHM13_chrY_T0002079;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002079:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446561	62446737	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=CHM13_chrY_T0002079;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002079;transcript_name=CHM13_chrY_T0002079;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002079:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62446738	62446939	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=CHM13_chrY_T0002079;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002079;transcript_name=CHM13_chrY_T0002079;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002079:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446940	62447027	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=CHM13_chrY_T0002079;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002079;transcript_name=CHM13_chrY_T0002079;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002079:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62447028	62447186	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=CHM13_chrY_T0002079;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002079;transcript_name=CHM13_chrY_T0002079;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002079:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62447187	62447845	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=CHM13_chrY_T0002079;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002079;transcript_name=CHM13_chrY_T0002079;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002079:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62447846	62447998	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=CHM13_chrY_T0002079;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002079;transcript_name=CHM13_chrY_T0002079;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002079:3;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62447999	62448757	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=CHM13_chrY_T0002079;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002079;transcript_name=CHM13_chrY_T0002079;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002079:3;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62448758	62448826	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=CHM13_chrY_T0002079;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002079;transcript_name=CHM13_chrY_T0002079;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002079:4;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62448827	62448966	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=CHM13_chrY_T0002079;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002079;transcript_name=CHM13_chrY_T0002079;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002079:4;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62448967	62449436	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=257.374;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=CHM13_chrY_T0002079;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002079;transcript_name=CHM13_chrY_T0002079;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002079:5;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62446556	62449389	1000	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=CHM13_chrY_T0002080;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002080;gene_name=WASH6P;ID=CHM13_chrY_T0002080;Name=WASH6P
CHM13_chrY	CAT	exon	62446556	62446560	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=CHM13_chrY_T0002080;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002080;transcript_name=CHM13_chrY_T0002080;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002080:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446561	62446737	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=CHM13_chrY_T0002080;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002080;transcript_name=CHM13_chrY_T0002080;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002080:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62446738	62446935	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=CHM13_chrY_T0002080;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002080;transcript_name=CHM13_chrY_T0002080;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002080:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446936	62447027	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=CHM13_chrY_T0002080;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002080;transcript_name=CHM13_chrY_T0002080;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002080:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62447028	62449389	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=285.645;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=CHM13_chrY_T0002080;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002080;transcript_name=CHM13_chrY_T0002080;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002080:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62446556	62447257	1000	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.499;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=CHM13_chrY_T0002081;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002081;gene_name=WASH6P;ID=CHM13_chrY_T0002081;Name=WASH6P
CHM13_chrY	CAT	exon	62446556	62446939	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.499;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=CHM13_chrY_T0002081;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002081;transcript_name=CHM13_chrY_T0002081;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002081:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446940	62447027	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.499;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=CHM13_chrY_T0002081;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002081;transcript_name=CHM13_chrY_T0002081;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002081:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62447028	62447257	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=292.499;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=CHM13_chrY_T0002081;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002081;transcript_name=CHM13_chrY_T0002081;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002081:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62446556	62447115	1000	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002082;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002082;gene_name=WASH6P;ID=CHM13_chrY_T0002082;Name=WASH6P
CHM13_chrY	CAT	exon	62446556	62446560	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002082;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002082;transcript_name=CHM13_chrY_T0002082;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002082:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446561	62446737	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002082;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002082;transcript_name=CHM13_chrY_T0002082;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002082:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62446738	62446935	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002082;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002082;transcript_name=CHM13_chrY_T0002082;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002082:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446936	62447027	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002082;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002082;transcript_name=CHM13_chrY_T0002082;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002082:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62447028	62447115	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002082;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002082;transcript_name=CHM13_chrY_T0002082;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002082:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62446556	62447061	1000	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002083;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002083;gene_name=WASH6P;ID=CHM13_chrY_T0002083;Name=WASH6P
CHM13_chrY	CAT	exon	62446556	62446560	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002083;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002083;transcript_name=CHM13_chrY_T0002083;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002083:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446561	62446737	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002083;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002083;transcript_name=CHM13_chrY_T0002083;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002083:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62446738	62446939	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002083;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002083;transcript_name=CHM13_chrY_T0002083;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002083:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62446940	62447027	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002083;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002083;transcript_name=CHM13_chrY_T0002083;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002083:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62447028	62447061	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002083;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002083;transcript_name=CHM13_chrY_T0002083;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002083:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62446738	62446818	1000	+	.	source_transcript=ENST00000711279.1;source_transcript_name=WASH6P-224;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711279.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002084;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002084;gene_name=WASH6P;ID=CHM13_chrY_T0002084;Name=WASH6P
CHM13_chrY	CAT	exon	62446738	62446818	.	+	.	source_transcript=ENST00000711279.1;source_transcript_name=WASH6P-224;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711279.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;transcript_id=CHM13_chrY_T0002084;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002084;transcript_name=CHM13_chrY_T0002084;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002084:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62447093	62449392	1000	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.634;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=CHM13_chrY_T0002085;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002085;gene_name=WASH6P;ID=CHM13_chrY_T0002085;Name=WASH6P
CHM13_chrY	CAT	exon	62447093	62447186	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.634;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=CHM13_chrY_T0002085;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002085;transcript_name=CHM13_chrY_T0002085;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002085:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62447187	62447845	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.634;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=CHM13_chrY_T0002085;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002085;transcript_name=CHM13_chrY_T0002085;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002085:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62447846	62449392	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.634;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=CHM13_chrY_T0002085;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002085;transcript_name=CHM13_chrY_T0002085;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002085:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62447550	62449280	1000	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.88;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=CHM13_chrY_T0002086;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002086;gene_name=WASH6P;ID=CHM13_chrY_T0002086;Name=WASH6P
CHM13_chrY	CAT	exon	62447550	62447998	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.88;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=CHM13_chrY_T0002086;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002086;transcript_name=CHM13_chrY_T0002086;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002086:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62447999	62448757	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.88;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=CHM13_chrY_T0002086;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002086;transcript_name=CHM13_chrY_T0002086;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002086:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62448758	62448826	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.88;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=CHM13_chrY_T0002086;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002086;transcript_name=CHM13_chrY_T0002086;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002086:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62448827	62448966	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.88;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=CHM13_chrY_T0002086;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002086;transcript_name=CHM13_chrY_T0002086;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002086:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62448967	62449280	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.88;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=CHM13_chrY_T0002086;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002086;transcript_name=CHM13_chrY_T0002086;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002086:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62447797	62449280	1000	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=299.813;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=CHM13_chrY_T0002087;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_G0000810;transcript_name=CHM13_chrY_T0002087;gene_name=WASH6P;ID=CHM13_chrY_T0002087;Name=WASH6P
CHM13_chrY	CAT	exon	62447797	62447998	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=CHM13_chrY_T0002087;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002087;transcript_name=CHM13_chrY_T0002087;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002087:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62447999	62448757	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=CHM13_chrY_T0002087;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002087;transcript_name=CHM13_chrY_T0002087;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002087:0;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62448758	62448775	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=CHM13_chrY_T0002087;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002087;transcript_name=CHM13_chrY_T0002087;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002087:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62448776	62448966	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=CHM13_chrY_T0002087;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002087;transcript_name=CHM13_chrY_T0002087;gene_name=WASH6P;ID=intron:CHM13_chrY_T0002087:1;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62448967	62449280	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=299.813;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=CHM13_chrY_T0002087;gene_id=CHM13_chrY_G0000810;Parent=CHM13_chrY_T0002087;transcript_name=CHM13_chrY_T0002087;gene_name=WASH6P;ID=exon:CHM13_chrY_T0002087:2;Name=WASH6P;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62449318	62452840	.	-	.	source_gene_common_name=ENSG00000310542;source_gene=ENSG00000310542.1;gene_id=CHM13_chrY_G0000811;gene_biotype=lncRNA;gene_name=ENSG00000310542;gene_sources=liftoff;ID=CHM13_chrY_G0000811;Name=ENSG00000310542
CHM13_chrY	CAT	transcript	62449318	62449392	1000	-	.	source_transcript=ENST00000850693.1;source_transcript_name=ENST00000850693;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850693.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850693.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002088;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_G0000811;transcript_name=CHM13_chrY_T0002088;gene_name=ENSG00000310542;ID=CHM13_chrY_T0002088;Name=ENSG00000310542
CHM13_chrY	CAT	exon	62449318	62449392	.	-	.	source_transcript=ENST00000850693.1;source_transcript_name=ENST00000850693;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850693.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850693.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002088;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002088;transcript_name=CHM13_chrY_T0002088;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002088:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62449383	62452771	1000	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002089;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_G0000811;transcript_name=CHM13_chrY_T0002089;gene_name=ENSG00000310542;ID=CHM13_chrY_T0002089;Name=ENSG00000310542
CHM13_chrY	CAT	exon	62449383	62449520	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002089;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002089;transcript_name=CHM13_chrY_T0002089;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002089:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62449521	62450107	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002089;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002089;transcript_name=CHM13_chrY_T0002089;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002089:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62450108	62450331	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002089;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002089;transcript_name=CHM13_chrY_T0002089;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002089:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62450332	62451062	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002089;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002089;transcript_name=CHM13_chrY_T0002089;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002089:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451063	62451171	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002089;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002089;transcript_name=CHM13_chrY_T0002089;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002089:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451172	62451556	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002089;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002089;transcript_name=CHM13_chrY_T0002089;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002089:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451557	62451774	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002089;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002089;transcript_name=CHM13_chrY_T0002089;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002089:3;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451775	62452572	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002089;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002089;transcript_name=CHM13_chrY_T0002089;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002089:3;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62452573	62452771	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002089;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002089;transcript_name=CHM13_chrY_T0002089;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002089:4;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62449386	62452659	1000	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002090;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_G0000811;transcript_name=CHM13_chrY_T0002090;gene_name=ENSG00000310542;ID=CHM13_chrY_T0002090;Name=ENSG00000310542
CHM13_chrY	CAT	exon	62449386	62450301	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002090;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002090;transcript_name=CHM13_chrY_T0002090;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002090:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62450302	62451086	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002090;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002090;transcript_name=CHM13_chrY_T0002090;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002090:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451087	62451189	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002090;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002090;transcript_name=CHM13_chrY_T0002090;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002090:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451190	62451556	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002090;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002090;transcript_name=CHM13_chrY_T0002090;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002090:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451557	62451774	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002090;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002090;transcript_name=CHM13_chrY_T0002090;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002090:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451775	62452572	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002090;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002090;transcript_name=CHM13_chrY_T0002090;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002090:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62452573	62452659	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002090;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002090;transcript_name=CHM13_chrY_T0002090;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002090:3;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62449387	62452767	1000	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002091;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_G0000811;transcript_name=CHM13_chrY_T0002091;gene_name=ENSG00000310542;ID=CHM13_chrY_T0002091;Name=ENSG00000310542
CHM13_chrY	CAT	exon	62449387	62450559	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002091;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002091;transcript_name=CHM13_chrY_T0002091;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002091:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62450560	62451086	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002091;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002091;transcript_name=CHM13_chrY_T0002091;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002091:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451087	62451171	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002091;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002091;transcript_name=CHM13_chrY_T0002091;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002091:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451172	62451556	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002091;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002091;transcript_name=CHM13_chrY_T0002091;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002091:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451557	62451774	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002091;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002091;transcript_name=CHM13_chrY_T0002091;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002091:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451775	62452572	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002091;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002091;transcript_name=CHM13_chrY_T0002091;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002091:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62452573	62452767	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002091;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002091;transcript_name=CHM13_chrY_T0002091;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002091:3;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62449387	62452800	1000	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002092;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_G0000811;transcript_name=CHM13_chrY_T0002092;gene_name=ENSG00000310542;ID=CHM13_chrY_T0002092;Name=ENSG00000310542
CHM13_chrY	CAT	exon	62449387	62449520	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002092;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002092;transcript_name=CHM13_chrY_T0002092;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002092:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62449521	62450107	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002092;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002092;transcript_name=CHM13_chrY_T0002092;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002092:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62450108	62450331	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002092;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002092;transcript_name=CHM13_chrY_T0002092;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002092:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62450332	62451086	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002092;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002092;transcript_name=CHM13_chrY_T0002092;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002092:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451087	62451171	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002092;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002092;transcript_name=CHM13_chrY_T0002092;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002092:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451172	62451556	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002092;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002092;transcript_name=CHM13_chrY_T0002092;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002092:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451557	62451774	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002092;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002092;transcript_name=CHM13_chrY_T0002092;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002092:3;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451775	62452763	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002092;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002092;transcript_name=CHM13_chrY_T0002092;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002092:3;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62452764	62452800	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002092;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002092;transcript_name=CHM13_chrY_T0002092;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002092:4;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62449389	62452840	1000	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002093;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_G0000811;transcript_name=CHM13_chrY_T0002093;gene_name=ENSG00000310542;ID=CHM13_chrY_T0002093;Name=ENSG00000310542
CHM13_chrY	CAT	exon	62449389	62450331	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002093;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002093;transcript_name=CHM13_chrY_T0002093;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002093:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62450332	62451086	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002093;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002093;transcript_name=CHM13_chrY_T0002093;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002093:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451087	62451171	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002093;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002093;transcript_name=CHM13_chrY_T0002093;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002093:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451172	62451556	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002093;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002093;transcript_name=CHM13_chrY_T0002093;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002093:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451557	62451774	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002093;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002093;transcript_name=CHM13_chrY_T0002093;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002093:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451775	62452763	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002093;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002093;transcript_name=CHM13_chrY_T0002093;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002093:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62452764	62452840	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002093;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002093;transcript_name=CHM13_chrY_T0002093;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002093:3;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62449390	62452680	1000	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002094;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_G0000811;transcript_name=CHM13_chrY_T0002094;gene_name=ENSG00000310542;ID=CHM13_chrY_T0002094;Name=ENSG00000310542
CHM13_chrY	CAT	exon	62449390	62450219	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002094;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002094;transcript_name=CHM13_chrY_T0002094;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002094:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62450220	62451086	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002094;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002094;transcript_name=CHM13_chrY_T0002094;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002094:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451087	62451171	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002094;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002094;transcript_name=CHM13_chrY_T0002094;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002094:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451172	62451556	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002094;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002094;transcript_name=CHM13_chrY_T0002094;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002094:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451557	62451774	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002094;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002094;transcript_name=CHM13_chrY_T0002094;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002094:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451775	62452572	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002094;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002094;transcript_name=CHM13_chrY_T0002094;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002094:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62452573	62452680	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002094;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002094;transcript_name=CHM13_chrY_T0002094;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002094:3;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62450129	62452794	1000	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002096;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_G0000811;transcript_name=CHM13_chrY_T0002096;gene_name=ENSG00000310542;ID=CHM13_chrY_T0002096;Name=ENSG00000310542
CHM13_chrY	CAT	exon	62450129	62450331	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002096;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002096;transcript_name=CHM13_chrY_T0002096;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002096:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62450332	62451086	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002096;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002096;transcript_name=CHM13_chrY_T0002096;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002096:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451087	62451171	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002096;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002096;transcript_name=CHM13_chrY_T0002096;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002096:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451172	62451556	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002096;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002096;transcript_name=CHM13_chrY_T0002096;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002096:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451557	62451774	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002096;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002096;transcript_name=CHM13_chrY_T0002096;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002096:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451775	62452572	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002096;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002096;transcript_name=CHM13_chrY_T0002096;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002096:2;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62452573	62452794	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002096;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002096;transcript_name=CHM13_chrY_T0002096;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002096:3;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	transcript	62451113	62451937	1000	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002097;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_G0000811;transcript_name=CHM13_chrY_T0002097;gene_name=ENSG00000310542;ID=CHM13_chrY_T0002097;Name=ENSG00000310542
CHM13_chrY	CAT	exon	62451113	62451171	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002097;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002097;transcript_name=CHM13_chrY_T0002097;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002097:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451172	62451556	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002097;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002097;transcript_name=CHM13_chrY_T0002097;gene_name=ENSG00000310542;ID=intron:CHM13_chrY_T0002097:0;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451557	62451937	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=CHM13_chrY_T0002097;gene_id=CHM13_chrY_G0000811;Parent=CHM13_chrY_T0002097;transcript_name=CHM13_chrY_T0002097;gene_name=ENSG00000310542;ID=exon:CHM13_chrY_T0002097:1;Name=ENSG00000310542;rna_support=False;reference_support=False
CHM13_chrY	CAT	gene	62449390	62451604	.	-	.	source_gene_common_name=DDX11L16;source_gene=ENSG00000292371.1;gene_id=CHM13_chrY_G0000812;gene_biotype=unprocessed_pseudogene;gene_name=DDX11L16;gene_sources=liftoff;ID=CHM13_chrY_G0000812;Name=DDX11L16
CHM13_chrY	CAT	transcript	62449390	62451604	1000	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=CHM13_chrY_T0002095;gene_id=CHM13_chrY_G0000812;Parent=CHM13_chrY_G0000812;transcript_name=CHM13_chrY_T0002095;gene_name=DDX11L16;ID=CHM13_chrY_T0002095;Name=DDX11L16
CHM13_chrY	CAT	exon	62449390	62450331	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=CHM13_chrY_T0002095;gene_id=CHM13_chrY_G0000812;Parent=CHM13_chrY_T0002095;transcript_name=CHM13_chrY_T0002095;gene_name=DDX11L16;ID=exon:CHM13_chrY_T0002095:0;Name=DDX11L16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62450332	62450409	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=CHM13_chrY_T0002095;gene_id=CHM13_chrY_G0000812;Parent=CHM13_chrY_T0002095;transcript_name=CHM13_chrY_T0002095;gene_name=DDX11L16;ID=intron:CHM13_chrY_T0002095:0;Name=DDX11L16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62450410	62450563	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=CHM13_chrY_T0002095;gene_id=CHM13_chrY_G0000812;Parent=CHM13_chrY_T0002095;transcript_name=CHM13_chrY_T0002095;gene_name=DDX11L16;ID=exon:CHM13_chrY_T0002095:1;Name=DDX11L16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62450564	62450731	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=CHM13_chrY_T0002095;gene_id=CHM13_chrY_G0000812;Parent=CHM13_chrY_T0002095;transcript_name=CHM13_chrY_T0002095;gene_name=DDX11L16;ID=intron:CHM13_chrY_T0002095:1;Name=DDX11L16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62450732	62450809	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=CHM13_chrY_T0002095;gene_id=CHM13_chrY_G0000812;Parent=CHM13_chrY_T0002095;transcript_name=CHM13_chrY_T0002095;gene_name=DDX11L16;ID=exon:CHM13_chrY_T0002095:2;Name=DDX11L16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62450810	62451086	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=CHM13_chrY_T0002095;gene_id=CHM13_chrY_G0000812;Parent=CHM13_chrY_T0002095;transcript_name=CHM13_chrY_T0002095;gene_name=DDX11L16;ID=intron:CHM13_chrY_T0002095:2;Name=DDX11L16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451087	62451171	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=CHM13_chrY_T0002095;gene_id=CHM13_chrY_G0000812;Parent=CHM13_chrY_T0002095;transcript_name=CHM13_chrY_T0002095;gene_name=DDX11L16;ID=exon:CHM13_chrY_T0002095:3;Name=DDX11L16;rna_support=False;reference_support=False
CHM13_chrY	CAT	intron	62451172	62451556	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=CHM13_chrY_T0002095;gene_id=CHM13_chrY_G0000812;Parent=CHM13_chrY_T0002095;transcript_name=CHM13_chrY_T0002095;gene_name=DDX11L16;ID=intron:CHM13_chrY_T0002095:3;Name=DDX11L16;rna_support=False;reference_support=False
CHM13_chrY	CAT	exon	62451557	62451604	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=CHM13_chrY_T0002095;gene_id=CHM13_chrY_G0000812;Parent=CHM13_chrY_T0002095;transcript_name=CHM13_chrY_T0002095;gene_name=DDX11L16;ID=exon:CHM13_chrY_T0002095:4;Name=DDX11L16;rna_support=False;reference_support=False